Metagenome Family F093423

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F093423
Family Type	Metagenome
Number of Sequences	106
Average Sequence Length	71 residues
Representative Sequence	MASPQTTQADRVARSLKRLGFRLTRIGRSFTIIDNTGGPATGSKTGMSLAEVERWISEHIKPRRNVN
Number of Associated Samples	56
Number of Associated Scaffolds	106

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	71.43 %
% of genes near scaffold ends (potentially truncated)	32.08 %
% of genes from short scaffolds (< 2000 bps)	88.68 %
Associated GOLD sequencing projects	48
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.62

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (78.302 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (38.679 % of family members)
Environment Ontology (ENVO)	Unclassified (58.491 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (77.358 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 24.21% β-sheet: 12.63% Coil/Unstructured: 63.16%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.62
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.62
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF04355	SmpA_OmlA	5.66
PF01402	RHH_1	2.83
PF03692	CxxCxxCC	2.83
PF04116	FA_hydroxylase	1.89
PF00072	Response_reg	0.94
PF04392	ABC_sub_bind	0.94
PF11399	DUF3192	0.94
PF02037	SAP	0.94
PF12770	CHAT	0.94
PF07927	HicA_toxin	0.94
PF13560	HTH_31	0.94
PF10686	YAcAr	0.94
PF13248	zf-ribbon_3	0.94
PF00216	Bac_DNA_binding	0.94
PF15919	HicB_lk_antitox	0.94

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG2913	Outer membrane protein assembly factor BamE, lipoprotein component of the BamABCDE complex	Cell wall/membrane/envelope biogenesis [M]	5.66
COG3000	Sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily	Lipid transport and metabolism [I]	1.89
COG0776	Bacterial nucleoid DNA-binding protein IHF-alpha	Replication, recombination and repair [L]	0.94
COG1724	Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase family	General function prediction only [R]	0.94
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.94

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.30 %
All Organisms	root	All Organisms	21.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.30 %
cellular organisms	root	All Organisms → cellular organisms	21.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.30 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	21.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.30 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	16.04 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.30 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	12.26 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.30 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7.55 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	4.72 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.30 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.72 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	2.83 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.89 %
Desulfovibrionales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales	0.94 %
Chelatococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Chelatococcaceae	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.30 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.72 %
Hyphomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	2.83 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.89 %
Chelatococcus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Chelatococcaceae → Chelatococcus	0.94 %
Desulfovibrionaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.30 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.72 %
unclassified Hyphomicrobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → unclassified Hyphomicrobium	1.89 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.89 %
Chelatococcus asaccharovorans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Chelatococcaceae → Chelatococcus → Chelatococcus asaccharovorans	0.94 %
Desulfovibrio	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Desulfovibrio	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.30 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.72 %
Hyphomicrobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → unclassified Hyphomicrobium → Hyphomicrobium sp.	1.89 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.89 %
unclassified Desulfovibrio	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Desulfovibrio → unclassified Desulfovibrio	0.94 %
Chelatococcus asaccharovorans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Chelatococcaceae → Chelatococcus → Chelatococcus asaccharovorans	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.30 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.72 %
Hyphomicrobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → unclassified Hyphomicrobium → Hyphomicrobium sp.	1.89 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.89 %
Desulfovibrio sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Desulfovibrio → unclassified Desulfovibrio → Desulfovibrio sp.	0.94 %
Chelatococcus asaccharovorans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Chelatococcaceae → Chelatococcus → Chelatococcus asaccharovorans	0.94 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005332\|Ga0066388_100073168	All Organisms → cellular organisms → Bacteria	3747	Open in IMG/M
3300005332\|Ga0066388_100082698	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3593	Open in IMG/M
3300005332\|Ga0066388_100473493	Not Available	1892	Open in IMG/M
3300005332\|Ga0066388_100526273	Not Available	1815	Open in IMG/M
3300005332\|Ga0066388_101544742	Not Available	1164	Open in IMG/M
3300005332\|Ga0066388_102414717	Not Available	954	Open in IMG/M
3300005332\|Ga0066388_107091339	Not Available	564	Open in IMG/M
3300005713\|Ga0066905_100061323	All Organisms → cellular organisms → Bacteria → Proteobacteria	2366	Open in IMG/M
3300005764\|Ga0066903_100203637	Not Available	2966	Open in IMG/M
3300005764\|Ga0066903_101529586	Not Available	1261	Open in IMG/M
3300005764\|Ga0066903_102191997	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1065	Open in IMG/M
3300005764\|Ga0066903_102239016	Not Available	1055	Open in IMG/M
3300005764\|Ga0066903_103915947	Not Available	799	Open in IMG/M
3300005764\|Ga0066903_105302819	Not Available	681	Open in IMG/M
3300005764\|Ga0066903_107934421	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300005764\|Ga0066903_108433515	Not Available	526	Open in IMG/M
3300006854\|Ga0075425_100013033	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	8935	Open in IMG/M
3300007076\|Ga0075435_101947159	Not Available	516	Open in IMG/M
3300009162\|Ga0075423_11906723	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	642	Open in IMG/M
3300009792\|Ga0126374_11148683	Not Available	619	Open in IMG/M
3300010043\|Ga0126380_10376963	Not Available	1044	Open in IMG/M
3300010046\|Ga0126384_10446399	Not Available	1103	Open in IMG/M
3300010046\|Ga0126384_12382133	Not Available	512	Open in IMG/M
3300010047\|Ga0126382_12023693	Not Available	549	Open in IMG/M
3300010358\|Ga0126370_11024131	Not Available	755	Open in IMG/M
3300010358\|Ga0126370_12084092	Not Available	556	Open in IMG/M
3300010359\|Ga0126376_10780722	All Organisms → cellular organisms → Bacteria	930	Open in IMG/M
3300010360\|Ga0126372_10513878	Not Available	1128	Open in IMG/M
3300010360\|Ga0126372_10872121	Not Available	900	Open in IMG/M
3300010360\|Ga0126372_11032132	Not Available	836	Open in IMG/M
3300010360\|Ga0126372_11715214	Not Available	670	Open in IMG/M
3300010360\|Ga0126372_13308623	Not Available	501	Open in IMG/M
3300010361\|Ga0126378_10248434	All Organisms → cellular organisms → Bacteria	1872	Open in IMG/M
3300010362\|Ga0126377_11758898	Not Available	695	Open in IMG/M
3300010366\|Ga0126379_11780705	Not Available	720	Open in IMG/M
3300010376\|Ga0126381_101682410	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	917	Open in IMG/M
3300010398\|Ga0126383_10350438	Not Available	1497	Open in IMG/M
3300010398\|Ga0126383_11326143	Not Available	810	Open in IMG/M
3300010398\|Ga0126383_12657689	Not Available	584	Open in IMG/M
3300010398\|Ga0126383_12881707	Not Available	562	Open in IMG/M
3300012948\|Ga0126375_11680614	Not Available	550	Open in IMG/M
3300012948\|Ga0126375_11860463	Not Available	527	Open in IMG/M
3300012971\|Ga0126369_12909154	Not Available	561	Open in IMG/M
3300016270\|Ga0182036_10109838	Not Available	1892	Open in IMG/M
3300016294\|Ga0182041_10161055	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → unclassified Hyphomicrobium → Hyphomicrobium sp.	1744	Open in IMG/M
3300016294\|Ga0182041_10603765	Not Available	964	Open in IMG/M
3300016294\|Ga0182041_11044876	Not Available	740	Open in IMG/M
3300016341\|Ga0182035_10142444	Not Available	1828	Open in IMG/M
3300016357\|Ga0182032_10278348	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → unclassified Hyphomicrobium → Hyphomicrobium sp.	1312	Open in IMG/M
3300016371\|Ga0182034_11779045	Not Available	543	Open in IMG/M
3300016387\|Ga0182040_10072372	Not Available	2239	Open in IMG/M
3300016387\|Ga0182040_10847957	Not Available	755	Open in IMG/M
3300016387\|Ga0182040_11059146	Not Available	678	Open in IMG/M
3300016404\|Ga0182037_11074791	Not Available	703	Open in IMG/M
3300016422\|Ga0182039_10155604	Not Available	1777	Open in IMG/M
3300016422\|Ga0182039_11930373	Not Available	542	Open in IMG/M
3300016445\|Ga0182038_11902844	Not Available	538	Open in IMG/M
3300016445\|Ga0182038_12168098	Not Available	504	Open in IMG/M
3300018060\|Ga0187765_10751537	Not Available	645	Open in IMG/M
3300031545\|Ga0318541_10138235	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	1331	Open in IMG/M
3300031561\|Ga0318528_10774772	Not Available	513	Open in IMG/M
3300031573\|Ga0310915_10194766	All Organisms → cellular organisms → Bacteria	1416	Open in IMG/M
3300031680\|Ga0318574_10879371	Not Available	525	Open in IMG/M
3300031719\|Ga0306917_10547886	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	909	Open in IMG/M
3300031719\|Ga0306917_10932786	Not Available	679	Open in IMG/M
3300031719\|Ga0306917_11077476	Not Available	626	Open in IMG/M
3300031744\|Ga0306918_10332064	Not Available	1177	Open in IMG/M
3300031747\|Ga0318502_10984022	Not Available	514	Open in IMG/M
3300031748\|Ga0318492_10533745	Not Available	624	Open in IMG/M
3300031796\|Ga0318576_10438953	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	617	Open in IMG/M
3300031797\|Ga0318550_10437039	Not Available	633	Open in IMG/M
3300031833\|Ga0310917_10310248	Not Available	1068	Open in IMG/M
3300031833\|Ga0310917_10631640	Not Available	727	Open in IMG/M
3300031833\|Ga0310917_11024892	Not Available	553	Open in IMG/M
3300031845\|Ga0318511_10447623	Not Available	595	Open in IMG/M
3300031879\|Ga0306919_10362898	Not Available	1108	Open in IMG/M
3300031879\|Ga0306919_10512484	Not Available	925	Open in IMG/M
3300031879\|Ga0306919_11036604	Not Available	627	Open in IMG/M
3300031879\|Ga0306919_11503801	Not Available	507	Open in IMG/M
3300031890\|Ga0306925_11851379	Not Available	576	Open in IMG/M
3300031910\|Ga0306923_10553522	Not Available	1296	Open in IMG/M
3300031910\|Ga0306923_11561838	Not Available	688	Open in IMG/M
3300031912\|Ga0306921_10303606	Not Available	1869	Open in IMG/M
3300031912\|Ga0306921_11396441	Not Available	770	Open in IMG/M
3300031912\|Ga0306921_11400726	Not Available	769	Open in IMG/M
3300031912\|Ga0306921_11909985	All Organisms → cellular organisms → Bacteria → Proteobacteria	635	Open in IMG/M
3300031942\|Ga0310916_11537125	Not Available	542	Open in IMG/M
3300031945\|Ga0310913_10390430	Not Available	987	Open in IMG/M
3300031947\|Ga0310909_10591584	Not Available	927	Open in IMG/M
3300031947\|Ga0310909_11493410	Not Available	538	Open in IMG/M
3300031954\|Ga0306926_10486878	Not Available	1517	Open in IMG/M
3300031954\|Ga0306926_11680416	Not Available	725	Open in IMG/M
3300032001\|Ga0306922_10653426	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1110	Open in IMG/M
3300032025\|Ga0318507_10545097	Not Available	505	Open in IMG/M
3300032064\|Ga0318510_10122744	Not Available	1007	Open in IMG/M
3300032094\|Ga0318540_10290044	Not Available	790	Open in IMG/M
3300032094\|Ga0318540_10646911	Not Available	509	Open in IMG/M
3300032261\|Ga0306920_100263736	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Chelatococcaceae → Chelatococcus → Chelatococcus asaccharovorans	2569	Open in IMG/M
3300032261\|Ga0306920_100304371	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Desulfovibrio → unclassified Desulfovibrio → Desulfovibrio sp.	2374	Open in IMG/M
3300032261\|Ga0306920_100314466	All Organisms → cellular organisms → Bacteria → Proteobacteria	2332	Open in IMG/M
3300032261\|Ga0306920_100359275	All Organisms → cellular organisms → Bacteria	2167	Open in IMG/M
3300032261\|Ga0306920_100388648	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2075	Open in IMG/M
3300032261\|Ga0306920_100699207	Not Available	1494	Open in IMG/M
3300032261\|Ga0306920_102066738	Not Available	796	Open in IMG/M
3300032261\|Ga0306920_104450922	Not Available	501	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.17%
Host-Associated	Host-Associated	2.83%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	97.17%
Plants	Host-Associated → Plants	2.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	97.17%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	81.13%
Loam	Environmental → Terrestrial → Soil → Loam	15.09%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.83%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.94%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	58.49%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.64%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	15.09%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.83%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	38.68%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	22.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	19.81%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	15.09%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.83%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.94%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066388_1000731681	3300005332	Tropical Forest Soil	MPSRQATQADRVARSLKRLGFRMTRIGRSFTIIENAGEPAAGGKSGMTLTEIERWIGEHITPKRRR*
Ga0066388_1000826985	3300005332	Tropical Forest Soil	MAGQPTTQADRVARSLKRLGFRLTRIGRSFTIIDSTGRPATGSKTGMSLGEVERWIGKHVKSRLNVNDAERPPWED*
Ga0066388_1004734932	3300005332	Tropical Forest Soil	MARPTTQADRVARSLKRLGYRLTRIGRSFTIIDSAGRPAAGSKTGMSLAEVEHWIAGHVKPRLNVNDNERPPWEE*
Ga0066388_1005262732	3300005332	Tropical Forest Soil	MATTPTTQADRVSRSLKRLGFRLTRIGRTFTIVDNVGDPATGTKTGMTLAEIERWIGEYIRRRKNVVGR*
Ga0066388_1015447421	3300005332	Tropical Forest Soil	MATTPTTQADRVARSLKRLGFRLTRVGRSFSIIDSTGELAAGSETKMSLFEIERWIGEHVKPKRPGKSAEPPPWE*
Ga0066388_1024147172	3300005332	Tropical Forest Soil	MARQQTTQADRVARSLKRLGFRMTRVGRSFTIIDSTGEPAAGSKTGMSLAEIELWIGEHIRPK*
Ga0066388_1070913392	3300005332	Tropical Forest Soil	MPSRQTAQADRVARSLKRLGFRMTRIGRSFTIFDNAGEPAAGSKTGMTLAEIERWIGEHIRPKRRR*
Ga0066905_1000613236	3300005713	Tropical Forest Soil	MASSQTTQADRVARSLKRLGFRLTRIGRTFTIVDNAGEPATGTKTGMTLAEIERWISEHIKPKGRR*
Ga0066903_1002036371	3300005764	Tropical Forest Soil	MASPQTTQADRVARSLKRLGFRLTRISRSFTIIDSAGGPAAGSKTRMTLAEIERWIGEHIKPKRRGNVNDGTRDEGLYRGRDG
Ga0066903_1015295862	3300005764	Tropical Forest Soil	MASPQTTHADRIARSLKRLGFRMTRIGRSFTIVDNAGVPAIDGKTGMTLEEVERWIANHIKPKKTALREKRR*
Ga0066903_1021919972	3300005764	Tropical Forest Soil	MASSQTTQADRVARSLKRLGFRLTPIGRTFTIVDNAGEPATGTKTGMTLAEIERWISEHIKPKGRR*
Ga0066903_1022390162	3300005764	Tropical Forest Soil	MASQQQTQADRIARSLKRLGFRMTRIRRSLTIVDDSTGEIAINSRTGMTLAEIELWIGEHIKPRKNSE*
Ga0066903_1039159471	3300005764	Tropical Forest Soil	RVARSLKRLGFRLDRYGRSFSIIDSAGGRVAANMSIAEIERWIGDYIRPKPKAKG*
Ga0066903_1053028192	3300005764	Tropical Forest Soil	MASPQTTQADRVARSLKRLGFRLTRIGRTFTIVDNAGGAGHRHQTGMTLAQIERWIREHIRPRQNGGR*
Ga0066903_1079344211	3300005764	Tropical Forest Soil	MMASAPTTHADRIARSLKRLGFRMTRVGRSFTVIDSAGELAPGSATGMSLTEIEKWIGEFIRPGRPA*
Ga0066903_1084335151	3300005764	Tropical Forest Soil	QADRVSRSLKRLGFRMTRHGRSFTIIDSAGRPAPASKPGMSLTEVDQWIGERIKLRRNVLGR*
Ga0075425_10001303316	3300006854	Populus Rhizosphere	MASQETTQADRVARSLKRLGFRMTRIGRSFTIIDSAGEPAASSKTGMTLAEIERWIGEFIRPGGKRR*
Ga0075435_1019471591	3300007076	Populus Rhizosphere	ASQETIQADRVARSLKRLGFRMTRIGRSFTIIDSAGEPAASSKTGMTLAEIERWIGEFIRPGGKRR*
Ga0075423_119067233	3300009162	Populus Rhizosphere	MASQETTQADRVARSLKRLGFRMTRIGRSFTIIDSAGEPAASSKTGMTLAEIERWIG
Ga0126374_111486832	3300009792	Tropical Forest Soil	PAGRAGTGGAEGEGETLMATTPTTQADRVSRSLKRLGFRLTRIGRTFTIVDNVGDPATGTKTGMTLAEIERWIGEYIRRRKNVVGR*
Ga0126380_103769631	3300010043	Tropical Forest Soil	RSALPGSTEMASQQTTQADRVARSLKRLGFRLTHIGRSFTIIDNTGGPATGSKTGMSLAEVERWISEHIKPRRNVNDEERPPWED*
Ga0126384_104463993	3300010046	Tropical Forest Soil	MASPQTTQADRVARSLKRLGFRLTHIGRSFTIIDNTGGPATGSKTGMSLAEVERWISEHIKPRRNVNDEERPPWED*
Ga0126384_123821331	3300010046	Tropical Forest Soil	PQATQADRVARSLKRLGFRMTRVGRSFTIIDSAGGLATGRKTGMSLAEIERWIGEHIKRPQGRG*
Ga0126382_120236932	3300010047	Tropical Forest Soil	MASPQTTQADRVARSLKRLGFRLTHIGRSFTIIDNTGGPATGSKTGMSLAEVERWISEHIKPRRNVRRAGDIARPRR*
Ga0126370_110241312	3300010358	Tropical Forest Soil	MAGQPTTQADRVARSLKRLGFRLTRIGRTFTIVDNVGDPATGTKTGMTLAEIERWIGEYIRRRQNVVGR*
Ga0126370_120840921	3300010358	Tropical Forest Soil	MASRETTQADRVARSLKRLGFRLTRIGRTFTIIDNAGELATGTKTGMTLAEIERWIGEHIRPKRRR*
Ga0126376_107807223	3300010359	Tropical Forest Soil	MASPQTTQADRVARSLKRLGFRLTRISGSFTIIDSAGGPAAGSKTRMTLAEIERWIGEHIKPKRRGNVNDEERPPWED*
Ga0126372_105138782	3300010360	Tropical Forest Soil	MATTPTTQADRVSRSLKRQGFRLTRIGRTFTIVDNVGDPATGTKTGMTLAEIERWIGEYIRRRKNVVGR*
Ga0126372_108721212	3300010360	Tropical Forest Soil	MATTPTTQADRVARSLKRLGFRLTRVGRSFSIIDSTGELAAGSETKMSLFEIERWIGEHVKPKRPGKSAEPPPLGMKQASSRRRKE*
Ga0126372_110321323	3300010360	Tropical Forest Soil	MASPQTTQADRVARSLKRLGFRLTRIGRSFTIVDNTGGPATGSKTGMSLAEVERWMSEHIKPRRN*
Ga0126372_117152142	3300010360	Tropical Forest Soil	MARVARSLKRLGYRLTRIGRSFTIIDSAGRPAAGSKTGMSLAEVEHWIAGHVKPRLNVNDNERPPWEE*
Ga0126372_133086232	3300010360	Tropical Forest Soil	MATTPTTQADRVARSLKRLGFRLTPIGRTFTIVDNAGEPATGTKTGMTLAEIERWISEHIKPKGRR*
Ga0126378_102484345	3300010361	Tropical Forest Soil	MSRPTTQADRVARSLKRLGYRPTRIGRSFTIIDSAGRPAAGSKTGMSLAEVEHWIAGHVKPRLNVNDNERPPWEE*
Ga0126377_117588981	3300010362	Tropical Forest Soil	MAGQPTTQADRVARSLKRLGFRMTRVGRFFTIVDNAGAPAAGSKTGMSLADIERWIGEHIKPQRRGRR*
Ga0126379_117807052	3300010366	Tropical Forest Soil	MATTPTTQADRVARSLKRLGFRLTRIGRTFTIVDNVGDPATGTKTGMTLAEIERWIGEHIRPK*
Ga0126381_1016824101	3300010376	Tropical Forest Soil	MATTPTTQADRVSRSLKRLGFRLTRIGRTFTIVDNVGDPATGTKTGMTLAEIERWISEHIKPKGRR*
Ga0126383_103504383	3300010398	Tropical Forest Soil	MASPQTTQADRVARSLKRLGFRLTRIGRSFTIIDNTGGPATGSKTGMSLAEVERWISEHIKPRRNVNDEERPT*
Ga0126383_113261432	3300010398	Tropical Forest Soil	MATTPTTQADRVARSLKRLGFRLTRIGRSFTIIDNAGEPAAGSKTGMSLAEIELWIGEHIRSRQNVVGR*
Ga0126383_126576891	3300010398	Tropical Forest Soil	QADRIARSLKRLGFRLTRIGRSFTIIDAAGERVAARMSVAQVEDWIREHIKPRRNGAR*
Ga0126383_128817072	3300010398	Tropical Forest Soil	MPSRQTTQADRVARSLKRLGFRMTRIGRSFTIFDNAGEPAAGSKTGMTLAEIERWIGEHIRPKRRRCLARPPLLGHR*
Ga0126375_116806142	3300012948	Tropical Forest Soil	MAAPIQTQADRVARSLKRLGFRMTRVGRTFTIVDSAGELAPGSKARMSLAEIERWIGEYIKRGGA*
Ga0126375_118604631	3300012948	Tropical Forest Soil	RVARSLKRLGYRLTRIGRSFTIIDSAGRPAAGSKTGMSLAEVEHWIAGHVKPRLNVNDNERPPWEE*
Ga0126369_129091541	3300012971	Tropical Forest Soil	MATTPTTQADRVSRSLKRLGFRLARIGRSFSIIDSAGERVAAGMSIAEIESWIGDYIRPKPKAKG*
Ga0182036_101098383	3300016270	Soil	MATTPTTQADRVSRSLKRLGFRLTRIGRTFTIVDNVRDPATGTKTGMTLAEIERWIGEYIRRRKNVVGR
Ga0182041_101610551	3300016294	Soil	MVTTPTTQADRVSRSLKRLGFRLTRIGRTFTIVDNVGDPATGTKTGMTLAEIERWIGEYIRRRKNVVGR
Ga0182041_106037652	3300016294	Soil	MSSSPTTQADRVARSLKRLGFRLTRIGRSFTIIDNTGGPATGSKTGMSLAEVERWISEHIKPRRNVNDEERPTCED
Ga0182041_110448761	3300016294	Soil	GGAEALMASPQTTQADRVARSLKRLGFRLTRIGRSFTIIDSTGRPATGSKTGMSLDEVERWIGEHVKSRLNVNDAERPPWDD
Ga0182035_101424442	3300016341	Soil	MSSSPTTQADRVARSLKRLGFRLTRIGRSFTIIDAAGERVAARMSVAQVENWIREHIKPRRNGAR
Ga0182032_102783482	3300016357	Soil	RAGIGGEEGEGETLMVTTPTTQADRVSRALKRLGFRLTRIGRTFTIVDNVGDPATGTKTGMTLAEIERWIGEYIRRRKNVVGR
Ga0182034_117790451	3300016371	Soil	RSLKRLGFRLTRIGRSFTIIDAAGERVAARMSVAQVENWIREHIKPRRNGAR
Ga0182040_100723723	3300016387	Soil	MATTPTTQADRVSRSLKRLGFRLTRLGRTFTIVDNVGDPATGTKTGMTLAEIERWIGEYIRRRKNVVGR
Ga0182040_108479571	3300016387	Soil	MAGPPTTQADRVARSLKRLGFRLTRIGRSFTIIDNTGGPATGSKTGMSLAEVERWISEHIKPRRNVNDEERRPWED
Ga0182040_110591461	3300016387	Soil	MATQPTTQADRAARSLKRLGFRMTRVGRSFTIIDSTGGPATGSKTGMSLSEIEGWIDEHVKLRALWGLKRWPKQ
Ga0182037_110747911	3300016404	Soil	MATTATTQADRVARSLKRLGFRLTRIGRTFTIVDNAGDLVTGTKTGMTLAEIERWIGEHIRRRQNVVGRSGRSGYFSHK
Ga0182039_101556042	3300016422	Soil	MVTTPTTQADRVSRSLKRLGFRLTRIGRTFTIVDNVGDHTGTKTGMTLAEIERWIGEYIRRRKNVVGR
Ga0182039_119303733	3300016422	Soil	EGGEEALMAGPPTTQADRVARSLKRLGFRLTRIGRSFTIIDTTGGPATGSKTGMSLGEIERWIGKHVKSRLNVNDAERPPWED
Ga0182038_119028442	3300016445	Soil	MARPQTTQADRVARSLKRLGFRLTRIGRTFTIIDNTGRPATGSKTRMSLGEVERWIGEHVKSRLNVNDAERGADRPRP
Ga0182038_121680981	3300016445	Soil	ALMATTPTTQADRVARSRKRRGFRLTRVGRTFTIVDNAGDLVTGTKTGMTLAEIERWIGDHIRRRQNVVGR
Ga0187765_107515371	3300018060	Tropical Peatland	MASQETTQADRVERSLKRLGFRLTRIGRTFTIIGSAGAPAADSKAGMSLAEIERWIGEHVKPRRSGRR
Ga0318541_101382354	3300031545	Soil	MATTPTTQADRVARSLKRLGFRLTRIGRTFTIVDNAGDLVTGTKTGMTLAEIERWIGEHIRRRQNVVGR
Ga0318528_107747723	3300031561	Soil	VARSLKRLGFRLTRIGRSFTIIDSTGRPATGSKTGMSLGEVERWIGEHVKSRRNVNDAERPPWED
Ga0310915_101947664	3300031573	Soil	MASPQTTQADRVARSLKRLGFRLTRIGRSFTIIDNTGGPATGSKTGMSLAEVERWISEHIKPRRNVNDEERPTCED
Ga0318574_108793712	3300031680	Soil	MASPQTTQADRVARSLKRLGFRLTRIGRSFTIIDNTGGPATGSKTGMSLAEVERWISEHIKPRRNVN
Ga0306917_105478861	3300031719	Soil	MASPQTTQADRVARSLKRLGFRLTRIGRSFTIIDTTGGPATGSKTGMSLGEIERWIGKHVKSRLNVNDAERPPW
Ga0306917_109327862	3300031719	Soil	MATTPTTQADRVSRSLKRLGFRLTRIGRTFTIVDNVGDHTGTKTGMTLAEIERWIGE
Ga0306917_110774761	3300031719	Soil	MATTPTTQADRVARSLKRLGFRLTRIGRTFTIVDNAGDLVTGTKTGMTLAEIERWIGEHIRRRQNVVGRSGRSGYFSHK
Ga0306918_103320641	3300031744	Soil	MATTPTTQADRVSRSLKRLGFRLTRIGRTFTIVDNVGDHTGTKTGMTLAEIERWIGEYIRRRKNVVGR
Ga0318502_109840222	3300031747	Soil	MASPQTTQADRVARSLKRLGFRLTRIGRSFTIIDNTGGPATGSKTGMSLAEVERWISEHIKPRR
Ga0318492_105337452	3300031748	Soil	MASPLTTHADRVARSLKRLGFRLTRIGRSFTIIDNTGGPATGSKTGMSLAEVERWISEHIKPRRNVNDEERPTCED
Ga0318509_105597572	3300031768	Soil	ADRVSRSLKRLGFRLTRIGRTFTIVDNVGDHTGTKTGMTLAEIERWIGEYIRRRKNVVGR
Ga0318576_104389531	3300031796	Soil	MASPQTTQADRVARSLKRLGFRLTRIGRSFTIIDTTGGPATGSKTGMSLGEVERWIGEHVKSRLNVNDAERPPWDD
Ga0318550_104370391	3300031797	Soil	MATTPTTQADRVARSLKRLGFRLTRIGRTFTIVDNAGDLATGTKTGMTLAEIERWIGEHIRRRQNVVGR
Ga0310917_103102482	3300031833	Soil	MVTTPTTQADRVSRSLKRLGFRLNRIGRTFTIVDNVGDHTGTKTGMTLAEIERWIGEYIRRRKNVVGR
Ga0310917_106316403	3300031833	Soil	MASPQTTQADRVARSLKRLGFRLTRIGRSFTIIDSTGRPATGSKTGMSLDEVERWIGEHVKSRLNVNDAERPPWED
Ga0310917_110248922	3300031833	Soil	MASPQTTQADRVARSLKRLGFRLTRIGRSFTIIDNTGGPATGSKTGMSLAEVERWISEHIKPRRNVNDEERPLWED
Ga0318511_104476231	3300031845	Soil	MATTPTTQADRVARSLKRLGFRLTRIGRSFTIIDNTGGPATGSKTGMSLAEVERWISEHIKPRRNVNDEERPLWED
Ga0306919_103628981	3300031879	Soil	MATTPTTQADRVARSLKRLGFRLTRIGRTFTIVDNAGDLVTGTKTGMTPAEIERWIGEHIRRRQNVVGR
Ga0306919_105124842	3300031879	Soil	MATTPTTQADRIARSLKRLGFRLTRIGRSFTIIDAAGERVAARMSVAQVENWIREHIKPR
Ga0306919_110366042	3300031879	Soil	MASPQTTQADRVARSLKRLGFRLTRIGRSFTIIDNTGGPATGSKTGMSLAEVERWISEHIKPRRNVNDDERPPWKD
Ga0306919_115038012	3300031879	Soil	MASPLTTQADRVARSLKRLGFRLTRVGRTFTIVDSAGELAPGTKTGMPLAEIELWIGEHIKPRQSGAR
Ga0306925_118513793	3300031890	Soil	PLTTQADRVARSLKRLGFRLTRVGRTFTIVDSAGELAPGTKTGMPLAEIELWIGEHIKPRQSGAR
Ga0306923_105535225	3300031910	Soil	APGGAEALMASPQTTQADRVARSLKRLGFRLTRIGRSFTIIDSTGRPATGSKTGMSLDEVERWIGEHVKSRLNVNDAERPPWDD
Ga0306923_115618382	3300031910	Soil	MARPQTTQADRVARSLKRLGFQLTRIGRSFTVVDGAGALATGSKTGLTLAEIERWIGEHIKPRRKDRPPWED
Ga0306921_103036061	3300031912	Soil	MASPQTTQADRVARSLKRLGFRLTRIGRSFTIIDNTGGPATGSKTGMSLAEVERWISEHI
Ga0306921_113964411	3300031912	Soil	RAIAGPAGRAGTGGAEGEGETLTATTPTTQADRVSRSLKRLGFRLTRIGRTFTIVDNVGDHTGTKTGMTLAEIERWIGEYIRRRKNVVGR
Ga0306921_114007262	3300031912	Soil	MATTPTTQADRVSRSLKRLGFRLTRIGRTFTIVDNVGDPATGTKTGMTLAEIERWIGEYIRRRKNVVGR
Ga0306921_119099851	3300031912	Soil	MARPQTTQADRVARSLKRLGFRLTRIGRSFTIIDNTGGPATGSKTGMSLAEVERWISEHI
Ga0310916_115371251	3300031942	Soil	MARPQTTQADRVARSLKRLGFRLTRIGRSFTIIDNTGGPATGSKTGMSLAEVERWISEHIKPRRNVNDEERPT
Ga0310913_103904301	3300031945	Soil	MASPQTTQADRVARSLKRLGFRLTRIGRSFTIIDNTGGPATGSKTGMSLAEVERWISE
Ga0310909_105915843	3300031947	Soil	MASPQTTQADRVARSLKRLGFRLTRIGRSFTIIDSTGRPATGSKTGMSLDEVERWIGEHVKSRLNVNDAERPPWDD
Ga0310909_114934101	3300031947	Soil	RDRSRRKACGEEALMATTPTTQADRVARSLKRLGFRLTRIGRTFTIVDNAGDLVTGTKTGMTLAEIERWIGEHIRRRQNVVGRSGRSGYFSHK
Ga0306926_104868781	3300031954	Soil	GRDRRKACGEEALMATTPTTQADRVARSLKRLGFRLTRIGRTFTIVDNAGDLVTGTKTGMTLAEIERWIGEHIRRRQNVVGR
Ga0306926_116804161	3300031954	Soil	MASPQTTQADRVARSLKRLGFRLTRIGRSFTIIDNTGGPATGSKTGMSLAEVERWISEHIKPRRNVNDEERPT
Ga0306922_106534261	3300032001	Soil	MASPQTTQADRVARSLKRLGFRLTRIGRSFTIIDTTGGPATGSKTGMSLGEIERWIGKHVKSRLNVNDAERPPWED
Ga0318507_105450971	3300032025	Soil	GRHRGRRAPGGAEALMASPQTTQADRVARSLKRLGFRLTRIGRSFTIIDSTGRPATGSKTGMSLAEVERWISEHIKPRRNVNDEERPLWED
Ga0318510_101227444	3300032064	Soil	MATTPTTQADRVARSLKRLGFRLTRIGRTFTIVDNAGDLVTGTKIGMTLAEIERWIGEHIRRRQNVVG
Ga0318540_102900441	3300032094	Soil	TPTTQADRVARSLKRLGFRLTRIGRTFTIVDNAGDLVTGTKTGMTLAEIERWIGEHIRRRQNVVGRSGRSGYFSHK
Ga0318540_106469112	3300032094	Soil	PGRAIAGPAGRAGTGGAEGEGETLMATTPTTQADRVSRSLKRLGFRLTRIGRTFTIVDNVGDHTGTKTGMTLAEIERWIGEYIRRRKNVVGR
Ga0306920_1002637365	3300032261	Soil	MATTPTTQADRVARSLKRLGFRLTRIGRSFTIIDSTGRPATGSKTRMSLGEVERWIGEHVKSRLNVNDAERPPWED
Ga0306920_1003043716	3300032261	Soil	MARPTTQADRVARSLKRLGYRLTRIGRSFTIIDSAGRPAAGSKTGMSLAEVEHWIAGHVKPRLNVNDNERPPWEE
Ga0306920_1003144665	3300032261	Soil	MAVPQTTQADRVARSLKRLGFRMTRIGRTFTIVDNAGELAAGTKTGMTLAEIERWIGEHIRRRQNVVGR
Ga0306920_1003592756	3300032261	Soil	MARPQTTQADRVARSLKRLGFRLTRIGRSFTIIDNTGGPATGSKTGMSLAEVERWISEHIKPRRNVNDEERPTCED
Ga0306920_1003886485	3300032261	Soil	MATTPTTQADRVARSLKRLGFRLTRIGRTFTIVDNAGDLVTGTKIGMTLAEIERWIGEHIRRRQNVVGR
Ga0306920_1006992073	3300032261	Soil	MATTPTTQADRIARSLKRLGFRLTRIGRSFTIIDAAGERVAARMSVAQVENWIREHIKPRRNGAR
Ga0306920_1020667382	3300032261	Soil	MAGPPTTQADRVARSLKRLGFRLTRIGRSFTITDSAGGPATGSKTGMTLAEVERWIGEHVKPKRPAKSAERPPWED
Ga0306920_1044509221	3300032261	Soil	RDRSRRKACGEEALMATTPTTQADRVARSLKRLGFRLTRIGRTFTIVDNAGDLVTGTKTGMTPAEIERWIGEHIRRRQNVVGR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F093423

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences