Metagenome Family F093390

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F093390
Family Type	Metagenome
Number of Sequences	106
Average Sequence Length	114 residues
Representative Sequence	MTPAQFVQAPLQGKLSVSRVFWLYGVVGSLVYGLLEFFIDPANAFLIRLYTVGAYAYSAYVIVGTYRCAVNCRTAGMARFVRISAIASLILLPVFMYFELSGALDGELSQFQQLNF
Number of Associated Samples	78
Number of Associated Scaffolds	106

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	23.58 %
% of genes near scaffold ends (potentially truncated)	25.47 %
% of genes from short scaffolds (< 2000 bps)	66.04 %
Associated GOLD sequencing projects	69
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.74

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (71.698 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated (17.924 % of family members)
Environment Ontology (ENVO)	Unclassified (41.509 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (40.566 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 65.28% β-sheet: 0.00% Coil/Unstructured: 34.72%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.74
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.74
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SCOP family	SCOP domain	Representative PDB	TM-score
f.40.1.1: V-type ATP synthase subunit C	d6m0rb_	6m0r	0.64094
a.25.1.1: Ferritin	d2fzfa1	2fzf	0.63639
f.72.1.1: Double antiporter-like subunits from respiratory complex I	d3rkod_	3rko	0.62637
d.144.1.0: automated matches	d3tl8a_	3tl8	0.61981
a.114.1.1: Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain	d1f5na1	1f5n	0.61179

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF00553	CBM_2	4.72
PF02798	GST_N	3.77
PF13545	HTH_Crp_2	2.83
PF00106	adh_short	1.89
PF01063	Aminotran_4	1.89
PF13410	GST_C_2	1.89
PF00583	Acetyltransf_1	1.89
PF06945	DUF1289	1.89
PF04397	LytTR	1.89
PF06961	DUF1294	0.94
PF17198	AveC_like	0.94
PF01965	DJ-1_PfpI	0.94
PF02735	Ku	0.94
PF00593	TonB_dep_Rec	0.94
PF13640	2OG-FeII_Oxy_3	0.94
PF13560	HTH_31	0.94
PF01894	UPF0047	0.94
PF03160	Calx-beta	0.94
PF06580	His_kinase	0.94
PF00561	Abhydrolase_1	0.94
PF01553	Acyltransferase	0.94
PF02518	HATPase_c	0.94
PF00069	Pkinase	0.94
PF08240	ADH_N	0.94
PF00384	Molybdopterin	0.94
PF06250	YhcG_C	0.94
PF04185	Phosphoesterase	0.94
PF12281	NTP_transf_8	0.94
PF13365	Trypsin_2	0.94
PF01928	CYTH	0.94
PF00300	His_Phos_1	0.94
PF00903	Glyoxalase	0.94
PF00072	Response_reg	0.94
PF12729	4HB_MCP_1	0.94
PF01037	AsnC_trans_reg	0.94
PF00873	ACR_tran	0.94
PF14833	NAD_binding_11	0.94
PF08281	Sigma70_r4_2	0.94
PF12680	SnoaL_2	0.94
PF13439	Glyco_transf_4	0.94
PF07859	Abhydrolase_3	0.94
PF00155	Aminotran_1_2	0.94
PF02472	ExbD	0.94
PF04240	Caroten_synth	0.94
PF04261	Dyp_perox	0.94
PF09084	NMT1	0.94
PF03473	MOSC	0.94
PF04972	BON	0.94
PF07715	Plug	0.94
PF04389	Peptidase_M28	0.94
PF03992	ABM	0.94
PF00589	Phage_integrase	0.94
PF02780	Transketolase_C	0.94
PF01850	PIN	0.94

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG5297	Cellulase/cellobiase CelA1	Carbohydrate transport and metabolism [G]	4.72
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.77
COG0115	Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase	Amino acid transport and metabolism [E]	3.77
COG3313	Predicted Fe-S protein YdhL, DUF1289 family	General function prediction only [R]	1.89
COG2837	Periplasmic deferrochelatase/peroxidase EfeB	Inorganic ion transport and metabolism [P]	0.94
COG4804	Predicted nuclease of restriction endonuclease-like (RecB) superfamily, DUF1016 family	General function prediction only [R]	0.94
COG4521	ABC-type taurine transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.94
COG3511	Phospholipase C	Cell wall/membrane/envelope biogenesis [M]	0.94
COG3326	Uncharacterized membrane protein YsdA, DUF1294 family	Function unknown [S]	0.94
COG3275	Sensor histidine kinase, LytS/YehU family	Signal transduction mechanisms [T]	0.94
COG2972	Sensor histidine kinase YesM	Signal transduction mechanisms [T]	0.94
COG2324	Uncharacterized membrane protein	Function unknown [S]	0.94
COG1273	Non-homologous end joining protein Ku, dsDNA break repair	Replication, recombination and repair [L]	0.94
COG0848	Biopolymer transport protein ExbD	Intracellular trafficking, secretion, and vesicular transport [U]	0.94
COG0715	ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.94
COG0657	Acetyl esterase/lipase	Lipid transport and metabolism [I]	0.94
COG0432	Thiamin phosphate synthase YjbQ, UPF0047 family	Coenzyme transport and metabolism [H]	0.94

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	71.70 %
Unclassified	root	N/A	28.30 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	71.70 %
Unclassified	root	N/A	28.30 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	71.70 %
Unclassified	root	N/A	28.30 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	42.45 %
Unclassified	root	N/A	28.30 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	4.72 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.30 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	13.21 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	4.72 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3.77 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2.83 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.30 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	4.72 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4.72 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	3.77 %
Nevskiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	1.89 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.94 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.94 %
Caulobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales	0.94 %
unclassified Planctomycetota	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.30 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4.72 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	1.89 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	0.94 %
Rhodanobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae	0.94 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.94 %
Steroidobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae	0.94 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.94 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	0.94 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.94 %
Caulobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	0.94 %
Sinobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.30 %
Occallatibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter	3.77 %
Variovorax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	1.89 %
Rhodospirillales bacterium TMPK1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium TMPK1	0.94 %
Methylovirgula	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylovirgula	0.94 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.94 %
Nevskia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia	0.94 %
Rhodanobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Rhodanobacter	0.94 %
Phenylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium	0.94 %
Rugamonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Rugamonas	0.94 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	0.94 %
Steroidobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter	0.94 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.30 %
Occallatibacter riparius	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter riparius	3.77 %
Variovorax paradoxus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → Variovorax paradoxus	1.89 %
Methylovirgula ligni	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylovirgula → Methylovirgula ligni	0.94 %
Rhodanobacter denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Rhodanobacter → Rhodanobacter denitrificans	0.94 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	0.94 %
Phenylobacterium deserti	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → Phenylobacterium deserti	0.94 %
unclassified Rugamonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Rugamonas → unclassified Rugamonas	0.94 %
Steroidobacter agaridevorans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter agaridevorans	0.94 %
Nevskia soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	0.94 %
Rhodospirillales bacterium TMPK1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium TMPK1	0.94 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	0.94 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.30 %
Occallatibacter riparius	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter riparius	3.77 %
Variovorax paradoxus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → Variovorax paradoxus	1.89 %
Rugamonas sp. CCM 8940	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Rugamonas → unclassified Rugamonas → Rugamonas sp. CCM 8940	0.94 %
Methylovirgula ligni	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylovirgula → Methylovirgula ligni	0.94 %
Rhodanobacter denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Rhodanobacter → Rhodanobacter denitrificans	0.94 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	0.94 %
Phenylobacterium deserti	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → Phenylobacterium deserti	0.94 %
Steroidobacter agaridevorans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter agaridevorans	0.94 %
Nevskia soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	0.94 %
Rhodospirillales bacterium TMPK1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium TMPK1	0.94 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	0.94 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.94 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004080\|Ga0062385_10155996	Not Available	1185	Open in IMG/M
3300004091\|Ga0062387_100189314	All Organisms → cellular organisms → Bacteria	1230	Open in IMG/M
3300004092\|Ga0062389_100171100	All Organisms → cellular organisms → Bacteria → Proteobacteria	2085	Open in IMG/M
3300005529\|Ga0070741_10051350	All Organisms → cellular organisms → Bacteria	4996	Open in IMG/M
3300005602\|Ga0070762_10816031	Not Available	632	Open in IMG/M
3300005712\|Ga0070764_10005199	All Organisms → cellular organisms → Bacteria → Proteobacteria	6165	Open in IMG/M
3300006893\|Ga0073928_10717462	All Organisms → cellular organisms → Bacteria → Proteobacteria	696	Open in IMG/M
3300009500\|Ga0116229_10030605	All Organisms → cellular organisms → Bacteria	6054	Open in IMG/M
3300009500\|Ga0116229_10081804	All Organisms → cellular organisms → Bacteria → Proteobacteria	2979	Open in IMG/M
3300009500\|Ga0116229_10106415	All Organisms → cellular organisms → Bacteria	2519	Open in IMG/M
3300009500\|Ga0116229_10334400	All Organisms → cellular organisms → Bacteria → Proteobacteria	1273	Open in IMG/M
3300009500\|Ga0116229_10466467	All Organisms → cellular organisms → Bacteria	1048	Open in IMG/M
3300009500\|Ga0116229_10529546	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Rugamonas → unclassified Rugamonas → Rugamonas sp. CCM 8940	973	Open in IMG/M
3300009500\|Ga0116229_10531204	All Organisms → cellular organisms → Bacteria	972	Open in IMG/M
3300009500\|Ga0116229_10993939	Not Available	675	Open in IMG/M
3300009510\|Ga0116230_10033333	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4888	Open in IMG/M
3300009510\|Ga0116230_10054134	All Organisms → cellular organisms → Bacteria	3652	Open in IMG/M
3300009545\|Ga0105237_10426678	All Organisms → cellular organisms → Bacteria	1331	Open in IMG/M
3300009551\|Ga0105238_10119677	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → Variovorax paradoxus	2613	Open in IMG/M
3300009633\|Ga0116129_1001564	All Organisms → cellular organisms → Bacteria	12530	Open in IMG/M
3300009633\|Ga0116129_1003304	All Organisms → cellular organisms → Bacteria → Proteobacteria	7771	Open in IMG/M
3300009633\|Ga0116129_1078337	Not Available	974	Open in IMG/M
3300009701\|Ga0116228_10041265	All Organisms → cellular organisms → Bacteria	3771	Open in IMG/M
3300009709\|Ga0116227_10035856	All Organisms → cellular organisms → Bacteria	5042	Open in IMG/M
3300009709\|Ga0116227_10348645	All Organisms → cellular organisms → Bacteria	1131	Open in IMG/M
3300009787\|Ga0116226_10033216	All Organisms → cellular organisms → Bacteria → Proteobacteria	5110	Open in IMG/M
3300010371\|Ga0134125_11730368	Not Available	680	Open in IMG/M
3300010373\|Ga0134128_11306768	All Organisms → cellular organisms → Bacteria → Proteobacteria	799	Open in IMG/M
3300010376\|Ga0126381_103684191	Not Available	600	Open in IMG/M
3300011270\|Ga0137391_10815645	Not Available	768	Open in IMG/M
3300012924\|Ga0137413_11524300	Not Available	544	Open in IMG/M
3300012925\|Ga0137419_11590412	Not Available	555	Open in IMG/M
3300012982\|Ga0168317_1018361	All Organisms → cellular organisms → Bacteria → Proteobacteria	2088	Open in IMG/M
3300013105\|Ga0157369_12334326	Not Available	542	Open in IMG/M
3300014168\|Ga0181534_10134459	Not Available	1258	Open in IMG/M
3300014168\|Ga0181534_10304860	Not Available	860	Open in IMG/M
3300014501\|Ga0182024_10095274	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4361	Open in IMG/M
3300014501\|Ga0182024_11219712	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	879	Open in IMG/M
3300014838\|Ga0182030_10022940	All Organisms → cellular organisms → Bacteria → Proteobacteria	11581	Open in IMG/M
3300015241\|Ga0137418_10267792	Not Available	1441	Open in IMG/M
3300015242\|Ga0137412_10342746	All Organisms → cellular organisms → Bacteria	1165	Open in IMG/M
3300020580\|Ga0210403_10634235	All Organisms → cellular organisms → Bacteria	861	Open in IMG/M
3300021086\|Ga0179596_10033669	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1999	Open in IMG/M
3300021168\|Ga0210406_10894107	Not Available	669	Open in IMG/M
3300021181\|Ga0210388_10026473	All Organisms → cellular organisms → Bacteria → Proteobacteria	4738	Open in IMG/M
3300021401\|Ga0210393_11094145	Not Available	644	Open in IMG/M
3300021403\|Ga0210397_11252024	Not Available	577	Open in IMG/M
3300021405\|Ga0210387_10131167	All Organisms → cellular organisms → Bacteria	2128	Open in IMG/M
3300021405\|Ga0210387_11082801	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter riparius	699	Open in IMG/M
3300021406\|Ga0210386_10340798	Not Available	1289	Open in IMG/M
3300021406\|Ga0210386_11492385	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter riparius	564	Open in IMG/M
3300021420\|Ga0210394_11328158	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	614	Open in IMG/M
3300021475\|Ga0210392_10780250	Not Available	713	Open in IMG/M
3300021477\|Ga0210398_11176767	Not Available	607	Open in IMG/M
3300021478\|Ga0210402_11826811	Not Available	534	Open in IMG/M
3300024288\|Ga0179589_10144025	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter agaridevorans	1012	Open in IMG/M
3300025463\|Ga0208193_1002203	All Organisms → cellular organisms → Bacteria	7998	Open in IMG/M
3300025463\|Ga0208193_1003175	All Organisms → cellular organisms → Bacteria → Proteobacteria	6299	Open in IMG/M
3300025924\|Ga0207694_10181280	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → Variovorax paradoxus	1708	Open in IMG/M
3300026557\|Ga0179587_10893441	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	586	Open in IMG/M
3300027559\|Ga0209222_1005690	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2668	Open in IMG/M
3300027574\|Ga0208982_1003519	All Organisms → cellular organisms → Bacteria → Proteobacteria	3203	Open in IMG/M
3300027807\|Ga0209208_10082868	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2326	Open in IMG/M
3300027807\|Ga0209208_10267272	Not Available	895	Open in IMG/M
3300027860\|Ga0209611_10047728	All Organisms → cellular organisms → Bacteria	3512	Open in IMG/M
3300027860\|Ga0209611_10235304	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium TMPK1	1101	Open in IMG/M
3300027860\|Ga0209611_10270752	Not Available	1008	Open in IMG/M
3300027879\|Ga0209169_10007523	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6206	Open in IMG/M
3300027895\|Ga0209624_10071122	All Organisms → cellular organisms → Bacteria	2245	Open in IMG/M
3300027908\|Ga0209006_11304306	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300028775\|Ga0302231_10126478	All Organisms → cellular organisms → Bacteria → Proteobacteria	1067	Open in IMG/M
3300029882\|Ga0311368_10020849	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6371	Open in IMG/M
3300029907\|Ga0311329_10371548	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Rhodanobacter → Rhodanobacter denitrificans	1010	Open in IMG/M
3300029910\|Ga0311369_10798531	Not Available	764	Open in IMG/M
3300029939\|Ga0311328_10181572	All Organisms → cellular organisms → Bacteria	1648	Open in IMG/M
3300029951\|Ga0311371_10182681	All Organisms → cellular organisms → Bacteria → Proteobacteria	3146	Open in IMG/M
3300029951\|Ga0311371_11021895	All Organisms → cellular organisms → Bacteria	980	Open in IMG/M
3300029951\|Ga0311371_11045760	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	965	Open in IMG/M
3300029954\|Ga0311331_10139185	All Organisms → cellular organisms → Bacteria → Proteobacteria	2945	Open in IMG/M
3300029999\|Ga0311339_10036475	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	6887	Open in IMG/M
3300029999\|Ga0311339_11523656	All Organisms → cellular organisms → Bacteria → Proteobacteria	594	Open in IMG/M
3300030007\|Ga0311338_11160080	Not Available	736	Open in IMG/M
3300030618\|Ga0311354_10189830	All Organisms → cellular organisms → Bacteria → Proteobacteria	2206	Open in IMG/M
3300030618\|Ga0311354_10397828	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1391	Open in IMG/M
3300030677\|Ga0302317_10160010	All Organisms → cellular organisms → Bacteria	1048	Open in IMG/M
3300030693\|Ga0302313_10277953	All Organisms → cellular organisms → Bacteria → Proteobacteria	669	Open in IMG/M
3300030906\|Ga0302314_10246110	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → Phenylobacterium deserti	2130	Open in IMG/M
3300031027\|Ga0302308_10258456	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	1090	Open in IMG/M
3300031057\|Ga0170834_104115791	All Organisms → cellular organisms → Bacteria → Proteobacteria	631	Open in IMG/M
3300031128\|Ga0170823_13516693	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter riparius	883	Open in IMG/M
3300031231\|Ga0170824_100338467	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter riparius	1229	Open in IMG/M
3300031231\|Ga0170824_117093771	Not Available	771	Open in IMG/M
3300031234\|Ga0302325_13370437	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300031236\|Ga0302324_103063911	Not Available	554	Open in IMG/M
3300031247\|Ga0265340_10249073	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	792	Open in IMG/M
3300031446\|Ga0170820_10622020	All Organisms → cellular organisms → Bacteria	1065	Open in IMG/M
3300031525\|Ga0302326_12250380	Not Available	694	Open in IMG/M
3300031525\|Ga0302326_13444715	All Organisms → cellular organisms → Bacteria → Proteobacteria	527	Open in IMG/M
3300031708\|Ga0310686_100348274	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylovirgula → Methylovirgula ligni	904	Open in IMG/M
3300031708\|Ga0310686_104842146	All Organisms → cellular organisms → Bacteria	3334	Open in IMG/M
3300031708\|Ga0310686_108781105	All Organisms → cellular organisms → Bacteria → Proteobacteria	1743	Open in IMG/M
3300031708\|Ga0310686_117211576	All Organisms → cellular organisms → Bacteria → Proteobacteria	6121	Open in IMG/M
3300031754\|Ga0307475_11254154	Not Available	576	Open in IMG/M
3300031823\|Ga0307478_11666088	Not Available	526	Open in IMG/M
3300032180\|Ga0307471_103550626	Not Available	552	Open in IMG/M
3300032896\|Ga0335075_10011029	All Organisms → cellular organisms → Bacteria → Proteobacteria	13678	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	77.36%
Host-Associated	Host-Associated	22.64%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	66.98%
Plants	Host-Associated → Plants	22.64%
Aquatic	Environmental → Aquatic	10.38%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	45.28%
Peat	Environmental → Terrestrial → Peat	20.75%
Peat Moss	Host-Associated → Plants → Peat Moss	17.92%
Freshwater	Environmental → Aquatic → Freshwater	9.43%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.72%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.94%
Geologic	Environmental → Terrestrial → Geologic	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	34.91%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	20.75%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified	17.92%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	9.43%
Loam	Environmental → Terrestrial → Soil → Loam	6.60%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.77%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.77%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.94%
Mine	Environmental → Terrestrial → Geologic → Mine	0.94%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	20.75%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	19.81%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified	17.92%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.09%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.60%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	4.72%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	4.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.77%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.83%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.94%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.94%
Unclassified	Environmental → Terrestrial → Geologic → Mine → Unclassified	0.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.94%

Habitat	Taxonomy	Distribution
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	17.92%
Host-Associated	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated	17.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.26%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.55%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	4.72%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	4.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.77%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.77%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.83%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.83%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.83%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	2.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.83%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.89%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.89%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	1.89%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.94%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.94%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.94%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.94%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.94%
Weathered Mine Tailings	Environmental → Terrestrial → Geologic → Mine → Unclassified → Weathered Mine Tailings	0.94%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.94%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.94%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009500	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum magellanicum MG	Host-Associated	Open in IMG/M
3300009510	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fd - Sphagnum fallax MG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009633	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_10	Environmental	Open in IMG/M
3300009701	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum fallax MG	Host-Associated	Open in IMG/M
3300009709	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fb - Sphagnum magellanicum MG	Host-Associated	Open in IMG/M
3300009787	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fa - Sphagnum fallax MG	Host-Associated	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012982	Weathered mine tailings microbial communities from Hibbing, Minnesota, USA - DCWfield	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300014168	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300025463	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_10 (SPAdes)	Environmental	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027559	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O3 (SPAdes)	Environmental	Open in IMG/M
3300027574	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_O3 (SPAdes)	Environmental	Open in IMG/M
3300027807	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fd - Sphagnum fallax MG (SPAdes)	Host-Associated	Open in IMG/M
3300027860	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum magellanicum MG (SPAdes)	Host-Associated	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028775	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_2	Environmental	Open in IMG/M
3300029882	III_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029907	I_Bog_N1 coassembly	Environmental	Open in IMG/M
3300029910	III_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300029939	I_Bog_E3 coassembly	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300029954	I_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030677	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N3_3	Environmental	Open in IMG/M
3300030693	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N2_2	Environmental	Open in IMG/M
3300030906	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N2_3	Environmental	Open in IMG/M
3300031027	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_3	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031247	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG	Host-Associated	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062385_101559961	3300004080	Bog Forest Soil	MTPAQFVQAPLQGKLSVSRVFWLYGVVGSLVYGLLEFFIDPANAFLIRLYTVGAYAYSAYVIVGTYRCAVNCRTAGMARFVRISAIASLILLPVFMYFELSGALDGELSQFQQLNF*
Ga0062387_1001893141	3300004091	Bog Forest Soil	MTPAQFVQAPLQGKLSVSRVFWLYGVVGSLVYGLLEFFIDPANAFLIRLYTVGAYAYSAYVIVGTYRCAVNCRTAGMARFVRICAIASLILLPVFMYFELSGALDGELSQFQQLNF*
Ga0062389_1001711002	3300004092	Bog Forest Soil	MTPTQFMQDPLQGKLSVSRVFWLYGVVGSLVYGCLEFFIDPGNTFLIRLYTIGGCLYSAYVIVGTYRCSVNCRTSGMARFVRVSCIISLLLLPILTYFELSGAIGSDLSQLDQLNF*
Ga0070741_100513502	3300005529	Surface Soil	MTPAQFVQAPLQGKLSVSRVFWLYGVVGSLVYELLEFFIDPANAFLVRLYTVGAYAYSAYVIVGTYRCAVNCRTAGMARFVRISAIASLILLLVFMYFELSGALDGELSRLQQLNL*
Ga0070762_108160312	3300005602	Soil	VTPTQFIQAPLQAKLSVSRVFWLYGVVGSLVYGALEFLIDPGNTFLMRLYTIGGCVYSAYVIVGTYRCAVNCRTAGMARFVRVSCVISLILLPVLTYFEFSGALSGDLSQIEQLNF*
Ga0070764_100051995	3300005712	Soil	MTPARFFQAPLEGKLSVSRVFWLYGVVGSLVYGILEFFIDPANAFLIRLYTVGAYAYSAYVIVGTYRCAVNCRTAGMARFVRISAIASLILLPVFMYFEFSGAFDGELSQFQQLNF*
Ga0073928_107174622	3300006893	Iron-Sulfur Acid Spring	VTPIQFIQAPLQAKLSVARVFWLYGVAGSLIYGCLEFFIDPGNTFLMRLYTIGGCLYSAYVIIGTYQCAVNCRTVRMARFVRVSSILSLILLPILTYYELSGAFSSELSQLEQLNL*
Ga0116229_100306053	3300009500	Host-Associated	MDMNIPAFIRAPLEGKTTVSRVFWLYGVVGSLIYSALEFVIDPGNVGLLRVYTLGGALFSLYVIVGTYRCAVNCRTEAMARFVRVSCVLSVLLLPVLTYFELTGALRTDLSQLDQLNL*
Ga0116229_100818043	3300009500	Host-Associated	MTTILQFFRAPLEGKLSVSRVFVLYGIVGSLLYGCLEFLIDPLNSFLMRTYTIGGVLYSAYVIVGTHRCAVNCKTARRARWVRVCCVISLLLLPVLTYVEWNGTFDSELSQLDQLNF*
Ga0116229_101064154	3300009500	Host-Associated	MSIKSFIEAPLQAKTSVSRVFWLYGIVGSLLYSGLEFLIDPGNAWLLRAYTLGGALLSLYVIVGTYRCAVNCRSAGMARFVRVSCVISVLLLPVITYLELSGALSTDLSQLQQLGL*
Ga0116229_103344001	3300009500	Host-Associated	MTPTEFLRAPLQAKLSVSRVFWLYGVAGSLVYGCLEFFIDPGSTSLMRLYTIGGGLYSAYVIIGTYRCAVNCATVAMARFVRISCILSLLLLPILTYYELSGAFGSELSQLDQLKF*
Ga0116229_104664672	3300009500	Host-Associated	MSIRSFIEAPLQGKTSVSRVFWLYGVVASLVYSSLEFLIDPGNAALLRAYTLGGALLTLYVIVGTYRCAVNCRSPGMARFVRVSCVISLLLLPVITYLELSGALSTDLSQLQELGL*
Ga0116229_105295462	3300009500	Host-Associated	MSIKSFIEAPLQGKTSVSRVFWLYGVLLSLLYSSLEFLIDPGNAVLLRVYTLGGALLTLYVIVGTYRCAVNCRSPGMARFVRVSCVISLLLLPVITYLELSGALSTDLSQLKELGL*
Ga0116229_105312042	3300009500	Host-Associated	MSIRAFIEAPLQGKTSVSRVFWLYGVVGSLMYSALEFLIDPGNAGLLRAYTLGDALFSLYVIVGTYRCAVNCRTAGMARFVRVSCVISVLLLPVITYLELSGALSADLSQLEQLNL*
Ga0116229_109939391	3300009500	Host-Associated	MASIAQFFRAPLEGKLSVSRVVWVYGIVGSLLYGCLEFFIDPLNSILMRIYTLGGILYSAYVIVGTYRCAVNCKTPRMARLVRLSCVISLLLLPVLTYMEWNGAVDSELLQLQQLNF*
Ga0116230_100333335	3300009510	Host-Associated	MNVAAARSPFAAVMISPMTSIAQFFRAPLQGKLSVSRVFVVYGIVGSLLYGCLEFMIDPFNLFLMRVYTIGGILYSAYVIVGTYRCAVNCKTPRMARFVRVSCVISLLLLPVITYMEWNGAVDSELLQLEQLNF*
Ga0116230_100541345	3300009510	Host-Associated	MSIKSFIEAPLQAKTSVSRVFWLYGIVGSLLYSGLEFLIDPGSAWLLRAYTLGGALLSLYVIVGTYRCAVNCRSAGMARFVRVSCVISVLLLPVITYLELSGALSTDLSQLQQLGL*
Ga0105237_104266782	3300009545	Corn Rhizosphere	MTTAQFVKAPLQGKLSVSRVFWLYGVVGSLVYGLVEFFIDPANALLIRLYTVGAYAYSAYVIVGTYRCAVNCKTAGMARFVRISAIVSLILLPVFMYFELSGVFDGELSQFQQLNF*
Ga0105238_101196771	3300009551	Corn Rhizosphere	QFVQAPLKGELAVSRVFWLYGVVGSLVYGFLEFFIDPANVFLIRLYTVGAYAYSAYVIVGTYRCAVNCRTAGMARFVRISAIVSLILLPVFMYFELSGALDGELSQFQQLNF*
Ga0116129_100156410	3300009633	Peatland	VTPTQFIQAPLQAKLSVARVFWLYGVAGSLVYGGLEFFIDPGNTFLMRIYSIGGFLYSAYVIVGTYRCSVNCSTEAMARFVRISSIISLILLPILTYFELSGAFSSDLSQLEQLNL*
Ga0116129_10033046	3300009633	Peatland	VTPTQFIQAPLQAKLSVSRVFWLYGVVGSLVYGALEFLIDPGNTFLMRLCTIGGCVYSAYVIVGTYRCAVNCRTAGMARFVRVSCIISLILLPVLTYFEFSGALSGDLSQLEQLNF*
Ga0116129_10783372	3300009633	Peatland	MSIRTFIEAPLQGKTSVSRVFWLYGIVGSLLYSCLEFLIDPGNGGLLRVYTLGGALLTLYVIVGTYRCAVNCRSPGMARFVRVSSVISLLLLPVITYLELSGALSTDLSQLQELNF*
Ga0116228_100412654	3300009701	Host-Associated	MITPMTSIAQFFRAPLQGKLSVSRVFVVYGIVGSLLYGCLEFMINPFNLFLMRVYTIGGILYSAYVIVGTYRCAVNCKTPRMARFVRVSCVISLLLLPVITYMEWNGAVDSELLQLEQLNF*
Ga0116227_100358562	3300009709	Host-Associated	MDMNIPAFIRAPLEGKTTVSRVFWLYGVVGSLIYSALEFVIDPGNVGLLRAYTLGGALFSLYVIVGTYRCAVNCRTEAMARFVRVSCVLSVLLLPVLTYFELTGALRTDLSQLDQLNL*
Ga0116227_103486451	3300009709	Host-Associated	MTTLSEFFRAPLEGKLSVSRVFVVYGVVGSLVYGCLEFTLDPSNSFLMRAYTLGGALYSAYVIVATYRCAVNCKTPRMAQFVRVSCIISLVILPVVTYMELSGVFESELSQLDQLNF*
Ga0116226_100332163	3300009787	Host-Associated	LSIRDFIQAPLQGKTSVSRVFWLYGVVGSLLYSCLELLIDPGKAGLLRAYTLGGALFTLYVIVGTYRCAVNCRSPGMARFVRVSCVISVLLLPLITYLELSGALTADLSQIEELGL*
Ga0134125_117303682	3300010371	Terrestrial Soil	VQAPLQGKLTVSRVFWLYGVVGSLVYGLLEFFIDPGNVFLIRLYTVGAYAYSAYVIIGTYRCAVNCRTAGMARFVRISALISLILLPVFMYFELSGALDGELSQFQQLNF*
Ga0134128_113067682	3300010373	Terrestrial Soil	MTLAQFVKAPLEGRLSVSRVFWLYGVVGSLVYGLLEFFIDPGNALLIRLYTVGAYAYSAYVIVGTYRCAVNCRTAGMARFVRISAIVSLILLPVFMYFELSGALDGELSQFQQLNY*
Ga0126381_1036841912	3300010376	Tropical Forest Soil	VSRVFWLYGVVGSLAYGLLEFFIDPANAFLIRLYTVGAYAYSAYVIVGTYRCAVNCRTALMARFVRISAIVSLILLPIFMYFELSGALDGELSQFQQLNF*
Ga0137391_108156451	3300011270	Vadose Zone Soil	MTPAQFVQAPLQGKLSVSRVFWLYGVVGSLAYGLLEFFIDPANAFLIRLYSVGAYAYSAYVIVGTYRCAVNCRTAGMARFVRISAIASLILLPVFMYFELSGALDGELSQFQQLNF*
Ga0137413_115243001	3300012924	Vadose Zone Soil	MTPDQFVQAPLQGKLSVSRVFWVYGVVGSLAYGLLEFFIDPANAFLIRLYSVGAYAYSAYVIVGTYRCAVNCRTAGMARFVRISAIASLILLPVFMYFELSGALDGELSQFQQLNF*
Ga0137419_115904121	3300012925	Vadose Zone Soil	MTPAQFVQAPLQGELSVSRVFWLYGVVGSLVYGLLEFFIDPANAFLIRLYTVGAYAYSAYVIVGTYRCAVNCRTAGMARFVRISAIASLILLPVFMYFELSGALDGELSQFQQLNF*
Ga0168317_10183613	3300012982	Weathered Mine Tailings	MTPAQFVQAPLQGKLSVSRVFWLYGVLGSLVYGLLEFFIDPGNAFLIRLYTVGAYAYSAYVIVGTYRCAVHCRTAGMARFVRISAIASLILLPVFMYFEFSGALGSELSQLQQLNF*
Ga0157369_123343262	3300013105	Corn Rhizosphere	MTAAQFIQAPLKGELTVSRVFWLYGVVGSLVYGLLEFFIDPANVFLIRLYTVGAYAYSAYVIVGTYRCAVNCRTAGMARFVRISAIVSLILLPVFMYFELSGALDGELSQFQQLNF*
Ga0181534_101344591	3300014168	Bog	RVFWLYGVAGSLVYGCLEFFIDPGNTFLMRLYTIGGGLYSAYVIIGTYRCAVNCATVAMARFVRISCILSLILLPMLTYYELSGALSGELSQLEQLNL*
Ga0181534_103048602	3300014168	Bog	RVFWLYGVAGSLVYGCLEFFIDPGNTVLMRLYTIGGGLYSAYVIIGTYRCAVNCATVGMARFVRISCVLSLLLLPILTYYELSGALGSDMSQIEQLNL*
Ga0182024_100952743	3300014501	Permafrost	MGIRAFIEAPLQGKTSVSRVFWLYGLVGSLLYSCLEFLIDPGNARLLRAYTLGGALLTLYVIVGTYRCAVNCRSPGMARFVRVSCVVSLLLLPVITYLDLSGALSTDLSQLQELNF*
Ga0182024_112197121	3300014501	Permafrost	MTPIQFLQEPLQAKLSVSRVFWLYGVAGSLVYGCLEFFIDPGNTVLMRLYTVGDGLYSAYVIVGTYRCAVNCATVGMARFVRISCVLSLLLLPVLTYVELSGALSSDLSQLDQLNL*
Ga0182030_100229406	3300014838	Bog	MSIRAFIEAPLQGKTSVARVFWLYGIVGSLLYSCLEFLIDPGSAGLLRTYTLGGALLTLYVIVATYRCAVNCRSPGMARFVRVSSVISLLLLPVITYLELSGALSTDLSQLEQLNL*
Ga0137418_102677922	3300015241	Vadose Zone Soil	MTPDQFVQAPLQGKLSVSRVFWLYGVVGSLVYGLLEFFIDPANAFLIRLYTVGAYAYSAYVIVGTYRCAVNCRTAGMARFVRISAIASLILLPVFMYFELSGALDGELSQFQQLNF*
Ga0137412_103427461	3300015242	Vadose Zone Soil	MTPAQFVQAPLQGKLSVSRVFWVYGVVGSLAYGLLEFFIDPANAFLIRLYSVGAYAYSAYVIVGTYRCAVNCRTAGMARFVRISAIASLILLPVFMYFELSGALDGELSQFQQLNF*
Ga0210403_106342352	3300020580	Soil	MTPAQFVQAPLQGKLSVSRVFWLYGVVGSLVYGLLEFFIDPANAFLIRLYTVGAYAYSVYVIVGTYRCAVNCKTAGMARFVRISAIASLILLPVFMYFELSGALDGELSQFQQLNF
Ga0179596_100336694	3300021086	Vadose Zone Soil	MTPAQFVQAPLQGKLSVSRVFWLYGVVGSLVYGLLEFFIDPANAFLIRLYTVGAYAYSAYVIVGTYRCAVNCRTAGMARFVRISAIASLILLPVFIYFELSGALDGELSQFQQLNF
Ga0210406_108941071	3300021168	Soil	MTPAQFVQAPLQGRLSVSRVFWLYGVVGSLVYGLLEFFIDPANAFLIRLYTVGAYAYSAYVIVGTYRCAVNCRTAGMARFVRISAIVSLILLPIFMYFELSGALDGELSQFQQLNF
Ga0210388_100264732	3300021181	Soil	MTPAQFVQAPLQGKLSVSRVFWLYGVVGSLVYGLLEFFIDPVNAFLIRLYTVGAYAYSAYVIVGTYRCAVNCRTAGMARFVRISAVASLILLPVFMYFELSGALDGELSQFQQLNF
Ga0210393_110941451	3300021401	Soil	MTPAQFVQAPLQGKLSVSRVFWLYGVVGSLVYGLLEFFIDPANGFLIRLYTVGAYAYSAYVIVGTYRCAVNCRTAGMARFVRISAVVSLILLPIFMYFELSGALDGELSQFQQLNF
Ga0210397_112520241	3300021403	Soil	MTPAQFVQAPLQGKLSVSRVFWLYGVVGSLVYGLLEFFIDPANAFLIRLYTVGAYAYSAYVIVGTYRCAVNCRTAGMARFVRISAIASLILLPVFMYFELSGALDGELSQFQQLNF
Ga0210387_101311672	3300021405	Soil	MTPAQFVQAPLKGKLSVSRVFWLYGVVGSLVYGLLEFFIDPANAFLIRLYTVGAYAYSAYVIVGTYRCAVNCRTAGMARFVRISAIASLILLPVFMYFELSGALDGELSQFQHLNF
Ga0210387_110828011	3300021405	Soil	MTPTQFVQAPLQGKLSVSRVFWLYGVVGSLVYGLLEFFIDPANAFLIRLYTVGAYAYSAYVIFGTYRCAVNCRTAGMARFVRISAIVSLILLPVFMYYELSGAFDGELSQFQQLNF
Ga0210386_103407982	3300021406	Soil	MTPAQFVQAPLQGKLSVSRVFWLYGVVGSLVYGLLEFFIDPANAFLIRLYTVGAYAYSAYVIVGTYRCAVNCRTAGMALFVRISAIASLILLPVFMYFELSGALDGELSQFQQLNF
Ga0210386_114923851	3300021406	Soil	SGMTPAQFLQAPLEGKLTVSRVFWLYGVVGSLVYGLLEFFIDPANAFLIRLYTVGAYAYSAYVIVGTYRCAVNCRTAGMARFVRLSAIASLILLPIFMYLELSGALDGELSQFQQLNF
Ga0210394_113281582	3300021420	Soil	MTPAQFVQAPLQGKLSVSRVFWLYGVVGSLVYGLLEFFIDPANAFLVRLYTVGAYAYSAYVIVGTYRCAVNCRTAGMARFVRISAIASLILLPVFMYFELSGALDGELSQFQQLNF
Ga0210392_107802501	3300021475	Soil	MGIREFFEAPLQGKMSVSRVFWLYGIVGSLVYGLFEFLIDPGNVFLMRLYSIGGLLYTAYVIVATHRSAVNCKSQRMASFVRISCVASLLILPLIAYLELTGSLSLDIGGLDQLDLTGR
Ga0210398_111767672	3300021477	Soil	MTPTQFVQAPLEGKLSVSRVFWLYGVVGSLVYGLLEFFIDPANAFLIRLYTVGAYAYSAYVIVGTYRCAVNCRTAGMARFVRISAIASLILLPVFMYFEFSGAFDGELSQFQQLNF
Ga0210402_118268111	3300021478	Soil	MTPTQFVQAPLQGKLSVSRVFWLYGVVGSLVYGLLEFFIDPANAFLIRLYTVGAYAYSVYVIVGTYRCAVNCRTAGMARFVRISAIASLILLPVFMYFELSGALDGELSQFQQLNF
Ga0179589_101440252	3300024288	Vadose Zone Soil	MTPAQFVQAPLQGKLSVSRVFWLYGVVGSLAYGLLQFFIDPANAFLIRLYSVGAYAYSAYVIVGTYRCAVNCRTAGMARFVRISAIASLILLPVFMYFEFSGALDGELSQLQQLNF
Ga0208193_10022037	3300025463	Peatland	MGTTYVSVAPKVSKIGGVTPTQFIQAPLQAKLSVARVFWLYGVAGSLVYGGLEFFIDPGNTFLMRIYSIGGFLYSAYVIVGTYRCSVNCSTEAMARFVRISSIISLILLPILTYFELSGAFSSDLSQLEQLNL
Ga0208193_10031753	3300025463	Peatland	VTPTQFIQAPLQAKLSVSRVFWLYGVVGSLVYGALEFLIDPGNTFLMRLYTIGGCVYSAYVIVGTYRCAVNCRTAGMARFVRVSCIISLILLPVLTYFEFSGALSGDLSQLEQLNF
Ga0207694_101812801	3300025924	Corn Rhizosphere	QFVQAPLKGELAVSRVFWLYGVVGSLVYGFLEFFIDPANVFLIRLYTVGAYAYSAYVIVGTYRCAVNCRTAGMARFVRISAIVSLILLPVFMYCELSGALDGELSQFQQLNF
Ga0179587_108934412	3300026557	Vadose Zone Soil	DSGMTPAQFVQAPLQGKLSVSRVFWLYGVVGSLAYGLLEFFIDPANAFLIRLYTVGAYAYSAYVIVGTYRCAVNCRTAGMARFVRISAIASLVLLPVFMYFELSGALDGELSQLQQLNF
Ga0209222_10056903	3300027559	Forest Soil	VTPTQFIQAPLQAKLSVSRVFWLYGVVGSLVYGALEFLIDPGNTFLMRLYTIGGCVYSAYVIVGTYRCAVNCRTAGMARFVRVSCVISLILLPVLTYFEFSGALSGDLSQLEQLNF
Ga0208982_10035194	3300027574	Forest Soil	MGIRQFFEAPLQGKVTVSRVFWLYGVVGSLVYGLFEFLIDPGNVFLTRLYSIGGLLYTAYVIVATHRSAVNCKSQRMASFVRISCVASLLLLPVFAYLELSGALSLDMAGLEQLDVTGR
Ga0209208_100828683	3300027807	Host-Associated	VSRVFVVYGIVGSLLYGCLEFMIDPFNLFLMRVYTIGGILYSAYVIVGTYRCAVNCKTPRMARFVRVSCVISLLLLPVITYMEWNGAVDSELLQLEQLNF
Ga0209208_102672723	3300027807	Host-Associated	MSIKSFIEAPLQAKTSVSRVFWLYGIVGSLLYSGLEFLIDPGSAWLLRAYTLGGALLSLYVIVGTYRCAVNCRSAGMARFVRVSCVISVLLLPVITYLELSGALSTDLSQLQQLGL
Ga0209611_100477285	3300027860	Host-Associated	MTTILQFFRAPLEGKLSVSRVFVLYGIVGSLLYGCLEFLIDPLNSFLMRTYTIGGVLYSAYVIVGTHRCAVNCKTARRARWVRVCCVISLLLLPVLTYVEWNGTFDSELSQLDQLNF
Ga0209611_102353041	3300027860	Host-Associated	MTPTEFLRAPLQAKLSVSRVFWLYGVAGSLVYGCLEFFIDPGSTSLMRLYTIGGGLYSAYVIIGTYRCAVNCATVAMARFVRISCILSLLLLPILTYYELSGAFGSELSQLDQLKF
Ga0209611_102707522	3300027860	Host-Associated	RMDMNIPAFIRAPLEGKTTVSRVFWLYGVVGSLIYSALEFVIDPGNVGLLRVYTLGGALFSLYVIVGTYRCAVNCRTEAMARFVRVSCVLSVLLLPVLTYFELTGALRTDLSQLDQLNL
Ga0209169_100075233	3300027879	Soil	MTPARFFQAPLEGKLSVSRVFWLYGVVGSLVYGILEFFIDPANAFLIRLYTVGAYAYSAYVIVGTYRCAVNCRTAGMARFVRISAIASLILLPVFMYFEFSGAFDGELSQFQQLNF
Ga0209624_100711223	3300027895	Forest Soil	MTPAQFVQAPLKGNLSVSRVFWLYGVVGSLVYGLLELFIDPANAFLIRLYSVGAYAYATYVIVGTYRCAVNCRTAGVARFVRISAIVSLILLPVFMYFDISGALDGELSQFQQLNF
Ga0209006_113043062	3300027908	Forest Soil	VTPTEFINAPLQGKVSVSRVFWLYGVVGSLVYGLLEFFINPGNTLLVRLYSIGGYVYSVYVILGTYRCAVNCKTAGMARFVRISAIASLILLPVFMYFEFSGAFDGELSQFQQLNF
Ga0302231_101264782	3300028775	Palsa	VTPTQFIQAPLQAKLSVSRVFWLYGVVGSLMYGALEFLIDPGNTFLMRLYTIGGCVYSAYVIVGTYRCAVNCRTAGMARFVRVSCVISLILLPVLTYFEFSGALSGDLSQLEQLNF
Ga0311368_100208494	3300029882	Palsa	MTPIQFLQEPLQAKLSVSRVFWLYGVAGSLVYGCLEFFIDPGNTVLMRLYTVGDGLYSAYVIVGTYRCAVNCATVGMARFVRISCVLSLLLLPVLTYVELSGALSSDLSQLDQLNL
Ga0311329_103715481	3300029907	Bog	MSIKSFIEAPLQGKTSVSRVFWLYGVVLSLLYSSLEFLIDPGNTVLLRLYTLGGALLTVYVIVGTYRCAVNCRSPGMARFVRVSCVISLLLLPLITYLELSGALNTDLSQLKELG
Ga0311369_107985311	3300029910	Palsa	VTPTQFIQAPLQAKLSVSRVFWLYGVVGSLVYGLLEFFIDPANAFLIRLYTVGAYAYSAYVIVGTYRCAVNCRTAGMARFVRISAIASLILLPVFMYFELSGAFDGELSQFQQLNF
Ga0311328_101815723	3300029939	Bog	MTHIQFLQAPLQAKISVARVFWLYGVAGSLVYGCLEFFIDPGNTFLMRLYTIGGGLYSTYVIVGTYRCAVNCATVGMARFVRISCVLSLLLLPILTYLELSGALSSDLSQLDQLDL
Ga0311371_101826813	3300029951	Palsa	MTVAQFVQAPLEGKLSVSRVFWLYGVVGSLVYGLLEFFIDPANAFLIRLYTVGAYAYSAYVIVGTYRCAVNCRTAGMARFVRISAIASLILLPVFMYFELSGAFDGELSQFQQLNF
Ga0311371_110218952	3300029951	Palsa	MTPLQFLQAPLQAKLSVARVFWLYGVAGSLVYGCLEFFIDPGNTFLMRLYTIGGGLYSAYVIIATYRCAVNCATVAMARFVRISCILSLILLPVLTYYELSGAFSSELSQLEQLNL
Ga0311371_110457602	3300029951	Palsa	MGIKAFIEAPLQGKISVSRVFWLYGVVGSLLYSCLEFLIDPGNSVLLRIYTLGGALLTVYVIVGTYRCAVNCRSPSMARFVRVSCVISMLLLPVITYLELSGALSTDLSQLQELNP
Ga0311331_101391854	3300029954	Bog	MSIKSFIEAPLQGKTSVSRVFWLYGVVLSLLYSSLEFLIDPGNTVLLRLYTLGGALLTVYVIVGTYRCAVNCRSPGMARFVRVSCVISLLLLPLITYLELSGALNTDLSQLKELGL
Ga0311339_100364756	3300029999	Palsa	IQAPLQAKLSVSRVFWLYGVVGSLVYGALEFLIDPGNTFLMRLYTIGGCVYSAYVIVGTYRCAVNCRTAGMARFVRVSCVISLILLPVLTYFEFSGALSGDLSQLEQLNF
Ga0311339_115236561	3300029999	Palsa	ESTARQAHEHNRPMGIKAFIEAPLQGKISVSRVFWLYGVVGSLLYSCLEFLIDPGNSVLLRIYTLGGALLTVYVIVGTYRCAVNCRSPSMARFVRVSCVISMLLLPVITYLELSGALSTDLSQLQELNP
Ga0311338_111600801	3300030007	Palsa	MGIKAFIEAPLQGKISVSRVFWLYGVVGSLLYSCLEFLIDPGNSVLLRIYTLGGALLTVYVIVGTYRCAVNCRSPSMARFVRVSCVISMLLLPVI
Ga0311354_101898303	3300030618	Palsa	VSRVFWLYGVVGSLMYGALEFLIDPGNTFLMRLYTIGGCVYSAYVIVGTYRCAVNCRTAGMARFVRVSCVISLILLPVLTYFEFSGALSGDLSQLEQLNF
Ga0311354_103978281	3300030618	Palsa	MGIKAFIEAPLQGKISVSRVFWLYGVVGSLLYSCLEFLIDPGNTKLLRVYTLGGALLTVYVVVGTYRCAVNCRSPSMARFVRVSCVISLLLLPVITYLELSGALSTDLSQLEQLNL
Ga0302317_101600101	3300030677	Palsa	SRVFWLYGVAGSLVYGCLEFFIDPGNTVLMRLYTVGDGLYSAYVIVGTYRCAVNCATVGMARFVRISCVLSLLLLPVLTYVELSGALSSDLSQLDQLNL
Ga0302313_102779532	3300030693	Palsa	VTPTQFIQAPLQAKLSVSRVFWLYGVVGSLMYGALEFLIDPGNTFLMRLYTIGGCVYSAYVIVGTYRCAVNCRTAGMARFVRVSCVISLILLPVLTY
Ga0302314_102461101	3300030906	Palsa	VTPTQFIQAPLQAKLSVSRVFWLYGVVGSLMYGALEFLIDPGNTFLMRLYTIGGCVYSAYVIVGTYRCAVNCRTAGMARFVRVSCVLSLILLPVLTYFEFSG
Ga0302308_102584561	3300031027	Palsa	GGVTPTQFIQAPLQAKLSVSRVFWLYGVVGSLVYGALEFLIDPGNTFLMRLYTIGGCVYSAYVIVGTYRCAVNCRTAGMARFVRVSCVISLILLPVLTYFEFSGALSGDLSQLEQLNF
Ga0170834_1041157912	3300031057	Forest Soil	MTPAQFVQAPLEGKLSVSRVFWLYGVVGSLVYGLIEFFIDPANALLIRLYTVGAYAYSAYVIVGTYRCAVNCRTASMARFVRISAIVSLILLPVFMYFELSGALDGELSQFQQLNF
Ga0170823_135166932	3300031128	Forest Soil	MTPAQVVQAPLKGKLSVSRVFWLYGVVGSLVYGLIEFFIDPANALLIRLYTVGAYAYSAYVIVGTYRCAVNCRTAGMARFVRISAIASLILLPVFLYLELSGAFDGELSQFQQLNF
Ga0170824_1003384672	3300031231	Forest Soil	MTLAQFVQAPLEGRLSVSRVFWLYGVVGSLAYGLLEFFIDPANAFLIRLYTIGAYAYSAYVIVGTYRCAVNCRTASMARFVRISAIVSLILLPVFLYLELSGAFDGELSQFQQLNF
Ga0170824_1170937711	3300031231	Forest Soil	MTPGQFVQAPLQGKLSVSRVFWLYGVVGSLVYGLLEFFIDPANAFLIRLYTVGAYAYSAYVIVGTYRCAVNCRTAVMARFVRISAIASLILLPLFMYFEFSGALDGELSQFQQLNF
Ga0302325_133704372	3300031234	Palsa	IQFLQAPLQAKLSVARVFWLYGVAGSLAYGCLEFFIDPGNTILMRLYTIGGGLYSAYVIVGTYRCSVNCATARMALLVRVSCVLSLILLPILTYVELSGALGSDLSQIEQLNL
Ga0302324_1030639111	3300031236	Palsa	LQAKLSVSRVFWLYGVLGSLVYGALEFFINPGNAFLMRVYTIGDGLYSAYVIVGTYRCSVNCSSAGMARFVRVSCIISLILLPILTYFELSGAFDSELSQLEQLNL
Ga0265340_102490731	3300031247	Rhizosphere	MTLAQFVQAPLKGKLSVSRVFWLYGVVGSLVYGLLEFFIDPANAFLIRLYTVGAYAYSAYVIVGTYRCAVNCRSVGMERFVRISAIVSLILLPVFMYFELSGALDGELSQFQQLNF
Ga0170820_106220202	3300031446	Forest Soil	MTLAQFVQAPLEGRLSVSRVFWLYGVVGSLAYGLLEFFIDPANAFLIRLYTIGAYAYSAYVIVGTYRCAVNCRTAGMARFVRISAIASLILLPVFLYLELSGAFDGELSQFQQLNF
Ga0302326_122503802	3300031525	Palsa	MSIRAFIEAPLQGKTSVSRVFWLYGVVGSLLYSCLEFLIDPGNTKLLRVYTLGGALLTVYVVVGTYRCAVNCRSPSMARFVRVSCVISLLLLPVITYLELSGALSTDLSQ
Ga0302326_134447152	3300031525	Palsa	VTFAQFIQAPLQAKLSVSRVFWLYGVLGSLVYGALEFFINPGNAFLMRVYTIGDGLYSAYVIVGTYRCSVNCSSAGMARFVRVSCIISLILLPILTYFELSGAFDSELSQLEQ
Ga0310686_1003482742	3300031708	Soil	MTPAQFIQAPLEGKLSVSRVFWLYGVVGSLVYGLLEFFIDPANALLIRLYTVGAYAYSAYVIVGTYRCAVNCRTAGMARFVRISAIASLILLPVFMYFEFSGAFDGELSQFQQLNF
Ga0310686_1048421465	3300031708	Soil	GMTPAQFVQAPLQGKLSVSRVFWLYGVVGSLVYGLLEFFIDPANAFLIRLYTVGAYAYSAYVIVGTYRCAVNCRTAGMARFVRISAILSLILLPVFMYFELSGALDGELSQFQQLNF
Ga0310686_1087811051	3300031708	Soil	MTPTQFLQAPLQAKLSVTRVFWLYGVAGSLAYGCLEFFIDPGNTLLMRLYTVGGGLYSVYVIVGTYRCAVNCATVGMARFVRISCVLSLLLLPILTYFELSGALSDDLSQIEQLNL
Ga0310686_1172115764	3300031708	Soil	MTPAQFVQAPLEGKLSVSRVFWVYGVVGSLVYGLVEFFIDPANALLIRLYTVGAYAYSAYVIVGTYRCAVNCRTAGMARFVRISAIASLILLPVFMYFELSGAFDSELSQFQQLNF
Ga0307475_112541541	3300031754	Hardwood Forest Soil	VQAPLQGKLSVSRVFWLYGVVGSLVYGLLEFFIDPANAFLIRLYTVGAYAYSAYVIIGTYRCAVNCRTAGMARFVRICAIASLILLPVCMYFELSGALDGELSQFQQLNF
Ga0307478_116660881	3300031823	Hardwood Forest Soil	MTPTQFVQAPLQGKLSVSRVFWLYGVVGSLVYGLLEFFIDPANAFLIRLYTVGAYAYSAYVIVGTYRCAVNCRTAGMARFVRISAIASLILLPVFMYFELSGA
Ga0307471_1035506261	3300032180	Hardwood Forest Soil	QAPLEGRLSVSRVFWLYGVVGSLVYGLLEFFIDPANAFLIRLYTVGAYAYSAYVIIGTYRCAVNCRTAGMARFVRISAIASLILLPVFLYFELSGAFDGELSQFQQLNF
Ga0335075_100110296	3300032896	Soil	MQAPLKGELSVSRVFWLYGVVGSLVYGLLELFINPANAFLIRLYTVGAYAYSAYVIIGTYRCAVNCRTAGMARFVRISAIASLILLPVFMYFELSGALDGELSQFQQLDF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F093390

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences