Metagenome / Metatranscriptome Family F093414

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F093414
Family Type	Metagenome / Metatranscriptome
Number of Sequences	106
Average Sequence Length	54 residues
Representative Sequence	MAKILVAFLMSLVLFGCNNNSSNDVSTADSEPAQEAPVEEAPVEEAPADTE
Number of Associated Samples	60
Number of Associated Scaffolds	106

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	57.14 %
% of genes near scaffold ends (potentially truncated)	40.57 %
% of genes from short scaffolds (< 2000 bps)	83.02 %
Associated GOLD sequencing projects	51
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (50.943 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh (89.623 % of family members)
Environment Ontology (ENVO)	Unclassified (89.623 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (100.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 25.49% β-sheet: 0.00% Coil/Unstructured: 74.51%
Feature Viewer

Powered by Feature Viewer

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF00912	Transgly	24.53
PF12893	Lumazine_bd_2	5.66
PF11306	DUF3108	5.66
PF00011	HSP20	3.77
PF05050	Methyltransf_21	3.77
PF07715	Plug	1.89
PF00593	TonB_dep_Rec	1.89
PF13469	Sulfotransfer_3	1.89
PF01467	CTP_transf_like	1.89
PF04134	DCC1-like	0.94
PF04366	Ysc84	0.94
PF09335	SNARE_assoc	0.94

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG0744	Penicillin-binding protein 1B/1F, peptidoglycan transglycosylase/transpeptidase	Cell wall/membrane/envelope biogenesis [M]	24.53
COG4953	Membrane carboxypeptidase/penicillin-binding protein PbpC	Cell wall/membrane/envelope biogenesis [M]	24.53
COG5009	Membrane carboxypeptidase/penicillin-binding protein	Cell wall/membrane/envelope biogenesis [M]	24.53
COG0071	Small heat shock protein IbpA, HSP20 family	Posttranslational modification, protein turnover, chaperones [O]	3.77
COG0398	Uncharacterized membrane protein YdjX, related to fungal oxalate transporter, TVP38/TMEM64 family	Function unknown [S]	0.94
COG0586	Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family	Cell wall/membrane/envelope biogenesis [M]	0.94
COG1238	Uncharacterized membrane protein YqaA, VTT domain	Function unknown [S]	0.94
COG2930	Lipid-binding SYLF domain, Ysc84/FYVE family	Lipid transport and metabolism [I]	0.94
COG3011	Predicted thiol-disulfide oxidoreductase YuxK, DCC family	General function prediction only [R]	0.94

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	50.94 %
Unclassified	root	N/A	49.06 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	50.94 %
Unclassified	root	N/A	49.06 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	50.94 %
Unclassified	root	N/A	49.06 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.06 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	47.17 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.06 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	32.08 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2.83 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.06 %
Nitrosomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	28.30 %
Maricaulales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Maricaulales	1.89 %
Cellvibrionales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales	1.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.06 %
unclassified Nitrosomonadales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales	16.98 %
Methylophilaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae	2.83 %
Robiginitomaculaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Maricaulales → Robiginitomaculaceae	1.89 %
Porticoccaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Porticoccaceae	1.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.06 %
OM43 clade	clade	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade	16.04 %
unclassified Methylophilaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae	2.83 %
Porticoccus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Porticoccaceae → Porticoccus	1.89 %
Robiginitomaculum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Maricaulales → Robiginitomaculaceae → Robiginitomaculum	1.89 %
Methylophilales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → Methylophilales bacterium	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.06 %
Methylophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	2.83 %
unclassified Robiginitomaculum	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Maricaulales → Robiginitomaculaceae → Robiginitomaculum → unclassified Robiginitomaculum	1.89 %
unclassified Porticoccus	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Porticoccaceae → Porticoccus → unclassified Porticoccus	1.89 %
Methylophilales bacterium HTCC2181	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade → Methylophilales bacterium HTCC2181	1.89 %
Methylophilales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → Methylophilales bacterium	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.06 %
Methylophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	2.83 %
Robiginitomaculum sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Maricaulales → Robiginitomaculaceae → Robiginitomaculum → unclassified Robiginitomaculum → Robiginitomaculum sp.	1.89 %
Porticoccus sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Porticoccaceae → Porticoccus → unclassified Porticoccus → Porticoccus sp.	1.89 %
Methylophilales bacterium HTCC2181	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade → Methylophilales bacterium HTCC2181	1.89 %
Methylophilales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → Methylophilales bacterium	0.94 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000117\|DelMOWin2010_c10001405	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade → Methylophilales bacterium HTCC2181	15477	Open in IMG/M
3300001778\|ACM18_1030709	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade	1034	Open in IMG/M
3300002133\|S2T7BSa_1511137	All Organisms → cellular organisms → Bacteria	893	Open in IMG/M
3300006025\|Ga0075474_10016408	All Organisms → cellular organisms → Bacteria → Proteobacteria	2741	Open in IMG/M
3300006027\|Ga0075462_10234820	All Organisms → cellular organisms → Bacteria	546	Open in IMG/M
3300006867\|Ga0075476_10022073	All Organisms → cellular organisms → Bacteria → Proteobacteria	2735	Open in IMG/M
3300009445\|Ga0115553_1122195	Not Available	1089	Open in IMG/M
3300010368\|Ga0129324_10068394	All Organisms → cellular organisms → Bacteria	1584	Open in IMG/M
3300016724\|Ga0182048_1054892	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	547	Open in IMG/M
3300016729\|Ga0182056_1161016	Not Available	512	Open in IMG/M
3300016732\|Ga0182057_1101865	Not Available	514	Open in IMG/M
3300016749\|Ga0182053_1229480	Not Available	610	Open in IMG/M
3300016754\|Ga0182072_1185047	Not Available	585	Open in IMG/M
3300016771\|Ga0182082_1522555	All Organisms → cellular organisms → Bacteria → Proteobacteria	741	Open in IMG/M
3300016787\|Ga0182080_1094937	Not Available	580	Open in IMG/M
3300017818\|Ga0181565_10046350	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3151	Open in IMG/M
3300017818\|Ga0181565_10051927	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade	2961	Open in IMG/M
3300017818\|Ga0181565_10152571	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade	1613	Open in IMG/M
3300017818\|Ga0181565_10161573	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade	1559	Open in IMG/M
3300017818\|Ga0181565_10283463	Not Available	1116	Open in IMG/M
3300017818\|Ga0181565_10340789	Not Available	999	Open in IMG/M
3300017818\|Ga0181565_10443572	All Organisms → cellular organisms → Bacteria → Proteobacteria	850	Open in IMG/M
3300017818\|Ga0181565_10504007	Not Available	786	Open in IMG/M
3300017818\|Ga0181565_10718840	Not Available	632	Open in IMG/M
3300017818\|Ga0181565_10818579	Not Available	584	Open in IMG/M
3300017824\|Ga0181552_10024200	All Organisms → cellular organisms → Bacteria → Proteobacteria	3775	Open in IMG/M
3300017824\|Ga0181552_10151234	Not Available	1236	Open in IMG/M
3300017824\|Ga0181552_10241922	Not Available	912	Open in IMG/M
3300017824\|Ga0181552_10258397	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Maricaulales → Robiginitomaculaceae → Robiginitomaculum → unclassified Robiginitomaculum → Robiginitomaculum sp.	874	Open in IMG/M
3300017824\|Ga0181552_10579069	Not Available	523	Open in IMG/M
3300017949\|Ga0181584_10345461	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Porticoccaceae → Porticoccus → unclassified Porticoccus → Porticoccus sp.	942	Open in IMG/M
3300017949\|Ga0181584_10349906	Not Available	934	Open in IMG/M
3300017951\|Ga0181577_10355338	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade	940	Open in IMG/M
3300017951\|Ga0181577_10718675	Not Available	607	Open in IMG/M
3300017951\|Ga0181577_10896744	Not Available	529	Open in IMG/M
3300017956\|Ga0181580_10500399	Not Available	794	Open in IMG/M
3300017956\|Ga0181580_11022619	Not Available	510	Open in IMG/M
3300017957\|Ga0181571_10361178	Not Available	906	Open in IMG/M
3300017958\|Ga0181582_10425729	Not Available	840	Open in IMG/M
3300017962\|Ga0181581_10191897	All Organisms → cellular organisms → Bacteria → Proteobacteria	1356	Open in IMG/M
3300017962\|Ga0181581_10332020	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade	970	Open in IMG/M
3300017962\|Ga0181581_10947570	Not Available	504	Open in IMG/M
3300017964\|Ga0181589_10154699	All Organisms → cellular organisms → Bacteria → Proteobacteria	1623	Open in IMG/M
3300017964\|Ga0181589_10378350	Not Available	937	Open in IMG/M
3300017964\|Ga0181589_10741435	Not Available	613	Open in IMG/M
3300017964\|Ga0181589_10883743	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	549	Open in IMG/M
3300017968\|Ga0181587_10032217	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3966	Open in IMG/M
3300017968\|Ga0181587_10214717	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade	1326	Open in IMG/M
3300017968\|Ga0181587_10567385	Not Available	729	Open in IMG/M
3300017969\|Ga0181585_10551164	Not Available	768	Open in IMG/M
3300017985\|Ga0181576_10106102	Not Available	1886	Open in IMG/M
3300017985\|Ga0181576_10520652	Not Available	728	Open in IMG/M
3300017985\|Ga0181576_10889931	Not Available	522	Open in IMG/M
3300017986\|Ga0181569_10272573	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade	1177	Open in IMG/M
3300017986\|Ga0181569_10672343	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade	687	Open in IMG/M
3300018039\|Ga0181579_10055540	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	2614	Open in IMG/M
3300018049\|Ga0181572_10015961	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	5043	Open in IMG/M
3300018049\|Ga0181572_10267354	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	1094	Open in IMG/M
3300018049\|Ga0181572_10331070	All Organisms → cellular organisms → Bacteria → Proteobacteria	963	Open in IMG/M
3300018049\|Ga0181572_10336292	Not Available	954	Open in IMG/M
3300018049\|Ga0181572_10496651	Not Available	752	Open in IMG/M
3300018413\|Ga0181560_10016975	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	5403	Open in IMG/M
3300018413\|Ga0181560_10069932	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	1985	Open in IMG/M
3300018417\|Ga0181558_10126105	All Organisms → cellular organisms → Bacteria	1551	Open in IMG/M
3300018417\|Ga0181558_10511640	Not Available	624	Open in IMG/M
3300018418\|Ga0181567_10563731	Not Available	739	Open in IMG/M
3300018418\|Ga0181567_10861319	Not Available	571	Open in IMG/M
3300018426\|Ga0181566_10541447	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	814	Open in IMG/M
3300018426\|Ga0181566_10800489	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade	643	Open in IMG/M
3300018426\|Ga0181566_10811763	Not Available	638	Open in IMG/M
3300018428\|Ga0181568_10500475	Not Available	968	Open in IMG/M
3300018428\|Ga0181568_10655485	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	823	Open in IMG/M
3300018876\|Ga0181564_10520697	Not Available	636	Open in IMG/M
3300018876\|Ga0181564_10632018	Not Available	566	Open in IMG/M
3300019266\|Ga0182061_1367553	Not Available	524	Open in IMG/M
3300019272\|Ga0182059_1177465	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade	1084	Open in IMG/M
3300019281\|Ga0182077_1107032	Not Available	540	Open in IMG/M
3300019459\|Ga0181562_10264230	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade	870	Open in IMG/M
3300020055\|Ga0181575_10178880	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade	1260	Open in IMG/M
3300020055\|Ga0181575_10287659	Not Available	936	Open in IMG/M
3300020056\|Ga0181574_10310343	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade	955	Open in IMG/M
3300020056\|Ga0181574_10663264	Not Available	552	Open in IMG/M
3300020173\|Ga0181602_10080820	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	1648	Open in IMG/M
3300020207\|Ga0181570_10011869	All Organisms → cellular organisms → Bacteria → Proteobacteria	5708	Open in IMG/M
3300020207\|Ga0181570_10515275	Not Available	546	Open in IMG/M
3300020810\|Ga0181598_1021718	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade → Methylophilales bacterium HTCC2181	3727	Open in IMG/M
3300021371\|Ga0213863_10141332	Not Available	1106	Open in IMG/M
3300021959\|Ga0222716_10665009	Not Available	558	Open in IMG/M
3300021961\|Ga0222714_10382981	Not Available	747	Open in IMG/M
3300022909\|Ga0255755_1206647	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Maricaulales → Robiginitomaculaceae → Robiginitomaculum → unclassified Robiginitomaculum → Robiginitomaculum sp.	745	Open in IMG/M
3300022923\|Ga0255783_10125240	All Organisms → cellular organisms → Bacteria → Proteobacteria	1293	Open in IMG/M
3300022929\|Ga0255752_10321446	Not Available	645	Open in IMG/M
3300022935\|Ga0255780_10049427	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → Methylophilales bacterium	2753	Open in IMG/M
3300023087\|Ga0255774_10067091	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade	2134	Open in IMG/M
3300023105\|Ga0255782_10028658	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3249	Open in IMG/M
3300023105\|Ga0255782_10359985	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	662	Open in IMG/M
3300023105\|Ga0255782_10360026	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	662	Open in IMG/M
3300023108\|Ga0255784_10572442	Not Available	501	Open in IMG/M
3300023116\|Ga0255751_10024728	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	4535	Open in IMG/M
3300023116\|Ga0255751_10369740	Not Available	720	Open in IMG/M
3300023119\|Ga0255762_10504256	Not Available	567	Open in IMG/M
3300023175\|Ga0255777_10427001	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	706	Open in IMG/M
3300023178\|Ga0255759_10261904	All Organisms → cellular organisms → Bacteria → Proteobacteria	1106	Open in IMG/M
3300028115\|Ga0233450_10028211	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Porticoccaceae → Porticoccus → unclassified Porticoccus → Porticoccus sp.	3707	Open in IMG/M
3300028115\|Ga0233450_10173353	Not Available	1039	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	99.06%
Unclassified	Environmental → Aquatic → Unclassified	0.94%

Habitat	Taxonomy	Distribution
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	89.62%
Coastal	Environmental → Aquatic → Marine → Coastal	4.72%
Unclassified	Environmental → Aquatic → Marine → Unclassified	1.89%
Oceanic	Environmental → Aquatic → Marine → Oceanic	0.94%
Pelagic	Environmental → Aquatic → Marine → Pelagic	0.94%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	0.94%
Unclassified	Environmental → Aquatic → Unclassified → Unclassified	0.94%

Habitat	Taxonomy	Distribution
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	89.62%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	4.72%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	1.89%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	0.94%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	0.94%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	0.94%
Unclassified	Environmental → Aquatic → Unclassified → Unclassified → Unclassified	0.94%

Habitat	Taxonomy	Distribution
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	89.62%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	2.83%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	1.89%
Marine Plankton	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine Plankton	0.94%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	0.94%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	0.94%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	0.94%
Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine	0.94%
Marine	Environmental → Aquatic → Unclassified → Unclassified → Unclassified → Marine	0.94%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000117	Marine microbial communities from Delaware Coast, sample from Delaware MO Winter December 2010	Environmental	Open in IMG/M
3300001778	Marine plankton microbial communities from the Amazon River plume, Atlantic Ocean - ACM18, ROCA_DNA027_0.2um_3g	Environmental	Open in IMG/M
3300002133	Marine microbial communities from the Baltic Sea, analyzing arctic terrigenous carbon compounds - S2T7BSa (116f)	Environmental	Open in IMG/M
3300006025	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_DNA	Environmental	Open in IMG/M
3300006027	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_<0.8_DNA	Environmental	Open in IMG/M
3300006867	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_<0.8_DNA	Environmental	Open in IMG/M
3300009445	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110331	Environmental	Open in IMG/M
3300010368	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.2_DNA	Environmental	Open in IMG/M
3300016724	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 011507AT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016729	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 101402AT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016732	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 101403AT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016749	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 011512AT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016754	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071405BT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016771	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071412BT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016787	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071411AT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017818	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101401AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017824	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011501BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017949	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071406AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017951	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101413BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017956	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071403BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017957	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101407AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017958	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017962	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071404AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017964	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071410BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017968	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071409AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017969	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071407BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017985	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101412BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017986	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101405AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018039	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071402CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018049	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101408AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018413	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011509CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018417	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011507BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018418	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101403AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018426	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101402AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018428	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101404AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018876	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011513CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300019266	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 101407AT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019272	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 101405AT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019281	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071409AT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019459	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011511BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300020055	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101411CT metaG (spades assembly)	Environmental	Open in IMG/M
3300020056	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101410AT metaG (spades assembly)	Environmental	Open in IMG/M
3300020173	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041408US metaG (spades assembly)	Environmental	Open in IMG/M
3300020207	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101406AT metaG (spades assembly)	Environmental	Open in IMG/M
3300020810	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041404US metaG (spades assembly)	Environmental	Open in IMG/M
3300021371	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO497	Environmental	Open in IMG/M
3300021959	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_13D	Environmental	Open in IMG/M
3300021961	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3D	Environmental	Open in IMG/M
3300022909	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011501BT metaG	Environmental	Open in IMG/M
3300022923	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011507BT metaG	Environmental	Open in IMG/M
3300022929	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011512CT metaG	Environmental	Open in IMG/M
3300022935	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405AT metaG	Environmental	Open in IMG/M
3300023087	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101407AT metaG	Environmental	Open in IMG/M
3300023105	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101408AT metaG	Environmental	Open in IMG/M
3300023108	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101403AT metaG	Environmental	Open in IMG/M
3300023116	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412BT metaG	Environmental	Open in IMG/M
3300023119	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101401AT metaG	Environmental	Open in IMG/M
3300023175	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101402AT metaG	Environmental	Open in IMG/M
3300023178	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101404AT metaG	Environmental	Open in IMG/M
3300028115	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011501CT (spades assembly)	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
DelMOWin2010_1000140515	3300000117	Marine	MAKLLVAFLMSLVLFGCNNNPSSDASASDTEPTQEVPAEDAPMDEAPAENADSE*
ACM18_10307092	3300001778	Marine Plankton	MMRSNSTSNSFFQRKIMAKILVAFLMSLVLFGCNNNSSNDVSTADSEPAQEAPVEE
S2T7BSa_15111371	3300002133	Marine	IMAKLLVAFLMSLVLFGCNNNPSSDASASDTEPTEEVPAEDAPMDEAPAENADSE*
Ga0075474_100164084	3300006025	Aqueous	MAKLLVAFLMSLVLFGCNNNPSSDVSASDTEPTQEVPAEDAPMDEAPAENADSE*
Ga0075462_102348202	3300006027	Aqueous	MAKFLVAFLMSLVLFGCNNNSSPDVSASDPEPTQEAPAEDAPMGEAPAENSDSE*
Ga0075476_100220732	3300006867	Aqueous	MAKLLVAFLMSLVLFGCNNNPSSDASASDTEPTEEVPAEDAPMDEAPAENADSE*
Ga0115553_11221953	3300009445	Pelagic Marine	MAKLLVAFLMSLVLFGCNNNSSSDVSASDTEPTQEVPAEDAPMDEAPAENADSE*
Ga0129324_100683942	3300010368	Freshwater To Marine Saline Gradient	MAKFLIAFLMSLVLFGCNNNSSPDVSASDPEPTQEAPAEDAPMGEAPAENSDSE*
Ga0182048_10548922	3300016724	Salt Marsh	MAKLLVAFLMSLVLFGCNNNPSSDVSASDTEPTQEVPAEDAPMDEAPAE
Ga0182056_11610162	3300016729	Salt Marsh	NSFFQRKIMAKILVAFLMSLVLFGCNNNSSNDVSTADSEPAQEAPVEEASLEEAPADTE
Ga0182057_11018652	3300016732	Salt Marsh	FFQRKIMAKIFVAFLMSLVLFGCNNNSSNDVSTADSEPAQEAPVEEAPADTE
Ga0182053_12294802	3300016749	Salt Marsh	MAKIFVAFLMSLVLFGCNNNSSNDVSTADSEPAQEAPVEEAPADTE
Ga0182072_11850471	3300016754	Salt Marsh	PPLKIVIVILYTNDMMRSNSTSNSFFQRKIMAKILVAFLMSLVLFGCNNNSSNDVSTADSEPAQEAPVEEAPADTE
Ga0182082_15225552	3300016771	Salt Marsh	MAKIFVAFLMSLVLFGCNNNSSNDVSTADSEPAQEAPVEEAPLEEAPADTE
Ga0182080_10949372	3300016787	Salt Marsh	KKVIVFLYTNDMMRSNSTSNSFFQRKIMAKIFVAFLMSLVLFGCNNNSSNDVSTADSEPAQEAPVEEAPVEEAPADTE
Ga0181565_100463504	3300017818	Salt Marsh	MMRSNSTSNSFFQRKIMAKIFVAFLMSLVLFGCNNNSSNDVSTADSEPAQEAPVEEAPVEEAPADTE
Ga0181565_100519274	3300017818	Salt Marsh	MAKILVAFLMSLVLFGCNNNSSNDASTSDSEPVQEAPVEEAPVDSEPVQEAPAETE
Ga0181565_101525712	3300017818	Salt Marsh	MAKILVAFLMSLVLFGCNNNSSNDVSTADTEPAQEAPADDTPADSEPAQEAPAETE
Ga0181565_101615733	3300017818	Salt Marsh	MAKILVAFLMSLVLFGCNNNSSNDVSTADSEPTQEAPVDEAPVDSEPAQEAPADTE
Ga0181565_102834631	3300017818	Salt Marsh	MAKILVAFLISLVLFGCNNNSSSDVSTADSEPAQEAPVEEAPADTE
Ga0181565_103407892	3300017818	Salt Marsh	MMRSNSTSNSFFQRKIMAKILVAFLMSLVLFGCNNNSSNDVSTADSEPAQEAPVEEAPADTE
Ga0181565_104435722	3300017818	Salt Marsh	MAKILVAFLMSLVLFGCNNNSSHDVSTADSEPAQEAPAEEAPVDSEPAQEAPADTE
Ga0181565_105040071	3300017818	Salt Marsh	MAKILVAFLMSLVLFGCNNNSSNDVSTADSEPAQEAPVEEAPVEEAPADTE
Ga0181565_107188402	3300017818	Salt Marsh	MAKILVAFLMSLVLFGCNNNSSNDVSTADSEPVQEAPVEEAPVNSEPAQEAPAETE
Ga0181565_108185791	3300017818	Salt Marsh	MAKILVAFLMTLVLFGCNNNSSYDVSTAESEPAQEAPAEEAPLDSEPAQEAPADAE
Ga0181552_100242002	3300017824	Salt Marsh	MAKIFVAFLMSLVLFGCNNNSSNDVSTADSEPAQEAPVEEAPVEEAPADTE
Ga0181552_101512342	3300017824	Salt Marsh	MAKLLVAFLMSLVLFGCNNNPSSDVSASDTEPTQEVPAEDAPMDEAPAENADSE
Ga0181552_102419222	3300017824	Salt Marsh	MAKLLVAFLMSLVLFGCNNNPSSDVSALDTEPTQEVPVEDAPMDEAPAESADSE
Ga0181552_102583971	3300017824	Salt Marsh	MAKFLVAFLMSLVLFGCNNNSSPDVSASDPEPTQEAPAEDAPMGEAPAENSDSE
Ga0181552_105790692	3300017824	Salt Marsh	MAKILVAFLMSLVLFGCNNNSSNDVSTADSEPAQEAPVEEAPAEEAPADTE
Ga0181584_103454611	3300017949	Salt Marsh	MAKILVAFLMSLVLFGCNNNSSNDVSTADSEPAQEAPVEEAPADTE
Ga0181584_103499063	3300017949	Salt Marsh	MAKILVALLMSLVLFGCNNNSSNDVSTADSEPAQEAPIDDTPADSEPTQEAPAETE
Ga0181577_103553381	3300017951	Salt Marsh	MRSNSTSNSFFQRKIMAKILVAFLMSLVLFGCNNNSSNDASTSDSEPVQEAPVEEAPVDSEPVQEAPAETE
Ga0181577_107186753	3300017951	Salt Marsh	VAFLMSLVLFGCNNNSSNDVSTADSEPAQEAPVEEAPLEEAPADTE
Ga0181577_108967441	3300017951	Salt Marsh	MAKILVAFLMSLVLFGCNNNSSHDVSTADSEPAQEAPVDSEPAQEAPADTE
Ga0181580_105003993	3300017956	Salt Marsh	MAKILVAFLMSLVLFGCNNNSSNDVSTADTEPAQEAPVDDTPADSEPAQEVPAETE
Ga0181580_110226192	3300017956	Salt Marsh	VAFLMSLVLFGCNNNSSNDVSTADSEPAQEAPVEEAPAEEAPADTE
Ga0181571_103611781	3300017957	Salt Marsh	MAKILVAFLMSLVLFGCNNNSSNDDSTADSEPVQEAPVEEAPIDSEPAQEAPADTE
Ga0181582_104257293	3300017958	Salt Marsh	MAKILVAFLISLVLFGCNNNSSSDVSTADTEPAQEAPVDDTPADSEPAQEVPAETE
Ga0181581_101918972	3300017962	Salt Marsh	MIRSNSTSNSFFQRKIMAKIFVAFLMSLVLFGCNNNSSNDVSTADSEPAQEAPVEEAPVEEAPADTE
Ga0181581_103320201	3300017962	Salt Marsh	MMRSNSLLNSFFQRKIMAKILVAFLMSLVLFGCNNNSSNDVSTADSEPAQEAPVEEAPADTE
Ga0181581_109475702	3300017962	Salt Marsh	LLNSFFQRKIMAKILVAFLMSLVLFGCNNNSSNDASTSDSEPVQEAPVEEAPVDSEPVQEAPAETE
Ga0181589_101546993	3300017964	Salt Marsh	MAKLLVAFLMSLVLFGCNNNPSSDVSALDTEPTQEVPVEDAPMYEAPAESADSE
Ga0181589_103783503	3300017964	Salt Marsh	MAKILVVFLMSLVLFGCNNNSSNDVSTADSEPAQEAPVEEAPIDSEPAQEAPADTE
Ga0181589_107414351	3300017964	Salt Marsh	LVLFGCNNSSNDVSTADTEPAQEAPVDDTPADSEPAQEAPAETE
Ga0181589_108837432	3300017964	Salt Marsh	MRSNSTSNSFFQRKIMAKIFVAFLMSLVLFGCNNNSSNDVSTADSEPAQEAPVEEAPVEEAPADTE
Ga0181587_100322171	3300017968	Salt Marsh	MAKLLVAFLMSLVLFGCNNNPSSDVSALDTEPTQEVPVEDAPMDEAP
Ga0181587_102147171	3300017968	Salt Marsh	MAKILVAFLMSLVLFGCNNNSSHDVSTADSESAQEAPVEEAPI
Ga0181587_105673851	3300017968	Salt Marsh	NNSSHDVSTADSEPAQEAPAEEAPVDSEPAQEAPADTE
Ga0181585_105511643	3300017969	Salt Marsh	LVAFLMSLVLFGCNNNSSNDVSTADSEPVQEAPVEEAPIDSEPAQEAPADTE
Ga0181576_101061022	3300017985	Salt Marsh	MAKILVAFLMTLVLFGCNNNSSNDVSTADSEPAQEAPAEEAPLDSEPAQEAPADAE
Ga0181576_105206523	3300017985	Salt Marsh	KIMAKILVAFLMSLVLFGCNNNSSNDVSTADSEPAQEAPVEEAPVEEAPADTE
Ga0181576_108899312	3300017985	Salt Marsh	MAKILVAFLISLVLFGCNNNSSNDVSTADSETAQEAPLEEAPVDSEPAQEAPAETE
Ga0181569_102725732	3300017986	Salt Marsh	MAKILVAFLMSLVLFGCNNSSNDVSTADTEPAQEAPVDDTPADSEPAQEAPADTE
Ga0181569_106723432	3300017986	Salt Marsh	MAKILVAFLMSLVLFGCNNNSSHDVSTADTEAAQEAPADDTPADSEPAQEAPAETE
Ga0181579_100555403	3300018039	Salt Marsh	MAKLLVAFLMSLVLFGCNNNPSSDVSASDTEPTQEVPAEDAPMDEAPAESADSE
Ga0181572_100159614	3300018049	Salt Marsh	VRIQFRILFLRKIMAKILVAFLMSLVLFGCNNNSSNDASTSDSEPVQEAPVEEAPVDSEPVQEAPAETE
Ga0181572_102673542	3300018049	Salt Marsh	LVAFLMSLVLFGCNNNPSSDVSALDTEPTQEVPVEDAPMDEAPAESADSE
Ga0181572_103310703	3300018049	Salt Marsh	MAKILVAFLMSLVLFGCNNNSSDDVSTSDSEPAQEAPAEEAPVDSEAAQEAPADTE
Ga0181572_103362923	3300018049	Salt Marsh	AFLMSLVLFGCNNNSSNDVSTADSEPAQEAPVEEAPVEEAPADTE
Ga0181572_104966513	3300018049	Salt Marsh	SLVLFGCNNNSSNDVSTADTEPAQEAPVDDTPADSEPAQEAPADTE
Ga0181560_100169753	3300018413	Salt Marsh	MMRSNSLLNSFFQRKIMAKILVAFLMSLVLFGCNNNSSNDVSTADSEPAQEAPVEEAPVEEAPADTE
Ga0181560_100699322	3300018413	Salt Marsh	MAKLLVAFLMSLVLFGCNNNPSSDASASDTEPTQEVPAEDAPMDEAPAENADSE
Ga0181558_101261053	3300018417	Salt Marsh	MIRSNSIWILFLRKIMAKFLVAFLMSLVLFGCNNNSSPDVSASDPEPTQEAPAEDAPMGEAPAENSDSE
Ga0181558_105116403	3300018417	Salt Marsh	ISLVLFGCNNNSSSDVSTADTEPAQEAPVDDTPADSEPAQEVPAETE
Ga0181567_105637313	3300018418	Salt Marsh	FGCNNNSSNDVSTADTEPAQEAPVDDTPADSEPAQEAPADTE
Ga0181567_108613192	3300018418	Salt Marsh	VAFLMSLVLFGCNNNSSNDVSTADTEPAQEAPVDDTSADSEPAQEAPAETE
Ga0181566_105414472	3300018426	Salt Marsh	MAKILVAFLMSLVLFGCNNSSNDVSTADTEPAQEAPVDDTSADSEPAQEAPAETE
Ga0181566_108004892	3300018426	Salt Marsh	MAKILVAFLMSLVLFGCNNNSSHDVSTADSEPAQEAPVEEAPVEEGPADKE
Ga0181566_108117632	3300018426	Salt Marsh	RKIMAKILVAFLISLVLFGCNNNTSNDVSTADSETAQEAPLEEAPVDSEPAQEAPAETE
Ga0181568_105004753	3300018428	Salt Marsh	KIFVAFLMSLVLFGCNNNSSNDVSTADSEPAQEAPVEEAPVEEAPADTE
Ga0181568_106554852	3300018428	Salt Marsh	MTKILVAFLMSLVLFGCNNNSSNDVSTADTEPAQEAPVDDTPADSEPAQEAPADTE
Ga0181564_105206973	3300018876	Salt Marsh	MAKILVAFLMSLVLFGCNNNSSNDVSTADSEPVQEAPVEEAPVEEAPADTE
Ga0181564_106320182	3300018876	Salt Marsh	AFLMSLVLFGCNNNSSNDVSTADSEPAQEAPVEEAPADTE
Ga0182061_13675532	3300019266	Salt Marsh	AKILVAFLMSLVLFGCNNNSSNDVSTADTEPAQEAPADDTPADSEPAQEAPAETE
Ga0182059_11774654	3300019272	Salt Marsh	LMSLVLFGCNNNSSNDVSTADSEPAQEAPVEEAPLEEAPADTE
Ga0182077_11070322	3300019281	Salt Marsh	KILVAFLMSLVLFGCNNNSSNDVSTADSEPAQEAPVEEAPADTE
Ga0181562_102642302	3300019459	Salt Marsh	MAKILVAFLMSLVLFGCNNNSSNDVSTADYEPAQEAPVEEAPVEEAPADAE
Ga0181575_101788803	3300020055	Salt Marsh	MAKILVAFLMSLVLFGCNNNSSNDVSTADSEPAQEAPVEEAPVEEAPVEEAPAETE
Ga0181575_102876593	3300020055	Salt Marsh	MAKILVAFLMSLVLFGCNNNSSNDVSTVDSEPAQEAPVEEAPVEEAPADTE
Ga0181574_103103432	3300020056	Salt Marsh	MAKILVAFLMSLVLFGCNNNSSNDVSTTDSEPAQEAPVDDTLAESEPAQEAPAETE
Ga0181574_106632641	3300020056	Salt Marsh	LMSLVLFGCNNNSSNDVSTADTEPAQEAPADDTPADSEPAQEAPAETE
Ga0181602_100808202	3300020173	Salt Marsh	WILFLRKIMAKFLVAFLMSLVLFGCNNNSSPDVSASDPEPTQEAPAEDAPMGEAPAENSDSE
Ga0181570_100118691	3300020207	Salt Marsh	MAKILVAFLMSLVLFGCNNNSSHDVSTADSEPAQEAPVEEAPVDSEPAQEAPADTE
Ga0181570_105152752	3300020207	Salt Marsh	SLVLFGCNNNSSNDVSTADSEPAQEAPVEEAPVEEAPADTE
Ga0181598_10217184	3300020810	Salt Marsh	LFLRKIMAKFLVAFLMSLVLFGCNNNSSPDVSASDPEPTQEAPAEDAPMGEAPAENSDSE
Ga0213863_101413322	3300021371	Seawater	MAKLLVAFLMSLVLFGCNNNPSSDASASDTEPTEEVPAEDAPMDEAPAENADSE
Ga0222716_106650092	3300021959	Estuarine Water	MAKILVAFLMSLVLFGCNNNSSNDVSTADSEPAQEAPVEEAPVEEAPVEEAPADTE
Ga0222714_103829811	3300021961	Estuarine Water	ILFLRKIMAKLLVAFLMSLVLFGCNNNPSSDVSASDSEPTQEVPAEDAPMDEAPAENSDS
Ga0255755_12066472	3300022909	Salt Marsh	MAKLLVAFLMSLVLFGCNNNSSPDVSASDPEPTQEAPAEDAPMGEAPAENSDSE
Ga0255783_101252401	3300022923	Salt Marsh	MAKLLVAFLMSLVLFGCNNNPSSDVSALDTEPTQEVPVEDAPMDE
Ga0255783_103532882	3300022923	Salt Marsh	MAKILVAFLISLVLFGCNNNSSSDVSTADSEPAQEAPVEEA
Ga0255752_103214462	3300022929	Salt Marsh	LVAFLMSLVLFGCNNNPSSDVSASDSEPTQEVPAEDAPMDEAPAENSDSE
Ga0255780_100494273	3300022935	Salt Marsh	LRKIMAKLLVAFLMSLVLFGCNNNPSSDVSALDTEPTQEVPVEDAPMDEAPAESADSE
Ga0255774_100670911	3300023087	Salt Marsh	KIVIVILYTNDMMRSNSTSNSFFQRKIMAKILVAFLMSLVLFGCNNNSSNDVSTADSEPAQEAPVEEAPADTE
Ga0255782_100286581	3300023105	Salt Marsh	MAKILVAFLMSLVLFGCNNNSSNDVSTADSEPAQEAPVEEAPAD
Ga0255782_103599852	3300023105	Salt Marsh	MAKILVAFLMSLVLFGCNNNSSNDVSTADTEPAQEAPVDDTPADSEPAQEAPADTE
Ga0255782_103600261	3300023105	Salt Marsh	MAKILVAFLMSLVLFGCNNNSSNDVSTADSEPVQEAPVEEAPIDSEPAQEAPADTE
Ga0255784_105724422	3300023108	Salt Marsh	FLMSLVLFGCNNNSSNDVSTADSEPAQEAPVEEAPVEEAPADTE
Ga0255751_100247285	3300023116	Salt Marsh	MAKILVAFLMSLVLFGCNNNSSSDVSTADTEPAQEAPVDDTPADSEPAQEVPAETE
Ga0255751_103697401	3300023116	Salt Marsh	MAKLLVAFLMSLVLFGCNNNPSSDVSALDTEPTQEVPAEDAPMDEAPAENADSE
Ga0255762_105042562	3300023119	Salt Marsh	MAKILVAFLMSLVLFGCNNNSSHDVSAADSESAQEAPAEEAPIDSESAQEAPADTE
Ga0255777_104270012	3300023175	Salt Marsh	MAKILVAFLMSLVLFGCNNSSNDVSTADTEPAQEAPVDDTPADSEPAQEVPAETE
Ga0255759_102619042	3300023178	Salt Marsh	MAKILVAFLMSLVLFGCNNNSSHDVSTADTEAAQEASADDTPADSETAQEAPAETE
Ga0233450_100282115	3300028115	Salt Marsh	MAKIFVAFLMSLVLFGCNNNSSNDVSTADSEPAQEAPVEEAPVEEAPVEEAPA
Ga0233450_101733532	3300028115	Salt Marsh	MAKLLVAFLMSLVLFGCNNNPSSDVSALDTEPTQEVPVEDAPMYEAP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F093414

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences