Metagenome Family F093424

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F093424
Family Type	Metagenome
Number of Sequences	106
Average Sequence Length	89 residues
Representative Sequence	MRDRIYLFVFLVGAGLLLYVGRGLIATSAYATFGLTFAGTTAAAVLGMVLYRVQLELRASRHELARKEAELNFALEVQQALFPK
Number of Associated Samples	85
Number of Associated Scaffolds	106

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	14.15 %
% of genes near scaffold ends (potentially truncated)	94.34 %
% of genes from short scaffolds (< 2000 bps)	90.57 %
Associated GOLD sequencing projects	81
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.58

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (82.075 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland (14.151 % of family members)
Environment Ontology (ENVO)	Unclassified (44.340 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (33.019 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 69.64% β-sheet: 0.00% Coil/Unstructured: 30.36%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.58
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.58
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF07690	MFS_1	14.15
PF13738	Pyr_redox_3	6.60
PF14338	Mrr_N	3.77
PF01797	Y1_Tnp	0.94
PF07927	HicA_toxin	0.94
PF02574	S-methyl_trans	0.94
PF01186	Lysyl_oxidase	0.94
PF05167	DUF711	0.94
PF04264	YceI	0.94
PF01694	Rhomboid	0.94
PF00266	Aminotran_5	0.94
PF01966	HD	0.94
PF02578	Cu-oxidase_4	0.94
PF00155	Aminotran_1_2	0.94
PF07228	SpoIIE	0.94
PF02744	GalP_UDP_tr_C	0.94
PF03795	YCII	0.94
PF12627	PolyA_pol_RNAbd	0.94
PF00196	GerE	0.94

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG0646	Methionine synthase I (cobalamin-dependent), methyltransferase domain	Amino acid transport and metabolism [E]	0.94
COG0705	Membrane-associated serine protease, rhomboid family	Posttranslational modification, protein turnover, chaperones [O]	0.94
COG1496	Copper oxidase (laccase) domain	Inorganic ion transport and metabolism [P]	0.94
COG1724	Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase family	General function prediction only [R]	0.94
COG1943	REP element-mobilizing transposase RayT	Mobilome: prophages, transposons [X]	0.94
COG2040	Homocysteine/selenocysteine methylase (S-methylmethionine-dependent)	Amino acid transport and metabolism [E]	0.94
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.94
COG2353	Polyisoprenoid-binding periplasmic protein YceI	General function prediction only [R]	0.94
COG2848	Uncharacterized conserved protein, UPF0210 family	Cell cycle control, cell division, chromosome partitioning [D]	0.94

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	82.08 %
Unclassified	root	N/A	17.92 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	82.08 %
Unclassified	root	N/A	17.92 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	82.08 %
Unclassified	root	N/A	17.92 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	59.43 %
Unclassified	root	N/A	17.92 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.89 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.94 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.94 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	19.81 %
Unclassified	root	N/A	17.92 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.89 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.94 %
Lentisphaerae	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae	0.94 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	19.81 %
Unclassified	root	N/A	17.92 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.89 %
Chloroflexia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia	0.94 %
unclassified Lentisphaerota	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → unclassified Lentisphaerota	0.94 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	19.81 %
Unclassified	root	N/A	17.92 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.89 %
Herpetosiphonales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Herpetosiphonales	0.94 %
Lentisphaerota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → unclassified Lentisphaerota → Lentisphaerota bacterium	0.94 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	19.81 %
Unclassified	root	N/A	17.92 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.89 %
Herpetosiphonaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Herpetosiphonales → Herpetosiphonaceae	0.94 %
Lentisphaerota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → unclassified Lentisphaerota → Lentisphaerota bacterium	0.94 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	19.81 %
Unclassified	root	N/A	17.92 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.89 %
Herpetosiphon	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Herpetosiphonales → Herpetosiphonaceae → Herpetosiphon	0.94 %
Lentisphaerota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → unclassified Lentisphaerota → Lentisphaerota bacterium	0.94 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	19.81 %
Unclassified	root	N/A	17.92 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.89 %
Herpetosiphon aurantiacus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Herpetosiphonales → Herpetosiphonaceae → Herpetosiphon → Herpetosiphon aurantiacus	0.94 %
Lentisphaerota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → unclassified Lentisphaerota → Lentisphaerota bacterium	0.94 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000567\|JGI12270J11330_10184947	All Organisms → cellular organisms → Bacteria → Acidobacteria	730	Open in IMG/M
3300005166\|Ga0066674_10264399	All Organisms → cellular organisms → Bacteria → Acidobacteria	813	Open in IMG/M
3300005186\|Ga0066676_10923819	All Organisms → cellular organisms → Bacteria	584	Open in IMG/M
3300005518\|Ga0070699_101361245	All Organisms → cellular organisms → Bacteria → Acidobacteria	651	Open in IMG/M
3300005518\|Ga0070699_101363300	Not Available	650	Open in IMG/M
3300005549\|Ga0070704_100686442	All Organisms → cellular organisms → Bacteria	907	Open in IMG/M
3300005552\|Ga0066701_10456920	All Organisms → cellular organisms → Bacteria → Acidobacteria	793	Open in IMG/M
3300005586\|Ga0066691_10902677	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Herpetosiphonales → Herpetosiphonaceae → Herpetosiphon → Herpetosiphon aurantiacus	520	Open in IMG/M
3300005591\|Ga0070761_10662160	All Organisms → cellular organisms → Bacteria	652	Open in IMG/M
3300006028\|Ga0070717_11543322	All Organisms → cellular organisms → Bacteria → Acidobacteria	602	Open in IMG/M
3300006034\|Ga0066656_10600438	All Organisms → cellular organisms → Bacteria	712	Open in IMG/M
3300006046\|Ga0066652_100891052	All Organisms → cellular organisms → Bacteria → Acidobacteria	849	Open in IMG/M
3300006852\|Ga0075433_11946784	Not Available	504	Open in IMG/M
3300006914\|Ga0075436_100119720	All Organisms → cellular organisms → Bacteria	1841	Open in IMG/M
3300009089\|Ga0099828_10269478	All Organisms → cellular organisms → Bacteria → Acidobacteria	1529	Open in IMG/M
3300009090\|Ga0099827_10396872	All Organisms → cellular organisms → Bacteria → Proteobacteria	1178	Open in IMG/M
3300009090\|Ga0099827_11469177	All Organisms → cellular organisms → Bacteria → Acidobacteria	593	Open in IMG/M
3300009519\|Ga0116108_1261426	Not Available	505	Open in IMG/M
3300009629\|Ga0116119_1071752	Not Available	879	Open in IMG/M
3300009643\|Ga0116110_1105244	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	955	Open in IMG/M
3300009643\|Ga0116110_1171127	Not Available	712	Open in IMG/M
3300010341\|Ga0074045_10695587	All Organisms → cellular organisms → Bacteria → Acidobacteria	646	Open in IMG/M
3300011269\|Ga0137392_10975532	All Organisms → cellular organisms → Bacteria → Acidobacteria	696	Open in IMG/M
3300011271\|Ga0137393_11490449	All Organisms → cellular organisms → Bacteria → Acidobacteria	566	Open in IMG/M
3300012201\|Ga0137365_10371344	All Organisms → cellular organisms → Bacteria → Acidobacteria	1056	Open in IMG/M
3300012209\|Ga0137379_10265727	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1627	Open in IMG/M
3300012210\|Ga0137378_11584909	All Organisms → cellular organisms → Bacteria → Acidobacteria	564	Open in IMG/M
3300012211\|Ga0137377_10715849	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → unclassified Lentisphaerota → Lentisphaerota bacterium	935	Open in IMG/M
3300012363\|Ga0137390_11426569	All Organisms → cellular organisms → Bacteria → Acidobacteria	636	Open in IMG/M
3300012931\|Ga0153915_12630499	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	588	Open in IMG/M
3300012971\|Ga0126369_13378012	Not Available	523	Open in IMG/M
3300012975\|Ga0134110_10516755	All Organisms → cellular organisms → Bacteria → Acidobacteria	545	Open in IMG/M
3300012976\|Ga0134076_10426241	Not Available	595	Open in IMG/M
3300014153\|Ga0181527_1098809	Not Available	1378	Open in IMG/M
3300014155\|Ga0181524_10222096	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	907	Open in IMG/M
3300014160\|Ga0181517_10511844	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	606	Open in IMG/M
3300014162\|Ga0181538_10746986	All Organisms → cellular organisms → Bacteria → Acidobacteria	505	Open in IMG/M
3300017823\|Ga0187818_10429106	All Organisms → cellular organisms → Bacteria → Acidobacteria	589	Open in IMG/M
3300017929\|Ga0187849_1310528	All Organisms → cellular organisms → Bacteria → Acidobacteria	588	Open in IMG/M
3300017934\|Ga0187803_10123593	All Organisms → cellular organisms → Bacteria → Acidobacteria	1017	Open in IMG/M
3300017934\|Ga0187803_10247447	All Organisms → cellular organisms → Bacteria → Acidobacteria	706	Open in IMG/M
3300017938\|Ga0187854_10024453	All Organisms → cellular organisms → Bacteria	3299	Open in IMG/M
3300017938\|Ga0187854_10424055	Not Available	557	Open in IMG/M
3300017940\|Ga0187853_10030800	All Organisms → cellular organisms → Bacteria	2870	Open in IMG/M
3300017946\|Ga0187879_10164253	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1252	Open in IMG/M
3300017955\|Ga0187817_10357387	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	932	Open in IMG/M
3300017972\|Ga0187781_10705628	Not Available	730	Open in IMG/M
3300017972\|Ga0187781_11082094	All Organisms → cellular organisms → Bacteria → Acidobacteria	588	Open in IMG/M
3300017972\|Ga0187781_11151188	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	570	Open in IMG/M
3300018016\|Ga0187880_1209326	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	880	Open in IMG/M
3300018019\|Ga0187874_10025218	All Organisms → cellular organisms → Bacteria	3032	Open in IMG/M
3300018020\|Ga0187861_10166635	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1005	Open in IMG/M
3300018024\|Ga0187881_10254695	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	734	Open in IMG/M
3300018040\|Ga0187862_10465404	All Organisms → cellular organisms → Bacteria → Acidobacteria	765	Open in IMG/M
3300018040\|Ga0187862_10913991	Not Available	501	Open in IMG/M
3300018062\|Ga0187784_10366558	All Organisms → cellular organisms → Bacteria	1166	Open in IMG/M
3300018062\|Ga0187784_10531413	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	947	Open in IMG/M
3300018086\|Ga0187769_11038692	All Organisms → cellular organisms → Bacteria → Acidobacteria	620	Open in IMG/M
3300018086\|Ga0187769_11302779	All Organisms → cellular organisms → Bacteria → Acidobacteria	549	Open in IMG/M
3300018088\|Ga0187771_10120528	All Organisms → cellular organisms → Bacteria	2132	Open in IMG/M
3300018088\|Ga0187771_10666903	All Organisms → cellular organisms → Bacteria	882	Open in IMG/M
3300018088\|Ga0187771_10763114	All Organisms → cellular organisms → Bacteria → Acidobacteria	820	Open in IMG/M
3300018088\|Ga0187771_10783339	All Organisms → cellular organisms → Bacteria	809	Open in IMG/M
3300018088\|Ga0187771_10938484	All Organisms → cellular organisms → Bacteria	734	Open in IMG/M
3300018088\|Ga0187771_11118709	Not Available	668	Open in IMG/M
3300018090\|Ga0187770_10876125	All Organisms → cellular organisms → Bacteria → Acidobacteria	720	Open in IMG/M
3300018090\|Ga0187770_11811028	All Organisms → cellular organisms → Bacteria → Acidobacteria	500	Open in IMG/M
3300018482\|Ga0066669_10812965	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	829	Open in IMG/M
3300021476\|Ga0187846_10037424	Not Available	2178	Open in IMG/M
3300021476\|Ga0187846_10198743	Not Available	840	Open in IMG/M
3300021560\|Ga0126371_13308990	Not Available	545	Open in IMG/M
3300025310\|Ga0209172_10066400	All Organisms → cellular organisms → Bacteria	2170	Open in IMG/M
3300025409\|Ga0208321_1054938	All Organisms → cellular organisms → Bacteria → Acidobacteria	587	Open in IMG/M
3300025419\|Ga0208036_1010490	Not Available	2178	Open in IMG/M
3300025442\|Ga0208034_1007413	All Organisms → cellular organisms → Bacteria	4114	Open in IMG/M
3300025453\|Ga0208455_1037901	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1074	Open in IMG/M
3300025459\|Ga0208689_1051225	All Organisms → cellular organisms → Bacteria → Acidobacteria	851	Open in IMG/M
3300025460\|Ga0208562_1055868	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	845	Open in IMG/M
3300025472\|Ga0208692_1085591	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	650	Open in IMG/M
3300025507\|Ga0208188_1086026	Not Available	726	Open in IMG/M
3300026316\|Ga0209155_1268193	Not Available	529	Open in IMG/M
3300026324\|Ga0209470_1158010	All Organisms → cellular organisms → Bacteria → Acidobacteria	992	Open in IMG/M
3300026342\|Ga0209057_1075731	All Organisms → cellular organisms → Bacteria → Acidobacteria	1445	Open in IMG/M
3300027854\|Ga0209517_10693553	Not Available	525	Open in IMG/M
3300031668\|Ga0318542_10164948	All Organisms → cellular organisms → Bacteria	1106	Open in IMG/M
3300031680\|Ga0318574_10520268	All Organisms → cellular organisms → Bacteria → Acidobacteria	697	Open in IMG/M
3300031747\|Ga0318502_10316586	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	920	Open in IMG/M
3300031777\|Ga0318543_10114255	All Organisms → cellular organisms → Bacteria	1169	Open in IMG/M
3300031781\|Ga0318547_10077718	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1853	Open in IMG/M
3300031942\|Ga0310916_10129608	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2061	Open in IMG/M
3300031945\|Ga0310913_10152939	All Organisms → cellular organisms → Bacteria	1595	Open in IMG/M
3300032160\|Ga0311301_11988852	All Organisms → cellular organisms → Bacteria	679	Open in IMG/M
3300032164\|Ga0315283_11758124	All Organisms → cellular organisms → Bacteria → Acidobacteria	625	Open in IMG/M
3300032342\|Ga0315286_10688973	All Organisms → cellular organisms → Bacteria → Proteobacteria	1045	Open in IMG/M
3300032805\|Ga0335078_10082076	All Organisms → cellular organisms → Bacteria	4694	Open in IMG/M
3300032805\|Ga0335078_10635446	All Organisms → cellular organisms → Bacteria → Acidobacteria	1338	Open in IMG/M
3300032805\|Ga0335078_12394888	All Organisms → cellular organisms → Bacteria → Acidobacteria	549	Open in IMG/M
3300032892\|Ga0335081_12266909	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	569	Open in IMG/M
3300032892\|Ga0335081_12613293	All Organisms → cellular organisms → Bacteria → Acidobacteria	518	Open in IMG/M
3300032895\|Ga0335074_11468344	All Organisms → cellular organisms → Bacteria → Acidobacteria	545	Open in IMG/M
3300033158\|Ga0335077_11303849	All Organisms → cellular organisms → Bacteria → Acidobacteria	705	Open in IMG/M
3300033158\|Ga0335077_12163908	All Organisms → cellular organisms → Bacteria → Acidobacteria	512	Open in IMG/M
3300033405\|Ga0326727_11151062	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	546	Open in IMG/M
3300033489\|Ga0299912_11009702	All Organisms → cellular organisms → Bacteria → Acidobacteria	620	Open in IMG/M
3300033977\|Ga0314861_0146726	All Organisms → cellular organisms → Bacteria → Acidobacteria	1156	Open in IMG/M
3300034091\|Ga0326724_0436670	All Organisms → cellular organisms → Bacteria → Acidobacteria	685	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.11%
Host-Associated	Host-Associated	1.89%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	65.09%
Aquatic	Environmental → Aquatic	33.02%
Plants	Host-Associated → Plants	1.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	61.32%
Freshwater	Environmental → Aquatic → Freshwater	32.08%
Peat	Environmental → Terrestrial → Peat	1.89%
Cave	Environmental → Terrestrial → Cave	1.89%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.89%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	32.08%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	30.19%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	23.58%
Loam	Environmental → Terrestrial → Soil → Loam	5.66%
Lake	Environmental → Aquatic → Freshwater → Lake	1.89%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.89%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	1.89%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.89%
Sediment	Environmental → Aquatic → Thermal Springs → Sediment	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	23.58%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.04%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	14.15%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	12.26%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.49%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	6.60%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.77%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.77%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	1.89%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.89%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	1.89%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.89%
Unclassified	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified	0.94%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.94%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.94%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.94%

Habitat	Taxonomy	Distribution
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	14.15%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	11.32%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	10.38%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	9.43%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	7.55%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	7.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.60%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	3.77%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.77%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.77%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.83%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	1.89%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.89%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.89%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.89%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	1.89%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.89%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.94%
Hot Spring Sediment	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified → Hot Spring Sediment	0.94%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.94%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.94%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.94%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.94%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.94%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009519	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_150	Environmental	Open in IMG/M
3300009629	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_100	Environmental	Open in IMG/M
3300009643	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_40	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300014153	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_60_metaG	Environmental	Open in IMG/M
3300014155	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_60_metaG	Environmental	Open in IMG/M
3300014160	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_30_metaG	Environmental	Open in IMG/M
3300014162	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaG	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017929	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_100	Environmental	Open in IMG/M
3300017934	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3	Environmental	Open in IMG/M
3300017938	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_150	Environmental	Open in IMG/M
3300017940	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018016	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_40	Environmental	Open in IMG/M
3300018019	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_150	Environmental	Open in IMG/M
3300018020	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_100	Environmental	Open in IMG/M
3300018024	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_100	Environmental	Open in IMG/M
3300018040	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025310	Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Larsen N4 metaG (SPAdes)	Environmental	Open in IMG/M
3300025409	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_150 (SPAdes)	Environmental	Open in IMG/M
3300025419	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_100 (SPAdes)	Environmental	Open in IMG/M
3300025442	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_100 (SPAdes)	Environmental	Open in IMG/M
3300025453	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_40 (SPAdes)	Environmental	Open in IMG/M
3300025459	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_150 (SPAdes)	Environmental	Open in IMG/M
3300025460	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_150 (SPAdes)	Environmental	Open in IMG/M
3300025472	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_100 (SPAdes)	Environmental	Open in IMG/M
3300025507	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_40 (SPAdes)	Environmental	Open in IMG/M
3300026316	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026342	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032164	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_0	Environmental	Open in IMG/M
3300032342	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G10_0	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental	Open in IMG/M
3300033489	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT95D214	Environmental	Open in IMG/M
3300033977	Tropical peat soil microbial communities from peatlands in Loreto, Peru - SJ75	Environmental	Open in IMG/M
3300034091	Peat soil microbial communities from McLean, Ithaca, NY, United States - MB00N	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12270J11330_101849473	3300000567	Peatlands Soil	MRDRLYLLVFLVGAGVLLYVGRGYIAMSTYATFGLTFAGTTAAAVLGLVLYRVQLELRASRHELARKEAELNFALEVQQALFPKQFPADGGLEFSAVCVPA
Ga0066674_102643992	3300005166	Soil	MRDRIYLAGFLLGSGLLLYASRSLLTKSALVTWGLTFAGTTAAATLGLALYRVHLELRASQHELARKEAELNFALEVQQAL
Ga0066676_109238192	3300005186	Soil	MRDRIYLAGFLLGSGLLLYASRSLLTKSALVTWGLTFAGTTAAATLGLALYRVQLELRASQHELARKEAELNFALEVQQALFPRQFPVDGGLEFAAVCV
Ga0070699_1013612451	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MLEKAYVSGVLLGAGLLLYLGRDLLTRSAVLTWGLSFAGTTAVGILAMALHRVLAELRASRHELARKQAELSFALEVQQALCP*
Ga0070699_1013633001	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MRDRLYLIGFLLGAGLLLYLGRNLIRESALLTTVLAFAGTTAVGVLGLALYRVQLALRTSQRELAMRQAELNFALEVQQS
Ga0070704_1006864422	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MREKAYVTGVLLGAGLLLYLGRDLLTRSAVLTWGLSFAGTTAVGILAMALHRVLAELRASRHELARKEAELNFALEVQQALFPRKFPTN
Ga0066701_104569201	3300005552	Soil	MALGDAVVIVDAEQTMRDRIFLAGFLLGSGLLLYAGRSLLTKSALVTWGLTFAGTTAAATLGLALYRVQLELRASQHELARKEAELNFALEVQQALFPRQFPVD
Ga0066691_109026771	3300005586	Soil	LMVDAEQTMRDRIYLAGFLVGSGLLLYASRSLLTKSALVTWGLTFAGTTAAATLGLALYRVQLELRASQHELARKEAELNFALEVQQALFPRQFPVDGGLEFAAVCVP
Ga0070761_106621602	3300005591	Soil	MRDKIYLASFLVGAGVLLYAGRGLLAQSAMVTWGLTFAGPTAVGVLGMALYQVQDQLRASRRELARKEAELNFAREVQRALFPRQFPLDSGLEFSAVCVPA
Ga0070717_115433221	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MRDKIYLSTFLFGAGVLLYVGRDLLEKSGVVTWGLTFGGTTAAAVLGMALYRVQFELRASRHELARKEAELNFA
Ga0066656_106004381	3300006034	Soil	MRDRIYLAGFLLGSGLLLYASRSLLTKSALVTWGLTFAGTTAAATLGLALYRVQLELRASQHELARKEAELNFALEVQQALFPRQFPVDGGLEFAAVCVPA
Ga0066652_1008910522	3300006046	Soil	MRDRIYLAGFLLGSGLLLYASRSLLTKSALVTWGLTFAGTTAAATLGLALYRVQLELRASQHELARKEAELNFAL
Ga0075433_119467842	3300006852	Populus Rhizosphere	MREKAYVSGVLLGAGLLLYLGRDLLTRSAVLTWALSFAGTTAVGILAMALHRVLAELRASRHELARKEAELNFALEVQHALFPRQ
Ga0075436_1001197201	3300006914	Populus Rhizosphere	MVQAEQTMRDRIYLAGFLLGSGLLLYASRSLLTKSALVTWGLTFAGTTAAATLGLALYRVQLELRASQHELARKEAELNFALEVQQALFPRQFPVDGGLEFAAVCV
Ga0099828_102694782	3300009089	Vadose Zone Soil	LRGEVSSFKLGAAVRDKIYLVSFLLLAGLLLYTGRGLLPNSVVVAWGLTFAGTTAAGVLGMVLYRVQLELRASRHELARKEAELSFAREIQGALFPKQFPADSGLEFAGVYVPAKGISG
Ga0099827_103968721	3300009090	Vadose Zone Soil	MREKAYVSGVLLGAGLLLYLGRDLLTRSAVLTWGLSFAGTTAVGILAMALHRVLAELRASRHELARKQAELNFALEVQKALFPRQFPAKGGLEFAAVCLPARGISGD
Ga0099827_114691771	3300009090	Vadose Zone Soil	MRDKIYLSTFLFGAGLLLYVGRDLLEKSAVVTWGLTFGGTTAAAVLGLALYRVQFELRASRHELARKEAELNFALEVQQALFPRRFPPPDTGLEFAAVCVPARGIS
Ga0116108_12614262	3300009519	Peatland	MRDRIYLLVFLVGAGLLLYVGRGFLAMSAYATFGLTFAGTTAAAVLGTVLYRVQLELRASRHELARKEAELNF
Ga0116119_10717522	3300009629	Peatland	MRDRIYLLVFLVGAGLLLYVGRGFLAMSAYATFGLTFAGTTAAAVLGTVLYRVQLELRASRHELARKEAELNFALEVQQALFP
Ga0116110_11052442	3300009643	Peatland	MRDRLYLLVFLLGAGVLLYVGRSYIAMSEYATFGLTFAGTTAAAVLGMVLYRVQLELRASRHE
Ga0116110_11711271	3300009643	Peatland	MRDRLYLLVFLVGAGVLLYVGRGYIAMSTYATFGLTFAGTTAAAVLGLVLYRVQLELRASRHELARQEAELNFALEVQQALFPKQ
Ga0074045_106955871	3300010341	Bog Forest Soil	MRDRIYLLVFLVGAGVLLYVGRGYLAMSAYATFGLTFAGTTAAAVLGMVLYRVQLELRASRHELARKEAELNFALEV*
Ga0137392_109755322	3300011269	Vadose Zone Soil	MRDKIYLSTFLFGAGLLLYVGRDLLEKSAVVTWGLTFGGTTAAAVLGLALYRVQFELRASRHELARKEAELNFALEVQQALFPRRFPPPD
Ga0137393_114904491	3300011271	Vadose Zone Soil	LRGEVSSFKLGAAVRDKIYLVSFLLLAGLLLYTGRGLLPNSVVVAWGLTFAGTTAAGVLGMVLYRVQLELRASRHELARKEAELSFA
Ga0137365_103713441	3300012201	Vadose Zone Soil	MALGDAVVIVDAEQTMRDRIYLAGFLLGSGLLLYAGRSLLTKSALVTWGLTFAGTTAAATLGMALYRVQLELRASRHELARKEAELNFA
Ga0137379_102657274	3300012209	Vadose Zone Soil	MRDRLYLSTFLVGAGALLYVGRHLLERSAVVTWGLTFGGTTAAAVLGMALYRVQFELRASRHELARKEAELNFALQVQ
Ga0137378_115849091	3300012210	Vadose Zone Soil	MALGDAVVIVDAEQTMRDRIYLAGFLLGSGLLLYASRSLLTKSALVTWGLTFAGTTAAATLGMALYRVQLELRASRHELARKEAELNFALEVQQALFPRQFPVDGGLEFAAVCVPARGISGDY
Ga0137377_107158492	3300012211	Vadose Zone Soil	MRDKIYLSTFLFGAGLLLYVGRDLLEKSAVVTWGLTFGGTTAAAVLGLALYRVQFELRASRHELARKEAELNFALEVQQAFFPRRFPPPDTGLEFAAVCVPARGISG
Ga0137390_114265691	3300012363	Vadose Zone Soil	LRGEVSSFKLGAAVRDKIYLVSFLLLAGLLLYTGRGLLPNSVVVAWGLTFAGTTAAGVLGMVLYRVQLELRASRHELARKEAELSIAREIQGALFP
Ga0153915_126304991	3300012931	Freshwater Wetlands	MRDKVYILSFLFTAGLLLYVGRGLLQESAVVTWGLTFAGTTAAGVLGMALYRVQLELRASRQELAMKQAELNFALEVQRALFPRQ
Ga0126369_133780121	3300012971	Tropical Forest Soil	VLAYVGRDLVQGSALATWGLTFAGATAMAILVASLYRVRLELQASRHQLARKDAELSFALEVQRALFPRQLPDREGLQ
Ga0134110_105167552	3300012975	Grasslands Soil	MVDAEQTMRDRIYLAGFLVGSGLLLYASRSLLTKSALVTWGLTFAGTTAAATLGLALYRVQLELRASRHELARKEAELNFALEVQQALFPRQFP
Ga0134076_104262411	3300012976	Grasslands Soil	MVQAEQTMRDRIYLAGFLLGSGLLLYAGRSLLTKSALVTWGLTFAGTTAAATLGLALYRVQLELRASQHELARKEAELNFALEVQQALFPRQFPVDGGLAFAAVCVPARGISGDY*
Ga0181527_10988092	3300014153	Bog	MRDRLYLLVFLVGAGLLLYVGRGYIAMSTYATFGLTFAGTTAAAVLGLVLYRVQLELRASRHELARKEAELNFALEVQQALFP
Ga0181524_102220962	3300014155	Bog	MRDRLYLLVFLVGAGLLLYVGRGYIAMSAYATFGLTFAGTTAAAVLGMVLYRVQLELRASRHELARKEA
Ga0181517_105118442	3300014160	Bog	MRDRLYLLVFLVGAGVLLYVGRGYIAMSAYATFGLTFAGTTAAAILGMVLYRVQLELRASRHELARKE
Ga0181538_107469861	3300014162	Bog	MRDRLYLLVFLVGAGVLLYVGRGYIAMSAYATFGLTFAGTTAAAILGMVLYRVQLELRASRHELARKEAELTFALEVQQALFPKQFPADGGLEFSAVCVPARGIGG
Ga0187818_104291061	3300017823	Freshwater Sediment	MRDKVYLIGFLVGAGLLLYVGRDLLQRSAALTMVLAFSGVTAAGVLGMGFYRVQLDLRASRRELARREAELNFALEVQQALFPRHFPADGGLEFSAICVPARGISG
Ga0187849_13105281	3300017929	Peatland	MRDRLYLLVFLLGAGVLLYVGRSYIAMSEYATFGLTFAGTTAAAVLGMVLYRVQLELRASRHELARKEAELNFALEVQQALFPKQFP
Ga0187803_101235932	3300017934	Freshwater Sediment	MRDRIYLVVFLVGAGLLLYVGRGFIAMSTYATFGLTFAGTTAAAVLGMALYRVQLELRASRHELARKEAELNFALEVQQALFPKQFPVDRYGVVTSPDYG
Ga0187803_102474471	3300017934	Freshwater Sediment	MRDRVYLAGFLMGAGILLYLGRGLLQQSELVAWGLTFGGTSAVAVLGMTLYRVQHELRASRRELARKEAELSFALQVQRALFPQGFPADTGLEFSAVCVPASGISGDYY
Ga0187854_100244536	3300017938	Peatland	MRDRIYLFVFLVGAGLLLYVGRGRIATSAYATFGLTFAGTTAAAVLGMVLYRVQLELRASRHE
Ga0187854_104240551	3300017938	Peatland	MRDRIYLFVFLVGAGLLLYVGRGFLAMSAYATFGLTFAGTTAAAVLGTVLYRVQLELRASRHE
Ga0187853_100308001	3300017940	Peatland	MRDRIYLFVFLVGAGLLLYVGRGRIATSAYATFGLTFAGTTAAAVLGMVLYRVQLELRASRHELARKEAELNFALEVQQAL
Ga0187879_101642531	3300017946	Peatland	MRDRLYLLVFLVGAGALLYVGRSYIAMSEYATFGLTFAGTTAAAVLGMVLYRVQLELRASRHELARKEAE
Ga0187817_103573872	3300017955	Freshwater Sediment	MRDRIYLLVFLLGAGVLLYVGRGYIAMSTYATFGLTFAGTTAAAVLGMVLYRVQLELRASRHELARKEVELSLALEVQQALFPKQFPADGGLEFSAVCVPARGIGG
Ga0187781_107056281	3300017972	Tropical Peatland	MRDRVYLAGFLLVAGLLLYLGRGLLAESALVTWGLTFAGTSGVAVLGMTLYQVQLQLRASRRELALKEAELSFARQVQQALF
Ga0187781_110820941	3300017972	Tropical Peatland	MRDRLYLLVFLVGAGMLLYVGRGYIAMSTYATFGLTFAGTTAAAVLGMVLYRVQLELRASRHELARKEAELNFALEVQKALFPRQ
Ga0187781_111511882	3300017972	Tropical Peatland	MRDRLYLLVFLVGAGLLLYVGRGYIAMSEYATFGLTFAGTTAAAVLGMVLYRVQLELRASRHE
Ga0187880_12093261	3300018016	Peatland	MRDRLYLLVFLLGAGVLLYVGRSYIAMSEYATFGLTFAGTTAAAVLGMVLYRVQLELRASRHELARKEAELNFALEVQQALFPKQFPADGGLEFSAVCVPARGI
Ga0187874_100252186	3300018019	Peatland	MRDRIYLFVFLVGAGLLLYVGRGRIATSAYATFGLTFAGTTAAAVLGMVLYRVQLELRASRHEL
Ga0187861_101666351	3300018020	Peatland	MRDRIYLFVFLVGAGLLLYVGRGFLAMSAYATFGLTFAGTTAAAVLGTVLYRVQLELRASRHELARKEAELSFALEVQQALFPKQ
Ga0187881_102546952	3300018024	Peatland	MRDRLYLLVFLLGAGVLLYVGRSYIAMSEYATFGLTFAGTTAAAVLGMVLYRVQLELRASRHELARNSSCTR
Ga0187862_104654041	3300018040	Peatland	MRDRLYLLVFLVGAGALLYVGRSYIAMSEYATFGLTFAGTTAAAVLGMVLYRVQLELRASRHELARKEAELSFALQVQQALFP
Ga0187862_109139911	3300018040	Peatland	MRDRLYLLVFLVGAGVLLYVGRGYIAMSTYATFGLTFAGTTAAAVLGLVLYRVQLELRASRHELARQEAELNFALEVQQAL
Ga0187784_103665582	3300018062	Tropical Peatland	MRDRLYLLIFLVGAGVLLYVGRGYIAMSTYATFGLTFAGTTAAAVLGMVLYRVQLELRASRHELARKEA
Ga0187784_105314131	3300018062	Tropical Peatland	MRDRIYLLVFLVGAGVLLYVGRSFIAMSTYATFGLTFAGTTAAAILGMVLYRVQLELRASRHELARKQAELNFALE
Ga0187769_110386922	3300018086	Tropical Peatland	MRDRIYLLLFIAGAGVLLYAGRGYILTSAYATFGLTFVGTTAAAVLGMVLYRVQLELRASRHELARKEAELNFALEVQ
Ga0187769_113027791	3300018086	Tropical Peatland	MRDRLYLLVFLVGAGVLLYVGRSYIAMSEYATFGLTFAGTTAAAVLGMVLYRVQLELRASRHELARKEAELNFALQVQQALFPKQFPADGGLEFS
Ga0187771_101205283	3300018088	Tropical Peatland	MRDRIYLVGFLVGAGILLYLGRGLLQESEVVTWGLTFGGTTAVAVLGVTLYRVQQQLGASRRELARREAELSFALQVQQALFPREFPRDGGLEFSAVCVPA
Ga0187771_106669032	3300018088	Tropical Peatland	MRDKLYLAGFLLAAGLLLYVGRGLLARSALVTGVLVFVGTTAVGVLGLAFYQVQNQLRSSRRELALKEAELNFAREVQVALFPREFPADSGLEFSAVCVPA
Ga0187771_107631142	3300018088	Tropical Peatland	MRDRLYLAGFLIGAGVLLYLGRGLLQRSELVALGLTFSGTSAAAVLGMTLYRLQHELRASRRELARKEAELSFALQVQQALL
Ga0187771_107833391	3300018088	Tropical Peatland	MRDRLYLVGFLVGAGILLYLGRDLLERSDVVTLGLTFGGTTAVGVLAVTLYRVQQELSASRRELARQEAEVSFALQ
Ga0187771_109384841	3300018088	Tropical Peatland	MRDRIYLAGFLLVAGLLLYVGRGLLAKSALVTWGLAFAGTTAVAVLGMALYQVQLQLRASRRELARKEAELQSAREVQQALFPRQFPLDSGLEFSAICVPAA
Ga0187771_111187092	3300018088	Tropical Peatland	MRDRIYLLLFIAGAGALLYAGRGYILTSAYATFGLTFAGTTAAAVLGMVLYRVQLELRASRHELARKEA
Ga0187770_108761252	3300018090	Tropical Peatland	MRDRIYLLIFLVGAGVLLYVGRGYIAMSTYATFGLTFAGTTAAAVLGMVLYRVQLELRASRHELARKEAELNFALEVQQALFPKHFPADGGLEFSAVCVPARG
Ga0187770_118110281	3300018090	Tropical Peatland	MRDRTYLVVFLVVAGLLLYVGRGFIAMSTYATFGLTFAGTTAAAILGMVLYRVQLELRASRHELARKEAELNFALEVQQ
Ga0066669_108129651	3300018482	Grasslands Soil	MRDKVYLFSFLLLAGLLLYAGRGLFQSSQLATWGLTFGGTTAAGILGMTLYRVQSELRASRRELARKDAEITFAREVQEALFPRQLPKDSGLTFSCVCVPARGIS
Ga0187846_100374241	3300021476	Biofilm	MKDRIYLAVFLLGAGALLYAGRGLIAKSVIVTTGLTFAVTTAAGAFGLALYRVQIELRASRMELARKQAELNFAHEVQSALFPRQFPSDSGLEFAAICVPA
Ga0187846_101987432	3300021476	Biofilm	MKDRIYLAVFLLGAGALIYTGRGLIAKSVIVTAGLTFAGTTAAGVFGLALYRVQIELRASRMELARKQAELNFAHEVQRALFPRQFPADRGLEFSAI
Ga0126371_133089901	3300021560	Tropical Forest Soil	MRDKIYLAGFLLLAGLLLYLGRGLLAQSAWVTWGLTFAGTSGAAVLGMTLYQVQHQLRASRRELALREAELNFARQVQQALFPQRFPVDSGLEFSAVCVP
Ga0209172_100664004	3300025310	Hot Spring Sediment	MRDKLYILAIFLGAGLLLFLGRGLLRESALFAFGLIFAGTMAAGILGIALYRVQLELRASRQELAMKQAELNFALEVQRALFPRQFPVDSGLEFSGICLPARGISGD
Ga0208321_10549381	3300025409	Peatland	MRDKAYLIGFLLGAALLLYVGRGLIQSSAVVALALTFAGTTAAGVLGMVLYRVQAELRASQRELARKEAELSFALEVQQSLFPRHFPADGGLEFSAI
Ga0208036_10104901	3300025419	Peatland	MRDRIYLLVFLVGAGLLLYVGRGFLAMSAYATFGLTFAGTTAAAVLGTVLYRVQLELRASRHELARKEAELNFALEVQQALFPR
Ga0208034_10074131	3300025442	Peatland	MRDRIYLFVFLVGAGLLLYVGRGRIATSAYATFGLTFAGTTAAAVLGMVLYRVQLELRASRHELARKEAELNFALEVQQALFPKQFPADQSLEFS
Ga0208455_10379011	3300025453	Peatland	MRDRLYLLVFLVGAGALLYVGRSYIAMSEYATFGLTFAGTTAAAVLGMVLYRVQLELRASRHELARKEAELSFA
Ga0208689_10512252	3300025459	Peatland	MRHITSGHVERLLNSQTSVRLSRTMRDRIYLFVFLVGAGLLLYVGRGLIATSAYATFGLTFAGTTAAAVLGMVLYRVQLELRASRHELARKEAELNFALEVQQALFPKQFPADQSLEFSAVCVPARGIGG
Ga0208562_10558682	3300025460	Peatland	MRDRIYLFVFLVGAGLLLYVGRGLIATSAYATFGLTFAGTTAAAVLGMVLYRVQLELRASRHELARKEAELNFALEVQQALFPK
Ga0208692_10855912	3300025472	Peatland	MRDRIYLFVFLVGAGLLLYVGRGRIATSAYATFGLTFAGTTAAAVLGMVLYRVQLELRASRHELA
Ga0208188_10860262	3300025507	Peatland	MRDRLYLLVFLVGAGVLLYVGRGYIAMSTYATFGLTFAGTTAAAVLGLVLYRVQLELRASRHELARQEAELNFALE
Ga0209155_12681931	3300026316	Soil	MVQAEQTMRDRIYLAGFLLGSGLLLYAGRSLLTKSALVTWGLTFAGTTAAATLGLALYRVQLELRASQHELARKEAELNFALEVQQALFPRQFPVDGGLEFAAVCVPARGISG
Ga0209470_11580101	3300026324	Soil	MRDRIYLAGFLLGSGLLLYASRSLLTKSALVTWGLTFAGTTAAATLGLALYRVQLELRASQHELARKEAELN
Ga0209057_10757312	3300026342	Soil	MRDRIYLAGFLLGSGLLLYASRSLLTKSALVTWGLTFAGTTAAATLGLALYRVQLELRASQHELARKEAELNFALEVQQALFPRQF
Ga0209517_106935531	3300027854	Peatlands Soil	MRDRLYLLVFLVGAGVLLYVGRGYIAMSTYATFGLTFAGTTAAAVLGLVLYRVQLELRASRHELARKEAELNFALEVQQALFPK
Ga0318542_101649482	3300031668	Soil	MKDRIYLAIFLLGAGVLLYAGRGLIARSVIVTAGLTFAGTTAAGVFGLALYRVQIELRASRMELARKQAELNFAHEVQRALFPRQFPSDSDLEFS
Ga0318574_105202681	3300031680	Soil	MKDRIYLAIFLLGAGVLLYAGRGLIARSVIVTAGLTFAGTTAAGVFGLALYRVQIELRASRMELARKQAELNFAHEVQRALFPRQFPSDSGLEFSAICVPASGISGD
Ga0318502_103165861	3300031747	Soil	MKDRIYLAIFLLGAGVLLYAGRGLIARSVIVTAGLTFAGTTAAGVFGLALYRVQIELRASRMELARKQAELNFAHEVQRALFPRQFPSDSDLE
Ga0318543_101142552	3300031777	Soil	MKDRIYLAIFLLGAGVLLYAGRGLIARSVIVTAGLTFAGTTAAGVFGLALYRVQIELRASRMELARKQAELNFAHEVQRALFPRQFPSDSGLEFSAICVPASGI
Ga0318547_100777183	3300031781	Soil	MKDRIYLAIFLLGAGVLLYAGRGLIARSVIVTAGLTFAGTTAAGVFGLALYRVQIELRASRMELA
Ga0310916_101296081	3300031942	Soil	MKDRIYLAIFLLGAGVLLYAGRGLIARSVIVTAGLTFAGTTAAGVFGLALYRVQIELRASRMELARKQAELNFAHEVQRALFPRQF
Ga0310913_101529392	3300031945	Soil	MKDRIYLAIFLLGAGVLLYAGRGLIARSVIVTAGLTFAGTTAAGVFGLALYRVQIELRASRMELARKQAELNFAHEVQRALFPRQFPSDSGLEFSAICVPAR
Ga0311301_119888523	3300032160	Peatlands Soil	MRDKLYLAGFLLAAGLLLYVGRGLLERSALVTGVLVFAGTTAVGVLGLTLYQVQNQLRASRRELARKEAEINFAREVQVALFPRQ
Ga0315283_117581242	3300032164	Sediment	MRDKIYTIVLLATAGLLLILGRGLLRESTVFNFGLTFAGTMAAGILGIALYRVQLELRASRQELAMKQAELNFALEVQLSLFPREFPPESGMEFSGICIPARGVSG
Ga0315286_106889732	3300032342	Sediment	MRDKIYTIVLLATAGLLLILGRGLLRESTVFNFGLTFAGTMAAGILGIALYRVQLELRASRQELAMKQAELNFALEVQLSLFPREFPPESGMEFSGICIPARG
Ga0335078_100820765	3300032805	Soil	MRDKLYLTGFLLAAGLLLYVGRGLLERSALVAGALVFAGTTAVGVLGLTLYQVQNQLRVSRRELARQEAEINFAREVQVALFPRQFPTGS
Ga0335078_106354463	3300032805	Soil	MRDKLYLAGFLLAAGLLLYLGRGLLERSALVAGTLVFAGTTAVGVLGLTLYQVQNQLRVSRRELARQEAEINFAREVQVALFPRQFPTGSSSRPCACRRQGSVAITTTSCN
Ga0335078_123948882	3300032805	Soil	MRDKIYLASFLLGAGALLYLGRGLLAQYALFTWGLTFAGTTAVGVLGMALYQVQDQLRASRRELARKEAELNFAREVQRALFPRQFPVDSG
Ga0335081_122669092	3300032892	Soil	MRDRVYLLIFLVGAGVLLYVGRGYIAMSTYATFGLTFAGTTAAAVLGMVLYRVQLELRASRHE
Ga0335081_126132931	3300032892	Soil	MRDRLYLLVFLLGAGLLLYVGRGYIAMSTYATFGLTFAGTTAAAILGMVLYRVQLELRASRHELARKEAELTFALEVQQ
Ga0335074_114683441	3300032895	Soil	MRDKVYLAGFLLVAGLLLFLSRGLLTHSALLAWGVTFAGTTAVAVLGMALYQVQLKLGASRRELARKEAELNFAREVQQALFPRRFPRDSGLEF
Ga0335077_113038491	3300033158	Soil	MRDRIYLLVFLVGAGVLLYVGRGYLAMSAYAAFGLTFAGTTAAAVLGMVLYRVQLELRASRHELARKEAELNFALEVQQALFPRRFPVDGDLEFSAVCVPARGI
Ga0335077_121639081	3300033158	Soil	MRDRLYLLVFLVGAGVLLYVGRGYIAMSTYATFGLTFAGTTAAAVLGMVLYRVQLELRASRHELARKEAELNFALEVQQALFPK
Ga0326727_111510621	3300033405	Peat Soil	MRDRIYLFVFLVGAGLLLYAGRGRIAMSSYATFGLTFAGTTAAAVLGMVLYRVQLELRASRHELARKE
Ga0299912_110097021	3300033489	Soil	VNEYTYLPTRPFSFKLSASMRDKIYTIVILAFAGLLLILGRGLLRESALLNFGLTFAGTTAAGILGIALYRVQLELRASRQELAMKQAELNFALEVQLSLFPREFPPDSGMEFSGVCIPARG
Ga0314861_0146726_3_305	3300033977	Peatland	MRDRIYLLLFVAGAGVLLYVGRGYILTSAYATFGLTFAGTTAAAVLGMVLYRVQLELRASRHELARKEAELNFALEVQQALFPRQFPTDEGLEFSAVCVPA
Ga0326724_0436670_455_685	3300034091	Peat Soil	MRDRIYLFVFLAGAGLLLYAGRGLIATSAYATFGLTFAGTTAAAVLGMVLYRVQLELRVSRHELARQEAELNFALEV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F093424

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences