Metagenome Family F093314

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F093314
Family Type	Metagenome
Number of Sequences	106
Average Sequence Length	57 residues
Representative Sequence	MAVSEDHASCWVHKDLTVTTKQIQALLTAARASGGKDECQVRLTGIEREYWMGTEIGRLG
Number of Associated Samples	17
Number of Associated Scaffolds	106

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	79.21 %
% of genes near scaffold ends (potentially truncated)	79.25 %
% of genes from short scaffolds (< 2000 bps)	75.47 %
Associated GOLD sequencing projects	10
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.32

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (69.811 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Ice → Glacial Lake → Freshwater (83.019 % of family members)
Environment Ontology (ENVO)	Unclassified (83.019 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (83.019 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 35.23% β-sheet: 0.00% Coil/Unstructured: 64.77%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.32
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.32
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF00075	RNase_H	4.72
PF00078	RVT_1	0.94

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.81 %
All Organisms	root	All Organisms	30.19 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.81 %
cellular organisms	root	All Organisms → cellular organisms	30.19 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.81 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	30.19 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.81 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.81 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.81 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.81 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.81 %
Planctomycetaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.81 %
unclassified Planctomycetaceae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.81 %
Planctomycetaceae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	0.94 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300007516\|Ga0105050_10329690	Not Available	926	Open in IMG/M
3300007519\|Ga0105055_10054647	Not Available	4282	Open in IMG/M
3300007519\|Ga0105055_10079321	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	3462	Open in IMG/M
3300007519\|Ga0105055_10131813	Not Available	2563	Open in IMG/M
3300007519\|Ga0105055_10260026	All Organisms → cellular organisms → Bacteria	1644	Open in IMG/M
3300007519\|Ga0105055_10492913	All Organisms → cellular organisms → Bacteria	1029	Open in IMG/M
3300007519\|Ga0105055_11061840	All Organisms → cellular organisms → Bacteria	580	Open in IMG/M
3300007519\|Ga0105055_11068325	All Organisms → cellular organisms → Bacteria	577	Open in IMG/M
3300007519\|Ga0105055_11070048	Not Available	577	Open in IMG/M
3300007519\|Ga0105055_11126282	Not Available	556	Open in IMG/M
3300007519\|Ga0105055_11218614	Not Available	526	Open in IMG/M
3300007519\|Ga0105055_11272073	Not Available	510	Open in IMG/M
3300007520\|Ga0105054_10057144	All Organisms → cellular organisms → Bacteria	4120	Open in IMG/M
3300007520\|Ga0105054_10243551	All Organisms → cellular organisms → Bacteria	1685	Open in IMG/M
3300007520\|Ga0105054_10291595	Not Available	1483	Open in IMG/M
3300007520\|Ga0105054_10360357	Not Available	1269	Open in IMG/M
3300007520\|Ga0105054_10401109	Not Available	1171	Open in IMG/M
3300007520\|Ga0105054_10534903	Not Available	937	Open in IMG/M
3300007520\|Ga0105054_10635384	Not Available	820	Open in IMG/M
3300007520\|Ga0105054_10754587	Not Available	718	Open in IMG/M
3300007520\|Ga0105054_10931109	All Organisms → cellular organisms → Bacteria	613	Open in IMG/M
3300007522\|Ga0105053_10019149	Not Available	7700	Open in IMG/M
3300007522\|Ga0105053_10597685	Not Available	864	Open in IMG/M
3300007522\|Ga0105053_10661071	All Organisms → cellular organisms → Bacteria	799	Open in IMG/M
3300007522\|Ga0105053_10792004	Not Available	696	Open in IMG/M
3300007522\|Ga0105053_11014043	All Organisms → cellular organisms → Bacteria	579	Open in IMG/M
3300007523\|Ga0105052_10019402	Not Available	5386	Open in IMG/M
3300007523\|Ga0105052_10457411	Not Available	830	Open in IMG/M
3300007523\|Ga0105052_10740336	All Organisms → cellular organisms → Bacteria	622	Open in IMG/M
3300007523\|Ga0105052_10827549	Not Available	581	Open in IMG/M
3300007523\|Ga0105052_10869699	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M
3300007722\|Ga0105051_10025515	Not Available	4980	Open in IMG/M
3300007722\|Ga0105051_10282388	Not Available	1255	Open in IMG/M
3300007722\|Ga0105051_10367992	Not Available	1077	Open in IMG/M
3300007722\|Ga0105051_10610200	Not Available	801	Open in IMG/M
3300007722\|Ga0105051_10639690	Not Available	779	Open in IMG/M
3300007722\|Ga0105051_11359537	Not Available	501	Open in IMG/M
3300011188\|Ga0136587_1026430	Not Available	1409	Open in IMG/M
3300011188\|Ga0136587_1051804	Not Available	1003	Open in IMG/M
3300011188\|Ga0136587_1061921	Not Available	919	Open in IMG/M
3300011188\|Ga0136587_1075268	All Organisms → cellular organisms → Bacteria	834	Open in IMG/M
3300011188\|Ga0136587_1082035	Not Available	801	Open in IMG/M
3300011188\|Ga0136587_1142847	Not Available	614	Open in IMG/M
3300011188\|Ga0136587_1187656	Not Available	539	Open in IMG/M
3300011188\|Ga0136587_1199109	Not Available	524	Open in IMG/M
3300011188\|Ga0136587_1214563	Not Available	506	Open in IMG/M
3300011188\|Ga0136587_1214712	Not Available	506	Open in IMG/M
3300012268\|Ga0136590_1031577	Not Available	950	Open in IMG/M
3300012272\|Ga0136586_1035748	Not Available	1123	Open in IMG/M
3300012272\|Ga0136586_1042654	Not Available	1026	Open in IMG/M
3300012272\|Ga0136586_1130090	Not Available	610	Open in IMG/M
3300012272\|Ga0136586_1152834	Not Available	567	Open in IMG/M
3300027832\|Ga0209491_10008330	Not Available	13226	Open in IMG/M
3300027832\|Ga0209491_10015732	All Organisms → cellular organisms → Bacteria	8369	Open in IMG/M
3300027832\|Ga0209491_10050155	Not Available	4186	Open in IMG/M
3300027832\|Ga0209491_10050552	Not Available	4168	Open in IMG/M
3300027832\|Ga0209491_10050969	Not Available	4147	Open in IMG/M
3300027832\|Ga0209491_10330670	Not Available	1148	Open in IMG/M
3300027832\|Ga0209491_10347058	Not Available	1102	Open in IMG/M
3300027832\|Ga0209491_10396058	All Organisms → cellular organisms → Bacteria	984	Open in IMG/M
3300027832\|Ga0209491_10482259	All Organisms → cellular organisms → Bacteria	824	Open in IMG/M
3300027832\|Ga0209491_10650586	All Organisms → cellular organisms → Bacteria	620	Open in IMG/M
3300027832\|Ga0209491_10663732	Not Available	608	Open in IMG/M
3300027832\|Ga0209491_10742748	Not Available	544	Open in IMG/M
3300027848\|Ga0209390_10061708	All Organisms → cellular organisms → Bacteria	3679	Open in IMG/M
3300027848\|Ga0209390_10080748	All Organisms → cellular organisms → Bacteria	3137	Open in IMG/M
3300027848\|Ga0209390_10154435	All Organisms → cellular organisms → Bacteria	2066	Open in IMG/M
3300027848\|Ga0209390_10172946	Not Available	1912	Open in IMG/M
3300027848\|Ga0209390_10329312	Not Available	1168	Open in IMG/M
3300027848\|Ga0209390_10350832	Not Available	1108	Open in IMG/M
3300027848\|Ga0209390_10382697	Not Available	1028	Open in IMG/M
3300027848\|Ga0209390_10459995	Not Available	876	Open in IMG/M
3300027848\|Ga0209390_10744747	Not Available	555	Open in IMG/M
3300027976\|Ga0209702_10377304	Not Available	563	Open in IMG/M
3300027983\|Ga0209284_10042412	Not Available	2548	Open in IMG/M
3300027983\|Ga0209284_10209083	Not Available	1009	Open in IMG/M
3300027983\|Ga0209284_10299854	Not Available	813	Open in IMG/M
3300027983\|Ga0209284_10331384	Not Available	763	Open in IMG/M
3300027983\|Ga0209284_10600260	Not Available	514	Open in IMG/M
3300028373\|Ga0306897_1057908	Not Available	666	Open in IMG/M
3300028413\|Ga0306870_1050927	Not Available	743	Open in IMG/M
3300028413\|Ga0306870_1085317	Not Available	570	Open in IMG/M
3300032435\|Ga0335398_10052687	Not Available	4138	Open in IMG/M
3300032435\|Ga0335398_10081416	All Organisms → cellular organisms → Bacteria	3230	Open in IMG/M
3300032435\|Ga0335398_10108629	All Organisms → cellular organisms → Bacteria	2720	Open in IMG/M
3300032435\|Ga0335398_10118865	Not Available	2572	Open in IMG/M
3300032435\|Ga0335398_10141263	Not Available	2305	Open in IMG/M
3300032435\|Ga0335398_10213209	All Organisms → cellular organisms → Bacteria	1747	Open in IMG/M
3300032435\|Ga0335398_10319477	All Organisms → cellular organisms → Bacteria	1292	Open in IMG/M
3300032435\|Ga0335398_10358602	Not Available	1179	Open in IMG/M
3300032435\|Ga0335398_10389082	All Organisms → cellular organisms → Bacteria	1103	Open in IMG/M
3300032435\|Ga0335398_10458644	All Organisms → cellular organisms → Bacteria → PVC group	961	Open in IMG/M
3300032435\|Ga0335398_10531512	All Organisms → cellular organisms → Bacteria	843	Open in IMG/M
3300032435\|Ga0335398_10666252	All Organisms → cellular organisms → Bacteria	683	Open in IMG/M
3300032462\|Ga0335396_10160794	All Organisms → cellular organisms → Bacteria	1480	Open in IMG/M
3300032462\|Ga0335396_10293715	All Organisms → cellular organisms → Bacteria	1060	Open in IMG/M
3300032462\|Ga0335396_10393662	Not Available	894	Open in IMG/M
3300032462\|Ga0335396_10432961	Not Available	844	Open in IMG/M
3300032462\|Ga0335396_10702246	Not Available	619	Open in IMG/M
3300032462\|Ga0335396_10711164	All Organisms → cellular organisms → Bacteria	614	Open in IMG/M
3300032462\|Ga0335396_10730469	All Organisms → cellular organisms → Bacteria	603	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	83.02%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	16.98%

Habitat	Taxonomy	Distribution
Ice	Environmental → Aquatic → Freshwater → Ice	83.02%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	16.98%

Habitat	Taxonomy	Distribution
Glacial Lake	Environmental → Aquatic → Freshwater → Ice → Glacial Lake	83.02%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	16.98%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater → Ice → Glacial Lake → Freshwater	83.02%
Saline Lake	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Lake	16.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300007516	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - FRY-01	Environmental	Open in IMG/M
3300007519	Freshwater microbial communities from Lake Bonney liftoff mats and glacier meltwater in Antarctica - BON-03	Environmental	Open in IMG/M
3300007520	Freshwater microbial communities from Lake Bonney liftoff mats and glacier meltwater in Antarctica - BON-02 (megahit assembly)	Environmental	Open in IMG/M
3300007522	Freshwater microbial communities from Lake Bonney liftoff mats and glacier meltwater in Antarctica - BON-01	Environmental	Open in IMG/M
3300007523	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - FRY-03	Environmental	Open in IMG/M
3300007722	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - FRY-02 (megahit assembly)	Environmental	Open in IMG/M
3300011188	Saline lake microbial communities from Rauer Islands, Antarctica - Metagenome Filla 1 #563	Environmental	Open in IMG/M
3300012268	Saline lake microbial communities from Rauer Islands, Antarctica - Metagenome Filla 3 #765	Environmental	Open in IMG/M
3300012272	Saline lake microbial communities from Rauer Islands, Antarctica - Metagenome Filla 1 #562	Environmental	Open in IMG/M
3300027832	Freshwater microbial communities from Lake Bonney liftoff mats and glacier meltwater in Antarctica - BON-02 (SPAdes)	Environmental	Open in IMG/M
3300027848	Freshwater microbial communities from Lake Bonney liftoff mats and glacier meltwater in Antarctica - BON-01 (SPAdes)	Environmental	Open in IMG/M
3300027976	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - FRY-01 (SPAdes)	Environmental	Open in IMG/M
3300027983	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - FRY-03 (SPAdes)	Environmental	Open in IMG/M
3300028373	Saline lake microbial communities from Rauer Islands, Antarctica - Metagenome Filla 1 #563 (v2)	Environmental	Open in IMG/M
3300028413	Saline lake microbial communities from Rauer Islands, Antarctica - Metagenome Hop E1 #496 (v2)	Environmental	Open in IMG/M
3300032435	Freshwater microbial communities from Lake Bonney liftoff mats and glacier meltwater in Antarctica - BON-03 (spades assembly)	Environmental	Open in IMG/M
3300032462	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - FRY-02 (spades assembly)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0105050_103296902	3300007516	Freshwater	MTVSENRASCWVHKGSDLTVTTKQIQALLTAARVSGEEDECQVRLTGIEQEYWMGTEIGRLEG*
Ga0105055_100546472	3300007519	Freshwater	MAVSEDHASCWVHKDLTVTTKQIQALLTAARASGGKDECQVRLTGIEREYWMGTEIGRLG
Ga0105055_100793213	3300007519	Freshwater	MAVNEDHASCWVYKDLTVTTKKIQALLTAARASGRKDKCQLRLTGIDRQYWMGTEVGRLGGYCS*
Ga0105055_101318131	3300007519	Freshwater	MAVSKDHASYWVQKDVTVSTKQVGTLLTTARALGGKTQCQIPLTGIEWEYWMGTEISRLGGYGF*
Ga0105055_102600262	3300007519	Freshwater	MAVSEDHASCWVYKDLNVTTKLIQALLTAARASGGKDECQVRLTGIEREYWMGTEISRLGGYGF
Ga0105055_104929131	3300007519	Freshwater	MAVSEDHASCWVHKDLTVKTKQIQALLTAARASGGKDECQVRLTGIEREYWMGTEIGRL
Ga0105055_110618402	3300007519	Freshwater	IKMVVSEDHASCWVHKDLTVTTKQIQALLTAARASGGKDKFQVRLTGIKREYWIGTEIGRLGGYGF*
Ga0105055_110683251	3300007519	Freshwater	RSWWKQGNIKMAMSEDHASCWVHKDLTVTTKQIQALLKAARVSGGKDKCQVRLTGIEREYWIGTEIGRLGGYGF*
Ga0105055_110700482	3300007519	Freshwater	MAMSEEHASCWVHKDFTVPTKQIQALFTAARASGGKDECQVRLIGIEREYWMGTKIGRLGGYGF*
Ga0105055_111262822	3300007519	Freshwater	MVGSEDHASCWVHKDLTVTKQIQALLTAARASGGKDECQVRLTGIEREYWMGTEIGRLG
Ga0105055_112186142	3300007519	Freshwater	MAVSEDHASCWVYKDLTVTTKQIQALLTAARASGGKDECQVRLTGIEREYWMG
Ga0105055_112720732	3300007519	Freshwater	MAVSEDHASSSCWVHKDLTVTTKQIQALLTAARASGGKDECQVRLTGIER
Ga0105054_1005714410	3300007520	Freshwater	MAVSEDHASCWVHKDLTVTTKQIQALLTAARALGGKDEYQVRLTGIEREYWMGKDIC
Ga0105054_101906621	3300007520	Freshwater	VSKDHASCWVHKDLIVTTKQIEALLTAVRASGGKDEYQVRLTGIEREYWMGTEIG
Ga0105054_102435511	3300007520	Freshwater	HKDLTVTTKQIQALLTAARASGGKDKFQVRLTGIKREYWIGTEIGRLGGYGF*
Ga0105054_102915951	3300007520	Freshwater	MTVSEDHASCWVHKDLTVTTKQIQALLTAARASGGKDECQVRLTGIEREYWMGTEI
Ga0105054_103603573	3300007520	Freshwater	MAVSDHHASFWVHKDLTVTTKQIQALLTAARASGGKDECRVRLTGIKREYWMGTEIGRLGGYGFRGTV
Ga0105054_104011092	3300007520	Freshwater	MAVSEDHASCWVHKDFIVTTKQIQALLTAARASGGKDECQVRLTGIEREYWMGTEI
Ga0105054_105349031	3300007520	Freshwater	MKMAVSEDHASCRVHKDLIVTTKPIQALLTAARASGGKDECQVRLTGIEREYWM
Ga0105054_106353842	3300007520	Freshwater	MAMSEDHASRWVHKDLTVTAKQIQALLTAARVSGGKDECQVRLTGIEREYWMG
Ga0105054_107545873	3300007520	Freshwater	MAVREDHASCWVHKDLTVTTKQIQALLTAARASGGKDECQVRLTGIEREYWMGTEIGRLEGYCFR
Ga0105054_107713891	3300007520	Freshwater	MVVSEDHASCWVHKDLTVTTKQIQALLTAARASGGKDKFQVRLTG
Ga0105054_109311091	3300007520	Freshwater	MAVSEDHASRWVHKDLTVTTKQIQALLTAARASGGKDECQVRLTGIEREY
Ga0105053_100191491	3300007522	Freshwater	MAVSEDHASCWVHNDLTVTTKQIQALLTAARASGGKDECQVRLTGIEREYWMGTE
Ga0105053_105976851	3300007522	Freshwater	MAMSEDHASRWVHKDLTVTAKQIQALLTAARVSGGKDECQVRLTGIEREYWMGT
Ga0105053_106610712	3300007522	Freshwater	MAVSEDHASCWVRKDLTVTTKQIQALLTAARASGGKDECQVRLTGIEREYWMG
Ga0105053_107920041	3300007522	Freshwater	MAVSEDHASCWVHKDFIVTTKQIQALLTAARASGGKDECQVRLTGIERE
Ga0105053_110140433	3300007522	Freshwater	MAVSEDHASCWVHKDLIVTTKQIQALLTAAKASGGKDECQVRLTGIEREYWMGT
Ga0105053_110360461	3300007522	Freshwater	MAMREDHASCWVHKDLTVTTKQIQALLTAARASGGKDECQVRL
Ga0105052_100194021	3300007523	Freshwater	MAMTENHASCWVHKDLNVTTKQIQALLTAARASGGKDVCQVRLTGIEGEYWMGTEIGRLRG*
Ga0105052_104574113	3300007523	Freshwater	MAVREDDASCWVHKDLTVTTKQIQALLTAARASGGKDECQVRLTGIEREYWMGTEIGRLG
Ga0105052_107403362	3300007523	Freshwater	MAVSEDHASCWVLKDLTVTTKQIQALLTAARASGGKDECQVRLTGIEREYWMGTEIGRLGGYG
Ga0105052_108275491	3300007523	Freshwater	MAESEDRASCWVHKDLNVTTKQILALLTAARVSGGKDECQVRLTGIERE
Ga0105052_108696992	3300007523	Freshwater	MAVSEDHASCWVHKDLIVITKQIQALFTAARASGGKDECQVRLTGIERECWMGTEISRLRGYGFRGTV
Ga0105051_100255151	3300007722	Freshwater	MAVSEDDTSCWVHKDLTVTTKQIQALLTAVKASGGKDECQVRLTGIEREYWMGT
Ga0105051_102823881	3300007722	Freshwater	MVVSEDHAFRWVHKDLTFTTKLIRALLTAARVSGGKDERQVRLTGIEREYWM
Ga0105051_103679922	3300007722	Freshwater	MVVSDDHASCCVHKDFTVTTKQIQVLLTAAWASGGKDERQVRLTDTEREYWMGTEIGILGG*
Ga0105051_105537253	3300007722	Freshwater	MAVREDDASCWVHKDLTVTTKQIQALLTAARASGGKDECQVRLTGIE
Ga0105051_106102001	3300007722	Freshwater	MAVSEDHASYWVHKDLTVTTKQIQALLTAARASGGKDECQVRLTGIEREYWMGTEIGRL
Ga0105051_106396902	3300007722	Freshwater	MAMSEDHASCWVHKDLTVTTKRIQAFLTAARASGGKDECQVRLTSIEREHWMGT
Ga0105051_113595372	3300007722	Freshwater	MALSQDHASCWVRKDLTVTTKQIETLLTAARASCGKDECQVRLTGIEREYWMGTEIGRL
Ga0136587_10264303	3300011188	Saline Lake	VSEDHASCWVHKDLTVTTKQIQALLTAARASDRKGECQVRLAGIEREYWMGTEIGRLGGYGFRGTV
Ga0136587_10518041	3300011188	Saline Lake	MAVSEDHASCWVHNDLTVTTKQIQALLTAARASGGKDECQVRLTGIEREYWMGT
Ga0136587_10619211	3300011188	Saline Lake	MVVSEDHASCWVHKDLTVTTKHIQALLTAARASGGKDECQVRLTGIEREYWMGTEI
Ga0136587_10752681	3300011188	Saline Lake	SEDHASCWVHKDLTVTTKQIQALLTAAKASGGKDKCQVRLTGIEREYWMGTEIGRLGG*
Ga0136587_10820351	3300011188	Saline Lake	MAVSEDHASCWVHKDLIVTTKQIQALLTAARVSGGKDECQVRLTGIEREYWMG
Ga0136587_11428472	3300011188	Saline Lake	MAMTEDHASCWVHKNLAVTTKQIQTLLTAARVSGGKDECQERLTGIEREYWMATKIGK
Ga0136587_11876561	3300011188	Saline Lake	MTVSEDYASCWVHKDLTVTTKQIQAWLTAARASGGKDECQVRLTGIEREYWMGTEIGRLG
Ga0136587_11991091	3300011188	Saline Lake	MAVSEDHASCWVHNNHLTVKTKQIQALLTAARVSGGKDECQVRLTGIEREYWMGTEIGRLGGYG
Ga0136587_12145631	3300011188	Saline Lake	MAVSEDHASFWVHKNLKVTTKQIRALLTAARASGGKDERQVRMTGIELEYWMGTEIGRLGVYG
Ga0136587_12147122	3300011188	Saline Lake	MAMSEDHASRWVHKDLIVTRKQIQTLLTAGRASGGKDECQVRLTGIKREYWMGAEIGRLGGY
Ga0136590_10315771	3300012268	Saline Lake	MSEDRASCCVHKDLTVTANLIQDLLTTARTSGGKDECQVRLTGIEREYWNGTEIGRLGGYGF*
Ga0136586_10357482	3300012272	Saline Lake	MVVSEDHASCWVHKDLTVTTKQIQALLTAARASGGKDEYQVRLTGIEREYWMGTEIGR
Ga0136586_10426541	3300012272	Saline Lake	MAMSEDHTSCWVHKDLTVTTKQIQALLTAARASGGKDECQVRLTGIELEYWMGTEIGRLG
Ga0136586_11300901	3300012272	Saline Lake	MAVSEDHASYWVHKDPTFTTNQIRALLTTVRASGEKDECQVRLTGIEREY
Ga0136586_11528342	3300012272	Saline Lake	MAVSEDHASCWVHKDLTVTTKQIQALLTAAKASGGKDECQVRLTGIEREYWMGT
Ga0209491_1000833014	3300027832	Freshwater	KQGNIKMAVSEDHASCCVHKDLTVTTKQIQAMLTAARASGGKDECQVRLTGIEREY
Ga0209491_1001573218	3300027832	Freshwater	MAVSEDHASFWVHKDLKVTTKQIRALLTAARVSGGKDERQVRMTGIELEYWMGTEI
Ga0209491_100501558	3300027832	Freshwater	MAVSEDHASCWVHKDLTVTKQIQALLTAARASGGKYKCQVRLTGIEQE
Ga0209491_100505521	3300027832	Freshwater	MAMSEDHASCWVHKDLTVTTKQIQALLTSARASGGIDECQVRLTGIEREYWMG
Ga0209491_100509696	3300027832	Freshwater	MAVSEDYASCWVHKDLTVTTKQIQALLTAARASGGKDECQVRLTGIEREYWMGTEIGRLG
Ga0209491_103306701	3300027832	Freshwater	MKMAVSDNHASCWVHKDLTVTTTKDQALLTAARASGRKDKCQVRLTGIERECWIVTEIGR
Ga0209491_103470582	3300027832	Freshwater	MAVSEDHASCWVHKDFIVTTKQIQALLTAARASGGKDECQVRLTGIER
Ga0209491_103960581	3300027832	Freshwater	MAVSEDHASCWVHKDVTVTTKQIQALLTAARASGGKDECQVRLTGIEREYRM
Ga0209491_104822591	3300027832	Freshwater	MAVSEDHASCWVHKDLTVTTKQIQALLTAARASGGKDECQVRLTGIEQEYW
Ga0209491_106505861	3300027832	Freshwater	MAVIEDHASCWVHKDLTVTTKQIQASLTAARASGGKDECQVRLTGIEREYWMGTEISRLG
Ga0209491_106637321	3300027832	Freshwater	KMVVSEDHTSCWVHKDLTVTTMQIQALLTAARASSGKDEYQVRLTGIEREYWIGTEISRLKCYSFRCTVTEVD
Ga0209491_107427482	3300027832	Freshwater	MTVSENRASCWVHKGSDLTVTTKQIQALLTAARVSGEEDECQVRLTGIEQEYWMGTEIGRLEG
Ga0209390_100617082	3300027848	Freshwater	MVVSEDHASCWVHKDLTVTTKQIQALLTAARASGGKDKFQVRLTGIKREYWIGTEIGRLGGYGF
Ga0209390_100807485	3300027848	Freshwater	MAMSEEHASCWVHKDFTVPTKQIQALFTAARASGGKDECQVRLIGIEREYWMGTKIGRLGGYGF
Ga0209390_101544351	3300027848	Freshwater	MAMSEDHASCWVHKDLTVTTKQIQALLTSARASGGIDECQVRLTGIEREYWMGTEIGRLGGYGF
Ga0209390_101729462	3300027848	Freshwater	MVTGKQGNVKMAESEDHASCWVHKDLTVTTKQIEALLTAARASGGKDECQVQLIGIEREYWMGTVIGRSGG
Ga0209390_103293121	3300027848	Freshwater	MAVIENHASCWVHKVLTVTTKQIQALLTAARASGGKDECQVRLTGIEREYWMGTEIGRLG
Ga0209390_103508321	3300027848	Freshwater	MAVSEDHASCWVHKDLTVTTKQIQALLTAARASGGKDECQVRLTGIEQEYWMDTE
Ga0209390_103826972	3300027848	Freshwater	MTVSEDYASCWVHKDLTVTTKQIQAWLTAARASGGKDECQVRLTGIEREYWMGT
Ga0209390_104599951	3300027848	Freshwater	MAVSEDHASCWVHKDLTVTTKKIQALLTGTKASGGKDECQVRLTGIEREYWMGTEIGRLGGY
Ga0209390_107447471	3300027848	Freshwater	MRVSENYASCWVRKDLTVTTKQIQALLTAARASGGKDECQVRLTGIEREYWMC
Ga0209702_103773041	3300027976	Freshwater	MAESEDRASCWVHKDLNVTTKQILALLTAARVSGGKDECQVRLTGIERENLIF
Ga0209284_100424121	3300027983	Freshwater	YRSWWKQMAMTENHASCWVHKDLNVTTKQIQALLTAARASGGKDVCQVRLTGIEGEYWMGTEIGRLRG
Ga0209284_102090832	3300027983	Freshwater	MVVSEDHTSCWVHKDLTVTTMQIQALLTAARASSGKDEYQVRLTGIEREYWIGTEISRLKCYSFRCTVTEVD
Ga0209284_102998541	3300027983	Freshwater	MAVSEDHASCWVHKDLTVTIKQIQALLTAARASGGKDECQVRLTGIEWEYWMGTEI
Ga0209284_103313841	3300027983	Freshwater	MAVSEDHASCWVHKDLTVTTKQIQTLLRAARASGRKDECQVRLTGIEREYWM
Ga0209284_106002601	3300027983	Freshwater	LGFPLDHKMAMSEDHDSCWVHKDLTVTAKQIQALLTAARVSGGEDECQVRLTGIEREY
Ga0306897_10579082	3300028373	Saline Lake	MKMAVSDNHASCWVHKDLTVTTTKDQALLTAARASGRKDKCQVRLTGIERECW
Ga0306870_10509271	3300028413	Saline Lake	MAVSEEYASCWVHKDLTVTTKQIKALLTAARASGGKDECQARLTGIEREYWMGTEIGRLGGYGF
Ga0306870_10853171	3300028413	Saline Lake	MKMAVSDNHASCWVHKDLTVTTTKDQALLTAARASGRKDKCQVRLTGIERECWMVTEIGR
Ga0335398_100526874	3300032435	Freshwater	MAVSEDYASCWVHKDLTVTTKQIQALLTAARASGGKDECQVRLTGIEREYWMGTEIGR
Ga0335398_100814163	3300032435	Freshwater	MAMSEDHASCWVHKDLTVTTKQIQALLTAARASGGKDECQTRLKGIEREYWIGTEISRLG
Ga0335398_101086292	3300032435	Freshwater	MAVSEDHTSCWAHKDLTVTTKQIQALLTAARASGRKDECQVRLTGIEREYWMGTEISR
Ga0335398_101188651	3300032435	Freshwater	MTVSEDHASCWVHKDLIVTTKQIQALLTAARASGGKDECQVRLTGIEREYWMGT
Ga0335398_101412631	3300032435	Freshwater	VHKDLTVTTKQIQVLLTAARASGGKDECQVRLTGIEREYWMGTEIGRLGGYGF
Ga0335398_102015631	3300032435	Freshwater	MKMAVSEDHASCWVHKDLTVTTKQIQALLTVARASGGKDESQVRLTGIER
Ga0335398_102132091	3300032435	Freshwater	MAVSEDHASCWVHKDLTVTTKQIQALLTAARASGGKDECQVRLTGIEQEYWMGTEIGRL
Ga0335398_103194773	3300032435	Freshwater	WVHKDLTVTTKQIQALLTAARASGGKDECQVRLTGIEREYWMRTEIGRL
Ga0335398_103586021	3300032435	Freshwater	MAVSEDHASCWVHKDFIVTTKQIQALLTAARASGGKDECQVRLTGIEREYWMGTEIG
Ga0335398_103890821	3300032435	Freshwater	MAVSEDHASCWVYKDLTVTTELIQALLTAARASGGKDECQVRLTGIEREYWMGTEISRLGGYGFR
Ga0335398_104586443	3300032435	Freshwater	NIKMAVSEDHASCWVQKYLTVTTKQIQTLLTAARVSGGKDECQVLLTGIEREY
Ga0335398_105315121	3300032435	Freshwater	MAVSEDHASCWVRKDLTVTTKQIQALLTAARASGGKDECQVRLTGIEREYWMGTE
Ga0335398_106662522	3300032435	Freshwater	MAVSEDHASCRVHKDLTVKTKQIQALLTAARASGGKDECQVRLRGIQQEYWMGTEIDKLGSYGF
Ga0335396_101607943	3300032462	Freshwater	MAVSEDHASCWVHEDLTVTTKQIQVLLPVARASGGKDECQVRLTGIEREYWMGTE
Ga0335396_102937151	3300032462	Freshwater	MGVREDHASCWVHKDLTVTTKQIQALLTAARASGGKDECQVRLTGIEHCFWQDTDHSTGEEYTAS
Ga0335396_103936622	3300032462	Freshwater	MAVSEDHASYWVHKDLTVTTKQIQALLTAARASGGKDECQVRLTGIEREY
Ga0335396_104329613	3300032462	Freshwater	MAVSEDHASCWVHKNLTVTTKQIQALLTAARASGGKDECQVRLTGIKQEYWMGTEISRLGGYGF
Ga0335396_107022462	3300032462	Freshwater	MAVSEDHASCWVYKDLTVTTKQIQDLFTAARASGGKDECQVRLTGIEREYWMGTEIGR
Ga0335396_107111642	3300032462	Freshwater	MPVSEDHASCWVHKDLTVTTKQIQALLTAARASDGKDECQVRLTGIEREYWMGTEI
Ga0335396_107304691	3300032462	Freshwater	MAVSKDHASCWVYKDLTVSTEQIQALLTAARASGGKDECQVRLTGIEREYWMGTEIGRL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F093314

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences