Metagenome Family F093317

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F093317
Family Type	Metagenome
Number of Sequences	106
Average Sequence Length	38 residues
Representative Sequence	MMIMIMKTPGSQVDSPVAEGNRKEGGGRKMRDLHKDT
Number of Associated Samples	18
Number of Associated Scaffolds	106

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	78.30 %
% of genes near scaffold ends (potentially truncated)	43.40 %
% of genes from short scaffolds (< 2000 bps)	66.04 %
Associated GOLD sequencing projects	10
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.14

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (94.340 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Ice → Glacial Lake → Freshwater (85.849 % of family members)
Environment Ontology (ENVO)	Unclassified (85.849 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (85.849 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 0.00% Coil/Unstructured: 100.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.14
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.14
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF01753	zf-MYND	0.94
PF02493	MORN	0.94
PF02460	Patched	0.94
PF03988	DUF347	0.94
PF00075	RNase_H	0.94
PF11999	Ice_binding	0.94
PF07727	RVT_2	0.94
PF04277	OAD_gamma	0.94

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG1033	Predicted exporter protein, RND superfamily	General function prediction only [R]	0.94
COG2849	Antitoxin component YwqK of the YwqJK toxin-antitoxin module	Defense mechanisms [V]	0.94
COG3630	Na+-transporting oxaloacetate/methylmalonyl-CoA decarboxylase, gamma subunit	Energy production and conversion [C]	0.94
COG4642	Uncharacterized conserved protein	Function unknown [S]	0.94
COG4705	Uncharacterized membrane-anchored protein	Function unknown [S]	0.94

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.34 %
All Organisms	root	All Organisms	5.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.34 %
cellular organisms	root	All Organisms → cellular organisms	4.72 %
Viruses	superkingdom	All Organisms → Viruses	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.34 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	3.77 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.94 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.34 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	0.94 %
Viridiplantae	kingdom	All Organisms → cellular organisms → Eukaryota → Viridiplantae	0.94 %
Cryptophyceae	class	All Organisms → cellular organisms → Eukaryota → Cryptophyceae	0.94 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.34 %
bacterium TMED181	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED181	0.94 %
Chlorophyta	phylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta	0.94 %
Cryptophyceae	class	All Organisms → cellular organisms → Eukaryota → Cryptophyceae	0.94 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.34 %
core chlorophytes	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes	0.94 %
bacterium TMED181	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED181	0.94 %
Cryptophyceae	class	All Organisms → cellular organisms → Eukaryota → Cryptophyceae	0.94 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.34 %
Chlorophyceae	class	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes → Chlorophyceae	0.94 %
bacterium TMED181	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED181	0.94 %
Cryptophyceae	class	All Organisms → cellular organisms → Eukaryota → Cryptophyceae	0.94 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.34 %
CS clade	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes → Chlorophyceae → CS clade	0.94 %
bacterium TMED181	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED181	0.94 %
Cryptophyceae	class	All Organisms → cellular organisms → Eukaryota → Cryptophyceae	0.94 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.34 %
Chlamydomonadales	order	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes → Chlorophyceae → CS clade → Chlamydomonadales	0.94 %
bacterium TMED181	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED181	0.94 %
Cryptophyceae	class	All Organisms → cellular organisms → Eukaryota → Cryptophyceae	0.94 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.34 %
Chlamydomonadaceae	family	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes → Chlorophyceae → CS clade → Chlamydomonadales → Chlamydomonadaceae	0.94 %
bacterium TMED181	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED181	0.94 %
Cryptophyceae	class	All Organisms → cellular organisms → Eukaryota → Cryptophyceae	0.94 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.34 %
Chlamydomonas	genus	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes → Chlorophyceae → CS clade → Chlamydomonadales → Chlamydomonadaceae → Chlamydomonas	0.94 %
bacterium TMED181	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED181	0.94 %
Cryptophyceae	class	All Organisms → cellular organisms → Eukaryota → Cryptophyceae	0.94 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.94 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300007516\|Ga0105050_10061522	Not Available	2641	Open in IMG/M
3300007516\|Ga0105050_10105046	Not Available	1858	Open in IMG/M
3300007516\|Ga0105050_10504459	Not Available	714	Open in IMG/M
3300007519\|Ga0105055_10041246	Not Available	5019	Open in IMG/M
3300007519\|Ga0105055_10047820	Not Available	4621	Open in IMG/M
3300007519\|Ga0105055_10057318	Not Available	4169	Open in IMG/M
3300007519\|Ga0105055_10076854	Not Available	3524	Open in IMG/M
3300007519\|Ga0105055_10078830	Not Available	3474	Open in IMG/M
3300007519\|Ga0105055_10081076	Not Available	3416	Open in IMG/M
3300007519\|Ga0105055_10092509	Not Available	3166	Open in IMG/M
3300007519\|Ga0105055_10213813	Not Available	1880	Open in IMG/M
3300007519\|Ga0105055_10233567	Not Available	1771	Open in IMG/M
3300007519\|Ga0105055_10240306	Not Available	1736	Open in IMG/M
3300007519\|Ga0105055_10392091	Not Available	1222	Open in IMG/M
3300007519\|Ga0105055_10584242	Not Available	904	Open in IMG/M
3300007519\|Ga0105055_10587602	Not Available	900	Open in IMG/M
3300007519\|Ga0105055_10596071	Not Available	891	Open in IMG/M
3300007519\|Ga0105055_10779742	Not Available	727	Open in IMG/M
3300007519\|Ga0105055_10918350	Not Available	644	Open in IMG/M
3300007519\|Ga0105055_11267039	Not Available	512	Open in IMG/M
3300007520\|Ga0105054_10062924	Not Available	3899	Open in IMG/M
3300007520\|Ga0105054_10106380	Not Available	2865	Open in IMG/M
3300007520\|Ga0105054_10130844	Not Available	2529	Open in IMG/M
3300007520\|Ga0105054_10325823	Not Available	1369	Open in IMG/M
3300007520\|Ga0105054_10641003	Not Available	814	Open in IMG/M
3300007520\|Ga0105054_10742325	Not Available	727	Open in IMG/M
3300007520\|Ga0105054_11099967	Not Available	543	Open in IMG/M
3300007522\|Ga0105053_10044553	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes → Chlorophyceae → CS clade → Chlamydomonadales → Chlamydomonadaceae → Chlamydomonas	4707	Open in IMG/M
3300007522\|Ga0105053_10057342	Not Available	4076	Open in IMG/M
3300007522\|Ga0105053_10090925	Not Available	3129	Open in IMG/M
3300007522\|Ga0105053_10101757	Not Available	2929	Open in IMG/M
3300007522\|Ga0105053_10114742	Not Available	2730	Open in IMG/M
3300007522\|Ga0105053_10127677	Not Available	2559	Open in IMG/M
3300007522\|Ga0105053_10655729	Not Available	804	Open in IMG/M
3300007522\|Ga0105053_10860132	Not Available	654	Open in IMG/M
3300007523\|Ga0105052_10101108	Not Available	1982	Open in IMG/M
3300007523\|Ga0105052_10181517	Not Available	1424	Open in IMG/M
3300007523\|Ga0105052_10417305	Not Available	877	Open in IMG/M
3300007523\|Ga0105052_10617733	Not Available	693	Open in IMG/M
3300007722\|Ga0105051_10048726	Not Available	3413	Open in IMG/M
3300007722\|Ga0105051_10079820	Not Available	2580	Open in IMG/M
3300007722\|Ga0105051_10246376	Not Available	1358	Open in IMG/M
3300007722\|Ga0105051_10673529	Not Available	756	Open in IMG/M
3300007722\|Ga0105051_10908251	Not Available	634	Open in IMG/M
3300007722\|Ga0105051_11241091	Not Available	528	Open in IMG/M
3300007722\|Ga0105051_11278617	Not Available	519	Open in IMG/M
3300011188\|Ga0136587_1036516	All Organisms → Viruses → Predicted Viral	1194	Open in IMG/M
3300011188\|Ga0136587_1081328	Not Available	804	Open in IMG/M
3300011188\|Ga0136587_1204884	Not Available	517	Open in IMG/M
3300011188\|Ga0136587_1212752	Not Available	508	Open in IMG/M
3300012037\|Ga0136559_1052101	Not Available	1060	Open in IMG/M
3300012037\|Ga0136559_1161070	Not Available	617	Open in IMG/M
3300012037\|Ga0136559_1167337	Not Available	606	Open in IMG/M
3300012269\|Ga0136560_1095592	Not Available	531	Open in IMG/M
3300012272\|Ga0136586_1058444	Not Available	883	Open in IMG/M
3300012272\|Ga0136586_1068455	Not Available	821	Open in IMG/M
3300012272\|Ga0136586_1142343	Not Available	586	Open in IMG/M
3300012272\|Ga0136586_1142433	Not Available	586	Open in IMG/M
3300027832\|Ga0209491_10020193	Not Available	7159	Open in IMG/M
3300027832\|Ga0209491_10020328	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED181	7131	Open in IMG/M
3300027832\|Ga0209491_10061556	Not Available	3706	Open in IMG/M
3300027832\|Ga0209491_10086267	Not Available	3021	Open in IMG/M
3300027832\|Ga0209491_10108932	Not Available	2605	Open in IMG/M
3300027832\|Ga0209491_10116535	Not Available	2494	Open in IMG/M
3300027832\|Ga0209491_10162602	Not Available	1989	Open in IMG/M
3300027832\|Ga0209491_10187070	Not Available	1800	Open in IMG/M
3300027832\|Ga0209491_10344208	Not Available	1110	Open in IMG/M
3300027848\|Ga0209390_10029069	Not Available	5668	Open in IMG/M
3300027848\|Ga0209390_10132816	Not Available	2289	Open in IMG/M
3300027848\|Ga0209390_10136141	Not Available	2251	Open in IMG/M
3300027848\|Ga0209390_10180403	All Organisms → cellular organisms → Eukaryota → Cryptophyceae	1856	Open in IMG/M
3300027848\|Ga0209390_10192776	All Organisms → cellular organisms → Eukaryota	1770	Open in IMG/M
3300027848\|Ga0209390_10203054	Not Available	1705	Open in IMG/M
3300027848\|Ga0209390_10213012	Not Available	1646	Open in IMG/M
3300027848\|Ga0209390_10269102	Not Available	1376	Open in IMG/M
3300027848\|Ga0209390_10289509	Not Available	1298	Open in IMG/M
3300027848\|Ga0209390_10342539	Not Available	1130	Open in IMG/M
3300027848\|Ga0209390_10461134	All Organisms → cellular organisms → Eukaryota	874	Open in IMG/M
3300027976\|Ga0209702_10206505	Not Available	834	Open in IMG/M
3300027983\|Ga0209284_10065520	Not Available	1969	Open in IMG/M
3300027983\|Ga0209284_10118180	Not Available	1403	Open in IMG/M
3300027983\|Ga0209284_10371547	Not Available	710	Open in IMG/M
3300027983\|Ga0209284_10480305	Not Available	600	Open in IMG/M
3300027983\|Ga0209284_10489895	Not Available	592	Open in IMG/M
3300027983\|Ga0209284_10512250	Not Available	574	Open in IMG/M
3300027983\|Ga0209284_10518956	Not Available	569	Open in IMG/M
3300027983\|Ga0209284_10576897	Not Available	529	Open in IMG/M
3300028369\|Ga0306896_1045477	Not Available	676	Open in IMG/M
3300028369\|Ga0306896_1048792	Not Available	653	Open in IMG/M
3300028413\|Ga0306870_1019137	Not Available	1241	Open in IMG/M
3300032435\|Ga0335398_10025249	Not Available	6235	Open in IMG/M
3300032435\|Ga0335398_10032918	Not Available	5381	Open in IMG/M
3300032435\|Ga0335398_10037359	Not Available	4998	Open in IMG/M
3300032435\|Ga0335398_10045403	Not Available	4490	Open in IMG/M
3300032435\|Ga0335398_10078709	Not Available	3294	Open in IMG/M
3300032435\|Ga0335398_10085695	Not Available	3134	Open in IMG/M
3300032435\|Ga0335398_10105528	Not Available	2766	Open in IMG/M
3300032435\|Ga0335398_10216549	Not Available	1728	Open in IMG/M
3300032435\|Ga0335398_10233619	Not Available	1636	Open in IMG/M
3300032435\|Ga0335398_10313290	Not Available	1312	Open in IMG/M
3300032435\|Ga0335398_10316085	Not Available	1303	Open in IMG/M
3300032462\|Ga0335396_10025004	Not Available	4325	Open in IMG/M
3300032462\|Ga0335396_10245492	Not Available	1173	Open in IMG/M
3300032462\|Ga0335396_10322293	Not Available	1006	Open in IMG/M
3300032462\|Ga0335396_10486042	Not Available	785	Open in IMG/M
3300032462\|Ga0335396_10723259	Not Available	607	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	85.85%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	14.15%

Habitat	Taxonomy	Distribution
Ice	Environmental → Aquatic → Freshwater → Ice	85.85%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	14.15%

Habitat	Taxonomy	Distribution
Glacial Lake	Environmental → Aquatic → Freshwater → Ice → Glacial Lake	85.85%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	14.15%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater → Ice → Glacial Lake → Freshwater	85.85%
Saline Lake	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Lake	14.15%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300007516	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - FRY-01	Environmental	Open in IMG/M
3300007519	Freshwater microbial communities from Lake Bonney liftoff mats and glacier meltwater in Antarctica - BON-03	Environmental	Open in IMG/M
3300007520	Freshwater microbial communities from Lake Bonney liftoff mats and glacier meltwater in Antarctica - BON-02 (megahit assembly)	Environmental	Open in IMG/M
3300007522	Freshwater microbial communities from Lake Bonney liftoff mats and glacier meltwater in Antarctica - BON-01	Environmental	Open in IMG/M
3300007523	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - FRY-03	Environmental	Open in IMG/M
3300007722	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - FRY-02 (megahit assembly)	Environmental	Open in IMG/M
3300011188	Saline lake microbial communities from Rauer Islands, Antarctica - Metagenome Filla 1 #563	Environmental	Open in IMG/M
3300012037	Saline lake microbial communities from Rauer Islands, Antarctica - Metagenome Hop E1 #496	Environmental	Open in IMG/M
3300012269	Saline lake microbial communities from Rauer Islands, Antarctica - Metagenome Hop E1 #497	Environmental	Open in IMG/M
3300012272	Saline lake microbial communities from Rauer Islands, Antarctica - Metagenome Filla 1 #562	Environmental	Open in IMG/M
3300027832	Freshwater microbial communities from Lake Bonney liftoff mats and glacier meltwater in Antarctica - BON-02 (SPAdes)	Environmental	Open in IMG/M
3300027848	Freshwater microbial communities from Lake Bonney liftoff mats and glacier meltwater in Antarctica - BON-01 (SPAdes)	Environmental	Open in IMG/M
3300027976	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - FRY-01 (SPAdes)	Environmental	Open in IMG/M
3300027983	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - FRY-03 (SPAdes)	Environmental	Open in IMG/M
3300028369	Saline lake microbial communities from Rauer Islands, Antarctica - Metagenome Filla 1 #562 (v2)	Environmental	Open in IMG/M
3300028413	Saline lake microbial communities from Rauer Islands, Antarctica - Metagenome Hop E1 #496 (v2)	Environmental	Open in IMG/M
3300032435	Freshwater microbial communities from Lake Bonney liftoff mats and glacier meltwater in Antarctica - BON-03 (spades assembly)	Environmental	Open in IMG/M
3300032462	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - FRY-02 (spades assembly)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0105050_100615225	3300007516	Freshwater	MMIMIMKTPGPQVDSPVAEGNKREGGGRKMRDLHKDT*
Ga0105050_101050463	3300007516	Freshwater	MMIMIMKTPGSQVDFLIAEGNRKEGGGKMMRDLHIVTGDVS*
Ga0105050_105044592	3300007516	Freshwater	MMITIMKTSGSQVDSPVAEGKRKEGGGRKIRDLHRDT
Ga0105055_100412462	3300007519	Freshwater	MMIMIMKTPGSQVDSPVAEGNRKEGGGRKMRDLHKDT*
Ga0105055_100478205	3300007519	Freshwater	MMIMIMTTSGSQVDSPVAEGKRKEGGGRKIRDLHRDT*
Ga0105055_100573181	3300007519	Freshwater	MMIMIMKTSGSQVDPPVAERKRKEGGGRKIRDLHRDT*
Ga0105055_100768541	3300007519	Freshwater	MMIMIMKTSGSQVDSPVAEGNRKEGGGRKMRDLHKDT*
Ga0105055_100788302	3300007519	Freshwater	MMIMIMKTPGSQVDSPVAVDSPVAEGNRREGGEMRDLYKNI*
Ga0105055_100810765	3300007519	Freshwater	MIMIMKTPGSQVDSPVAEGNRKEGGGRKMSDLHKDT*
Ga0105055_100925091	3300007519	Freshwater	MMIMIVKAPGSQVDSPVAEGNKKEGGGRKMRDLHKDT*
Ga0105055_102138131	3300007519	Freshwater	MMMMIMKTPGSQVDSAVAEGNRKEGGGRKMRELHKNT*
Ga0105055_102335671	3300007519	Freshwater	MMIMIMKTSGFQVDSPVAEGNRKEGGGRKMRDLHKDTL*
Ga0105055_102403061	3300007519	Freshwater	MMIIYMKMMIDNETPGSQVDSTVAEGNRREGGGREMKDLHKDTH*
Ga0105055_103920911	3300007519	Freshwater	MTTTKKGKMMIMIMKTSGSQVDSPVAEGKRKEGGGRKIRDLHRDT
Ga0105055_105842421	3300007519	Freshwater	MIMIMKTPGSQVDFRIAEGNRKEGGGKMMRDLHIVTGDVS*
Ga0105055_105876021	3300007519	Freshwater	MMIMIMKTSGSQVDSPVAEGKRKEGGGRKIRDLHRDTW*
Ga0105055_105960711	3300007519	Freshwater	QKGKMMIMIMKTSGSQVDSPVAEGKRKEGGGRKIRDLHRDK*
Ga0105055_107797422	3300007519	Freshwater	MRMKTSGSQVDSPVAEGKRKEGGGRKIRDLHRDT*
Ga0105055_109183501	3300007519	Freshwater	MITKTSGSQVDSPVEEGNRKEGGGRKMKDLHKDT*
Ga0105055_112670392	3300007519	Freshwater	MMIMIMKTSGSQVDSPVAEGNRKEGGGRKMRDLLKDT*
Ga0105054_100629246	3300007520	Freshwater	MMIMIMKTPGSQVDSPVAVDSPVAEGNRREGGEMRDLHKNI*
Ga0105054_101063804	3300007520	Freshwater	MMIMIVKTHGSQVDSPVAEGNEKEGGGRKMRDLHKDTW*
Ga0105054_101308444	3300007520	Freshwater	MMIMIMKTPGSQVDSPVAEGNRKKGGERKMRDLHKDT*
Ga0105054_103258233	3300007520	Freshwater	KMMIMIMKTSGSQVDSPVAEGKRKEGGGRKIRDLHILSKP*
Ga0105054_106410032	3300007520	Freshwater	MIMKTLGFQVVSPVAEGNKKEGGGGKMRDLHKDT*
Ga0105054_107423252	3300007520	Freshwater	MGKIMIMILKTPGSQVDSPVAEGNRKEGGGRKMRDLHK
Ga0105054_110999672	3300007520	Freshwater	MMIMITKTFGSQVDSPVAEGKRKEGGGRKIRDLHK
Ga0105053_100445535	3300007522	Freshwater	MMIMIMKTFGSQVDSPVAEGKRKEGGGRKIRDLHRDT*
Ga0105053_100573425	3300007522	Freshwater	MMIMTVKSPGSQVGSPVAEGNKKEGGGRKMRNLHKDT*
Ga0105053_100909251	3300007522	Freshwater	HQKGKMMIMIMKTSGSQVDSPVAEGNRKEGGGRKMRDLHKDT*
Ga0105053_101017571	3300007522	Freshwater	MMIMIVKTPGSQVDSPVAEGKRKEGGGRKMRDLHKDT*
Ga0105053_101147421	3300007522	Freshwater	MMIMIMKTSGSQFDSPVAEGNRKEGGGRKMRDLHKDT*
Ga0105053_101276775	3300007522	Freshwater	MMIMIVKTPGSQVDSPVAEGKRRKGEGAEMRDLRKDT*
Ga0105053_106557292	3300007522	Freshwater	MMIMIMKTFGSQVDSPVAEGNRKEGGGRKMRDLHKDT*
Ga0105053_108601321	3300007522	Freshwater	MMILRMKTSGSQVDSPVAEGKRKEGGGRKIRDLHRDT
Ga0105052_101011082	3300007523	Freshwater	MMIMIMKTPGSQVDSPVAEGNRQEGGERKMRDLHKDT*
Ga0105052_101815171	3300007523	Freshwater	MMIMIMSTPGSQGDSPIAEGNRKEGGGRKMRDLHKET*
Ga0105052_104173051	3300007523	Freshwater	MMIMITKSSGPQVDSPVAEGKRKEGGGRKIRDLHKD
Ga0105052_106177333	3300007523	Freshwater	IMIMKTSGSQVDSPVAEGNRKEGGGRKMRDLHKDTQ*
Ga0105051_100487263	3300007722	Freshwater	MKIMIMKTSGSQVDSPVAEGNRKEGGGRKMRDLHKDTQ*
Ga0105051_100798201	3300007722	Freshwater	MIMIMKTPGSQVDSPVAEGNRKEGGGRQMRDLYKDT*
Ga0105051_102463762	3300007722	Freshwater	MMIMIMKKLGSQVDSPVAEGNRRKRGGREMRDLHKDTW*
Ga0105051_106735291	3300007722	Freshwater	GKMMIMIMKTPGSQVDSPVAVDSPVAEGNRREGGEMRDLHKNI*
Ga0105051_109082512	3300007722	Freshwater	MIMKTPGSQVDSPVAEGNRKEGGGRKMREVDKDTE*
Ga0105051_112410912	3300007722	Freshwater	MIMKTLGSQVVSPVAEGNKKEGGGRKMRDLHKDT*
Ga0105051_112786171	3300007722	Freshwater	MMIMILKTSGSQVDSPVAEGNRKEGGGRKRRDLHKDT*
Ga0136587_10365162	3300011188	Saline Lake	MIMKTSGSQVDSPVAEGKRKEGGGRKIRDLHRDT*
Ga0136587_10813282	3300011188	Saline Lake	MMIIIIKTLGSQVDSPVAEGNRKEGGARKMRDLHKDT
Ga0136587_12048841	3300011188	Saline Lake	MMIMIMKTPGSQVLSPVAEGNRKEGGGKKMRDLHKDT*
Ga0136587_12127522	3300011188	Saline Lake	MMIMIMKTSGSQVDSPVAEGNRKEGGGRKMRDLHK
Ga0136559_10521013	3300012037	Saline Lake	MMIMIVKTPGSQADYLVAEGNRRVEGGRKMRDRG*
Ga0136559_11610701	3300012037	Saline Lake	MIMKTPGSQVDSPVAEGNRKKGGERKMRDLHKDT*
Ga0136559_11673371	3300012037	Saline Lake	MMIMIMKTPGFQDDSPVAEEDRKEGGGENTKEGGGRKMRDLHKNT*
Ga0136560_10955921	3300012269	Saline Lake	MMIMIMKTSESQVDSPVAEGKRTEGGGRKITDLHRDT
Ga0136586_10584442	3300012272	Saline Lake	MIIVIMKTPGSQVDSPVAEGNRKEGGGRKMRDLHTDT*
Ga0136586_10684552	3300012272	Saline Lake	MMIMIVKISGSQVDSPVAEGNKKEGGGRKMRDLHKDT
Ga0136586_11423431	3300012272	Saline Lake	MTTTGKGKMMIMIMKTSGSQVDSPVAEGKRKEGGGRKIRDLHRDT
Ga0136586_11424332	3300012272	Saline Lake	MMIMIIKTPGSQVDSSVEEGNRKEGGGRKMKDLHKDT*
Ga0209491_100201931	3300027832	Freshwater	MIMIMKGPGSQVDSSVAEGNRKEGGGRKMRDLHKDT
Ga0209491_1002032811	3300027832	Freshwater	MMIMIMKTPGSQVDSPVAEGNRKKGGERKMRDLHKDT
Ga0209491_100615565	3300027832	Freshwater	KGKMMIMIMKTSGSQVDSPVAEGKRKEGGGRKIRDLHRDK
Ga0209491_100862671	3300027832	Freshwater	MMIMRMKTSGSQVDSPVAEGKRKEGGGRKIRDLHRDT
Ga0209491_101089321	3300027832	Freshwater	MMIMIVKTPGSQVDSPVAEGKRKEGGGRKMRDLHKDT
Ga0209491_101165351	3300027832	Freshwater	MMIMIMKTSGSQVDSPVAEGKRKEGGGRKIRDLHRDT
Ga0209491_101626021	3300027832	Freshwater	DSHQKGKMMIMIMKTSGSQVDSPVAEGNRKEGGGRKMRDLHKDT
Ga0209491_101870701	3300027832	Freshwater	MMIVIMKTSGSQVDSPVAEGNRKEGGGRKMRDLHKD
Ga0209491_103442084	3300027832	Freshwater	KMMIMIMKTSGSQVDSPVAEGKRKEGGGRKIRDLHILSKP
Ga0209390_100290692	3300027848	Freshwater	MMIMIMKTSGSQVDSPVAEGKKKEAGGRKIRDLHRDT
Ga0209390_101328161	3300027848	Freshwater	MMIMIMKTSGFQVDSPVAEGNRKEGGGRKMRDLHKD
Ga0209390_101361412	3300027848	Freshwater	MMIMIMKTPGSQVDSPVAVDSPVAEGNRREGGEMRDLHKNI
Ga0209390_101804035	3300027848	Freshwater	MMIMIMKTSGSQVDSPVAEGNRKEGGGRKMRDLHKDT
Ga0209390_101927765	3300027848	Freshwater	MMIMIMKTSGSQVDSPVAEGKRKEGGGRKIRDLHRD
Ga0209390_102030543	3300027848	Freshwater	MMIMIMKTPGSQVDSTVAEGNRREGEGRKMRDLHKDTWCQAMSVKK
Ga0209390_102130121	3300027848	Freshwater	MIMIVKTPGSQVDSPVAEGNKKEGGGRKMRDLHKDT
Ga0209390_102691023	3300027848	Freshwater	HQKGKMMIMIMKTSGSQVDSPVAEGNRKEGGGRKMRDLHKDT
Ga0209390_102895091	3300027848	Freshwater	MMIMIMKTSGSQVDSPVAEGNRKEGGGRKMRDLHKD
Ga0209390_103425392	3300027848	Freshwater	MMIIYMKMMIDNETPGSQVDSTVAEGNRREGGGREMKDLHKDTH
Ga0209390_104611341	3300027848	Freshwater	MIMIMKTSGSQVDSPVAEGNRKEGGGRKMRDLHKD
Ga0209702_102065052	3300027976	Freshwater	MMIMIMKTPEPQVDSPVAEGNRKEGGGRKMRDLHK
Ga0209284_100655201	3300027983	Freshwater	MMIMIMKTPGSQVDSPVAAGKLREGEEEMKDLHKDT
Ga0209284_101181803	3300027983	Freshwater	MMIMIMKTPGSQVDFLIAEGNRKEGGGKMMRDLHIVTGDVS
Ga0209284_103715471	3300027983	Freshwater	MMIMIMKTPGSQVDSPVAEGNRKEGGGRKMRDLYK
Ga0209284_104803051	3300027983	Freshwater	MIMMMIMKTPGSQDDSTVAEGNKKEGGGRKMRDLHKDT
Ga0209284_104898952	3300027983	Freshwater	MMIMIMKTPGSQVDSPVTEGNRKEGAGRKMTDYTKIHSN
Ga0209284_105122502	3300027983	Freshwater	MMIMIMKTPGSQVDSPVAEENRREGGGRDMRDLHN
Ga0209284_105189562	3300027983	Freshwater	MMIMIMKTPGFQVDSPVAEGNRKEGGGRKMRDLYKDT
Ga0209284_105768971	3300027983	Freshwater	KMMIMIMKTPGSQVDSPVAEGNRKEGGGRKMRDLHKDT
Ga0306896_10454771	3300028369	Saline Lake	MIMIMKTPGSQVDSPVAEGNRKEGGGRKMRDLHKDT
Ga0306896_10487921	3300028369	Saline Lake	MMIMILKTSGSQVDSPVAEGNRKEGGGRKMRDLHKN
Ga0306870_10191371	3300028413	Saline Lake	MMIMIMKTPGSQVDSPVAEGNRKEGGGRKMRDLHKD
Ga0335398_100252496	3300032435	Freshwater	MMIMIVKTPGSQVDSPVAEGNKKEGGGRKMRDLHKDT
Ga0335398_100329181	3300032435	Freshwater	MMIMIMKTSGSQVDPPVAERKRKEGGGRKIRDLHRDT
Ga0335398_100373598	3300032435	Freshwater	MMIMIMKTSGSQVDSPVAEGKRKKGAGRKIRDLHRDT
Ga0335398_100454031	3300032435	Freshwater	MMIMIMKTPGSQVDSLVAKGNRKEGGGRKMRDLHKDT
Ga0335398_100787091	3300032435	Freshwater	MMIMIMKTPGSQVDSPVAEGNRKEGGGRKMRDLHKDT
Ga0335398_100856952	3300032435	Freshwater	MMIMIVKTPGSQVDSPVADGNGWEGGGRGMKDLHKDT
Ga0335398_101055284	3300032435	Freshwater	MMIMIVKTHGSQVDSPVAEGNKKEGGGRKMRDLHKDTW
Ga0335398_102165493	3300032435	Freshwater	MIMKTSGFQVDSPVAEGNRKEGGGRKMRDLHKDTL
Ga0335398_102336192	3300032435	Freshwater	MMIMIMKTPGSQVDSPVAVDSPVAEGNRREGGEMRDLYKNI
Ga0335398_103132903	3300032435	Freshwater	KKMMIMIMKTPGSQFDSPVAEGNRKEGGGRKMRDLHKDT
Ga0335398_103160851	3300032435	Freshwater	MMIMIMKTFGSQVDSPVAEGNRKEGGGRKMRDLHK
Ga0335396_100250044	3300032462	Freshwater	MMSMILKTSGSQIDSPVAEGNRKEGGGRKMRDLHKDT
Ga0335396_102454922	3300032462	Freshwater	MMIMIMSTPGSQGDSPIAEGNRKEGGGRKMRDLHKET
Ga0335396_103222933	3300032462	Freshwater	MMIMIMKTPGSQVDSPVAEGNRQEGGERKMRDLHKDT
Ga0335396_104860421	3300032462	Freshwater	IMIMKTPGSQVDSPVAEGNRKEGGGRKMREVDKDTE
Ga0335396_107232591	3300032462	Freshwater	MMIMIMKTPGSQVDSPVAEGNRKEGGGRQMRDLYKDT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F093317

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences