Metagenome Family F093257

Overview

Basic Information

• Family ID: F093257
• Family Type: Metagenome
• Number of Sequences: 106
• Average Sequence Length: 45 residues
• Representative Sequence: MNIYLAVTAEELQAEISPIQRFVKGVRHFDATFEVEGLVFPPTS
• Number of Associated Samples: 9
• Number of Associated Scaffolds: 106

Quality Assessment

• Transcriptomic Evidence: No
• Most common taxonomic group: Unclassified
• % of genes with valid RBS motifs: 0.00 %
• % of genes near scaffold ends (potentially truncated): 1.89 %
• % of genes from short scaffolds (< 2000 bps): 1.89 %
• Associated GOLD sequencing projects: 5
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.29

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Unclassified (100.000 % of family members)
• NCBI Taxonomy ID: N/A
• Taxonomy: N/A

Most Common Ecosystem

• GOLD Ecosystem: Host-Associated → Annelida → Digestive System → Digestive Tube → Extracellular Symbionts → Marine Gutless Worms Symbiont (100.000 % of family members)
• Environment Ontology (ENVO): Unclassified (100.000 % of family members)
• Earth Microbiome Project Ontology (EMPO): Host-associated → Animal → Animal proximal gut (100.000 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 33.33%
  β-sheet: 0.00%
  Coil/Unstructured: 66.67%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF00560	LRR_1	0.94
PF00515	TPR_1	0.94
PF14529	Exo_endo_phos_2	0.94

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG4886	Leucine-rich repeat (LRR) protein	Transcription [K]	0.94

Phylogeny

NCBI Taxonomy

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

Associated Scaffolds

Scaffold	Taxonomy	Length
3300005653|Ga0056133_10387732	Not Available	737
3300008215|Ga0056108_1265805	Not Available	1008

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	100.00%

Class

Habitat	Taxonomy	Distribution
Annelida	Host-Associated → Annelida	100.00%

Category

Habitat	Taxonomy	Distribution
Digestive System	Host-Associated → Annelida → Digestive System	100.00%

Type

Habitat	Taxonomy	Distribution
Digestive Tube	Host-Associated → Annelida → Digestive System → Digestive Tube	100.00%

Subtype

Habitat	Taxonomy	Distribution
Extracellular Symbionts	Host-Associated → Annelida → Digestive System → Digestive Tube → Extracellular Symbionts	100.00%

Habitat

Habitat	Taxonomy	Distribution
Marine Gutless Worms Symbiont	Host-Associated → Annelida → Digestive System → Digestive Tube → Extracellular Symbionts → Marine Gutless Worms Symbiont	100.00%

Associated Samples

Taxon OID	Sample Name	Habitat Type
3300005652	Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Inanidrilus leukodermatus Group 1a BELIZE.1	Host-Associated
3300005653	Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Inanidrilus leukodermatus Group 2 BELIZE.1	Host-Associated
3300005970	Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Inanidrilus leukodermatus Group 2 BELIZE.2	Host-Associated
3300007818	Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Inanidrilus leukodermatus Group 1 BERMUDA.2	Host-Associated
3300008215	Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Inanidrilus leukodermatus Group 1 BERMUDA.1	Host-Associated
3300027044	Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Inanidrilus leukodermatus Group 1 BERMUDA.2 (SPAdes)	Host-Associated
3300027624	Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Inanidrilus leukodermatus Group 2 BELIZE.2 (SPAdes)	Host-Associated
3300027658	Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Inanidrilus leukodermatus Group 2 BELIZE.1 (SPAdes)	Host-Associated
3300027661	Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Inanidrilus leukodermatus Group 1a BELIZE.1 (SPAdes)	Host-Associated

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0056135_100288227	3300005652	Marine Gutless Worms Symbiont	MNIWLAVTAEELQAEISPIQRFVKGVRHFDATFEVEELVFSPTSMYR*
Ga0056135_100693221	3300005652	Marine Gutless Worms Symbiont	MNIQLAVTAEELQAEISPIQRFVKGVRHFDATFEVEGF*RVSISPNIYVPLDREMSVL*
Ga0056135_100792232	3300005652	Marine Gutless Worms Symbiont	MNIWLAVTAEELQAEVSPIQRFVKVVRHFDATFDVEGLVFPQHLCTVR*
Ga0056135_100812861	3300005652	Marine Gutless Worms Symbiont	LAVTAEELQAEISPIQRFVKGVRHFDATFEVEGLVFPPKSMYR*
Ga0056135_101024772	3300005652	Marine Gutless Worms Symbiont	MNIYLAVTAEELQAEISPIQPFVKVVRHFDATFEVEELVFSPRSMYR*
Ga0056135_101270181	3300005652	Marine Gutless Worms Symbiont	MKIQLAVTAEELQAEMSTIQRFVKGVRHFDATFEVEGLVFPPRSMYH*
Ga0056135_101271523	3300005652	Marine Gutless Worms Symbiont	MNMYLAVTADELQAEISPIQRFVKVTHPFEATFEVKGLVFPPTCKYR*
Ga0056135_101352151	3300005652	Marine Gutless Worms Symbiont	MNIWLAVTVEELQAEISPIQRFVKGVRHFDATFEVEGLVFFPTSMYR*
Ga0056135_101657052	3300005652	Marine Gutless Worms Symbiont	MNIQLDLTAEKPEAEISPIQRFVKGVRHFDATFEVEGLVFPPISMYRWIGE*
Ga0056135_101810844	3300005652	Marine Gutless Worms Symbiont	VINEHLAAVTAEELQAEISPVQRFVKGVRHFDATFEVEGLVFPQTSMYRSIGK*
Ga0056135_101818012	3300005652	Marine Gutless Worms Symbiont	MNIYLAVIDEELQAEISPIQRFVKVVRDFDATFHVEGLVFPPTSMYR*
Ga0056135_101841752	3300005652	Marine Gutless Worms Symbiont	MNISLAVTAEELQAETSPIQRFVKGVRHYDATFEVEGLVFPPTAMYR*
Ga0056135_101995751	3300005652	Marine Gutless Worms Symbiont	AVTAEELQAEISPIQRFVKGVRHFDATFEVEGLVFPPTSMDC*
Ga0056135_101998812	3300005652	Marine Gutless Worms Symbiont	MNVYLAVANEELQAEISPIQRFVKGVRHFDATFEVEGLVFPPTSMY
Ga0056135_102268191	3300005652	Marine Gutless Worms Symbiont	MSISLAVTAEELQAEISPIQRFVKGVRQFDATFEVEGLVIPQHLCTVR*
Ga0056135_102268832	3300005652	Marine Gutless Worms Symbiont	MNIYLAVTAEELPAKISPVQRFVKGVCHFDATFEVGRLVFPPDLYTIR*
Ga0056135_102680633	3300005652	Marine Gutless Worms Symbiont	MNILLVVTAEELQAEISPIQRFVKGVRHFDATFEVEGLVFPQDLCTVR*
Ga0056135_102737522	3300005652	Marine Gutless Worms Symbiont	MNISLAVTAEELEAEISPIQRFVKGVRHFDATFEVEGLVFHPTSMYR*
Ga0056135_103145751	3300005652	Marine Gutless Worms Symbiont	MNIYLAVTAEELQAEISPIQRFVKGVRHFDATFEVEGLVFPPTS
Ga0056135_103243151	3300005652	Marine Gutless Worms Symbiont	ISLAVTAEELQAEISPIQRFVKVVSHFHATFEVEGLVFPPTCMYR*
Ga0056135_103403922	3300005652	Marine Gutless Worms Symbiont	MNISLAVTTEELQAEISPIQRFVKGMRHFDTTFEVKGLVFPPTYIYR*
Ga0056135_103495132	3300005652	Marine Gutless Worms Symbiont	MNTAAVTAEELQAEISPIPRFVKVVRHFDATFEVKGLVFPPTSMYR*
Ga0056135_103811462	3300005652	Marine Gutless Worms Symbiont	VINKHLAAVTAEELQAEISPIQRFVKGVRQFDATFEVEGLVFP
Ga0056135_104880451	3300005652	Marine Gutless Worms Symbiont	MNKPAVTDEELQAEISPIQRFVKGVRHFDATFEVEGLVFPQHLC
Ga0056135_105025451	3300005652	Marine Gutless Worms Symbiont	MNSKLAVTAEELQAEISPIQRFVKGVRHFDATFEVEELV
Ga0056135_105451911	3300005652	Marine Gutless Worms Symbiont	MNIWLAVTAEELQAEISPIQRFVKVVRHFDATFKVEGLAFLPTSMYR*
Ga0056135_105514931	3300005652	Marine Gutless Worms Symbiont	MNISLAVTAEELQAEISPIQRLVKVVRHFDATFEVEGLVFPPTSMYR*
Ga0056133_100276992	3300005653	Marine Gutless Worms Symbiont	MNVYLAVANEELQAEISPIQRFVKGVRHFDATFEVEGLVFPPTSMYR*
Ga0056133_100301481	3300005653	Marine Gutless Worms Symbiont	MAIIQLKQLTVTADELQVEISLIQRFVKGVRHFDATFEVEGLVFPPTSMYR*
Ga0056133_100630681	3300005653	Marine Gutless Worms Symbiont	MNKQAVADEELQAEISPIQRFVKGVRHFDATFEVEELVFPPTSM
Ga0056133_100781684	3300005653	Marine Gutless Worms Symbiont	MNIWLDVTAEELQAEISPIQHFIKVVRHFDATFEVEGLVFPPTSM
Ga0056133_100987303	3300005653	Marine Gutless Worms Symbiont	MKILLAVTAEELQAEISPIQRFVKGVRHFDATFEVEGLVCPQTSMYR*
Ga0056133_101005801	3300005653	Marine Gutless Worms Symbiont	MSIYLAVTAEELQAEISPIQRFVKVVRHFDATFEVEGLVF
Ga0056133_101289123	3300005653	Marine Gutless Worms Symbiont	MNIQLAVTAEELQAEISPIQRFVKGVRHFDATFEIEGLLFPQTSMYR*
Ga0056133_101461932	3300005653	Marine Gutless Worms Symbiont	MNIQLAVTAEELQAEISPIQRFVKGVRHFDATFEVEGF*
Ga0056133_101479823	3300005653	Marine Gutless Worms Symbiont	TAEELQAEISPIQRFVKGVRHFDATFEVEGLVFPPTSMYL*
Ga0056133_101644651	3300005653	Marine Gutless Worms Symbiont	MNSKLAVTAEELQAEISPIQRFVKGVRHFDATFEVEELVFPPTS
Ga0056133_101863653	3300005653	Marine Gutless Worms Symbiont	MNIWLTVTAEELQAVIYPIQRFVKVMRHFDATFDVEGLVFPL
Ga0056133_101972641	3300005653	Marine Gutless Worms Symbiont	MNIYLAVTAKELQAEISPNPRIFKGVHHFDATFEVEGLAFPPTSMYR*
Ga0056133_102657242	3300005653	Marine Gutless Worms Symbiont	MNVSLAVTAEELQAEISPIQRFVKGVRHFDATFEVEGLVF
Ga0056133_102745782	3300005653	Marine Gutless Worms Symbiont	MNISLAVTAEELQAEISPIQRFVKGVRHFGATFEVEGLVLPQHLCIVR*
Ga0056133_103131692	3300005653	Marine Gutless Worms Symbiont	MNIELAVTAQELQAEISPIQRFVKVVRHFDATFEVEGLVFPP
Ga0056133_103320861	3300005653	Marine Gutless Worms Symbiont	MNISLAVTAEELQAEISPIQRFVKGVRHFDATFEVERLAFPPTSVYR*
Ga0056133_103877322	3300005653	Marine Gutless Worms Symbiont	VITEHLAVVTAEELQAEISPIQRFVKGVRHFAATSEVKGLVFPPTY
Ga0056133_104465762	3300005653	Marine Gutless Worms Symbiont	MINEHLAAVTAEELQAEISPIQRFVTVVRHFDATFEVDLVFFPTSMYR*
Ga0056133_104514081	3300005653	Marine Gutless Worms Symbiont	MSKLAVTAEELQAEISPIQRFVKGVRHFDATFEVEG
Ga0056133_104570381	3300005653	Marine Gutless Worms Symbiont	MNIYEELQAEISPIQRFVKGVRHFDATFEVEGLVFPPTSMYL*
Ga0056133_105019911	3300005653	Marine Gutless Worms Symbiont	MNIYLAVTAEGLQAEISPIQRFVKVMCHFDDTFEVEGLVFLPTSMYR*
Ga0056133_105047862	3300005653	Marine Gutless Worms Symbiont	MNILLAVIAEELQAEISPIQRFVKGVRHFDATFEVEGLVFPPTSMYR
Ga0056133_105503951	3300005653	Marine Gutless Worms Symbiont	VTAEELQAEISPIQRFVKGVRHFDATFEVEGLVFPPTSMYC*
Ga0056133_105565971	3300005653	Marine Gutless Worms Symbiont	MNIYLAVAAEVLQAEISRIQRFVKGVRHFDATFEVEELVFPPSLCTVR*
Ga0056134_100341602	3300005970	Marine Gutless Worms Symbiont	MNISLAVTDEELQAEISPIQRFIKGVCHFDATFEVEGLVLPQHLCTVR*
Ga0056134_100996111	3300005970	Marine Gutless Worms Symbiont	MKIQLAVTAEELQAEMSTIQRFVKGVRHFDATFEVEGLVFP
Ga0056134_101360291	3300005970	Marine Gutless Worms Symbiont	MNISLAVTAEELQAEISPIQRFVKVVRHFDATFEVEGL
Ga0056134_102261123	3300005970	Marine Gutless Worms Symbiont	MTFS*AVTAEELQAEISPIQRFVKEVRHFDATFEVEGLV
Ga0056134_102551322	3300005970	Marine Gutless Worms Symbiont	VINESLAAVTAEELQAEISPIQRFVKGVRHFDATFEVEG
Ga0056134_102681331	3300005970	Marine Gutless Worms Symbiont	AVTAEELQAEISPIQRFVKGVRHFDATFEVEGLVFPPTSMHH*
Ga0056134_102905521	3300005970	Marine Gutless Worms Symbiont	MNIQLAVTAEELQAEISPIQRFVKGVRHFDATFEVEGL
Ga0056134_104157082	3300005970	Marine Gutless Worms Symbiont	MNIWLDVTAEELQAEISPIQHFIKVVRHFDATFEVEG
Ga0056134_104787471	3300005970	Marine Gutless Worms Symbiont	AVTAEELQAEISPIQRFVKGVRHFDATFEVEGLVFPVFPPTSMYR*
Ga0056109_10805521	3300007818	Marine Gutless Worms Symbiont	MNVSLAVTAEELQAEISPIQRFVKGVRHFDATFEVEGLVFPQHL
Ga0056108_10345964	3300008215	Marine Gutless Worms Symbiont	VTAEELEAEISPIQRFVKGVRHFDATFEVEGLVFPPTSMYRSIGE*
Ga0056108_10800191	3300008215	Marine Gutless Worms Symbiont	MAVTAEELQAEISPIQRFVKGVRHFDATFEVEGLVFLPTS
Ga0056108_11633053	3300008215	Marine Gutless Worms Symbiont	MNVTAVTAEELQVEISPIQHFIKVVRHFDATFDVEGLVFPHF*
Ga0056108_12199001	3300008215	Marine Gutless Worms Symbiont	LAVTAEELQAEISPIQRFVKGVRHFGAAFEVEGLVFPPTSMYR*
Ga0056108_12658052	3300008215	Marine Gutless Worms Symbiont	LAVTAEELQAEISPIQRFVKGVRHFDATFEVEGLAFPPTSIYVLLDRGMSE*
Ga0056108_12884191	3300008215	Marine Gutless Worms Symbiont	MNISLAVTAEELQAEISPIQRFVKGVRHYDATFEVEGLVFPPTAMYR*
Ga0056108_12887361	3300008215	Marine Gutless Worms Symbiont	MNIQLAVTAEELEAEISPIQRFVKGVRHFDATFEVEGSVFLPISMYH*
Ga0056108_13385611	3300008215	Marine Gutless Worms Symbiont	MNI*LAVTAEELQAEISPIQRFVKGMRHFDAIFEGLVF
Ga0056108_13477092	3300008215	Marine Gutless Worms Symbiont	MSVLLAVTAEELQTQIFPIQRFVKGVRHFDATFEVEELVFPPTSVYRQVGA*
Ga0056108_13938961	3300008215	Marine Gutless Worms Symbiont	VTAEELEAEISPIQRFVKGVRHFDATFEVEGLVFPPTSMYRQIGE*
Ga0056108_14043821	3300008215	Marine Gutless Worms Symbiont	MNIYLAVTAEELQAEISPIQRFVKGVRHFDATFEVEGLVFPPNIY
Ga0056108_14218941	3300008215	Marine Gutless Worms Symbiont	MNIKLAVTAEELQAEISPFQRFVKGVRHFDATFEVEELVFPPTSMCR*
Ga0056108_14570241	3300008215	Marine Gutless Worms Symbiont	AVTAEELQAEISPIQRFVKGVRHFAATSEVKGLVFPPTYMYG*
Ga0056108_14741021	3300008215	Marine Gutless Worms Symbiont	LAVTAEELQAEISPIQRFVKGVRHFDATFEVEGLVFPPTSMHR*
Ga0056108_14783831	3300008215	Marine Gutless Worms Symbiont	LAVTAEELQAEISPIQRFVKGVRHFAATSEVKGLVFPPTYI*
Ga0056108_15149171	3300008215	Marine Gutless Worms Symbiont	EELQAEISPIQRFVKGVRHFDATFEVEGLVFPPTSMYR*
Ga0056108_15171011	3300008215	Marine Gutless Worms Symbiont	MNISLAITTEELQAEISPIQRFVKVVRHFDATFEVEGLVFPQLYVPLI*
Ga0056108_15207362	3300008215	Marine Gutless Worms Symbiont	MNSKLAVTAEELQAEISPIQRFVKGVRHFDATFEVEGLVFPPTS
Ga0056108_15241751	3300008215	Marine Gutless Worms Symbiont	MNIWLAVTAEELEADISPIQRFVKGVRHFDATFEVEGLVFPQDLCTIR*
Ga0209785_10148691	3300027044	Marine Gutless Worms Symbiont	MNIYLAVTAEELQAEISQIQRFVTGASCDATFEVEGFLRPIHTAH
Ga0209785_10622411	3300027044	Marine Gutless Worms Symbiont	MNVSLAVTAEELQAEISPIQRFVKGVRHFDATFEVEGLVFP
Ga0209789_101456054	3300027624	Marine Gutless Worms Symbiont	LAVTAEELQAEISPIQRFVKGVRHFAATSEVKGLVFPPTYMYH
Ga0209789_102254601	3300027624	Marine Gutless Worms Symbiont	MNIYEELQAEISPIQRFVKGVRHFDATFEVEGLVFPPTSMYL
Ga0209789_103123101	3300027624	Marine Gutless Worms Symbiont	MNIYLAVTAEELQAELSPIQRFVKGVRDFDATFDVEGLVFPPTCMYR
Ga0209259_10003734	3300027658	Marine Gutless Worms Symbiont	MNIQLGVTAEELQAKISPIQRFVKVVRHFDATFKVEGLVFPPTSMHC
Ga0209259_10378911	3300027658	Marine Gutless Worms Symbiont	MKIQLAVTAEELQAEMSTIQRFVKGVRHFDATFEVEGLVFPPRSMY
Ga0209259_10538471	3300027658	Marine Gutless Worms Symbiont	MKILLAVTAEELQAEISPIQRFVKGVRHFDATFEVEGLVCPQTSMYR
Ga0209259_11445212	3300027658	Marine Gutless Worms Symbiont	MNIYLAVTAEELQAEISPIQPFVKVVRHFDATFEVEELVFSPRSMYR
Ga0209259_11475692	3300027658	Marine Gutless Worms Symbiont	MNSKLAVTAEELQAEISPIQRFVKGVRHFDATFEVEELVFPPASM
Ga0209259_11550702	3300027658	Marine Gutless Worms Symbiont	MSISLAVTAEELQAEISPIQRFVKGVRQFDATFEVEGLVIPQHLC
Ga0209259_12103902	3300027658	Marine Gutless Worms Symbiont	LAVTAEELQAEISPIQRFVKGVRHFDATFEVERLVFPPTSMYR
Ga0209259_12584611	3300027658	Marine Gutless Worms Symbiont	MNISLAVTAEELQAEISPIQRFVKGVRHFDATFEVERLAFPPTSVYR
Ga0209259_12726841	3300027658	Marine Gutless Worms Symbiont	MNIQLAVTAQGLQAKISPIHRFVKVMRQFDATIIEVEGLVFPQHLYTLDR
Ga0209259_12997461	3300027658	Marine Gutless Worms Symbiont	MNIQLAVTAEELQAEISPIQRFVKGVRHFDATFEVE
Ga0209259_14200061	3300027658	Marine Gutless Worms Symbiont	MNILLAVIAEELQAEISPIQRFVKGVRHFDATFEVEGLVFPPTSM
Ga0209259_14557311	3300027658	Marine Gutless Worms Symbiont	AVTAEELQAEISPIQRFVKGVRHFDATFEIEGLVFPPTFIYS
Ga0209259_14689611	3300027658	Marine Gutless Worms Symbiont	MNISLAVTAEELQAEISPIQRFVKVVSHFHATFEVEGLVFPPTCMYR
Ga0209459_100941061	3300027661	Marine Gutless Worms Symbiont	LAVTAEELQAEISPIQRFVKGVRHFDATFEVEALVFPPTSMYR
Ga0209459_101503311	3300027661	Marine Gutless Worms Symbiont	MNIQLDLTAEKPEAEISPIQRFVKGVRHFDATFEVEGLVFPPISMYRWIGE
Ga0209459_101532101	3300027661	Marine Gutless Worms Symbiont	MSISLAVTAEELQAEISPIQRFVKGVRQFDATFEVE
Ga0209459_101929971	3300027661	Marine Gutless Worms Symbiont	MNIYLAVTAEELQAEISQIQRFVKRVRHVTLRTFEVEGF
Ga0209459_103432421	3300027661	Marine Gutless Worms Symbiont	MNIWLAVTVEELQAEISPIQRFVKGVRHFDATFEVEGLVFFPTSMYR
Ga0209459_103722071	3300027661	Marine Gutless Worms Symbiont	AEELQAEISPIQRFVKGVRHFDATFEVEGLVFPPTSMYHYKIGE
Ga0209459_103974441	3300027661	Marine Gutless Worms Symbiont	MNISLAVTAEELEAEISPIQRFVKGVRHFDATFEVEGLVFHPTSMYR
Ga0209459_104282661	3300027661	Marine Gutless Worms Symbiont	MNIQLAVTAEKLQTEISPIQRFVKGVRHFDATFEVEGLVFPPTSMYRYT