Metagenome / Metatranscriptome Family F093234

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F093234
Family Type	Metagenome / Metatranscriptome
Number of Sequences	106
Average Sequence Length	83 residues
Representative Sequence	MKVNIELESEQVDAIVLRELQRVLEQNIQDYINKINVCDTRKEHRKLIKSLRRAVAYFMVHEDFLDYMDELEWPVGDEEDKYEW
Number of Associated Samples	73
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	66.98 %
% of genes near scaffold ends (potentially truncated)	33.02 %
% of genes from short scaffolds (< 2000 bps)	73.58 %
Associated GOLD sequencing projects	67
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (60.377 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake (37.736 % of family members)
Environment Ontology (ENVO)	Unclassified (74.528 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (89.623 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 71.43% β-sheet: 0.00% Coil/Unstructured: 28.57%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF06067	DUF932	14.42
PF03796	DnaB_C	2.88
PF14489	QueF	2.88
PF12850	Metallophos_2	0.96
PF09511	RNA_lig_T4_1	0.96
PF01327	Pep_deformylase	0.96
PF01818	Translat_reg	0.96
PF01883	FeS_assembly_P	0.96
PF03767	Acid_phosphat_B	0.96
PF05118	Asp_Arg_Hydrox	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG0305	Replicative DNA helicase	Replication, recombination and repair [L]	2.88
COG1066	DNA repair protein RadA/Sms, contains AAA+ ATPase domain	Replication, recombination and repair [L]	2.88
COG0242	Peptide deformylase	Translation, ribosomal structure and biogenesis [J]	0.96
COG2503	Predicted secreted acid phosphatase	General function prediction only [R]	0.96
COG3555	Aspartyl/asparaginyl beta-hydroxylase, cupin superfamily	Posttranslational modification, protein turnover, chaperones [O]	0.96
COG3700	Acid phosphatase, class B	Inorganic ion transport and metabolism [P]	0.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.38 %
All Organisms	root	All Organisms	39.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.38 %
Viruses	superkingdom	All Organisms → Viruses	28.30 %
cellular organisms	root	All Organisms → cellular organisms	11.32 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.38 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	17.92 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	10.38 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	9.43 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	1.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.38 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	17.92 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	10.38 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	6.60 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	1.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.38 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	17.92 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	10.38 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5.66 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.94 %
Methanomada group	clade	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.38 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	17.92 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	10.38 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5.66 %
Cellvibrionales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales	0.94 %
Methanobacteria	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.38 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	17.92 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	8.49 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	2.83 %
Methanobacteriales	order	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales	0.94 %
Porticoccaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Porticoccaceae	0.94 %
Methylocystaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.38 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	17.92 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	8.49 %
Rhizobium/Agrobacterium group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group	2.83 %
Methylocystis	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis	0.94 %
Methanobacteriaceae	family	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae	0.94 %
unclassified Porticoccaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Porticoccaceae → unclassified Porticoccaceae	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.38 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	17.92 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	8.49 %
Rhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	2.83 %
unclassified Methylocystis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → unclassified Methylocystis	0.94 %
Methanobrevibacter	genus	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter	0.94 %
Porticoccaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Porticoccaceae → unclassified Porticoccaceae → Porticoccaceae bacterium	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.38 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	17.92 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	8.49 %
Rhizobium leguminosarum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium leguminosarum	2.83 %
unclassified Methanobrevibacter	no rank	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter	0.94 %
Methylocystis sp. WRRC1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → unclassified Methylocystis → Methylocystis sp. WRRC1	0.94 %
Porticoccaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Porticoccaceae → unclassified Porticoccaceae → Porticoccaceae bacterium	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.38 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	17.92 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	8.49 %
Rhizobium leguminosarum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium leguminosarum	2.83 %
Methanobrevibacter sp.	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.	0.94 %
Methylocystis sp. WRRC1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → unclassified Methylocystis → Methylocystis sp. WRRC1	0.94 %
Porticoccaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Porticoccaceae → unclassified Porticoccaceae → Porticoccaceae bacterium	0.94 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003277\|JGI25908J49247_10013025	All Organisms → Viruses → Predicted Viral	2560	Open in IMG/M
3300003277\|JGI25908J49247_10013025	All Organisms → Viruses → Predicted Viral	2560	Open in IMG/M
3300003277\|JGI25908J49247_10027081	All Organisms → Viruses → Predicted Viral	1653	Open in IMG/M
3300003277\|JGI25908J49247_10084319	Not Available	779	Open in IMG/M
3300003393\|JGI25909J50240_1079873	Not Available	656	Open in IMG/M
3300003394\|JGI25907J50239_1096953	Not Available	575	Open in IMG/M
3300003411\|JGI25911J50253_10151959	Not Available	664	Open in IMG/M
3300003411\|JGI25911J50253_10160458	Not Available	640	Open in IMG/M
3300004763\|Ga0007746_1304519	Not Available	709	Open in IMG/M
3300004784\|Ga0007744_1283076	Not Available	519	Open in IMG/M
3300005517\|Ga0070374_10085729	All Organisms → Viruses → Predicted Viral	1641	Open in IMG/M
3300005527\|Ga0068876_10060203	All Organisms → Viruses → Predicted Viral	2302	Open in IMG/M
3300005528\|Ga0068872_10586804	Not Available	592	Open in IMG/M
3300005580\|Ga0049083_10286818	Not Available	551	Open in IMG/M
3300005581\|Ga0049081_10009473	Not Available	3693	Open in IMG/M
3300005581\|Ga0049081_10034915	Not Available	1911	Open in IMG/M
3300005582\|Ga0049080_10030991	All Organisms → Viruses → Predicted Viral	1866	Open in IMG/M
3300005582\|Ga0049080_10071597	Not Available	1188	Open in IMG/M
3300005582\|Ga0049080_10163416	Not Available	743	Open in IMG/M
3300005584\|Ga0049082_10073181	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium leguminosarum	1202	Open in IMG/M
3300005584\|Ga0049082_10136507	Not Available	853	Open in IMG/M
3300005584\|Ga0049082_10283873	Not Available	554	Open in IMG/M
3300005585\|Ga0049084_10255712	All Organisms → cellular organisms → Bacteria	588	Open in IMG/M
3300005805\|Ga0079957_1031247	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3521	Open in IMG/M
3300008107\|Ga0114340_1027713	All Organisms → Viruses → Predicted Viral	4560	Open in IMG/M
3300008108\|Ga0114341_10006089	Not Available	16705	Open in IMG/M
3300008108\|Ga0114341_10356681	Not Available	731	Open in IMG/M
3300008110\|Ga0114343_1177685	All Organisms → Viruses → Predicted Viral	1028	Open in IMG/M
3300008116\|Ga0114350_1016917	Not Available	3097	Open in IMG/M
3300008120\|Ga0114355_1166556	Not Available	759	Open in IMG/M
3300008259\|Ga0114841_1200038	Not Available	722	Open in IMG/M
3300008259\|Ga0114841_1216579	Not Available	671	Open in IMG/M
3300008261\|Ga0114336_1029183	Not Available	3077	Open in IMG/M
3300008262\|Ga0114337_1030655	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	3080	Open in IMG/M
3300008266\|Ga0114363_1002582	Not Available	10818	Open in IMG/M
3300008266\|Ga0114363_1173174	Not Available	693	Open in IMG/M
3300008267\|Ga0114364_1084499	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.	1030	Open in IMG/M
3300008267\|Ga0114364_1125764	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	753	Open in IMG/M
3300008267\|Ga0114364_1188275	Not Available	520	Open in IMG/M
3300008448\|Ga0114876_1145863	Not Available	870	Open in IMG/M
3300008450\|Ga0114880_1188071	Not Available	705	Open in IMG/M
3300009159\|Ga0114978_10073543	All Organisms → cellular organisms → Bacteria	2298	Open in IMG/M
3300011010\|Ga0139557_1000811	Not Available	7349	Open in IMG/M
3300011011\|Ga0139556_1039188	Not Available	698	Open in IMG/M
3300012012\|Ga0153799_1006023	All Organisms → Viruses → Predicted Viral	2933	Open in IMG/M
3300012013\|Ga0153805_1041254	Not Available	784	Open in IMG/M
3300012017\|Ga0153801_1074800	Not Available	595	Open in IMG/M
3300012666\|Ga0157498_1015927	Not Available	1181	Open in IMG/M
3300013004\|Ga0164293_11045409	Not Available	507	Open in IMG/M
3300013372\|Ga0177922_10128035	All Organisms → Viruses → Predicted Viral	1350	Open in IMG/M
3300013372\|Ga0177922_10478763	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium leguminosarum	1049	Open in IMG/M
3300013372\|Ga0177922_10579805	Not Available	805	Open in IMG/M
3300017761\|Ga0181356_1246135	Not Available	511	Open in IMG/M
3300017774\|Ga0181358_1200964	Not Available	652	Open in IMG/M
3300017774\|Ga0181358_1200964	Not Available	652	Open in IMG/M
3300017777\|Ga0181357_1075973	All Organisms → Viruses → Predicted Viral	1289	Open in IMG/M
3300017777\|Ga0181357_1092821	All Organisms → Viruses → Predicted Viral	1148	Open in IMG/M
3300017777\|Ga0181357_1235681	Not Available	641	Open in IMG/M
3300017778\|Ga0181349_1008916	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	4188	Open in IMG/M
3300017778\|Ga0181349_1225696	Not Available	636	Open in IMG/M
3300017780\|Ga0181346_1031416	Not Available	2198	Open in IMG/M
3300017780\|Ga0181346_1243333	Not Available	631	Open in IMG/M
3300017780\|Ga0181346_1324867	Not Available	516	Open in IMG/M
3300017784\|Ga0181348_1021784	All Organisms → Viruses → Predicted Viral	2730	Open in IMG/M
3300017784\|Ga0181348_1220533	Not Available	669	Open in IMG/M
3300017785\|Ga0181355_1226211	Not Available	725	Open in IMG/M
3300017785\|Ga0181355_1278474	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Porticoccaceae → unclassified Porticoccaceae → Porticoccaceae bacterium	634	Open in IMG/M
3300019784\|Ga0181359_1012267	All Organisms → cellular organisms → Archaea → Euryarchaeota	3096	Open in IMG/M
3300019784\|Ga0181359_1025990	All Organisms → Viruses → Predicted Viral	2243	Open in IMG/M
3300020172\|Ga0211729_10185519	Not Available	738	Open in IMG/M
3300020205\|Ga0211731_10300371	Not Available	2863	Open in IMG/M
3300022190\|Ga0181354_1050796	All Organisms → Viruses → Predicted Viral	1381	Open in IMG/M
3300022190\|Ga0181354_1069316	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1170	Open in IMG/M
3300022407\|Ga0181351_1028230	Not Available	2382	Open in IMG/M
3300022407\|Ga0181351_1042322	All Organisms → Viruses → Predicted Viral	1921	Open in IMG/M
3300023184\|Ga0214919_10419108	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	860	Open in IMG/M
3300024560\|Ga0256306_1149576	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	536	Open in IMG/M
3300024568\|Ga0255238_1163770	Not Available	523	Open in IMG/M
3300024569\|Ga0255243_1014957	Not Available	1991	Open in IMG/M
3300026567\|Ga0256303_1075500	Not Available	720	Open in IMG/M
3300027468\|Ga0209247_1042890	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	646	Open in IMG/M
3300027586\|Ga0208966_1018586	Not Available	2044	Open in IMG/M
3300027586\|Ga0208966_1191035	Not Available	526	Open in IMG/M
3300027608\|Ga0208974_1000980	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	11375	Open in IMG/M
3300027608\|Ga0208974_1077794	All Organisms → cellular organisms → Bacteria	912	Open in IMG/M
3300027621\|Ga0208951_1002676	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	7193	Open in IMG/M
3300027659\|Ga0208975_1003967	Not Available	5596	Open in IMG/M
3300027688\|Ga0209553_1111874	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium leguminosarum	971	Open in IMG/M
3300027732\|Ga0209442_1088703	Not Available	1263	Open in IMG/M
3300027732\|Ga0209442_1143005	Not Available	927	Open in IMG/M
3300027756\|Ga0209444_10110087	Not Available	1110	Open in IMG/M
3300027782\|Ga0209500_10270421	Not Available	732	Open in IMG/M
3300027797\|Ga0209107_10127541	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1326	Open in IMG/M
3300027816\|Ga0209990_10062770	All Organisms → Viruses → Predicted Viral	1864	Open in IMG/M
3300027836\|Ga0209230_10449078	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	735	Open in IMG/M
3300031758\|Ga0315907_10124762	All Organisms → Viruses → Predicted Viral	2195	Open in IMG/M
3300031857\|Ga0315909_10014748	Not Available	8061	Open in IMG/M
3300031857\|Ga0315909_10102025	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2468	Open in IMG/M
3300031857\|Ga0315909_10810191	Not Available	591	Open in IMG/M
3300031963\|Ga0315901_10364955	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → unclassified Methylocystis → Methylocystis sp. WRRC1	1170	Open in IMG/M
3300032050\|Ga0315906_10319092	All Organisms → Viruses → Predicted Viral	1390	Open in IMG/M
3300032093\|Ga0315902_10853641	Not Available	709	Open in IMG/M
3300032093\|Ga0315902_10960083	Not Available	648	Open in IMG/M
3300032116\|Ga0315903_10910681	Not Available	627	Open in IMG/M
3300034022\|Ga0335005_0226725	Not Available	1145	Open in IMG/M
3300034068\|Ga0334990_0175712	Not Available	1170	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	100.00%

Habitat	Taxonomy	Distribution
Lentic	Environmental → Aquatic → Freshwater → Lentic	54.72%
Lake	Environmental → Aquatic → Freshwater → Lake	31.13%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	8.49%
River	Environmental → Aquatic → Freshwater → River	3.77%
Ice	Environmental → Aquatic → Freshwater → Ice	1.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	53.77%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	31.13%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	8.49%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	3.77%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	1.89%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	0.94%

Habitat	Taxonomy	Distribution
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	37.74%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	15.09%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	14.15%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	8.49%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	7.55%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	3.77%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	3.77%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	1.89%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	1.89%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater And Sediment	0.94%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater And Sediment	0.94%
Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Lake	0.94%
Freshwater, Surface Ice	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Surface Ice	0.94%
Surface Ice	Environmental → Aquatic → Freshwater → Ice → Unclassified → Surface Ice	0.94%
Freshwater	Environmental → Aquatic → Freshwater → Ice → Unclassified → Freshwater	0.94%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003277	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SD	Environmental	Open in IMG/M
3300003393	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.DD	Environmental	Open in IMG/M
3300003394	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SN	Environmental	Open in IMG/M
3300003411	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.SD	Environmental	Open in IMG/M
3300004763	Metatranscriptome of freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.DD (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004784	Metatranscriptome of freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.SN (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005517	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (version 4)	Environmental	Open in IMG/M
3300005527	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel5S_2200h metaG	Environmental	Open in IMG/M
3300005528	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel1S_2200h metaG	Environmental	Open in IMG/M
3300005580	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG MI27MSRF	Environmental	Open in IMG/M
3300005581	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF	Environmental	Open in IMG/M
3300005582	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF	Environmental	Open in IMG/M
3300005584	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG HU45MSRF	Environmental	Open in IMG/M
3300005585	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ON33MSRF	Environmental	Open in IMG/M
3300005805	Microbial and algae communities from Cheney Reservoir in Wichita, Kansas, USA	Environmental	Open in IMG/M
3300008107	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0046-3-NA	Environmental	Open in IMG/M
3300008108	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0048-C-NA	Environmental	Open in IMG/M
3300008110	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0048-3-NA	Environmental	Open in IMG/M
3300008116	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0106-3-NA	Environmental	Open in IMG/M
3300008120	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0108-3-NA	Environmental	Open in IMG/M
3300008259	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0132-C-NA	Environmental	Open in IMG/M
3300008261	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0024-C-NA	Environmental	Open in IMG/M
3300008262	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0046-C-NA	Environmental	Open in IMG/M
3300008266	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample HABS-E2014-0108-C-NA	Environmental	Open in IMG/M
3300008267	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0024-100-LTR	Environmental	Open in IMG/M
3300008448	Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - August 4, 2014 all contigs	Environmental	Open in IMG/M
3300008450	Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - Oct 27, 2014 all contigs	Environmental	Open in IMG/M
3300009159	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG	Environmental	Open in IMG/M
3300011010	Freshwater microbial communities from Western Basin Lake Erie, Ontario, Canada - Station 970 - Surface Ice	Environmental	Open in IMG/M
3300011011	Freshwater microbial communities from Western Basin Lake Erie, Ontario, Canada - Station 970 - Top - Depth 1m	Environmental	Open in IMG/M
3300012012	Freshwater microbial communities from Eastern Basin Lake Erie, Ontario, Canada - Station 879 - Top - Depth 1m	Environmental	Open in IMG/M
3300012013	Freshwater microbial communities from Eastern Basin Lake Erie, Ontario, Canada - Station 67 - Surface Ice	Environmental	Open in IMG/M
3300012017	Freshwater microbial communities from Central Basin Lake Erie, Ontario, Canada - Station 1208 - Top - Depth 1m	Environmental	Open in IMG/M
3300012666	Freshwater microbial communities from Central Basin Lake Erie, Ontario, Canada - Station 1208 - Surface Ice version 2	Environmental	Open in IMG/M
3300013004	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES118 metaG	Environmental	Open in IMG/M
3300013372	Freshwater microbial communities from Lake Erie, Ontario, Canada. Combined Assembly of 10 SPs	Environmental	Open in IMG/M
3300017761	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.N	Environmental	Open in IMG/M
3300017774	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.D	Environmental	Open in IMG/M
3300017777	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.D.N	Environmental	Open in IMG/M
3300017778	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.S.D	Environmental	Open in IMG/M
3300017780	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.D.N	Environmental	Open in IMG/M
3300017784	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.D.N	Environmental	Open in IMG/M
3300017785	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.D.N	Environmental	Open in IMG/M
3300019784	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.D	Environmental	Open in IMG/M
3300020172	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_102 megahit1	Environmental	Open in IMG/M
3300020205	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_103 megahit1	Environmental	Open in IMG/M
3300022190	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.N	Environmental	Open in IMG/M
3300022407	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.S.D	Environmental	Open in IMG/M
3300023184	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1503	Environmental	Open in IMG/M
3300024560	Metatranscriptome of freshwater microbial communities from Columbia River, Oregon, United States - Colum_Law_RepC_8d (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300024568	Metatranscriptome of freshwater microbial communities from Columbia River, Oregon, United States - Colum_Miss_RepA_8d (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300024569	Metatranscriptome of freshwater microbial communities from Columbia River, Oregon, United States - Colum_Atlam_RepB_8d (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300026567	Metatranscriptome of freshwater microbial communities from Columbia River, Oregon, United States - Colum_Miss_RepC_8d (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300027468	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM110.DN (SPAdes)	Environmental	Open in IMG/M
3300027586	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG HU45MSRF (SPAdes)	Environmental	Open in IMG/M
3300027608	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF (SPAdes)	Environmental	Open in IMG/M
3300027621	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG MI27MSRF (SPAdes)	Environmental	Open in IMG/M
3300027659	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF (SPAdes)	Environmental	Open in IMG/M
3300027688	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.DN (SPAdes)	Environmental	Open in IMG/M
3300027732	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.DD (SPAdes)	Environmental	Open in IMG/M
3300027756	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.DN (SPAdes)	Environmental	Open in IMG/M
3300027782	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027797	Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB hypolimnion July 2011 (SPAdes)	Environmental	Open in IMG/M
3300027816	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel5S_2200h metaG (SPAdes)	Environmental	Open in IMG/M
3300027836	Freshwater and sediment microbial communities from Lake Ontario - Sta 18 epilimnion Metagenome (SPAdes)	Environmental	Open in IMG/M
3300031758	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA123	Environmental	Open in IMG/M
3300031857	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA125	Environmental	Open in IMG/M
3300031963	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA116	Environmental	Open in IMG/M
3300032050	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA122	Environmental	Open in IMG/M
3300032093	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA117	Environmental	Open in IMG/M
3300032116	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA119	Environmental	Open in IMG/M
3300034022	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Apr2018-rr0058	Environmental	Open in IMG/M
3300034068	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME13Apr2016-rr0031	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25908J49247_100130255	3300003277	Freshwater Lake	MKVNIELQSEQVDAIVLQELQRVLEQRIRNYINDDQWCGDIRKEDRKLIKSLRRAIAYFMDHEDFLNYIDELEWPVGMEPTQKGN*
JGI25908J49247_100130256	3300003277	Freshwater Lake	MKVNIELESEQVDAIVLRELQRVLEQNIQDYINKINVCDTRKEHRKLIKSLRRAVAYFMVREDFLEYMDELEWPVGDEEDKYEW*
JGI25908J49247_100270813	3300003277	Freshwater Lake	MKVSIELEAEQVDAIVLQELQRVLEQNISDYINKINVCDTRKEHRKLIKSFRRAVAYFMVHEDFLDYMDELXWPVGDEEDKYEW*
JGI25908J49247_100843193	3300003277	Freshwater Lake	MKVNIELQSEQVDAIVLQELQHALESNIRYYIGEVKVCESRKEHRKLIKSLRRAVAYFMVHEDFLEYMDELEWPVGDEEDKYEW*
JGI25909J50240_10798732	3300003393	Freshwater Lake	MKVSIELEAEQVDAIVLQELQRVLEQNISDYINKINVCDTRKEHRKLIKSFRRAVAYFMVRKLIKSFRRAVAYFMVHEDFLDYMDELSWPVGDEEDKYEW*
JGI25907J50239_10969531	3300003394	Freshwater Lake	ESEQVDAIVLRELQRVLEQNIQDYINKINVCDTRKEHRKLIKSLRRAVAYFMVREDFLEYMDELEWPVGDEEDKYEW*
JGI25911J50253_101519591	3300003411	Freshwater Lake	MKVSIELEAEQVDAIVLQELQRVLEQNISDYINKINVCDTRKEHRKLIKSFRRAVAYFMVHEDFLDYMDELSWPVGDEEDKYEW*
JGI25911J50253_101604582	3300003411	Freshwater Lake	MKVNIELQSEQVDAIVLQELQHALESNIRDYISEFSVCETRKEHRKLIKSLRRTVAYFMVHEDFLDYMDELEWPVGDEEDKYEW*
Ga0007746_13045192	3300004763	Freshwater Lake	MKVSIELESEQVDAIVLQELQRVLEQNIQDYINKINVCDTRKEHRKLIKSLRRAVAYFMVREDFLEYMDELEWPVGDEEDKYEW*
Ga0007744_12830762	3300004784	Freshwater Lake	MKVSIELEAEQVDAIVLKELQRVLEQNISDYINKINVCDTRKEHRKLIKSFRRAVAYFMVHEDFLDYMDELSWPVGDEEDKYEW*
Ga0070374_100857293	3300005517	Freshwater Lake	MKVSIELESEQVDAIVLQEIQKALESNIQDYINKVMVCETRKEHRKLIKSLRRTVAYFMVHEDFLDYMDELSWPVGDEEDKYEW*
Ga0068876_100602035	3300005527	Freshwater Lake	MIDISEINRWKKETKMKVNIELESEQVDDIVIQELQRVLEQNIQDYINKINVCDTRKEHRKLIKSLRRAVAYFMVREDFLEYMDELEWPVGDEEDKYEW*
Ga0068872_105868042	3300005528	Freshwater Lake	MKVNIELESEQVDAIVLRELQRVLEQNIQDYINKINVCDTRKEHRKLIKSLRRAVAYFMVHEDFLDYMDELEWPVGDEEDKYEW*
Ga0049083_102868181	3300005580	Freshwater Lentic	MKVSIELESEQVDAIVLQEIQKALESNIQDYINKVMVCETRKEHRKLIKSLRRTVAYFMVHEDFLDYMDELAWPVGDEEDKYEW*
Ga0049081_100094733	3300005581	Freshwater Lentic	MDKETKMKVSIELEAEQVDAIVLQELQRVLEQNISDYINKINVCDTRKEHRKLIKSFRRAVAYFMVHEDFLDYMDELSWPVGDEEDKYEW*
Ga0049081_100349153	3300005581	Freshwater Lentic	MKVNIELESEQVDDIVIQELQRVLEQNIQDYINKINVCDTRKEHRKLIKSLRRAVAYFMVREDFLEYMDELEWPVGDEEDKYEW*
Ga0049080_100309911	3300005582	Freshwater Lentic	MKVNIELESEQVDDIVLQELQRVLEQNIQDYINKINVCDTRKEHRKLIKSLRRAVAYFMVREDFLEYMDELEWP
Ga0049080_100715972	3300005582	Freshwater Lentic	MKVNIELQSEQVDAIVLQELQRVLEQRIRNYINDDQWCGDIRKEDRKLIKSFRRAVAYFMDHEDFLNYIDGLEWPVGMEPTQKGN*
Ga0049080_101634162	3300005582	Freshwater Lentic	MKVNIELQSEQVDAIVLQELQHALESNIRYYIGEVKVCKTRKEHRKLIKSLRRAVAYFMVHEDFLDYMDELEWPVGDEEDKYEW*
Ga0049082_100731814	3300005584	Freshwater Lentic	MKVSIELESEQVDAIVLHEIQRALESNIQDYINKVMVCDTRKEHRKLIKSLRRTVAYFMVHEDFLDYMDELEWPVGDEEDKYEW*
Ga0049082_101365074	3300005584	Freshwater Lentic	MKVSIELESEQVDAIVLHEIQRALESNIQDYINKVMVCETRKEHRKLIKSLRRTVAYFMVHEDFLDYMDELAWPVGDEEDKYEW*
Ga0049082_102838733	3300005584	Freshwater Lentic	MKVSIELEAEQVDAIVLQELQRVLEQNISDYINKINVCDTRKEHRKLIKSFRRAVAYFMVHEDFLDYMDELEWPVGDEEDKYEW*
Ga0049084_102557121	3300005585	Freshwater Lentic	IVLQELQRVLEQNIQDYINKINVCDTRKEHRKLIKSLRRAVAYFMVREDFLEYMDELEWPVGDEEDKYEW*
Ga0079957_10312471	3300005805	Lake	MKVSIELESEQVDAIVLQELQHALESNIRDYINKINVCDTRKEHRKLIKSFRRAVAYFMVHEDFLDYMDELEWPVGD
Ga0114340_102771316	3300008107	Freshwater, Plankton	LRQNSYYNNMIDISEINRWKKETKMKVNIELESEQVDAIVLQELQRVLEQNIQDYISEVKVCETRKEHRKLIKSLRRAVAYFMVREDFLDYMDELEWPVGDEEDKYEW*
Ga0114341_1000608932	3300008108	Freshwater, Plankton	MIDISEINRWKKETKMKVNIELESEQVDDIVIQELQRVLEQNIQDYINKINVCDTRKEHRKLIKSLRRAVAYFMVHEDFLDYMDELEWPVGDEEDKYEW*
Ga0114341_103566813	3300008108	Freshwater, Plankton	QVDAIVLQELQRVLEQNIQDYINKINVCDTRKEHRKLIKSLRRAVAYFMVHEDFLDYMDELEWPVGDEEDKYAW*
Ga0114343_11776852	3300008110	Freshwater, Plankton	LISNKKETKMKVNIELESEQVDDIVIQELQRVLEQNIQDYINKINVCDTRKEHRKLIKSLRRAVAYFMVREDFLEYMDELEWPVGDEEDKYEW*
Ga0114350_10169175	3300008116	Freshwater, Plankton	MIDISEINRWKKETKMKVNIELESEQVDDIVIQELQRVLEQNIQDYINKINVCETRKEHRKLIKSLRRTVAYFMVHEDFLDYMDELEWPVGDEEDKYEW*
Ga0114355_11665561	3300008120	Freshwater, Plankton	KVNIELESEQVDDIVIQELQRVLEQNIQDYINKINVCDTRKEHRKLIKSLRRAVAYFMVREDFLEYMDELEWPVGDEEDKYEW*
Ga0114841_12000381	3300008259	Freshwater, Plankton	LEQNIQDYINKINVCDTRKEHRKLIKSLRRAVAYFMVHEDFLDYMDELEWPVGDEEDKYEW*
Ga0114841_12165793	3300008259	Freshwater, Plankton	KVNIELESEQVDDIVIQELQRVLEQNIQDYINKINVCDTRKEHRKLIKSLRRAVAYFMVHEDFLDYMDELEWPVGDEEDKYEW*
Ga0114336_10291833	3300008261	Freshwater, Plankton	MKVNIELQSEQVDAIVLQELQRVLEQNIQDYINKINVCDTRKEHRKLIKSLRRAVAYFMVREDFLEYMDELEWPVGDEEDKYEW*
Ga0114337_10306553	3300008262	Freshwater, Plankton	MKVNIELESEQVDAIVLQELQRVLEQNIQDYISEVKVCETRKEHRKLIKSLRRAVAYFMVHEDFLDYMDELEWPVGDEEDKYEW*
Ga0114363_100258220	3300008266	Freshwater, Plankton	MKVNIELESEQVDAIVLQELQRVLEQNIQDYINKINVCDTRKEHRKLIKSLRRAVAYFMVREDFLEYMDELEWPVGDEEDKYEW*
Ga0114363_11731743	3300008266	Freshwater, Plankton	QRKKETKMKVNIELQSEQVDAIVLQELQHALESNIRDYIGEVKVCETRKEHRKLIKSLRRTVAYFMVHEDFLDYMDELEWPVGDEEDKYEW*
Ga0114364_10844992	3300008267	Freshwater, Plankton	MKVNIELESEQVDDIVIQELQRVLEQNIQDYINKINVCDTRKEHRKLIKSLRRAVAYFMVHEDFLDYMDELEWPVGDEEDKYEW*
Ga0114364_11257641	3300008267	Freshwater, Plankton	VLEQNIQDYISEVKVCETRKEHRKLIKSLRRAVAYFMVHEDFLDYMDELEWPVGDEEDKYEW*
Ga0114364_11882752	3300008267	Freshwater, Plankton	MKVNIELQSEQVDAIVLRELQRVLEQNIQDYISEVKVCETRKEHRKLIKSLRRAVAYFMVREDFLEYMDELEWPVGDEEDKYEW*
Ga0114876_11458633	3300008448	Freshwater Lake	MKVNIELESEQVDDIVLQELQRVLEQNIQDYISEVKVCETRKEHRKLIKSLRRAVAYFMVREDFLEYMDELEWPVGDEEDKYEW*
Ga0114880_11880711	3300008450	Freshwater Lake	LQRVLEQNIQDYINKINVCDTRKEHRKLIKSLRRAVAYFMVHEDFLDYMDELEWPVGDEEDKYEW*
Ga0114978_100735432	3300009159	Freshwater Lake	MKVSIELESEQVDAIVLQELQNALETNIRNYISEVSVCETRKEHRKLIKSLRRTVAYFMVHEDFLDYMDELEWPVGDEEDKYEW*
Ga0139557_10008114	3300011010	Freshwater	MKVNIELESEQVDAIVLQELQRVLEQNISDYINKINVCDTRKEHRKLIKSFRRAVAYFMVHEDFLDYMDELSWPVGDEEDKYEW*
Ga0139556_10391881	3300011011	Freshwater	LQRVLEQNISDYINKINVCDTRKEHRKLIKSFRRAVAYFMVHEDFLDYMDELSWPVGDEEDKYEW*
Ga0153799_10060232	3300012012	Freshwater	MKVNIELESEQVDAIVLQELQRVLEQRIRNYINDDQWCGDIRKEDRKLIKSFRRAVAYFMDHEDFLNYIDGLEWPVGMEPTQKGN*
Ga0153805_10412541	3300012013	Surface Ice	RVLEQNIQDYINKINVCDTRKEHRKLIKSLRRAVAYFMVREDFLEYMDELEWPVGDEEDKYEW*
Ga0153801_10748002	3300012017	Freshwater	MKVNIELQSEQVDAIVLQELQRVLEQNIRNYINDDQWCGDIRKEHRKLIKSFRRAVAYFMDHEDFLNYMDKLEWTMKIS*
Ga0157498_10159272	3300012666	Freshwater, Surface Ice	MDKETKMKVSIELEAEQVDAIVLQELQRVLEQNIRDYINKINVCDTRKEHRKLIKSLRRAVAYFMVREDFLEYMDELEWPVGDEEDKYEW*
Ga0164293_110454091	3300013004	Freshwater	MKVSIELEAEQVDAIVLQELQHALESNIRDYINKINVCDTRKEHRKLIKSFRRAVAYFMVHEDFVDYMDELEWPVGDEEYKYVW*
Ga0177922_101280354	3300013372	Freshwater	MKVNIELESEQVDDIVLQELQRVLEQNIQDYINKINVCDTRKEHRKLIKSLRRAVAYFMVREDFLEYMDELEWPVGDEEDKYEW*
Ga0177922_104787634	3300013372	Freshwater	MDKETKMKVSIELEAEQVDAIVLQELQRVLEQNISDYINKINVCDTRKEHRKLIKSFRRAVAYFMVHEDFLDYMDELEWPVGDEEDKYEW*
Ga0177922_105798051	3300013372	Freshwater	MDLNGLSAWNQHKKETEMKVNIELESEQVDAIVLRELQRVLEQNIQDYINKINVCDTRKEHRKLIKSLRRAVAYFMVREDFLEYMDELEWPVGDEEDKYEW*
Ga0181356_12461351	3300017761	Freshwater Lake	MKVSIELEAEQVDAIVLQELQRVLEQNISDYINKINVCDTRKEHRKLIKSLRRAVAYFMVREDFLEYMDELEWPVG
Ga0181358_12009641	3300017774	Freshwater Lake	MKVNIELQSEQVDAIVLRELQRVLEQNIQDYISEVKVCETRKEHRKLIKSLRRTVAYFMVHEDFLDYMDELEWPVGD
Ga0181358_12009642	3300017774	Freshwater Lake	MKVNIELESEQVDDIVLQELQRVLEQRIRNYINDDQWCGDIRKEDRKLIKSLRRAIAYFMDHEDFLNYIDELEWPVGMEPTQKGN
Ga0181357_10759733	3300017777	Freshwater Lake	MKVSIELESEQVDAIVLQELQRVLEQNISDYINKINVCDTRKEHRKLIKSFRRAVAYFMDHEDFLNYIDGLEWPVGMEPTQ
Ga0181357_10928214	3300017777	Freshwater Lake	KKETKMKVSIELEAEQVDAIVLQELQRVLEQNIRDYIGEVKVCETRKEHRKLIKSLRRTVAYFMVHEDFLDYMDELEWPVGDEEDKYEW
Ga0181357_12356813	3300017777	Freshwater Lake	LQELQRVLEQNISDYINKINVCDTRKEHRKLIKSFRRAVAYFMVHEDFLDYMDELEWPVGDEEDKYEW
Ga0181349_10089162	3300017778	Freshwater Lake	MKVSIELEAEQVDAIVLQELQRVLEQNISDYINKINVCDTRKEHRKLIKSFRRAVAYFMVHEDFLDYMDEL
Ga0181349_12256961	3300017778	Freshwater Lake	MKVSIELESEQVDAIVLQELQRVLEQNISDYINKINVCDTRKEHRKLIKSLRRTVAYFMVHEDFLDYMDELEWPVGDEEDKYEW
Ga0181346_10314161	3300017780	Freshwater Lake	MKTSIELQSEQVDSIVLQELQNALETNIRDYISKLMVCETRKEHRKLIKSLRRTVAYFMVHEDFLDYMDELEWP
Ga0181346_12433332	3300017780	Freshwater Lake	MKVSIELEAEQVDAIVLQELQRVLEQNIRDYIGEVKVCETRKEHRKLIKSLRRAVAYFMVHEDFLDYMDELEWPVGDEEDKYEW
Ga0181346_13248671	3300017780	Freshwater Lake	NIQDYINKINVCDTRKEHRKLIKSLRRTVAYFMVHEDFLDYMDELEWPVGDEEDKYEWXYDDQDRI
Ga0181348_10217843	3300017784	Freshwater Lake	MKVSIELEAEQVDAIVLQELQRVLEQNIRDYIGEVKVCETRKEHRKLIKSLRRTVAYFMVHEDFLDYMDELEWPVGDEEDKYEW
Ga0181348_12205332	3300017784	Freshwater Lake	MKVSIELESEQVDAIVLQELQHALESNIRDYINKINVCDTRKEHRKLIKSFRRAVAYFMVHEDFLDYMDELSWPVGDEEDKYEW
Ga0181355_12262112	3300017785	Freshwater Lake	MDLNGLSAWNQHKKETEMKVNIELESEQVDAIVLRELQRVLEQNIQDYINKINVCDTRKEHRKLIKSLRRAVAYFMVREDFLEYMDELEWPVGDEEDKYEW
Ga0181355_12784741	3300017785	Freshwater Lake	MKVSIELESEQVDAIVLQELQRVLEQNISDYINKINVCDTRKEHRKLIKSFRRAVAYFMVHEDFLDYMDELSWPVGDEEDKYEW
Ga0181359_10122672	3300019784	Freshwater Lake	MKVNIELQSEQVDAIVLQELQHALESNIRYYIGEVKVCKTRKEHRKLIKSLRRAVAYFMVHEDFLDYMDELEWPVGDEEDKYEW
Ga0181359_10259901	3300019784	Freshwater Lake	MKVSIELEAEQVDAIVLQELQRVLEQNISDYINKINVCDTRKEHRKLIKSFRRAVAYFMVHEDFLDYMDELEWPVGDEEDKYEW
Ga0211729_101855191	3300020172	Freshwater	MKVNIELQSEQVDAIVLQELQRVLEQNIRNYINDDQWCGDIRKEDRKLIKSFRRAVAYFMDHEDFLNYIDGLEWPVGMEPTQKGN
Ga0211731_103003711	3300020205	Freshwater	MKVNIELQSEQVDAIVLRELQRVLEQNIQDYINKINVCDTRKEHRKLIRSLRRAVAYFMVHEDFLDYMDELEWPVGDEEDKYEW
Ga0181354_10507961	3300022190	Freshwater Lake	MKVSIELEAEQVDAIVLQELQRVLEQNIQDYINKINVCDTRKEHRKLIKSLRRAVAYFMVREDFLEYMDELEWPVGDEEDKYEW
Ga0181354_10693162	3300022190	Freshwater Lake	MKTSIELQSEQVDSIVLQELQNALETNIRDYISKLMVCETRKEHRKLIKSLRRTVAYFMVHEDFLDYMDELEWPVGDEEDKYEW
Ga0181351_10282306	3300022407	Freshwater Lake	MKVNIELQSEQVDAIVLQELQRVLEQRIRNYINDDQWCGDIRKEDRKLIKSLRRAIAYFMDHEDFLNYIDELEWPVGMEPTQKGN
Ga0181351_10423224	3300022407	Freshwater Lake	MKVNIELQSEQVDAIVLRELQRVLEQNIQDYISEVKVCETRKEHRKLIKSLRRAVAYFMVREDFLEYMDELEWPVGDEEDKYEW
Ga0214919_104191081	3300023184	Freshwater	MKVSIELESEQVDAIVLHEIQKALETNIQDYINKINVCDTRKEHRKLIKSLRRTVAYFMVHEDFLDYMDELAWPVGDEEDKYEW
Ga0256306_11495762	3300024560	Freshwater	MKVNIELESEQVDAIVLRELQRALETNIQDYINKINVCDTRKEHRKLIKSLRRTVAYFMVHEDFLDYMDELEWPVGDEEDKYEW
Ga0255238_11637701	3300024568	Freshwater	ELQNALETNIRDYISKLMVCETRKEHRKLIKSLRRTVAYFMVHEDFLDYMDELEWPVGDEEDKYEW
Ga0255243_10149573	3300024569	Freshwater	MKVSIELEAEQVDAIVLQELQRVLEQNISDYINKINVCDTRKEHRKLIKSLRRTVAYFMVHEDFLDYMDELEWPVGDEEDKYEW
Ga0256303_10755002	3300026567	Freshwater	MKVNIELESEQVDAIVLQELQRVLEQNISDYINKINVCDTRKEHRKLIKSFRRAVAYFMVHEDFLDYMDELEWPVGDEEDKYEW
Ga0209247_10428901	3300027468	Freshwater Lake	MKVSIELEAEQVDAIVLKELQRVLEQNISDYINKINVCDTRKEHRKLIKSFRRAVAYFMVHEDFLDYMDELSWPVGDEED
Ga0208966_10185861	3300027586	Freshwater Lentic	MKVSIELESEQVDAIVLHEIQRALESNIQDYINKVMVCDTRKEHRKLIKSLRRTVAYFMVHEDFLDYMDELEWPVGDEEDKYEW
Ga0208966_11910351	3300027586	Freshwater Lentic	MKVSIELESEQVDAIVLHEIQRALESNIQDYINKVMVCETRKEHRKLIKSLRRTVAYFMVHEDFLDYMDELAWPVGDEEDKYEW
Ga0208974_100098035	3300027608	Freshwater Lentic	MKVNIELQSEQVDAIVLQELQHALESNIRDYISEFSVCETRKEHRKLIKSLRRTVAYFMVHEDFLDYMDELEWPVGDEEDKYEW
Ga0208974_10777941	3300027608	Freshwater Lentic	MIDTLGIDRWKKETKMKVNIELQSEQVDAIVLQELQRVLEQNIQDYINKINVCDTRKEHRKLIKSLRRAVAYFMVHEDFLDYMDELEWPVGDEED
Ga0208951_10026767	3300027621	Freshwater Lentic	MKVSIELEAEQVDAIVLKELQRVLEQNISDYINKINVCDTRKEHRKLIKSFRRAVAYFMVHEDFLDYMDELSWPVGDEEDKYEW
Ga0208975_10039672	3300027659	Freshwater Lentic	MIDISEINRWKKETKMKVNIELESEQVDDIVIQELQRVLEQNIQDYINKINVCDTRKEHRKLIKSLRRAVAYFMVREDFLEYMDELEWPVGDEEDKYEW
Ga0209553_11118744	3300027688	Freshwater Lake	LEAEQVDAIVLKELQRVLEQNISDYINKINVCDTRKEHRKLIKSFRRAVAYFMVHEDFLDYMDELSWPVGDEEDKYEW
Ga0209442_10887034	3300027732	Freshwater Lake	MKVSIELEAEQVDAIVLQELQRVLEQNISDYINKINVCDTRKEHRKLIKSFRRAVAYFMVHEDFLDYMDELAWPVGDEEDKYEW
Ga0209442_11430051	3300027732	Freshwater Lake	QVDAIVLQELQHALESNIRDYISEFSVCETRKEHRKLIKSLRRTVAYFMVHEDFLDYMDELEWPVGDEEDKYEW
Ga0209444_101100871	3300027756	Freshwater Lake	ELQRVLEQNISDYINKINVCDTRKEHRKLIKSFRRAVAYFMVHEDFLDYMDELSWPVGDEEDKYEW
Ga0209500_102704213	3300027782	Freshwater Lake	MKVSIELESEQVDAIVLQELQNALETNIRNYISEVSVCETRKEHRKLIKSLRRTVAYFMVHEDFLDYMDELEWPVGDEEDKYEW
Ga0209107_101275411	3300027797	Freshwater And Sediment	MKVNIELESEQVDDIVLQELQRVLEQNIQDYINKINVCDTRKEHRKLIKSLRRAVAYFMVREDFLEYMDELE
Ga0209990_100627704	3300027816	Freshwater Lake	MKVNIELESEQVDDIVIQELQRVLEQNIQDYINKINVCDTRKEHRKLIKSLRRAVAYFMVREDFLEYMDELEWPVGDEEDKYEW
Ga0209230_104490783	3300027836	Freshwater And Sediment	MDKETKMKVSIELEAEQVDAIVLQELQRVLEQNISDYINKINVCDTRKEHRKLIKSFRRAVAYFMVHEDFLDYMDELEWPVGDEEDKYEW
Ga0315907_101247621	3300031758	Freshwater	MKVNIELESEQVDDIVIQELQRVLEQNIQDYINKINVCETRKEHRKLIKSLRRTVAYFMVHEDFLDYMDELEWPVGDEEDKYEW
Ga0315909_1001474814	3300031857	Freshwater	MIDTLGIDRWKKETKMKVNIELQSEQVDAIVLQELQRVLEQNIQDYINKINVCDTRKEHRKLIKSLRRAVAYFMVHEDFLDYMDELEWPVGDEEDKYEW
Ga0315909_101020258	3300031857	Freshwater	ETKMKVNIELESEQVDDIVIQELQRVLEQNIQDYINKINVCDTRKEHRKLIKSLRRAVAYFMVREDFLEYMDELEWPVGDEEDKYEW
Ga0315909_108101913	3300031857	Freshwater	MKVNIELESEQVDAIVLQELQRVLEQNIQDYISEVKVCETRKEHRKLIKSLRRAVAYFMVHEDFLDYMDELEWPVGDEEDKYDW
Ga0315901_103649554	3300031963	Freshwater	MKVNIELESEQVDAIVLRELQRVLEQNIQDYINKINVCDTRKEHRKLIKSLRRAVAYFMVHEDFLDYMDELEWPVGDEEDKYEW
Ga0315906_103190921	3300032050	Freshwater	MIDTLGIDRWKKETKMKVNIELQSEQVDAIVLQELQRVLEQNIQDYINKINVCDTRKEHRKLIKSLRRAVAYFMVHEDFLDYMDELEWPVGDEEDKY
Ga0315902_108536411	3300032093	Freshwater	LQRVLEQNIQDYINKINVCDTRKEHRKLIKSLRRAVAYFMVHEDFLDYMDELEWPVGDEEDKYEW
Ga0315902_109600831	3300032093	Freshwater	TKMKVNIELESEQVDDIVIQELQRVLEQNIQDYINKINVCETRKEHRKLIKSLRRTVAYFMVHEDFLDYMDELEWPVGDEEDKYEW
Ga0315903_109106812	3300032116	Freshwater	AIVLQELQRVLEQNIQDYINKINVCDTRKEHRKLIKSLRRAVAYFMVHEDFLDYMDELEWPVGDEEDKYEW
Ga0335005_0226725_105_359	3300034022	Freshwater	MKVSIELEAEQVDAIVLQELQRVLEQNISDYINKINVCDTRKEHRKLIKSFRRAVAYFMVHEDFLDYMDELSWPVGDEEDKYEW
Ga0334990_0175712_219_473	3300034068	Freshwater	MKVSIELEAEQVDAIVLQELQRVLEQNISDYINKINVCDTRKEHRKLIKSFRRAVAYFMVHEDFVDYMDELEWPVGDEEYKYVW

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F093234

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences