Metagenome / Metatranscriptome Family F093334

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F093334
Family Type	Metagenome / Metatranscriptome
Number of Sequences	106
Average Sequence Length	63 residues
Representative Sequence	MSLGDFTHSNGEMALIAVMLHQGWGAVIELANTLRNEHGGEIAITDFLNSGIEERMLSSQGSAS
Number of Associated Samples	89
Number of Associated Scaffolds	106

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	83.50 %
% of genes near scaffold ends (potentially truncated)	17.92 %
% of genes from short scaffolds (< 2000 bps)	81.13 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.35

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (80.189 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil (25.472 % of family members)
Environment Ontology (ENVO)	Unclassified (29.245 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (44.340 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 51.09% β-sheet: 0.00% Coil/Unstructured: 48.91%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.35
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.35
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF02749	QRPTase_N	27.36
PF04909	Amidohydro_2	7.55
PF13561	adh_short_C2	1.89
PF15902	Sortilin-Vps10	1.89
PF13191	AAA_16	0.94
PF02120	Flg_hook	0.94
PF12697	Abhydrolase_6	0.94
PF13546	DDE_5	0.94
PF13359	DDE_Tnp_4	0.94
PF05992	SbmA_BacA	0.94
PF02347	GDC-P	0.94

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG0157	Nicotinate-nucleotide pyrophosphorylase	Coenzyme transport and metabolism [H]	27.36
COG1488	Nicotinic acid phosphoribosyltransferase	Coenzyme transport and metabolism [H]	27.36
COG0403	Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain	Amino acid transport and metabolism [E]	0.94
COG1003	Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain	Amino acid transport and metabolism [E]	0.94
COG3144	Flagellar hook-length control protein FliK	Cell motility [N]	0.94

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	80.19 %
Unclassified	root	N/A	19.81 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	80.19 %
Unclassified	root	N/A	19.81 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	80.19 %
Unclassified	root	N/A	19.81 %

Name	Rank	Taxonomy	Distribution
Nitrospinae/Tectomicrobia group	clade	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group	45.28 %
Unclassified	root	N/A	19.81 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	1.89 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.94 %

Name	Rank	Taxonomy	Distribution
Candidatus Tectomicrobia	phylum	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia	45.28 %
Unclassified	root	N/A	19.81 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	1.89 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.94 %

Name	Rank	Taxonomy	Distribution
Candidatus Entotheonella	genus	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	45.28 %
Unclassified	root	N/A	19.81 %
candidate division NC10	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10	1.89 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.94 %

Name	Rank	Taxonomy	Distribution
Candidatus Entotheonella	genus	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	45.28 %
Unclassified	root	N/A	19.81 %
unclassified candidate division NC10	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10 → unclassified candidate division NC10	1.89 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.94 %

Name	Rank	Taxonomy	Distribution
Candidatus Entotheonella	genus	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	45.28 %
Unclassified	root	N/A	19.81 %
candidate division NC10 bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10 → unclassified candidate division NC10 → candidate division NC10 bacterium	1.89 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.94 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300007255\|Ga0099791_10066261	All Organisms → cellular organisms → Bacteria	1632	Open in IMG/M
3300007255\|Ga0099791_10396889	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	664	Open in IMG/M
3300009038\|Ga0099829_10025097	All Organisms → cellular organisms → Bacteria → Proteobacteria	4165	Open in IMG/M
3300009088\|Ga0099830_10170316	Not Available	1688	Open in IMG/M
3300009089\|Ga0099828_10021755	All Organisms → cellular organisms → Bacteria	5021	Open in IMG/M
3300009090\|Ga0099827_10052045	All Organisms → cellular organisms → Bacteria	3083	Open in IMG/M
3300009090\|Ga0099827_10060667	All Organisms → cellular organisms → Bacteria	2883	Open in IMG/M
3300009094\|Ga0111539_10214795	All Organisms → cellular organisms → Bacteria	2240	Open in IMG/M
3300009094\|Ga0111539_10307136	All Organisms → cellular organisms → Bacteria	1846	Open in IMG/M
3300009094\|Ga0111539_13221672	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	526	Open in IMG/M
3300009100\|Ga0075418_10341713	Not Available	1598	Open in IMG/M
3300009100\|Ga0075418_10455967	Not Available	1370	Open in IMG/M
3300009137\|Ga0066709_100046422	All Organisms → cellular organisms → Bacteria	4845	Open in IMG/M
3300009137\|Ga0066709_100074382	All Organisms → cellular organisms → Bacteria	4012	Open in IMG/M
3300009137\|Ga0066709_101170896	Not Available	1132	Open in IMG/M
3300009147\|Ga0114129_10029043	All Organisms → cellular organisms → Bacteria	7834	Open in IMG/M
3300009444\|Ga0114945_10054693	All Organisms → cellular organisms → Bacteria	2180	Open in IMG/M
3300009444\|Ga0114945_10620306	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	656	Open in IMG/M
3300009553\|Ga0105249_12447413	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	595	Open in IMG/M
3300009691\|Ga0114944_1057005	All Organisms → cellular organisms → Bacteria	1439	Open in IMG/M
3300009792\|Ga0126374_11445653	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	562	Open in IMG/M
3300009802\|Ga0105073_1053339	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	543	Open in IMG/M
3300009814\|Ga0105082_1040238	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	768	Open in IMG/M
3300009815\|Ga0105070_1129559	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	512	Open in IMG/M
3300009817\|Ga0105062_1125744	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	523	Open in IMG/M
3300009836\|Ga0105068_1102462	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10 → unclassified candidate division NC10 → candidate division NC10 bacterium	559	Open in IMG/M
3300010042\|Ga0126314_11407858	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	524	Open in IMG/M
3300010043\|Ga0126380_12108887	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	519	Open in IMG/M
3300010046\|Ga0126384_11167271	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	709	Open in IMG/M
3300010047\|Ga0126382_10203167	Not Available	1411	Open in IMG/M
3300010047\|Ga0126382_10894369	Not Available	768	Open in IMG/M
3300010061\|Ga0127462_161158	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	511	Open in IMG/M
3300010062\|Ga0127426_138721	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	507	Open in IMG/M
3300010067\|Ga0127432_145468	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	610	Open in IMG/M
3300010068\|Ga0127442_120816	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	528	Open in IMG/M
3300010081\|Ga0127457_1025104	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	663	Open in IMG/M
3300010100\|Ga0127440_1049144	All Organisms → cellular organisms → Bacteria	2061	Open in IMG/M
3300010112\|Ga0127458_1023623	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	569	Open in IMG/M
3300010115\|Ga0127495_1138617	Not Available	739	Open in IMG/M
3300010125\|Ga0127443_1114898	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	600	Open in IMG/M
3300010132\|Ga0127455_1068551	Not Available	750	Open in IMG/M
3300010139\|Ga0127464_1140165	Not Available	822	Open in IMG/M
3300010145\|Ga0126321_1214610	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	524	Open in IMG/M
3300010145\|Ga0126321_1247502	Not Available	1117	Open in IMG/M
3300010145\|Ga0126321_1497687	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	633	Open in IMG/M
3300010303\|Ga0134082_10338594	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	635	Open in IMG/M
3300010358\|Ga0126370_11504625	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	640	Open in IMG/M
3300010359\|Ga0126376_10658167	All Organisms → cellular organisms → Bacteria	1001	Open in IMG/M
3300010361\|Ga0126378_11224655	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	848	Open in IMG/M
3300010362\|Ga0126377_10754407	All Organisms → cellular organisms → Bacteria	1029	Open in IMG/M
3300010362\|Ga0126377_13460147	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	510	Open in IMG/M
3300010366\|Ga0126379_13308625	Not Available	540	Open in IMG/M
3300010896\|Ga0138111_1043317	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	548	Open in IMG/M
3300011271\|Ga0137393_10255418	Not Available	1488	Open in IMG/M
3300011432\|Ga0137428_1014333	All Organisms → cellular organisms → Bacteria	1998	Open in IMG/M
3300011441\|Ga0137452_1244084	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	606	Open in IMG/M
3300011445\|Ga0137427_10452708	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	530	Open in IMG/M
3300012096\|Ga0137389_10309520	All Organisms → cellular organisms → Bacteria	1338	Open in IMG/M
3300012189\|Ga0137388_10814210	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	865	Open in IMG/M
3300012199\|Ga0137383_10040422	All Organisms → cellular organisms → Bacteria	3311	Open in IMG/M
3300012201\|Ga0137365_10200367	All Organisms → cellular organisms → Bacteria	1492	Open in IMG/M
3300012202\|Ga0137363_10239958	All Organisms → cellular organisms → Bacteria	1470	Open in IMG/M
3300012204\|Ga0137374_10035395	All Organisms → cellular organisms → Bacteria	5375	Open in IMG/M
3300012206\|Ga0137380_10187893	All Organisms → cellular organisms → Bacteria	1877	Open in IMG/M
3300012206\|Ga0137380_10719767	All Organisms → cellular organisms → Bacteria	865	Open in IMG/M
3300012210\|Ga0137378_10042855	All Organisms → cellular organisms → Bacteria	4056	Open in IMG/M
3300012212\|Ga0150985_117309278	Not Available	668	Open in IMG/M
3300012212\|Ga0150985_122725470	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	556	Open in IMG/M
3300012356\|Ga0137371_11087338	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	602	Open in IMG/M
3300012358\|Ga0137368_10165472	All Organisms → cellular organisms → Bacteria	1614	Open in IMG/M
3300012359\|Ga0137385_10587766	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10 → unclassified candidate division NC10 → candidate division NC10 bacterium	937	Open in IMG/M
3300012361\|Ga0137360_10096069	All Organisms → cellular organisms → Bacteria	2256	Open in IMG/M
3300012362\|Ga0137361_11177274	All Organisms → cellular organisms → Bacteria	689	Open in IMG/M
3300012372\|Ga0134037_1019948	Not Available	1212	Open in IMG/M
3300012373\|Ga0134042_1036378	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	581	Open in IMG/M
3300012374\|Ga0134039_1262887	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	507	Open in IMG/M
3300012375\|Ga0134034_1132933	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	524	Open in IMG/M
3300012379\|Ga0134058_1233920	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	603	Open in IMG/M
3300012382\|Ga0134038_1069170	All Organisms → cellular organisms → Bacteria	670	Open in IMG/M
3300012391\|Ga0134035_1215936	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	515	Open in IMG/M
3300012392\|Ga0134043_1051918	Not Available	954	Open in IMG/M
3300012400\|Ga0134048_1160511	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	626	Open in IMG/M
3300012403\|Ga0134049_1387543	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	623	Open in IMG/M
3300012407\|Ga0134050_1445377	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	591	Open in IMG/M
3300012469\|Ga0150984_106317423	All Organisms → cellular organisms → Bacteria	1005	Open in IMG/M
3300012532\|Ga0137373_10148957	All Organisms → cellular organisms → Bacteria	1977	Open in IMG/M
3300012948\|Ga0126375_10473541	Not Available	926	Open in IMG/M
3300012971\|Ga0126369_10076409	All Organisms → cellular organisms → Bacteria	2956	Open in IMG/M
3300013306\|Ga0163162_10294451	All Organisms → cellular organisms → Bacteria	1755	Open in IMG/M
3300014488\|Ga0182001_10082674	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	953	Open in IMG/M
3300014968\|Ga0157379_12615191	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	506	Open in IMG/M
3300015245\|Ga0137409_10750897	All Organisms → cellular organisms → Bacteria	810	Open in IMG/M
3300015371\|Ga0132258_10001836	All Organisms → cellular organisms → Bacteria	38371	Open in IMG/M
3300015371\|Ga0132258_10705211	All Organisms → cellular organisms → Bacteria	2541	Open in IMG/M
3300030903\|Ga0308206_1132763	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	586	Open in IMG/M
3300034643\|Ga0370545_041564	Not Available	865	Open in IMG/M
3300034643\|Ga0370545_105385	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	617	Open in IMG/M
3300034644\|Ga0370548_113309	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	561	Open in IMG/M
3300034659\|Ga0314780_198233	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	523	Open in IMG/M
3300034662\|Ga0314783_058185	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	744	Open in IMG/M
3300034666\|Ga0314788_149373	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	569	Open in IMG/M
3300034667\|Ga0314792_023567	Not Available	1186	Open in IMG/M
3300034680\|Ga0370541_055224	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	528	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	86.79%
Host-Associated	Host-Associated	13.21%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	78.30%
Plants	Host-Associated → Plants	13.21%
Aquatic	Environmental → Aquatic	8.49%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	78.30%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.49%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.72%
Freshwater	Environmental → Aquatic → Freshwater	2.83%
Thermal Springs	Environmental → Aquatic → Thermal Springs	2.83%
Sediment	Environmental → Aquatic → Sediment	2.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	73.58%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.55%
Sand	Environmental → Terrestrial → Soil → Sand	4.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.77%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	2.83%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	2.83%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.83%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.94%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	66.98%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.55%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	4.72%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.77%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.77%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	2.83%
Unclassified	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified	2.83%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.83%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.94%

Habitat	Taxonomy	Distribution
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	25.47%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	22.64%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	12.26%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.66%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.72%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	4.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.77%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	2.83%
Thermal Springs	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Thermal Springs	2.83%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	2.83%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.83%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.89%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.94%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.94%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.94%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009444	Hot spring microbial communities from Beatty, Nevada to study Microbial Dark Matter (Phase II) - OV2 TP3	Environmental	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009691	Hot spring microbial communities from Beatty, Nevada to study Microbial Dark Matter (Phase II) - OV2 TP2	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300009802	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_50_60	Environmental	Open in IMG/M
3300009814	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_50_60	Environmental	Open in IMG/M
3300009815	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_0_10	Environmental	Open in IMG/M
3300009817	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_10_20	Environmental	Open in IMG/M
3300009836	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_10_20	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010061	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_2_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010062	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_2_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010067	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_2_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010068	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_5_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010081	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010100	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_5_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010112	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010115	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010125	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_5_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010132	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010139	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_2_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010145	Soil microbial communities from Hawaii, USA to study soil gas exchange rates - KP-HI-INT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010896	Grasslands soil microbial communities from Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300011432	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT718_2	Environmental	Open in IMG/M
3300011441	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT513_2	Environmental	Open in IMG/M
3300011445	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT700_2	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012372	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012373	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012374	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012375	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012379	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012382	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012391	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012392	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012396	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012400	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012403	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012406	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012407	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014488	Bulk soil microbial communities from Mexico - San Felipe (SF) metaG	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300030903	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_369 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034643	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_120 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034644	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_123 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034659	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034662	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034666	Metatranscriptome of lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8R2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034667	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034680	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_116 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0099791_100662612	3300007255	Vadose Zone Soil	MSLGDFTHSDGEMALIAVVLHEGRRAVIELANTLCNEHGGEITITDLLNSGIEERMLSSQGSAS*
Ga0099791_103968891	3300007255	Vadose Zone Soil	MPFGDFTHGNGEMAFLFITFHEGWGAVVKLTNTFCNEHGRKIAIADFLNSGI
Ga0099829_100250971	3300009038	Vadose Zone Soil	MSLGDFTHRNGEMAFIFIAFHKSGRAVVELANTLRNEHGGKIAIADFLNSGIEDRMLGSQGSAS*
Ga0099830_101703161	3300009088	Vadose Zone Soil	MSLGDFTHSNGEMALIAVMLHQGRRAVIELANTLCNEHGGEITITDLLNSGIEERMLSSQGSAS*
Ga0099828_100217554	3300009089	Vadose Zone Soil	MSLGDFTHSNGEMALIAVMLHQGRRAVIELANTLRNEHSGEIAITNFLNSGIEERMLSSQGSAS*
Ga0099827_100520455	3300009090	Vadose Zone Soil	VPFGDLTYSNSEIAFIFFMFHEGARAMVELANTLRNQHGGEIAIADLLNRGIEERMLGSQGSAS*
Ga0099827_100606673	3300009090	Vadose Zone Soil	MSFGDFTHGNGEMAFVFITFHEGWGAVVKLTNTFCNEHGRKIAIADFLNSGIEECMLGSQGSAS*
Ga0111539_102147953	3300009094	Populus Rhizosphere	MSLGDFPYSNGEMALIAFVFHQGRRAVIELANTLCNEHGGEITITDSLNSGIEERMLGSQGSAS*
Ga0111539_103071362	3300009094	Populus Rhizosphere	MSLGDFTHSNGEMALIAVMLHQGWGAMIELANTLRNEHGGEIAITDFLNSGIEERMLSSQGSAS*
Ga0111539_132216721	3300009094	Populus Rhizosphere	MSLSDFTHSNGEMALIAFILHQGRGAVIELTDTLCNEHGGEIAITNFLNSGIEERMLGSQGSAS*
Ga0075418_103417132	3300009100	Populus Rhizosphere	MSLGDFTHSNGEMALIAVMLHQGWGAMIELTNTLRNEHGGEIAITDFLNSGIEERMLSSQGSAS*
Ga0075418_104559672	3300009100	Populus Rhizosphere	MSLGDFPYSNGEMALIAFVFHQGRRAVIELANTLCNEHGGEITITDFLNSGIEERMLGSQGSAS*
Ga0066709_1000464224	3300009137	Grasslands Soil	VPFGDLTYSNSEIAFIFFMFHERARAMVELANTLRNQHGGEIAIADLLNRGIEERMLGSQGSAS*
Ga0066709_1000743823	3300009137	Grasslands Soil	MSFGDFTHSNGKMTLVFITFHEGWGAVVKLTNTFCNEHGRKIAIADFLNSGIEECMLGSQGSAS*
Ga0066709_1011708962	3300009137	Grasslands Soil	MSLGDFTHSNGEMALIDVMLHQGWGAMIELANTLRNKHGGEIAIADFLNRGIEERVLSSQGSAS*
Ga0114129_100290433	3300009147	Populus Rhizosphere	MSLGNFTHSNGEMALIAIMLHQGRGTVIELTNTLRNEHGAEIAITDFLNSGIEERMLSSQGSAS*
Ga0114945_100546932	3300009444	Thermal Springs	VPFGDLTHRNSEMAFMFFMVHEGGGAMVELANTLRNQHGGEIAIADLLNRGIEERMLGSQSSVS*
Ga0114945_106203061	3300009444	Thermal Springs	MSLGDLTHSYSKMAFVFFSFHEGRGAVVELANTLRNQHGGEIAIADFLNSGIEERMLGSQSSAS*
Ga0105249_124474131	3300009553	Switchgrass Rhizosphere	MSLGDFPHSNGEMALIAFVFYQGRCAVIELANTLRNEHRGEIAITDFLNSGIEERMLSSQGSAS*
Ga0114944_10570052	3300009691	Thermal Springs	MSLGDLTHSYSKMAFVFFSFHEGRGAVVELANTLRNQHGGEIAIADFFNSGIEERMLGSQSSAS*
Ga0126374_114456531	3300009792	Tropical Forest Soil	MSLGDFPHSNGEMALIAFVFHQGRCAVIELTNTLRNEHRGEITITDFLNSGIEERML
Ga0105073_10533392	3300009802	Groundwater Sand	VPFGDLTHGNREMAFIFFILDEGARAMVELANTLRNQHGGDIAIADFLNSGIEECMLGSQGSAS*
Ga0105082_10402381	3300009814	Groundwater Sand	MSFGDFTHGNGEMALVFITCHEGWGAVVELTNTFCNEHGRKIAIADFLNSGIEECMLG
Ga0105070_11295591	3300009815	Groundwater Sand	MSFGDFTHGNGEMALVFITCHEGWGAVVELTNTFCNEHGRKIAIADFLNSGIEECMLGSQGSAS*
Ga0105062_11257442	3300009817	Groundwater Sand	MSFGDFTHGNGEMALVFITFHEGWGAVVELTNTFRNKHGRKIAIADFLNSGIEECMLGSQGSAS*
Ga0105068_11024621	3300009836	Groundwater Sand	THGNGEMALVFITFHEGWGAVIELTNTFRNKHGRKIAIADFLNSGIEECMLGSQGSAS*
Ga0126314_114078582	3300010042	Serpentine Soil	DFTHSDGEMALIAVILHQGWGAMIELTNTLRNEHGGEIAITDFLDSGIEERMLSSQGSAS
Ga0126380_121088872	3300010043	Tropical Forest Soil	MSLGDFPHSNGEMALIAFVFHQGRRTVIELANTLRNEHGGEIAITDLLNSGIEERMLSSQGSAS*
Ga0126384_111672711	3300010046	Tropical Forest Soil	VSFGDFTHSNSEMAFILFMFYEGRGAVVELANTLRNQHGGEIAIADLLNRGIEERMLGSQGSAS*
Ga0126382_102031672	3300010047	Tropical Forest Soil	MSFSDFTHGNGEMAFVFIILHEGWRAVVELTNALRNEHGRKIAIANFLNSGIEECMLGSQGSAS*
Ga0126382_108943691	3300010047	Tropical Forest Soil	MSLGDFTHSNGEMALIAVILHQGRRAVIELANTLRNEHGGEIAITDFLNSGIEERMLSSQGSAS*
Ga0127462_1611581	3300010061	Grasslands Soil	MSLGDFTHSNGEMALIDVMLHQGWGAMIELANTLRNKHGGEIAIADFLNRGIEERVLSSQGSSS*
Ga0127426_1387211	3300010062	Grasslands Soil	MSLGDFTHSNGEMALIDVMLHQGWGAMIELANTLRNKHGGEIAIADFLNSGIEERMLSSQGSAS*
Ga0127432_1454681	3300010067	Grasslands Soil	MSLGDFTHSNGEMALINVILHQSRGAMIELANTLRNEHGGEVAIADFLNCGIEERVLSSQGSAS*
Ga0127442_1208161	3300010068	Grasslands Soil	MSLGDFTHSNGEMALINVILHQGRGAMIELANTLRNEHGGEVAIADFLNSGIEERVLSSQGSAS*
Ga0127457_10251041	3300010081	Grasslands Soil	MPFGDFTYGNGEMAFLFITFHEGWGAVVKLTNTFCNEHGRKIAIADFLNSGIEECMLGSQGSAS*
Ga0127440_10491443	3300010100	Grasslands Soil	MSFGDFTHSNGKMTLVFITFHEGWRTVVELTNTLCNEHGRKIAITDFLNSGIEERMLGSQGSAS*
Ga0127458_10236231	3300010112	Grasslands Soil	MSLGDFTHGNGEMAFIAVMLHQGRRAVIELADTLRNEHGGEIAITDFLNSGIKERMLGSQGLAS*
Ga0127495_11386171	3300010115	Grasslands Soil	MSLGDFTHSNGEMALIDVMLHQGRGAMIELANTLRNEHGGEIAIADFLNSGIEERVLSSQGS
Ga0127443_11148981	3300010125	Grasslands Soil	MSFGDFTHSNGKMTLVFITFHEGWGAVVKLTNTFCNEHGRKIAIADFLNSGIEECMLGSQ
Ga0127455_10685512	3300010132	Grasslands Soil	MSLGDFTHSNGEMALIDVMLHQGRGAMIELANTLRNEHGGEIAITDFLNSGIEERMLSSQGSAS*
Ga0127464_11401651	3300010139	Grasslands Soil	MSLGDFTHSNGEMALIAVILHQGRGAMIELADTLCNEHSGEIAIADFLNSGIEERMLSSQGSAS*
Ga0126321_12146101	3300010145	Soil	MSLGDFTHSNGEMALIAVMLHQGWSAVIELANTLRNEHGGEIAITDLLNSGIEERMLSSQGSAS*
Ga0126321_12475022	3300010145	Soil	MSLGDFTHSNGEMALIAVMLHQGWGAVIELANTLRNEHGGEIAITDFLNSGIEERMLSSQGSAS*
Ga0126321_14976871	3300010145	Soil	MSLGDFPHSNGEMALIAFVFHQGRRAVIELANTLRNEHGGEIAITDFLNSGIEERMLSSQGSAS*
Ga0134082_103385942	3300010303	Grasslands Soil	MSLGDFTHSNGEMALINVILHQGRGAMIELANTLRNKHGGEIAIADFLNRGIEERVLSSQGSAS*
Ga0126370_115046251	3300010358	Tropical Forest Soil	MSLGNFTHSNSEMALIAVILYQGRGAVIQLANTLCNEHSGEITITDFLNSGIEERMLSSQGSA
Ga0126376_106581672	3300010359	Tropical Forest Soil	VSFGDFTHSNSEMAFILFMFYEGRGAVVELANTLRNQHGGEIAIADFLNRGIEERMLGSQGSAS*
Ga0126378_112246552	3300010361	Tropical Forest Soil	VPFGDLTHGNSKKTFIFFIVNEGARAMVELANTLRNQHGGEITIADSLNRGIEERMLGSQGSAS*
Ga0126377_107544071	3300010362	Tropical Forest Soil	MSLGDFPHSNGEMALIAFMFHQGRRAMIELANTLRNEHRGEIAITDFLNSGIEERMLGSQGSAS*
Ga0126377_134601471	3300010362	Tropical Forest Soil	THGNSKIAFIFFIVNEGARAMVELANTLRNQHGGEITIADSLNRGIEERMLGSQGSAS*
Ga0126379_133086252	3300010366	Tropical Forest Soil	GNSEIAFIFVTFHEGACAMGELANTFRNQHGGEIAIADLLNRGIEERMLGSQGSAS*
Ga0138111_10433171	3300010896	Grasslands Soil	MSFGDFTYGNGEMAFLFITFHEGWGAVVKLTNTFCNEHGRKIAIADFLNSGIEECMLGSQGSAS*
Ga0137393_102554181	3300011271	Vadose Zone Soil	MSLGDFTHSDGEMALIAVVRHEGRRAVIELANTLCNEHGGEITITDLLNSGIEER
Ga0137428_10143332	3300011432	Soil	MSLSDFTHSNGEMALIAFILYQGRGAVIELTDTLCNEHGGEIAITNLLNSGIEERMLGSQGSAS*
Ga0137452_12440841	3300011441	Soil	MSLSDFTHSNGEMALIDFILHQGRGAVIELTDTLCNEHGGEIAIPNFLNSGIEERMLGSQGSAS*
Ga0137427_104527081	3300011445	Soil	MSLSDFTHRNGEMALIAFILYQGRGAVIELTDTLCNEHGGEIAITNLLNSGIEERMLGSQGSAS*
Ga0137389_103095202	3300012096	Vadose Zone Soil	MFLGDFTHSNGGMALIAVMLHHGRRVVIELANTLRNEHSGEIAITNFLNSGIEERMLSSQGSAS*
Ga0137388_108142102	3300012189	Vadose Zone Soil	MSFGDFTHGNGEMAFLFITFHEGWGAVVKLTNTFCNEHGRKIAIADFLNSGIEECMLGSQGSAS*
Ga0137383_100404224	3300012199	Vadose Zone Soil	MSLGDFTHSNGEMALIDVMLHQGRGAMIELANTLRNEHGGEIAIADFLNSGIEERVLSSQGSAS*
Ga0137365_102003672	3300012201	Vadose Zone Soil	MSFGDFTHSNGEMALVFITFHEGWGAVVKLTNTFCNEHGRKIAITDFLNSGIEECMLGSQGSAS*
Ga0137363_102399582	3300012202	Vadose Zone Soil	MSFGDFTHRNGEMAFVFVTFHKGGRTVVELANALRNEHGRKIAIANFFNSGIKECMLSSQGSAS*
Ga0137374_100353954	3300012204	Vadose Zone Soil	MSFGDFTHSNGEMALVFITLHEGWCAVVELTNTLCNEHGRKIAITDFLNSGIEECMLGSQGSAS*
Ga0137380_101878931	3300012206	Vadose Zone Soil	MSLGDFTHSNGEMALINVILHQGRGAMIELANTLCNEHGGEIAIADLLNSGIEERVLSSQGSAS*
Ga0137380_107197671	3300012206	Vadose Zone Soil	MSLGDFTHGNGEMALIDVMLYQGRGAMIELANTLRNEHGGEIAIADFLNSGIEERVLSSQGSAS*
Ga0137378_100428553	3300012210	Vadose Zone Soil	MSLGDFTHGNGEMALIDVMLHQGRGAMIELANTLRNEHGGEIAIADFLNSGIEERVLSSQGSAS*
Ga0150985_1173092781	3300012212	Avena Fatua Rhizosphere	MSLGDFTHSNGEMALIAVVLHQGRRAMIELADTLCNEHSGEIAIADFLNSGIEERMLSSQGSAS*
Ga0150985_1227254701	3300012212	Avena Fatua Rhizosphere	VPFGDFTHSNSEMAFILFRFYEGGRAVVELANTLRNQHGGEIAIADFLNCGIEERMLGSQGSAS*
Ga0137371_110873382	3300012356	Vadose Zone Soil	MSLGDFTHSNGEMALIDVMLHQGWGAMIELANTLRNKHGGEIAIADFLNSGIEERVLSSQGSAS*
Ga0137368_101654722	3300012358	Vadose Zone Soil	MPFGDFTYGNGEMAFLFIIFHEGWGAVVKLTNTFCNEHGRKIAIADFLNSGIEECMLGSQGSAS*
Ga0137385_105877662	3300012359	Vadose Zone Soil	MSFGDFTHSNGEMALVFIILHEGWCAVVELTNTLCNEHGRKIAITDFLNSGIEECMLGSQGSAS*
Ga0137360_100960693	3300012361	Vadose Zone Soil	MPFGDFTHGNGEMAFLFITFHEGWGAVVKLTNTFCNEHGRKIAIADFLNSGIEECMLGSQGSAS*
Ga0137361_111772741	3300012362	Vadose Zone Soil	GRGTSYRRFYGEMSFGDFTHRNGEMAFVFVTFHKGGRTVVELANALRNEHGRKIAIANFFNSGIKECMLSSQGSAS*
Ga0134037_10199482	3300012372	Grasslands Soil	MSLGDFTHSNGEMALIDVMLHQGRGAMIELANTLRNKHGGEIAIADFLNRGIEERVLSSQGSAS*
Ga0134042_10363781	3300012373	Grasslands Soil	MSLGDFTHSNGEMALIAVILNQGRGAMIELADTLCNEHSGEIAIADLLNSGIEERMLSSQGSAS*
Ga0134039_12628871	3300012374	Grasslands Soil	MSFGDFTHSNGEMALVFITFHEGWRTVVELTNTLCNEHGRKIAITDFLNSGIEERMLGSQGSAS*
Ga0134034_11329332	3300012375	Grasslands Soil	MSLGDFTHSNGEMALIAVILHQGRGAMIELADTLGNEHSSEIAIADLLNSGIEERMLSSQGSAS*
Ga0134058_12339201	3300012379	Grasslands Soil	MPFGDFTYGNGEMAFLFIRFHEGWGAVVKLTNTFCNEHGRKIAIADFLNSGIEECMLGSQGSAS*
Ga0134038_10691701	3300012382	Grasslands Soil	MSLGDFTHSNGEMALIAVILHQGRGAMIELADTLCNEHSGEIAIADLLNSGIEERMLSSQGSAS
Ga0134035_12159361	3300012391	Grasslands Soil	VPFGDFTHSNSEMAFILFMFYEGGRAMVELANTLRNQHSGEIAIADFLNRGIEERMLGSQGSAS*
Ga0134043_10519181	3300012392	Grasslands Soil	MSLGDFTHSNGEMALIDVMLHQGWGAMIELANTLRNKHGGEIAIADFLNRGIEERVLSSQGSAS
Ga0134043_13264641	3300012392	Grasslands Soil	MPFGDFTYGNGEMAFLFITFHEGWGAVVKLTNTFCNEHGRKIAIADFLN
Ga0134057_11170661	3300012396	Grasslands Soil	MSFGDFTHSNGKMTLVFITFHEGWGAVVKLTNTFCNEHGRKIAIADF
Ga0134048_11605111	3300012400	Grasslands Soil	MSFGDFTHSNGKMTLVFITFHEGWGAVVKLTNTFCNEHGRKIAIADFLNSGIEE
Ga0134049_13875431	3300012403	Grasslands Soil	MSLGDFTHSNGEMALIDVMLHQGWGAMIELANTLRNKHGSEIAIADFLNSGIEERVLSSQGSAS*
Ga0134053_12017281	3300012406	Grasslands Soil	MSFGDFTHSNGKMTLVFITFHEGWGAVVKLTNTFCNEHGRKIAIAD
Ga0134050_14453771	3300012407	Grasslands Soil	MPFGDFTYGNGEMAFLFITFHEGWGAVVKLTNTFCNEHGRKIAIANFLNSGIEECMLGSQGSAS*
Ga0150984_1063174232	3300012469	Avena Fatua Rhizosphere	MSLGDFTHGDGEMALIAVILHQGWGAMIELTNTLRNEHGGEIAITDFLNSGIEERMLSSQGSAS*
Ga0137373_101489573	3300012532	Vadose Zone Soil	MPFGDFTYGNGEMAFLFITFHEGWGAVVKLTNTFCNEHGRKIAITDFLNSGIEECMLGSQGSAS*
Ga0126375_104735412	3300012948	Tropical Forest Soil	MSLGDFPHSNGEMALIAFVFHQGRRTVIELANTLRNEHGGEIAIPDFLNSGIEERMLSSQGSAS*
Ga0126369_100764093	3300012971	Tropical Forest Soil	VSFGDFTHSNSEMAFILFMFYEGRGAVVELANTLRNQHGGEITIADSLNRGIEERMLGSQGSAS*
Ga0163162_102944512	3300013306	Switchgrass Rhizosphere	MSLGDFTHSNGEMALIAFVLNQGRRAMIELANTLRNEHGGEIAITDSLNSGIEERMLSSQGSAS*
Ga0182001_100826742	3300014488	Soil	MSLGDFTHSNGEMALIAVMLHQGRGAVIELANTLRNEHGGEIAIPDFLNSGIEERMLSSQSSAS*
Ga0157379_126151911	3300014968	Switchgrass Rhizosphere	CGWGTPYHRLYVQMSLGDFTHSNGEMALIAFVLNQGRRAMIELANTLRNEHGGEIAITDSLNSGIEERMLSSQGSAS*
Ga0137409_107508971	3300015245	Vadose Zone Soil	MSLSDFTHSNGEMALIDFILYQGRGAVIELTDTLCNEHGGEIAITDFLNSGIEERML
Ga0132258_1000183622	3300015371	Arabidopsis Rhizosphere	MSLGDFPHRNGEMALIAVVFHEGRRTVIELANTLRNEHSGEITITDFLNSGIEERMLSSQGSAS*
Ga0132258_107052113	3300015371	Arabidopsis Rhizosphere	MSLGDFTHSNGEMALIAFVLNQGRRAVIELANTLRNEHGGEIAITDSLNSGIEERMLSSQGSAS*
Ga0308206_11327631	3300030903	Soil	MSLGDFTYSNGEMAFIFIIVHEGGRTMVELANTLRNKHGGKITIADSLNRGIEERMLVSQGSAS
Ga0370545_041564_42_236	3300034643	Soil	MSLGDFTHSDGEMALIAVVLHQGRGAVIELANTLRNEHGGEITITDFLNSGIEKRMLSSQGSAS
Ga0370545_105385_384_578	3300034643	Soil	MSLSDFTHSNGEMALIAFILHQGRGAVIELTDTLRNEHGGEIAITDFLNSGIEERMLGSQGSAS
Ga0370548_113309_40_234	3300034644	Soil	MSFGDFTHSNGEMAFVFIIFHEGWRAVVELTNTLRNEHGRKIAIANFLNSGIEECMLGSQGSAS
Ga0314780_198233_281_475	3300034659	Soil	MSLGDFPYSNGEMALIAFVFHQGRRAVIELANTLCNEHGGEITITDSLNSGIEERMLGSQGSAS
Ga0314783_058185_356_550	3300034662	Soil	MSLSDFTHSNGEMALIAFILHQGRGAVIELTDTLCNEHGGEIAITNFLNSGIEERMLGSQGSAS
Ga0314788_149373_336_530	3300034666	Soil	MSLGDFPYSNGEMALIAFVFHQGRRAVIELANTLCNEHGGEITITDFLNSGIEERMLGSQGSAS
Ga0314792_023567_870_1064	3300034667	Soil	MSLSDFTHSNGEMALIAFILYQGRGAVIELTDTLCNEHGGEIAITNFLNSGIEERMLGSQGSAS
Ga0370541_055224_188_382	3300034680	Soil	MSFGDFTHSNGKMALVFITFHEGWGAVVKLTNTFCNEHGRKIAIADFLNSGIEECMLGSQGSAS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F093334

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences