NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F093373

Metagenome Family F093373

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F093373
Family Type Metagenome
Number of Sequences 106
Average Sequence Length 39 residues
Representative Sequence MKTSVINQIKTLLGMEVKLETMKLMDGITIFEADAFE
Number of Associated Samples 76
Number of Associated Scaffolds 106

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 98.11 %
% of genes from short scaffolds (< 2000 bps) 91.51 %
Associated GOLD sequencing projects 74
AlphaFold2 3D model prediction Yes
3D model pTM-score0.37

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (46.226 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment
(16.981 % of family members)
Environment Ontology (ENVO) Unclassified
(40.566 % of family members)
Earth Microbiome Project Ontology (EMPO) Unclassified
(42.453 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 16.92%    β-sheet: 9.23%    Coil/Unstructured: 73.85%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.37
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 106 Family Scaffolds
PF14550Peptidase_S78_2 18.87
PF13884Peptidase_S74 0.94



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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms53.77 %
UnclassifiedrootN/A46.23 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300005582|Ga0049080_10008472All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Mediterranean phage uvDeep-CGR1-KM17-C1013571Open in IMG/M
3300005582|Ga0049080_10316706Not Available501Open in IMG/M
3300006920|Ga0070748_1270475All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage608Open in IMG/M
3300007538|Ga0099851_1184773All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage764Open in IMG/M
3300007538|Ga0099851_1360647All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage506Open in IMG/M
3300007647|Ga0102855_1190610Not Available547Open in IMG/M
3300007708|Ga0102859_1117688Not Available770Open in IMG/M
3300008107|Ga0114340_1220551All Organisms → Viruses → Predicted Viral1103Open in IMG/M
3300008110|Ga0114343_1181571Not Available632Open in IMG/M
3300008266|Ga0114363_1209579Not Available589Open in IMG/M
3300009082|Ga0105099_10005626All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage6682Open in IMG/M
3300009085|Ga0105103_10825313Not Available539Open in IMG/M
3300009085|Ga0105103_10939421Not Available509Open in IMG/M
3300009158|Ga0114977_10148159All Organisms → Viruses → Predicted Viral1399Open in IMG/M
3300009165|Ga0105102_10827433All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage529Open in IMG/M
3300009169|Ga0105097_10077155All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1811Open in IMG/M
3300009169|Ga0105097_10143697All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1312Open in IMG/M
3300009169|Ga0105097_10391802All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes772Open in IMG/M
3300009169|Ga0105097_10825441Not Available529Open in IMG/M
3300009184|Ga0114976_10307942All Organisms → Viruses846Open in IMG/M
3300012013|Ga0153805_1083596Not Available541Open in IMG/M
3300012663|Ga0157203_1042110Not Available625Open in IMG/M
3300012663|Ga0157203_1051833All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage555Open in IMG/M
3300012663|Ga0157203_1053247Not Available547Open in IMG/M
3300013004|Ga0164293_10707628All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage645Open in IMG/M
3300013372|Ga0177922_10627758Not Available572Open in IMG/M
3300013372|Ga0177922_10949601All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes559Open in IMG/M
3300017766|Ga0181343_1081193All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Mediterranean phage uvDeep-CGR1-KM17-C101930Open in IMG/M
3300017774|Ga0181358_1038925All Organisms → cellular organisms → Bacteria1833Open in IMG/M
3300017778|Ga0181349_1108251All Organisms → Viruses → Predicted Viral1035Open in IMG/M
3300017778|Ga0181349_1220242Not Available647Open in IMG/M
3300017780|Ga0181346_1258134All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage606Open in IMG/M
3300017780|Ga0181346_1260722Not Available602Open in IMG/M
3300017780|Ga0181346_1277848Not Available575Open in IMG/M
3300020169|Ga0206127_1076805All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1516Open in IMG/M
3300020533|Ga0208364_1020172All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage943Open in IMG/M
3300021600|Ga0194059_1042157All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Mediterranean phage uvDeep-CGR1-KM17-C1011518Open in IMG/M
3300021962|Ga0222713_10113156All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Mediterranean phage uvDeep-CGR1-KM17-C1011924Open in IMG/M
3300021963|Ga0222712_10370476All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage878Open in IMG/M
3300021963|Ga0222712_10577653Not Available652Open in IMG/M
3300024343|Ga0244777_10499437All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes747Open in IMG/M
3300025889|Ga0208644_1069794Not Available1845Open in IMG/M
3300027193|Ga0208800_1030750All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage720Open in IMG/M
3300027203|Ga0208925_108574All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes744Open in IMG/M
3300027621|Ga0208951_1150206Not Available608Open in IMG/M
3300027693|Ga0209704_1087247All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage880Open in IMG/M
3300027721|Ga0209492_1002781All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage5509Open in IMG/M
3300027721|Ga0209492_1227282Not Available636Open in IMG/M
(restricted) 3300027728|Ga0247836_1052666All Organisms → Viruses → Predicted Viral2323Open in IMG/M
3300027732|Ga0209442_1245086All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage643Open in IMG/M
3300027785|Ga0209246_10001740All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes8515Open in IMG/M
3300027785|Ga0209246_10039364Not Available1809Open in IMG/M
3300027785|Ga0209246_10095847Not Available1161Open in IMG/M
3300027785|Ga0209246_10350392All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage561Open in IMG/M
3300027798|Ga0209353_10406611Not Available558Open in IMG/M
3300027805|Ga0209229_10105340All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1271Open in IMG/M
3300027808|Ga0209354_10276103All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage671Open in IMG/M
3300027808|Ga0209354_10324005Not Available610Open in IMG/M
3300027816|Ga0209990_10343565All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage659Open in IMG/M
3300027892|Ga0209550_10462037All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage771Open in IMG/M
3300031566|Ga0307378_10908348Not Available728Open in IMG/M
3300031566|Ga0307378_11416631Not Available534Open in IMG/M
3300031578|Ga0307376_10242739All Organisms → Viruses → Predicted Viral1217Open in IMG/M
3300031673|Ga0307377_10577598Not Available807Open in IMG/M
3300031707|Ga0315291_11469853Not Available538Open in IMG/M
3300031746|Ga0315293_11023859Not Available586Open in IMG/M
3300031746|Ga0315293_11140372Not Available545Open in IMG/M
3300031758|Ga0315907_10267122All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes1414Open in IMG/M
3300031758|Ga0315907_10456124All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Mediterranean phage uvDeep-CGR1-KM17-C1011020Open in IMG/M
3300031772|Ga0315288_10976014Not Available757Open in IMG/M
3300031772|Ga0315288_11420291Not Available579Open in IMG/M
3300031787|Ga0315900_11030721All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage537Open in IMG/M
3300031834|Ga0315290_11650408Not Available516Open in IMG/M
3300031857|Ga0315909_11011093Not Available501Open in IMG/M
3300031873|Ga0315297_11712899All Organisms → Viruses503Open in IMG/M
3300031952|Ga0315294_11105379Not Available651Open in IMG/M
3300031952|Ga0315294_11374131Not Available560Open in IMG/M
3300031952|Ga0315294_11421779Not Available547Open in IMG/M
3300031952|Ga0315294_11425243Not Available546Open in IMG/M
3300031952|Ga0315294_11559734Not Available513Open in IMG/M
3300031963|Ga0315901_10978841All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage593Open in IMG/M
3300031999|Ga0315274_11556820All Organisms → Viruses624Open in IMG/M
3300032046|Ga0315289_11198326All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage612Open in IMG/M
3300032053|Ga0315284_12242405Not Available542Open in IMG/M
3300032093|Ga0315902_10030800All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage6447Open in IMG/M
3300032116|Ga0315903_10298945All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1361Open in IMG/M
3300032118|Ga0315277_11684945Not Available532Open in IMG/M
3300032118|Ga0315277_11776000Not Available513Open in IMG/M
3300032397|Ga0315287_12307686All Organisms → Viruses584Open in IMG/M
3300034012|Ga0334986_0457375All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage636Open in IMG/M
3300034018|Ga0334985_0121830All Organisms → Viruses → Predicted Viral1814Open in IMG/M
3300034018|Ga0334985_0362297All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage883Open in IMG/M
3300034022|Ga0335005_0296496All Organisms → Viruses963Open in IMG/M
3300034050|Ga0335023_0499165Not Available630Open in IMG/M
3300034051|Ga0335024_0461534Not Available625Open in IMG/M
3300034061|Ga0334987_0233954Not Available1265Open in IMG/M
3300034066|Ga0335019_0847736Not Available512Open in IMG/M
3300034095|Ga0335022_0270263All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage979Open in IMG/M
3300034101|Ga0335027_0513547All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes748Open in IMG/M
3300034101|Ga0335027_0627265Not Available650Open in IMG/M
3300034101|Ga0335027_0880922Not Available510Open in IMG/M
3300034105|Ga0335035_0050110All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes2753Open in IMG/M
3300034120|Ga0335056_0489857Not Available649Open in IMG/M
3300034168|Ga0335061_0011717All Organisms → Viruses4554Open in IMG/M
3300034284|Ga0335013_0342909All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage937Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater16.98%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment16.98%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake16.04%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment10.38%
FreshwaterEnvironmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater6.60%
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine4.72%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous3.77%
SoilEnvironmental → Terrestrial → Soil → Clay → Unclassified → Soil3.77%
Freshwater LenticEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic2.83%
Freshwater, PlanktonEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton2.83%
FreshwaterEnvironmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater2.83%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water2.83%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake1.89%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater1.89%
FreshwaterEnvironmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater0.94%
Freshwater And SedimentEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater And Sediment0.94%
Anoxic Zone FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater0.94%
Surface IceEnvironmental → Aquatic → Freshwater → Ice → Unclassified → Surface Ice0.94%
SeawaterEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Seawater0.94%
Lake WaterEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Lake Water0.94%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300005582Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRFEnvironmentalOpen in IMG/M
3300005936Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UKSEnvironmentalOpen in IMG/M
3300006920Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12EnvironmentalOpen in IMG/M
3300007538Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaGEnvironmentalOpen in IMG/M
3300007647Estuarine microbial communities from the Columbia River estuary - metaG 1370B-02EnvironmentalOpen in IMG/M
3300007708Estuarine microbial communities from the Columbia River estuary - metaG 1371B-02EnvironmentalOpen in IMG/M
3300008107Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0046-3-NAEnvironmentalOpen in IMG/M
3300008110Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0048-3-NAEnvironmentalOpen in IMG/M
3300008266Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample HABS-E2014-0108-C-NAEnvironmentalOpen in IMG/M
3300009082Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm May2015EnvironmentalOpen in IMG/M
3300009085Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 10-12cm September2015EnvironmentalOpen in IMG/M
3300009158Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaGEnvironmentalOpen in IMG/M
3300009165Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 1-3cm September2015EnvironmentalOpen in IMG/M
3300009169Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm May2015EnvironmentalOpen in IMG/M
3300009184Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_EF_MetaGEnvironmentalOpen in IMG/M
3300012013Freshwater microbial communities from Eastern Basin Lake Erie, Ontario, Canada - Station 67 - Surface IceEnvironmentalOpen in IMG/M
3300012663Freshwater microbial communities from Indian River, Ontario, Canada - S50EnvironmentalOpen in IMG/M
3300013004Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES118 metaGEnvironmentalOpen in IMG/M
3300013372Freshwater microbial communities from Lake Erie, Ontario, Canada. Combined Assembly of 10 SPsEnvironmentalOpen in IMG/M
3300017766Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.S.DEnvironmentalOpen in IMG/M
3300017774Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.DEnvironmentalOpen in IMG/M
3300017778Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.S.DEnvironmentalOpen in IMG/M
3300017780Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.D.NEnvironmentalOpen in IMG/M
3300020169Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160419_1EnvironmentalOpen in IMG/M
3300020533Freshwater microbial communities from Lake Mendota, WI - 08JUN2012 deep hole epilimnion (SPAdes)EnvironmentalOpen in IMG/M
3300021600Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L626-11mEnvironmentalOpen in IMG/M
3300021962Estuarine water microbial communities from San Francisco Bay, California, United States - C33_649DEnvironmentalOpen in IMG/M
3300021963Estuarine water microbial communities from San Francisco Bay, California, United States - C33_657DEnvironmentalOpen in IMG/M
3300024343Combined assembly of estuarine microbial communities from Columbia River, Washington, USA >3um size fractionEnvironmentalOpen in IMG/M
3300025889Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18 (SPAdes)EnvironmentalOpen in IMG/M
3300027193Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.541 (SPAdes)EnvironmentalOpen in IMG/M
3300027203Estuarine microbial communities from the Columbia River estuary - metaG 1371A-3 (SPAdes)EnvironmentalOpen in IMG/M
3300027621Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG MI27MSRF (SPAdes)EnvironmentalOpen in IMG/M
3300027693Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 1-3cm September2015 (SPAdes)EnvironmentalOpen in IMG/M
3300027721Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm May2015 (SPAdes)EnvironmentalOpen in IMG/M
3300027728 (restricted)Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2015_14mEnvironmentalOpen in IMG/M
3300027732Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.DD (SPAdes)EnvironmentalOpen in IMG/M
3300027785Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SN (SPAdes)EnvironmentalOpen in IMG/M
3300027798Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SD (SPAdes)EnvironmentalOpen in IMG/M
3300027805Freshwater and sediment microbial communities from dead zone in Sandusky Bay, Ohio, USA (SPAdes)EnvironmentalOpen in IMG/M
3300027808Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.DD (SPAdes)EnvironmentalOpen in IMG/M
3300027816Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel5S_2200h metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027892Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (SPAdes)EnvironmentalOpen in IMG/M
3300031566Soil microbial communities from Risofladan, Vaasa, Finland - UN-1EnvironmentalOpen in IMG/M
3300031578Soil microbial communities from Risofladan, Vaasa, Finland - TR-2EnvironmentalOpen in IMG/M
3300031673Soil microbial communities from Risofladan, Vaasa, Finland - TR-3EnvironmentalOpen in IMG/M
3300031707Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_20EnvironmentalOpen in IMG/M
3300031746Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_20EnvironmentalOpen in IMG/M
3300031758Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA123EnvironmentalOpen in IMG/M
3300031772Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_20EnvironmentalOpen in IMG/M
3300031787Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA114EnvironmentalOpen in IMG/M
3300031834Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_0EnvironmentalOpen in IMG/M
3300031857Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA125EnvironmentalOpen in IMG/M
3300031873Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G15_0EnvironmentalOpen in IMG/M
3300031952Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_40EnvironmentalOpen in IMG/M
3300031963Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA116EnvironmentalOpen in IMG/M
3300031999Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_20EnvironmentalOpen in IMG/M
3300032046Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_40EnvironmentalOpen in IMG/M
3300032053Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_16EnvironmentalOpen in IMG/M
3300032093Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA117EnvironmentalOpen in IMG/M
3300032116Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA119EnvironmentalOpen in IMG/M
3300032118Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_15EnvironmentalOpen in IMG/M
3300032397Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_0EnvironmentalOpen in IMG/M
3300034012Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Aug2017-rr0027EnvironmentalOpen in IMG/M
3300034018Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME04Jul2014-rr0021EnvironmentalOpen in IMG/M
3300034022Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Apr2018-rr0058EnvironmentalOpen in IMG/M
3300034050Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07May2013-rr0095EnvironmentalOpen in IMG/M
3300034051Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME13May2013-rr0097EnvironmentalOpen in IMG/M
3300034061Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Sep2004-rr0028EnvironmentalOpen in IMG/M
3300034066Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME11Jul2017-rr0087EnvironmentalOpen in IMG/M
3300034095Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Feb2014D0-rr0091EnvironmentalOpen in IMG/M
3300034101Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME19Sep2005-rr0107EnvironmentalOpen in IMG/M
3300034105Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME15May2014-rr0127EnvironmentalOpen in IMG/M
3300034120Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07Aug2014-rr0172EnvironmentalOpen in IMG/M
3300034168Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME06Apr2016-rr0183EnvironmentalOpen in IMG/M
3300034284Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME08Jul2016-rr0075EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
Ga0049080_1000847213300005582Freshwater LenticMKTSVINQIKTLLGMEVKLETMKLMDGITIFEADAF
Ga0049080_1031670623300005582Freshwater LenticMKTSVINQIKTLLGMEVKLETMKLMDGITIFEADA
Ga0075124_1029250633300005936Lake WaterMKEKSIINQVKTLLGMEVSLETMTLENGTVLEAEAFEAGNE
Ga0070748_127047533300006920AqueousMNVINEIKTLLGMEVKLAQMKLVDGVTVIEAEVFE
Ga0099851_118477333300007538AqueousMSNVINQIKTLLGMEVKLAQMALENGTIIEAEVFEA
Ga0099851_136064733300007538AqueousMSVINEIKTLLGMEVKLAQMKLMDGMTVIEADSFQL
Ga0102855_119061023300007647EstuarineMKNSTINKIKSLLGMEVKLEQMMLIDGTTVLEADAFEMDN
Ga0102859_111768843300007708EstuarineMKTSVINQIKTLLGMEVKLETMKLMDGITIFEADAFEMDK
Ga0114340_122055123300008107Freshwater, PlanktonMKNSLINQIKTLLGMEVKLETMKLSDGVTVLEAEMFENKK*
Ga0114343_118157113300008110Freshwater, PlanktonMKNSLINQIKTLLGMEVKLETMKLSDGVTVLEAEMFEAGN
Ga0114363_120957913300008266Freshwater, PlanktonMKNSLINQIKTLLGMEVKLETMKLSDGVTVLEAEM
Ga0105099_1000562613300009082Freshwater SedimentMNVINEIKTLLGMEVKLAQMKLKDGVTIIEAEAFEM
Ga0105103_1082531313300009085Freshwater SedimentMKNSLINQIKTLLGMEVKLEQMKLMDGVTVLEADM
Ga0105103_1093942123300009085Freshwater SedimentMKNSLINQIKTLLGMEVKLEQMKLMDGVSILEAESFEAG
Ga0114977_1014815913300009158Freshwater LakeMKTSVINQIKTLLGMEVKLETMKLADGITIFEADA
Ga0105102_1082743323300009165Freshwater SedimentMNVLNEIKTLLGMEVNLAQMKLKDGVTVIEAEMFEA
Ga0105097_1007715553300009169Freshwater SedimentMNVINEIKTLLGMEVKLAQMKLEDGVTVIEAEAFE
Ga0105097_1014369713300009169Freshwater SedimentMNVINEIKTLLGMEVKLAQMKLKDGVTVIEADAFETDNA
Ga0105097_1039180233300009169Freshwater SedimentMNVINEIKTLLGMEVKLAQMKLKDGVTVIEADAFEM
Ga0105097_1082544123300009169Freshwater SedimentMKNSLINQIKTLLGMEVKLEQMKLMDGVSIIEAESFEAGSE
Ga0114976_1030794213300009184Freshwater LakeMKTSVINQIKTLLGMEVKLETMKLADGITIFEADAFEM
Ga0153805_108359613300012013Surface IceMKTSVINQIKTLLGMEVKLETMKLMDGITIFEADAFEMDKE
Ga0157203_104211013300012663FreshwaterMKNSTVNKIKALLGMEVSLEQMKLMDGITILEADAF
Ga0157203_105183323300012663FreshwaterMKNSTVNKIKALLGMEVKLEQMKLMDGITILEADAFEMDNE
Ga0157203_105324723300012663FreshwaterMKNSTVNKIKSLLGMEVKLEQMMLMDGITILEADAFEMDNE
Ga0164293_1070762813300013004FreshwaterMKNSLINQIKTLLGMEVKLEQMKLVDGVTVLEADSFEAGNE
Ga0177922_1062775823300013372FreshwaterMKNSLINQIKTLLGMEVKLEQMKLMDGVTVLEADMFEAGNE
Ga0177922_1094960133300013372FreshwaterMKTNVLTQIKQLLGMEVKLEMMKLADGMTMIEADSFEPEMAV
Ga0181343_108119343300017766Freshwater LakeMKNSLINQIKTLLGMEVKLETIKLSDGVTVLEAEMFEAG
Ga0181358_103892543300017774Freshwater LakeMNVINEIKTLLGMEVKLAQMKLKDGVTVLEADAFETDNA
Ga0181349_110825113300017778Freshwater LakeMKTSVINQIKTLLGMEVKLETMKLMDGITIFEADTFETDKEVFI
Ga0181349_122024233300017778Freshwater LakeMKTSVINQIKTLLGMEVKLETMKLMDGITIFEADAFETV
Ga0181346_125813423300017780Freshwater LakeMNVVNQIKELLGMDVKLAQMKLMDGVTVIEAETFE
Ga0181346_126072223300017780Freshwater LakeMKTSVINQIKTLLGMEVKLETMKLMDGITIFEADTFETD
Ga0181346_127784813300017780Freshwater LakeMKTSVINQIKTLLGMEVKLETMKLMDGITIFEADAFEMDN
Ga0206127_107680513300020169SeawaterMNKIDQIKTLLGMEVKLETMKLVNGTEIEAEVFEA
Ga0208364_102017243300020533FreshwaterMKNSLINQIKTLLGMEVKLEQMKLMDGVTVLEADMFEAG
Ga0194059_104215713300021600Anoxic Zone FreshwaterMKTSVINQIKTLLGMEVKLMQMKMADGVTIVEADKFEMDNEVFVVT
Ga0222713_1011315613300021962Estuarine WaterMKNSTINKIKALLGMEVSLEMMKLADGQTVLEADAFEM
Ga0222712_1037047643300021963Estuarine WaterMNVINEIKTLLGMEVKLAQMKLKDGVTILEADAFEVD
Ga0222712_1057765313300021963Estuarine WaterMKNSTINKIKALLGMEVSLEMMKLADGVTILEADAFEMD
Ga0244777_1049943713300024343EstuarineMKNSTINKIKSLLGMEVKLEQMMLIDGTTVLEADAFEMDNEVFIV
Ga0208644_106979413300025889AqueousMKDKSVINQIKTLLGLEVKLEQMTLENGTVIEADS
Ga0208800_103075033300027193EstuarineMNVINEIKTLLGMEVKLAQMKLEDGVTVIEAEVFEAEA
Ga0208925_10857413300027203EstuarineMKNSTINKIKSLLGMEVKLEQMMLIDGTTVLEADAFEMDNEVFI
Ga0208951_115020633300027621Freshwater LenticMKTSVINQIKTLLGMDVKLEQRKMADGVTLIEADAF
Ga0209704_108724713300027693Freshwater SedimentMSNVINQIKTLLGMEVKLAQMALENGTIIEAEVFEAGASVF
Ga0209492_100278113300027721Freshwater SedimentMNVINEIKTLLGMEVKLAQMKLKDGVTVIEADAFE
Ga0209492_122728233300027721Freshwater SedimentMKNSLINQIKTLLGMEVKLEQMKLMDGVTVLEADMFEA
(restricted) Ga0247836_105266613300027728FreshwaterMKNSLINQIKTLLGMEVKLEQMKLADGVTVFEADTFEPEMEIVIVTEDE
Ga0209442_124508613300027732Freshwater LakeMNVINEIKTLLGMEVKLAQMKLKDGVTVIEADAFEMDNNV
Ga0209246_10001740113300027785Freshwater LakeMNVINEIKTLLGMEVKLAQMKLKDGVTVIEADAFEMDN
Ga0209246_1003936443300027785Freshwater LakeMKTSVINQIKTLLGMEVKLETMKLMDGITIFEADTFE
Ga0209246_1009584753300027785Freshwater LakeMKTSVINQIKTLLGMEVKLETMKLMDGITIFEADTF
Ga0209246_1035039223300027785Freshwater LakeMKTSVINQIKTLLGMDVKLEQRKMADGVTLIEADAFEMDNEVFVIT
Ga0209353_1040661123300027798Freshwater LakeMKTSVINQIKTLLGMEVKLETMKLMDGITIFEADTFETDKEVF
Ga0209229_1010534043300027805Freshwater And SedimentMSNVINQIKTLLGMEVKLAQMALENGTIIEAEVFE
Ga0209354_1027610313300027808Freshwater LakeMNIINQIKTLLNMEVKLEQLRLADGMTVLEADSFEPEMEVF
Ga0209354_1032400523300027808Freshwater LakeMKTSVINQIKTLLGMEVKLETIKLIDGITIFEADTFETDKEVFIV
Ga0209990_1034356533300027816Freshwater LakeMLNMKKNVINQIKELLGMEVKLATMKLSDGVTILEAEMFE
Ga0209550_1046203733300027892Freshwater LakeMNVINEIKTLLGMEVKLAQMKLKDGVTVLEADAFETDNAV
Ga0307378_1090834833300031566SoilMKTSVINQIKTLLGMDVKLEQRKMADGVTLIEADA
Ga0307378_1141663113300031566SoilMKTSVINQIKTLLGMEVKLETIKLIDGITIFEADTFETEKEIFI
Ga0307376_1024273953300031578SoilMKTSVINQIKTLLGMEVKLETIKLIDGITIFEADSFEAEKE
Ga0307377_1057759813300031673SoilMKTSVINQIKTLLGMEVKLETIKLIDGITIFEADTFETDKEVF
Ga0315291_1146985313300031707SedimentMKTSVINQIKTLLGMEVKLETMKLMDGITIFEADAFETD
Ga0315293_1102385913300031746SedimentMKTSVINQIKTLLGMEVKLETMKLMDGITIFEADAFETDKE
Ga0315293_1114037223300031746SedimentMKTSVINQIKTLLGMEVKLETMKLMDGITIFEADAFET
Ga0315907_1026712213300031758FreshwaterMKNSLINQIKTLLGMEVNLEQMKLADGVTVLEADMFE
Ga0315907_1045612413300031758FreshwaterMKNSLINQIKTLLGMEVKLETMKLSDGVTVLEAEMFEAG
Ga0315288_1097601413300031772SedimentMKTSVINQIKTLLGMEVKLETMKLMDGITIFEADTFET
Ga0315288_1142029113300031772SedimentMKTSVINQIKTLLGMEVKLETIKLMDGITIFEADTFET
Ga0315900_1103072123300031787FreshwaterMKNSLINQIKTLLGMEVKLEQMKLMDGVTVLEADSFEAG
Ga0315290_1165040823300031834SedimentMKTSVINQIKTLLGMEVKLETMKLMDGITIFEAEA
Ga0315909_1101109323300031857FreshwaterMKNSLINQIKTLLGMEVKLETMKLSDGVTVLEAEMF
Ga0315297_1171289913300031873SedimentMKTSVINQIKNLLGMEVKLEQRKMADGVTLIEADAFEIENEVFVITE
Ga0315294_1110537913300031952SedimentMKTSVINQIKTLLGMEVKLETMKLMDGITIFEADT
Ga0315294_1137413113300031952SedimentMKTSVINQIKTLLGMEVKLETMKLMDGITIFEADAFETDKEV
Ga0315294_1142177923300031952SedimentMKTSVINQIKTLLGMDVKLEQRKMADGVTLIEADT
Ga0315294_1142524313300031952SedimentMKTSVINQIKTLLGMEVKLETMKLMDGITIFEADTFETDK
Ga0315294_1155973413300031952SedimentMKTSVINQIKTLLGMEVKLETMKLMDGITIFEADTFETDKE
Ga0315901_1097884113300031963FreshwaterMKNSLINQIKTLLGMEVKLEQMKLMDGVTVLEADMFEAGNEIFVVTED
Ga0315274_1155682023300031999SedimentMKTSVINQIKTLLGMDVKLEQRKMADGVTLIEADAFEM
Ga0315289_1119832613300032046SedimentMKTSVINQIKTLLGMDVKLEQRKMADGVTLIEADAFEMDNEVFVI
Ga0315284_1224240513300032053SedimentMKTSVINQIKTLLGMEVKLETMKLMDGITIFEADAFEM
Ga0315902_1003080073300032093FreshwaterMKTNVLTQIKQLLGMEVKLEMMKLADGMTMIEADSF
Ga0315903_1029894513300032116FreshwaterMKNSLINQIKTLLGMEVKLETMKLSDGVTVLEADMFEAG
Ga0315277_1168494513300032118SedimentMKTSVINQIKTLLGMEVKLETMKLMDGITIFEADAFE
Ga0315277_1177600023300032118SedimentMKTSVINQIKTLLGMEVKLETIKLIDGITIFEADAFET
Ga0315287_1230768613300032397SedimentMKTSVINQIKNLLGMEVKLEQRKMADGVTLIEADAFEIENEVF
Ga0334986_0457375_517_6363300034012FreshwaterMKNSLINQIKTLLGMEVKLEQMKLMDGVTVLEADMFEAGN
Ga0334985_0121830_1682_18133300034018FreshwaterMKNSLINQIKTLLGMEVKLEQMKLMDGVSILEAESFEAGSEVFI
Ga0334985_0362297_763_8823300034018FreshwaterMNVVNQIKELLGMEVKLAQMKLMDGVTVIEAEAFEPEMAV
Ga0335005_0296496_3_1193300034022FreshwaterMKTSVINQIKTLLGMEVKLETMKLMDGITIFEADAFEMD
Ga0335023_0499165_3_1223300034050FreshwaterMKNSLINQIKTLLGMEVKLEQMMLADGVTVLEADSFEPEM
Ga0335024_0461534_510_6233300034051FreshwaterMSNVINQIKTLLGMEVKLAQMALENGTIIEAEMFEAGA
Ga0334987_0233954_1131_12653300034061FreshwaterMLNMKKNVINQIKELLGMEVKLATMKLSDGMTILEAEVFEAGAEV
Ga0335019_0847736_1_1083300034066FreshwaterMKNSLINQIKTLLGMEVKLEQMKLMDGVTVLEADMF
Ga0335022_0270263_2_1093300034095FreshwaterMNVREAINTIKTYLNMEVKLAKMMLVDGVTVLEANE
Ga0335027_0513547_2_1333300034101FreshwaterMKNSLINQIKTLLGMEVKLEQMKLMDGVTVLEADMFEAGNEIFV
Ga0335027_0627265_1_1083300034101FreshwaterMKNSLINQIKTLLGMEVKLEQMKLMDGVTVLEADSF
Ga0335027_0880922_2_1123300034101FreshwaterMKNSLINQIKTLLGMEVKLETMKLSDGVTVLEAEMFE
Ga0335035_0050110_2_1063300034105FreshwaterMNIINQIKTLLNMEVKLEQMKLADGMTVLEADSFA
Ga0335056_0489857_512_6493300034120FreshwaterMKNSLINQIKTLLGMEVKLEQMKLMDGVTVLEADMFEAGNEIFVVT
Ga0335061_0011717_4448_45523300034168FreshwaterMNIINQIKTLLNMEVKLEQMKLADGMTVLEADSFE
Ga0335013_0342909_1_1353300034284FreshwaterMKNSLINQIKTLLGMEVKLEQMKLMDGVTVLEADMFEAGNEIFVV


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