Metagenome Family F093425

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F093425
Family Type	Metagenome
Number of Sequences	106
Average Sequence Length	72 residues
Representative Sequence	MAKQAISVTLDSDNLTWLKGRAGAAGLRSVSELLDQLVTAARDSGRVGPSRSVVGTIDIDANDPLLEGADQ
Number of Associated Samples	95
Number of Associated Scaffolds	106

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	7.55 %
% of genes near scaffold ends (potentially truncated)	99.06 %
% of genes from short scaffolds (< 2000 bps)	96.23 %
Associated GOLD sequencing projects	90
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.51

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (90.566 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (7.547 % of family members)
Environment Ontology (ENVO)	Unclassified (41.509 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (58.491 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 30.30% β-sheet: 0.00% Coil/Unstructured: 69.70%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.51
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.51
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF02133	Transp_cyt_pur	51.89
PF00753	Lactamase_B	4.72
PF02687	FtsX	2.83
PF12706	Lactamase_B_2	2.83
PF00330	Aconitase	1.89
PF03965	Penicillinase_R	0.94
PF02631	RecX	0.94
PF07969	Amidohydro_3	0.94
PF08388	GIIM	0.94
PF01048	PNP_UDP_1	0.94
PF00112	Peptidase_C1	0.94
PF12704	MacB_PCD	0.94

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG0775	Nucleoside phosphorylase/nucleosidase, includes 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase MtnN and futalosine hydrolase MqnB	Nucleotide transport and metabolism [F]	0.94
COG0813	Purine-nucleoside phosphorylase	Nucleotide transport and metabolism [F]	0.94
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.94
COG2137	SOS response regulatory protein OraA/RecX, interacts with RecA	Posttranslational modification, protein turnover, chaperones [O]	0.94
COG2820	Uridine phosphorylase	Nucleotide transport and metabolism [F]	0.94
COG3682	Transcriptional regulator, CopY/TcrY family	Transcription [K]	0.94

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	91.51 %
Unclassified	root	N/A	8.49 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	91.51 %
Unclassified	root	N/A	8.49 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	90.57 %
Unclassified	root	N/A	8.49 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.94 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	66.04 %
Unclassified	root	N/A	8.49 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.89 %
Sar	clade	All Organisms → cellular organisms → Eukaryota → Sar	0.94 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.94 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	50.94 %
Unclassified	root	N/A	8.49 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.89 %
Alveolata	clade	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata	0.94 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.94 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	50.94 %
Unclassified	root	N/A	8.49 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	0.94 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.94 %
Dinophyceae	class	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	0.94 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	50.94 %
Unclassified	root	N/A	8.49 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	0.94 %
Suessiales	order	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	0.94 %
Xanthomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	0.94 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	50.94 %
Unclassified	root	N/A	8.49 %
Symbiodiniaceae	family	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae	0.94 %
Arenimonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Arenimonas	0.94 %
Syntrophomonadaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Syntrophomonadaceae	0.94 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	50.94 %
Unclassified	root	N/A	8.49 %
unclassified Syntrophomonadaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Syntrophomonadaceae → unclassified Syntrophomonadaceae	0.94 %
unclassified Arenimonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Arenimonas → unclassified Arenimonas	0.94 %
Symbiodinium	genus	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	0.94 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	50.94 %
Unclassified	root	N/A	8.49 %
unclassified Symbiodinium	no rank	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → unclassified Symbiodinium	0.94 %
Arenimonas sp. SCN 70-307	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Arenimonas → unclassified Arenimonas → Arenimonas sp. SCN 70-307	0.94 %
Syntrophomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Syntrophomonadaceae → unclassified Syntrophomonadaceae → Syntrophomonadaceae bacterium	0.94 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	50.94 %
Unclassified	root	N/A	8.49 %
Symbiodinium sp. KB8	species	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → unclassified Symbiodinium → Symbiodinium sp. KB8	0.94 %
Arenimonas sp. SCN 70-307	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Arenimonas → unclassified Arenimonas → Arenimonas sp. SCN 70-307	0.94 %
Syntrophomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Syntrophomonadaceae → unclassified Syntrophomonadaceae → Syntrophomonadaceae bacterium	0.94 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004479\|Ga0062595_101337960	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	648	Open in IMG/M
3300005175\|Ga0066673_10338571	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	878	Open in IMG/M
3300005186\|Ga0066676_10221791	All Organisms → cellular organisms → Bacteria	1224	Open in IMG/M
3300005334\|Ga0068869_101555678	All Organisms → cellular organisms → Bacteria	588	Open in IMG/M
3300005335\|Ga0070666_11293288	All Organisms → cellular organisms → Bacteria → Acidobacteria	544	Open in IMG/M
3300005338\|Ga0068868_100248970	All Organisms → cellular organisms → Bacteria	1495	Open in IMG/M
3300005338\|Ga0068868_102218839	Not Available	523	Open in IMG/M
3300005340\|Ga0070689_100530856	All Organisms → cellular organisms → Bacteria	1012	Open in IMG/M
3300005347\|Ga0070668_100069622	All Organisms → cellular organisms → Bacteria	2737	Open in IMG/M
3300005347\|Ga0070668_101301374	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → unclassified Symbiodinium → Symbiodinium sp. KB8	661	Open in IMG/M
3300005353\|Ga0070669_101433164	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	600	Open in IMG/M
3300005356\|Ga0070674_100982359	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	740	Open in IMG/M
3300005356\|Ga0070674_101573148	All Organisms → cellular organisms → Bacteria → Acidobacteria	592	Open in IMG/M
3300005440\|Ga0070705_100228525	All Organisms → cellular organisms → Bacteria	1293	Open in IMG/M
3300005466\|Ga0070685_10564687	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	814	Open in IMG/M
3300005467\|Ga0070706_101957897	All Organisms → cellular organisms → Bacteria → Acidobacteria	531	Open in IMG/M
3300005543\|Ga0070672_102006848	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	521	Open in IMG/M
3300005544\|Ga0070686_100458315	All Organisms → cellular organisms → Bacteria	982	Open in IMG/M
3300005544\|Ga0070686_101699080	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	536	Open in IMG/M
3300005559\|Ga0066700_10576362	All Organisms → cellular organisms → Bacteria	785	Open in IMG/M
3300005617\|Ga0068859_100221044	All Organisms → cellular organisms → Bacteria	1982	Open in IMG/M
3300005617\|Ga0068859_101458268	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	755	Open in IMG/M
3300005764\|Ga0066903_100067229	All Organisms → cellular organisms → Bacteria	4546	Open in IMG/M
3300005834\|Ga0068851_10372169	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	835	Open in IMG/M
3300005841\|Ga0068863_101233788	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	754	Open in IMG/M
3300005843\|Ga0068860_102442233	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	542	Open in IMG/M
3300005937\|Ga0081455_10539380	Not Available	774	Open in IMG/M
3300006028\|Ga0070717_12053377	All Organisms → cellular organisms → Bacteria → Acidobacteria	515	Open in IMG/M
3300006852\|Ga0075433_10667908	All Organisms → cellular organisms → Bacteria	911	Open in IMG/M
3300006880\|Ga0075429_101863634	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	521	Open in IMG/M
3300006904\|Ga0075424_100296310	All Organisms → cellular organisms → Bacteria	1722	Open in IMG/M
3300006914\|Ga0075436_100317599	All Organisms → cellular organisms → Bacteria	1119	Open in IMG/M
3300009012\|Ga0066710_103551480	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	589	Open in IMG/M
3300009147\|Ga0114129_13504702	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	501	Open in IMG/M
3300009162\|Ga0075423_10989714	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	893	Open in IMG/M
3300009681\|Ga0116174_10502446	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	552	Open in IMG/M
3300010036\|Ga0126305_10914864	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	599	Open in IMG/M
3300010159\|Ga0099796_10434943	All Organisms → cellular organisms → Bacteria → Acidobacteria	581	Open in IMG/M
3300010336\|Ga0134071_10632638	All Organisms → cellular organisms → Bacteria → Acidobacteria	562	Open in IMG/M
3300010342\|Ga0116252_10454641	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	730	Open in IMG/M
3300010375\|Ga0105239_12240514	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	635	Open in IMG/M
3300010397\|Ga0134124_10498648	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1177	Open in IMG/M
3300010399\|Ga0134127_12914172	All Organisms → cellular organisms → Bacteria	557	Open in IMG/M
3300010400\|Ga0134122_11505692	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	692	Open in IMG/M
3300010400\|Ga0134122_12102139	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	606	Open in IMG/M
3300010400\|Ga0134122_13045393	All Organisms → cellular organisms → Bacteria → Acidobacteria	523	Open in IMG/M
3300010400\|Ga0134122_13340121	All Organisms → cellular organisms → Bacteria → Acidobacteria	505	Open in IMG/M
3300010403\|Ga0134123_12033095	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	633	Open in IMG/M
3300011444\|Ga0137463_1071988	All Organisms → cellular organisms → Bacteria	1296	Open in IMG/M
3300012201\|Ga0137365_10100986	All Organisms → cellular organisms → Bacteria	2171	Open in IMG/M
3300012206\|Ga0137380_11329817	Not Available	603	Open in IMG/M
3300012350\|Ga0137372_10753550	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	701	Open in IMG/M
3300012355\|Ga0137369_10729572	All Organisms → cellular organisms → Bacteria → Acidobacteria	680	Open in IMG/M
3300012685\|Ga0137397_10708575	All Organisms → cellular organisms → Bacteria → Acidobacteria	748	Open in IMG/M
3300012922\|Ga0137394_11293544	All Organisms → cellular organisms → Bacteria → Acidobacteria	592	Open in IMG/M
3300013296\|Ga0157374_12716650	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	523	Open in IMG/M
3300013297\|Ga0157378_12427858	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	576	Open in IMG/M
3300014166\|Ga0134079_10742964	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	505	Open in IMG/M
3300014745\|Ga0157377_10334445	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1011	Open in IMG/M
3300015241\|Ga0137418_11206700	Not Available	532	Open in IMG/M
3300015372\|Ga0132256_102425378	Not Available	627	Open in IMG/M
3300015373\|Ga0132257_104011585	All Organisms → cellular organisms → Bacteria → Acidobacteria	535	Open in IMG/M
3300015374\|Ga0132255_102057813	Not Available	870	Open in IMG/M
3300016341\|Ga0182035_11903192	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	540	Open in IMG/M
3300017789\|Ga0136617_10119974	All Organisms → cellular organisms → Bacteria → Acidobacteria	2264	Open in IMG/M
3300017974\|Ga0187777_10851904	All Organisms → cellular organisms → Bacteria → Acidobacteria	653	Open in IMG/M
3300018063\|Ga0184637_10511408	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	696	Open in IMG/M
3300018064\|Ga0187773_10577239	All Organisms → cellular organisms → Bacteria	683	Open in IMG/M
3300018067\|Ga0184611_1083621	All Organisms → cellular organisms → Bacteria	1097	Open in IMG/M
3300018432\|Ga0190275_10619108	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1132	Open in IMG/M
3300018468\|Ga0066662_12630132	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	532	Open in IMG/M
3300019890\|Ga0193728_1217487	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	790	Open in IMG/M
3300020003\|Ga0193739_1114726	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	672	Open in IMG/M
3300020003\|Ga0193739_1133948	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	606	Open in IMG/M
3300021080\|Ga0210382_10036368	All Organisms → cellular organisms → Bacteria	1878	Open in IMG/M
3300021170\|Ga0210400_11360045	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	567	Open in IMG/M
3300025315\|Ga0207697_10358036	Not Available	648	Open in IMG/M
3300025315\|Ga0207697_10458333	All Organisms → cellular organisms → Bacteria → Acidobacteria	565	Open in IMG/M
3300025703\|Ga0208357_1180273	All Organisms → cellular organisms → Bacteria → Acidobacteria	576	Open in IMG/M
3300025708\|Ga0209201_1187592	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	644	Open in IMG/M
3300025730\|Ga0209606_1052059	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Arenimonas → unclassified Arenimonas → Arenimonas sp. SCN 70-307	1806	Open in IMG/M
3300025918\|Ga0207662_10715260	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	702	Open in IMG/M
3300025926\|Ga0207659_10155478	All Organisms → cellular organisms → Bacteria	1790	Open in IMG/M
3300025931\|Ga0207644_10623021	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	897	Open in IMG/M
3300025936\|Ga0207670_10558844	All Organisms → cellular organisms → Bacteria	936	Open in IMG/M
3300025940\|Ga0207691_11128700	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	651	Open in IMG/M
3300025940\|Ga0207691_11151665	All Organisms → cellular organisms → Bacteria	644	Open in IMG/M
3300025941\|Ga0207711_12133125	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	503	Open in IMG/M
3300026023\|Ga0207677_10703965	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	896	Open in IMG/M
3300026035\|Ga0207703_11336165	Not Available	689	Open in IMG/M
3300026088\|Ga0207641_10436953	Not Available	1263	Open in IMG/M
3300026095\|Ga0207676_11948277	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	586	Open in IMG/M
3300026142\|Ga0207698_10515511	All Organisms → cellular organisms → Bacteria	1166	Open in IMG/M
3300026316\|Ga0209155_1179239	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Syntrophomonadaceae → unclassified Syntrophomonadaceae → Syntrophomonadaceae bacterium	685	Open in IMG/M
3300027874\|Ga0209465_10556519	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	570	Open in IMG/M
3300027880\|Ga0209481_10285585	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	835	Open in IMG/M
3300027909\|Ga0209382_11473908	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	679	Open in IMG/M
3300028380\|Ga0268265_11456261	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	688	Open in IMG/M
3300031226\|Ga0307497_10393709	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	660	Open in IMG/M
3300031562\|Ga0310886_10581697	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	685	Open in IMG/M
3300031716\|Ga0310813_11285505	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	676	Open in IMG/M
3300031799\|Ga0318565_10595649	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	531	Open in IMG/M
3300031858\|Ga0310892_10605984	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	742	Open in IMG/M
3300032018\|Ga0315272_10326810	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	748	Open in IMG/M
3300032122\|Ga0310895_10325284	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	734	Open in IMG/M
3300032421\|Ga0310812_10244713	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	788	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	54.72%
Host-Associated	Host-Associated	41.51%
Engineered	Engineered	3.77%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	49.06%
Plants	Host-Associated → Plants	41.51%
Aquatic	Environmental → Aquatic	5.66%
Wastewater	Engineered → Wastewater	3.77%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	49.06%
Rhizosphere	Host-Associated → Plants → Rhizosphere	23.58%
Rhizoplane	Host-Associated → Plants → Rhizoplane	17.92%
Anaerobic Digestor	Engineered → Wastewater → Anaerobic Digestor	3.77%
Freshwater	Environmental → Aquatic → Freshwater	2.83%
Sediment	Environmental → Aquatic → Sediment	2.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	34.91%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	16.04%
Loam	Environmental → Terrestrial → Soil → Loam	12.26%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	12.26%
Soil	Host-Associated → Plants → Rhizosphere → Soil	11.32%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified	3.77%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.83%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.89%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.94%
Lake	Environmental → Aquatic → Freshwater → Lake	0.94%
Ice	Environmental → Aquatic → Freshwater → Ice	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.58%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	16.04%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	12.26%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	11.32%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.49%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.77%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified	3.77%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.83%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.83%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.83%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.89%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.89%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.89%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.94%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.94%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.94%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.94%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.94%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.55%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	7.55%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	7.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.60%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	6.60%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	5.66%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	5.66%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	4.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.77%
Anaerobic Digestor Sludge	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge	3.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.83%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.83%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.89%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.89%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.89%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.89%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.89%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.89%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.89%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.89%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.94%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.94%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	0.94%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.94%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.94%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.94%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.94%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.94%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.94%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009681	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC087_MetaG	Engineered	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010342	AD_JPNAca1	Engineered	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011444	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT800_2	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300017789	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ322 (21.06)	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300018067	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019890	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1	Environmental	Open in IMG/M
3300020003	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a2	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025703	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F52-2 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025708	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC055_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025730	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC057_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026316	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300032018	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_middle	Environmental	Open in IMG/M
3300032122	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4	Environmental	Open in IMG/M
3300032421	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062595_1013379601	3300004479	Soil	MPKQAISITLEADNVTWLKGRAGAAGLRSVSELLDQLVTAARESGAGGRTTSVVGTIDIDPGDPLLEHADEAI
Ga0066673_103385712	3300005175	Soil	MAKRAISVTLDADNLMWLKARTGAARLRSVSELLDQLVTVARESGRIGPSQSVVGTIDIDAS
Ga0066676_102217912	3300005186	Soil	MNTMAKQAISVTLEADNLTWLKGRAGAAGLRSVSELLDRLVRAARESGRIGPPQSVVGTIDIDASDPLLEG
Ga0068869_1015556782	3300005334	Miscanthus Rhizosphere	MKYSQSISYEHSMGKQAISVTLDADNITWLKGRAGAAGLRSVSELLDQLVSAARQSGRIGPSRSVIGTIDIDPN
Ga0070666_112932882	3300005335	Switchgrass Rhizosphere	MPKQAISITLEADNVTWLKGRAGATGLRSVSELLDQLVTAARESGGGGRTTSVVGTIDIDPGDPLLERA
Ga0068868_1002489701	3300005338	Miscanthus Rhizosphere	MAKQAISVTLKADNLTWLKGRAGAAGLRSVSELLDQLVTAARASGRVGPSRSVVGTIDLDASDPWLEKADEAVRTMFDTS
Ga0068868_1022188392	3300005338	Miscanthus Rhizosphere	MPAKHAISITLDSENITWLKGRAGATGVRSVSELVDQLVTAARRGGRVGPSRSVVGTVDIDP
Ga0070689_1005308562	3300005340	Switchgrass Rhizosphere	MPKQAISITLEADNVTWLKGRAGATGLRSVSELLDQLVTAARESGGGGRTTSVVGTIDIDPGDPLL
Ga0070668_1000696223	3300005347	Switchgrass Rhizosphere	MAKQAISVTLDSDNLTWLKGRAGAAGLRSVSELLDQLVTAARDSGRVGPSRSVVGTIDIDANDPLLEGADQAIRGLYET
Ga0070668_1013013742	3300005347	Switchgrass Rhizosphere	MSGKQAISVTLGADNVTWLKGRAGAGGVRSVSEFLDQLVTAARQGGRVGPATSVVGTIDIDSSDPWLETADSALRSIYETALG
Ga0070669_1014331641	3300005353	Switchgrass Rhizosphere	MAKQAISVTLDSDNLTWLKGRAGAAGLRSVSELLDQLVTAARDSGRVGPSRSVVGTIDIDAN
Ga0070674_1009823591	3300005356	Miscanthus Rhizosphere	MPKQAISVTLDSDNLTWLKGRAGAAGLRSVSELLDQLVSAARDSCRVGPSRSVVGTIDIDATDPLL
Ga0070674_1015731482	3300005356	Miscanthus Rhizosphere	MPRRAISVTLEADNVTWLKGRAGAAGESVSELLDQIVTSARHGAHAGTARTVVGTIDIDSSDPLLEHSDA
Ga0070705_1002285252	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MAKQAISVTLDADNLTWLKGRAGAGGVRSVSELLDQLVTAARESGRIGPSRSVVNTIDIDENDPLLETADGAVRTMFER
Ga0070685_105646872	3300005466	Switchgrass Rhizosphere	MIYDKHMSKQAISVTLEADNVTWLKGRAGAAGVRSVSELLDRLVTEARRSGDDGLARSVVGTIDIDPSDPLL
Ga0070706_1019578971	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MPKQAISVTLDADNIRWLKGRAGASGARSVSELLDRLVSAARESGNTGASTSVVGTID
Ga0070672_1020068482	3300005543	Miscanthus Rhizosphere	MAKQAISVTLDSDNLTWLKGRAGAAGLRSVSELLDQLVTAARDSGRVGPSRSVVGTIDIDANDPLLEGADQ
Ga0070686_1004583152	3300005544	Switchgrass Rhizosphere	MPKQAISITLEADNVTWLRGRAGAAGLRSVSELLDQLVTAARESGAGGRTTSVVGTIDIDPGDPLLE
Ga0070686_1016990802	3300005544	Switchgrass Rhizosphere	MSVKQAISVTLGADNVTWLKGRAGAGGVRSVSELLDQLVTAARQSGRVGPATSVVGTIDIDSS
Ga0066700_105763623	3300005559	Soil	MSKRAISVTLEIDNLVWLKGRAGATGLRSVSELVDRLVTQARTAGTSGPGRSVVGTI
Ga0068859_1002210443	3300005617	Switchgrass Rhizosphere	MAKQAISVTLDTENLTWLKGRAGAAGLRSVSELLDQLVTAARESGRIGPSRSVVGTIDIDASDPLLEGADDA
Ga0068859_1014582681	3300005617	Switchgrass Rhizosphere	MPKQAISVTLEADNLTWLKGRAGAAGLRSVSELLDQLVSAARDSGRVGPSRSVVGTIDIDATDPLLDGADDAIRG
Ga0066903_1000672291	3300005764	Tropical Forest Soil	MSKQAISVTLETENLTWLKGRVGAVGLRSISELLDQIVSAARASGLGGPSRSVVGTVDIDAGDPLLAHADAAIRALFDASL
Ga0068851_103721691	3300005834	Corn Rhizosphere	MAKQAISVTLEADNLTWLKGRAGAAGLRSVSELLDQLVTAARASGRVGPSRSVIGTIDLDASDPWLEKADEAVRTMFDTSLG
Ga0068863_1012337882	3300005841	Switchgrass Rhizosphere	MSKQAISVTLDADNLTWLKGRAGATGVRSVSELLDQIVSAARTSGQVGPSRSVVGTIDLDASDPWLE
Ga0068860_1024422332	3300005843	Switchgrass Rhizosphere	MAKQAISVTLEADNLTWLKGRAGAAGLRSVSELLDQLVTAARASGRVGPSRSVIGTIDLDASDPWLEKADEAVRTMFD
Ga0081455_105393802	3300005937	Tabebuia Heterophylla Rhizosphere	MTKQAISVTLDADNVTWLKGRAGAAGVRSVSELLDRLVTAARQSGDVGPSRSVVGTIDIDPGDPLLERA
Ga0070717_120533771	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MSKRAISVTLDAENITWLKGRAGAAGLRSVSELLDQLVSAARSSGAAGVSKSVVGTIDIDAADPALLHADDAVSALF
Ga0075433_106679081	3300006852	Populus Rhizosphere	MAKQAISVTLDAANVTWLKGRAGAGGVRSVSELLDQLVTAARKEGHAPVARSVVGT
Ga0075429_1018636341	3300006880	Populus Rhizosphere	MRKQAISVTLEADNVTWLKGRAVAAGLRSVSELLDQLVAGARQSGHTGPSRSVVGTIDIDPANPD
Ga0075424_1002963101	3300006904	Populus Rhizosphere	MAKHAISVTLDVDNLTWLKGRAGAAGVRSVSELLDQLVTAARASGQGGPSRSVVGTIDVDAGDP
Ga0075436_1003175991	3300006914	Populus Rhizosphere	MIYDDYMNKRPITVTLGADNVTWLKGRAGAAGARSVSDLLDQLVTAARRSGQVGPSKSVVGTIDI
Ga0066710_1035514801	3300009012	Grasslands Soil	MSRQAISVTLDADNVTWLRGRVRAAGARSLSELVDRLVTSARESGEVGPSRSVAGTIDVDAADPLLKRADA
Ga0114129_135047022	3300009147	Populus Rhizosphere	MPKQAISITLEADNVTWLKGRAGAAGLRSVSELLDQLVTAARESGGGGPTTSVVGTIDIDPGDPLLERADEAIGALFDASL
Ga0075423_109897141	3300009162	Populus Rhizosphere	MTKGKQAISVTLEADNLTWLKGRVAATGVRSVSELLDQLVGAARESGHLGPPKSVAGTIDIDAADPMLDHADAAV
Ga0116174_105024461	3300009681	Anaerobic Digestor Sludge	MPKTAISVTLDVENITWLRGQVRAAGLRSVSELLDRLVSAARESGRIGPPRSVVGTIDIA
Ga0126305_109148641	3300010036	Serpentine Soil	MPKQAISVTLDADNLTWLKGRAGAAGLRSVSELLDQLVTAARDSGRVGPSRSVVGTIDIDANDPLLEGADESIRGIYDA
Ga0099796_104349431	3300010159	Vadose Zone Soil	MAKQAISVTLDAENLTWLKGRAGASGIRSVSELLDQIVSAARASGHVGASRSVVGTIDIDPSDPSLDHADAALRTLFDASLRR
Ga0134071_106326381	3300010336	Grasslands Soil	MPKQAISITLEADNVTWLKGRAGAAGLRSVSELLDQLVTAARESGGGAHTTSVVGTIDIDPGDPLLERADEAIVALFD
Ga0116252_104546411	3300010342	Anaerobic Digestor Sludge	MPKTAISVTLDVENITWLRGQVRAAGLRSVSELLDRLVSAARESGRIGPPRSVVGTIDIAASDPLLEGADAAVRKQFDGV
Ga0105239_122405141	3300010375	Corn Rhizosphere	MAKQAISVTLDADNLTWLKGRAGAAGLRSVSELLDQLVTAARETGRIGPSRSVVGTIDIDTSDPL
Ga0134124_104986482	3300010397	Terrestrial Soil	MAKQAISVTLKADNLTWLKGRAGAAGLRSVSELLDQLVTAARASGRVGPSRSVVGTIDLDASDPWLEKAD
Ga0134127_129141721	3300010399	Terrestrial Soil	MSAKQAISVTLGADNVTWLKGRAGAGGVRSVSEFLDQLVTAARQGGRVGPATSVVGTIDIDSSDPLLETADAALRSIYET
Ga0134122_115056922	3300010400	Terrestrial Soil	MPKQAISVTLEADNLTWLKGRAGAAGLRSVSELLDQLVRAARASGHAGPSRSVVGTIDVDAS
Ga0134122_121021392	3300010400	Terrestrial Soil	MAKQAISVTLDADNLTWLKGKAGAGGVRSVSELLDQLVTAARESGRIGPSRSVVNTIDIDENDPLLET
Ga0134122_130453932	3300010400	Terrestrial Soil	MAKQAISITLEADNVTWLKGRAGAAGLRSVSELLNQLVTAARESGGGGRTTSVVGTIDIDPGDPLLERADEAIGALFD
Ga0134122_133401211	3300010400	Terrestrial Soil	MAKQPISVTLEADNLMWLKGRVGATGLRSVSELLDRLVTQARSSGAPAAMRSVVGTIDVDPTDPLMEKSDDVVRGLFEASLGR
Ga0134123_120330952	3300010403	Terrestrial Soil	MAKQAISVTLDSDNLTWLKGRAGAAGLRSVSELLDQLVTAARDSGRVGPSRSVVGTIDIDANDPLLEGADQAIRGLYETALRLIAE
Ga0137463_10719881	3300011444	Soil	MAKQAISITLDADNVTWLKGRAGAAGVRSVSELLDQLVTAARESGGGGRTTSVVGTIDID
Ga0137365_101009861	3300012201	Vadose Zone Soil	MPKQAISITLEADNVIWLKGRAGAAGLRSVSELLDQLVTAARESGGAAHTTSVVGTIDIDPGDPLLERADEAV
Ga0137380_113298173	3300012206	Vadose Zone Soil	MINRQAISVTLQRDNVTWLKGRADTAGCKSVSEFLDRLVSAARTRGMIISPRSVVGTIEIDPS
Ga0137372_107535501	3300012350	Vadose Zone Soil	MSKQAISVTLDADNVTWLKGRAGAAGVRSVSELVDRLVTAARQAGHVGPSRSVVGTIDVDPADPLLERADQAVRH
Ga0137369_107295722	3300012355	Vadose Zone Soil	MAKQAISITLDSDNITWLKGRAGALGARSVSDLLDQLVSAARDAGTSGPSTSVIGTIDIDAS
Ga0137397_107085751	3300012685	Vadose Zone Soil	MAKQAISVTLEADNITWLKGRIGAAAARSVSELLDQLITTARQSRHPGPSRSVVGTVDIDPSDPLLAHAAEVVRAMVDKSSGKPLM
Ga0137394_112935442	3300012922	Vadose Zone Soil	VTLDADNLTWLKGRVGATGLRSVSALLDRLVTQARTSGAVGAMRSVIGTIDVDPT
Ga0157374_127166501	3300013296	Miscanthus Rhizosphere	MSKQAISVTLDADNLTWLKGRAGATGVRSVSELLDQIVSAARTSGQVGPSRSVVGTIDLDASDPGLEGADEAVRG
Ga0157378_124278582	3300013297	Miscanthus Rhizosphere	MPKQAISVTLEADNLTWLKGRAGAAGLRSVSELLDQLVRAARASGHTGPSRSVVGTIDVDASDPWLEGADNALRD
Ga0134079_107429641	3300014166	Grasslands Soil	MPKQAISITLEADNVTWLKGRAGAAGLRSVSELLDQLVTAARESGAGGHTTSVVGTIDIDAGDPLLEHADEAIGAMF*
Ga0157377_103344451	3300014745	Miscanthus Rhizosphere	MGKQAISVTLDADNLMWLKGRAGAAGIRSVSELLDQIVSAARTSGQIGPSRSVVGTIDLDATDPWLEGADEA
Ga0137418_112067002	3300015241	Vadose Zone Soil	VAKRAISVTLDTANLTWLKARVGASDVRSVSELLDRLVTTARVKGSGHPATSVVGTIDIDRSDPLLLRADDALRAIYEPSL
Ga0132256_1024253782	3300015372	Arabidopsis Rhizosphere	MAKQPISVTLEADNLMWLKGRVGATGLRSVSELLDRLVPQARSSGAPAAMRSVVGTIDV
Ga0132257_1040115852	3300015373	Arabidopsis Rhizosphere	MPKQAISITLEADNVTWLKGRAGAAGLRSVSELLDQIVTAARESGGGGRTTSVVGTIDID
Ga0132255_1020578132	3300015374	Arabidopsis Rhizosphere	MGKQAISVTLTADNITWLRGRVGGSGLRSVSELIDRIVTDARQQGAHAPSRSVVGTIDVDAADPTLEQADAIVRTAFARSL
Ga0182035_119031921	3300016341	Soil	MPKQAISVTLDADNLTWLKGRASAAGARSISELLDHLVSAARSSGRVGPSRSVVGTIDIAESDPWLEGADD
Ga0136617_101199741	3300017789	Polar Desert Sand	MTRRAISVTLESDNVTWLKGRAGAEGESVSGLIDQLVISARSGNRAGPGRSVIGTIDIDDSDPLLERADETMRAAFDASLGRP
Ga0187777_108519041	3300017974	Tropical Peatland	MPGSKRAISVTLAADNITWLRARSRAPGGHSLSAFLDQLVTAARQAGHTGPSRSVIGTIDVDASDPHLEGADAAIRTLFDASV
Ga0184637_105114081	3300018063	Groundwater Sediment	MPRQAISVTLHTDNVTWLKGRAGAAGVRSVSELLDQIVTAARTAGRAVSPRSVVGTIDIDSSDPLLEGADAAVR
Ga0187773_105772391	3300018064	Tropical Peatland	MPKQAISVTIDADNLTWLKGRAAATGARSVSDLLDRLVTEARAGGAAVPVKSVVGTIDIDPGDTSL
Ga0184611_10836211	3300018067	Groundwater Sediment	MAKQAISITLDADNVTWLKGRAGAAGVRSVSELLDQLVTAARESGGGGRTTSVVGTIDIDPGDPLLERADEAIGAL
Ga0190275_106191083	3300018432	Soil	MSVKQAISVTLGADNVTWLKGRAGAGGVRSVSEFLDQLVTAARQGGRVGPAASVVGTIDIDSSAPLLETADDAVRAIYEASLGRPLVG
Ga0066662_126301321	3300018468	Grasslands Soil	MPRQAISITLDADNITWLRGRVRAAGARSLSELVDRLVTSARESGQVGPSCSVAGTIDVDAADPLLKRADAAV
Ga0193728_12174871	3300019890	Soil	MPKRAISVTLEADNLTWLKGRAGAAGLRSVSELLDQLIRAARASGHAGPSRSVVGTIDVDASDPWLEGADAALRDMVDKS
Ga0193739_11147262	3300020003	Soil	MPKQAISITLEADNLTWLKGRAGASGVRSVSELLDQLVTAAREAGGAGHATSVVGTIDIDPGDPLLER
Ga0193739_11339482	3300020003	Soil	MTKQAISVTLDADNVTWLKGRAGATGIRSVSELLDQIVLAARQSGHVGPVTSVVGTVDIDPQD
Ga0210382_100363683	3300021080	Groundwater Sediment	MGKKAISVTLETDNLVWLRARAGATGLRSVSELLDRLVTQARAAGSTGPTRSVVGTIDIAADDPLLEQADAAVRAMFAASL
Ga0210400_113600452	3300021170	Soil	MSKQAISVTLDAENLTWLKGRAGAAGLRSVSELLDQIVTAARASGRVGPSRSVVGTVDIDPGDPS
Ga0207697_103580362	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	MGKQAISVTLDADNLMWLKGRAGAAGIRSVSELLDQIVSAARTSGQIGPSRSVVGTIDLDATDPWLEGADEAVRGMFDASL
Ga0207697_104583331	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	MPKQAISVTLDVDNLTWLKGRASATGVRSVSELLDQLVSSARSSGEVGPSRSVVGTIDIAAGDPWLE
Ga0208357_11802731	3300025703	Arctic Peat Soil	MTKRAISITLDADNVTWLKGRAGAGAFRSVSHLVNRLIVEAREEGAAAGARSVVGTIDVDAADPLLSRADAAVRRLFDASIGRPP
Ga0209201_11875921	3300025708	Anaerobic Digestor Sludge	MPKTAISVTLDVENITWLRGQVRAAGLRSVSELLDRLVSAARESGRIGPPRSVVGTIDIAASDPLLEGADAAVRKQFDGVL
Ga0209606_10520591	3300025730	Anaerobic Digestor Sludge	MPKTAISVTLDVENITWLRGQVRAAGLRSVSELLDRLVSAARESGRIGPPRSVVGTIDIAASDPLLEGADAAVR
Ga0207662_107152603	3300025918	Switchgrass Rhizosphere	MIYDKHMSKQAISVTLEADNVTWLKGRAGAAGVRSVSELLDRLVTEARRSGDDGLARSVVGTIDIDPSDPLLERADEAVRYVFESSLG
Ga0207659_101554782	3300025926	Miscanthus Rhizosphere	MPRRAISVTLEADNVTWLKGRAGAAGESVSELLDQIVTSARHGGHAGTARSVVGTIDIDSSDPLLEHSDALVRAAF
Ga0207644_106230212	3300025931	Switchgrass Rhizosphere	MPKQAISVTLDVDNLTWLKGRASATGVRSVSELLDQLVSSARSSGEVGPSRSVVGTI
Ga0207670_105588442	3300025936	Switchgrass Rhizosphere	MPKQAISITLEADNVTWLKGRAGATGLRSVSELLDQLVTAARESGGGGRTTSVVGTIDIDPGDPLLE
Ga0207691_111287002	3300025940	Miscanthus Rhizosphere	MPKRAISVTLNSDNLTWLRGRAGAAGLRSVSELLDQLVTAARETGRVGPSRSVVGTIDID
Ga0207691_111516651	3300025940	Miscanthus Rhizosphere	MAKQAISVTLDSDNLTWLKGRAGAAGLRSVSELLDQLVTAARDSGRVGPSRSVVGTIDIDANDPLLEGADQA
Ga0207711_121331251	3300025941	Switchgrass Rhizosphere	MPKQAISVTLDADNLTWLKGRASATGARSVSELLDQLVAAARSSGDIGPSRSVVGTIDVDASDPWLEGADDAMRAIFQASL
Ga0207677_107039651	3300026023	Miscanthus Rhizosphere	MGKQAISVTLDADNLMWLKGRAGAAGIRSVSELLDQIVSAARTSGQIGPSRSVVGTIDLDATDPWLEGADEAVRGMFD
Ga0207703_113361651	3300026035	Switchgrass Rhizosphere	MAKQPISVTLEADNLMWLKGRVGATGLRSVSELLDRLVTQARSGGAPAAMRSVVGTIDVDPTDPLMEKSDDVVR
Ga0207641_104369531	3300026088	Switchgrass Rhizosphere	MPKQAISVTLEADNLTWLKGRAGAAGLRSVSELLDQLVRAARASGHTGPSRSVVGTIDVDASDPWLEGADNALRDLVDAS
Ga0207676_119482772	3300026095	Switchgrass Rhizosphere	MAKQAISVTLDADNLMWLKGRAGAAGIRSVSELLDQIVSAARTSGHIGPSRSVVGTIDLDASD
Ga0207698_105155111	3300026142	Corn Rhizosphere	MGKQAISVTLDADNLRWLRGRAGATGLRSVSELLDRLVTAAREGGRVGPPRSVVGTIDID
Ga0209155_11792392	3300026316	Soil	MSSKRAISVTLDADNVTWLRGRVRAAGARSLSELVDRLVTSARESGEVGPSRSVAGTIDVDAADPLLKRA
Ga0209465_105565192	3300027874	Tropical Forest Soil	MPKQAISVTLDADNLTWLKGRASAAGARSISELLDQLVRSARSSGQVGPSRSVVGTI
Ga0209481_102855851	3300027880	Populus Rhizosphere	MSKQAISVTLDADNVTWLKGRAGATGVRSVSELLDRLVTAARQSGDIGLSRSVVGTIDIDPGDPLLER
Ga0209382_114739081	3300027909	Populus Rhizosphere	MSKQAISVTLEVDNVTWLKGRAGAKGLRSVSELLDRLVTAARQSGDVGPSRSVVGTIDIDSSDPLLERAD
Ga0268265_114562611	3300028380	Switchgrass Rhizosphere	MPKRAISVTLNSDNLTWLRGRAGAAGLRSVSELLDQLVTAARETGRVGPSRSVVGTIDIDANDPLLEG
Ga0307497_103937091	3300031226	Soil	MPKQAISITLEADNVTWLKGRAGAAGLRSVSELLDQLVTAARESGAGGRTTSVIGTIDIDPGDPLLERADEDRCRWFRSP
Ga0310886_105816972	3300031562	Soil	MPKQAISITLEADNVTWLKGRAGAAGLRSVSELLDQLVTAARESGGGGRTTSVVGTIDIDPGDPLLEHADEAIGALF
Ga0310813_112855052	3300031716	Soil	MIYDKHMSKQAISVTLEADNVTWLKGRAGAAGVRSVSELLDRLVTEARRSGDDGLARSVVGTIDIDPSDPLLERADEAVRYVFESSL
Ga0318565_105956492	3300031799	Soil	MPKQAISVTLDADNLTWLKGRASAAGARSISELLDHLVSAARSSGRVGPSRSVVGTID
Ga0310892_106059841	3300031858	Soil	MSKQAISVTLDAENVTWLKGRAGATGARSVSELLDQLVTAARQSGKGAPARSVVGTIDIDPSDPLLERADEAVRTVFESSL
Ga0315272_103268102	3300032018	Sediment	MGKQAISVTLEADNLTWLKGRAGAAGVRSVSGLLDQLISAARASGQTGPSRSVVGTIDVDASDPWLEGSDDAMRSIFQASL
Ga0310895_103252841	3300032122	Soil	MIYDKHMSKQAISVTLEVDNVTWLKGRAGAKGLRSVSELLDRLVTAARQSGDVGPSRSVVGTIDIDSSDPLLERADE
Ga0310812_102447131	3300032421	Soil	MIYDKHMSKQAISVTLEADNVTWLKGRAGAAGVRSVSELLDRLVTEARRSGDDGLARS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F093425

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences