NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F093117

Metagenome / Metatranscriptome Family F093117

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F093117
Family Type Metagenome / Metatranscriptome
Number of Sequences 106
Average Sequence Length 54 residues
Representative Sequence DTETAKLDLPNMQNRKPEAIKRYLEFRLQQFKMLLDAVEDYVEEKYPATGGHS
Number of Associated Samples 86
Number of Associated Scaffolds 106

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 15.38 %
% of genes near scaffold ends (potentially truncated) 16.98 %
% of genes from short scaffolds (< 2000 bps) 20.75 %
Associated GOLD sequencing projects 81
AlphaFold2 3D model prediction Yes
3D model pTM-score0.52

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (75.472 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland
(26.415 % of family members)
Environment Ontology (ENVO) Unclassified
(61.321 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Water (non-saline)
(54.717 % of family members)



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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 39.51%    β-sheet: 0.00%    Coil/Unstructured: 60.49%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.52
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 106 Family Scaffolds
PF02586SRAP 11.32
PF04664OGFr_N 4.72
PF07676PD40 3.77
PF02810SEC-C 2.83
PF00589Phage_integrase 1.89
PF13751DDE_Tnp_1_6 1.89
PF03466LysR_substrate 1.89
PF03734YkuD 0.94
PF06114Peptidase_M78 0.94
PF13490zf-HC2 0.94
PF02838Glyco_hydro_20b 0.94
PF14534DUF4440 0.94
PF00691OmpA 0.94
PF13546DDE_5 0.94
PF00872Transposase_mut 0.94
PF00271Helicase_C 0.94
PF13620CarboxypepD_reg 0.94
PF03572Peptidase_S41 0.94
PF14659Phage_int_SAM_3 0.94
PF13857Ank_5 0.94
PF13432TPR_16 0.94
PF00072Response_reg 0.94

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 106 Family Scaffolds
COG2135ssDNA abasic site-binding protein YedK/HMCES, SRAP familyReplication, recombination and repair [L] 11.32
COG0793C-terminal processing protease CtpA/Prc, contains a PDZ domainPosttranslational modification, protein turnover, chaperones [O] 0.94
COG1376Lipoprotein-anchoring transpeptidase ErfK/SrfKCell wall/membrane/envelope biogenesis [M] 0.94
COG3034Murein L,D-transpeptidase YafKCell wall/membrane/envelope biogenesis [M] 0.94
COG3328Transposase (or an inactivated derivative)Mobilome: prophages, transposons [X] 0.94
COG3525N-acetyl-beta-hexosaminidaseCarbohydrate transport and metabolism [G] 0.94


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A75.47 %
All OrganismsrootAll Organisms24.53 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300006059|Ga0075017_100218078All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1385Open in IMG/M
3300009518|Ga0116128_1006290All Organisms → cellular organisms → Bacteria4425Open in IMG/M
3300009623|Ga0116133_1001507All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium6633Open in IMG/M
3300009628|Ga0116125_1015013All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1928Open in IMG/M
3300009634|Ga0116124_1069416All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae1016Open in IMG/M
3300009635|Ga0116117_1104273All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae712Open in IMG/M
3300009640|Ga0116126_1179669All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans692Open in IMG/M
3300009764|Ga0116134_1046371All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1675Open in IMG/M
3300010341|Ga0074045_10701118All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium643Open in IMG/M
3300010341|Ga0074045_10754831All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium616Open in IMG/M
3300012205|Ga0137362_10189247All Organisms → cellular organisms → Bacteria → Acidobacteria1770Open in IMG/M
3300016750|Ga0181505_10318995All Organisms → cellular organisms → Bacteria → Acidobacteria771Open in IMG/M
3300017929|Ga0187849_1362635All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 41-28533Open in IMG/M
3300017940|Ga0187853_10043167All Organisms → cellular organisms → Bacteria → Acidobacteria2342Open in IMG/M
3300017996|Ga0187891_1105309All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1059Open in IMG/M
3300018016|Ga0187880_1385586All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium588Open in IMG/M
3300018019|Ga0187874_10163704All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium936Open in IMG/M
3300018024|Ga0187881_10191318All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium875Open in IMG/M
3300018034|Ga0187863_10130373All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae1404Open in IMG/M
3300018035|Ga0187875_10764574All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium506Open in IMG/M
3300018040|Ga0187862_10024942All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium4604Open in IMG/M
3300019787|Ga0182031_1403665All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1821Open in IMG/M
3300025498|Ga0208819_1071819All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae764Open in IMG/M
3300025612|Ga0208691_1032279All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1211Open in IMG/M
3300027635|Ga0209625_1010696All Organisms → cellular organisms → Bacteria → Acidobacteria1996Open in IMG/M
3300032898|Ga0335072_10504210All Organisms → cellular organisms → Bacteria1253Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland26.42%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland24.53%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil6.60%
Bog Forest SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil4.72%
BogEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Bog3.77%
SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Soil3.77%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil2.83%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil2.83%
PalsaEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa2.83%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil2.83%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment1.89%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds1.89%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa1.89%
BogEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Bog1.89%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog0.94%
Iron-Sulfur Acid SpringEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring0.94%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil0.94%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil0.94%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.94%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.94%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.94%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland0.94%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Soil0.94%
PermafrostEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost0.94%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil0.94%
FenEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Fen0.94%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000567Peat soil microbial communities from Weissenstadt, Germany - SII-2010EnvironmentalOpen in IMG/M
3300004080Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3EnvironmentalOpen in IMG/M
3300004092Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300004635Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3EnvironmentalOpen in IMG/M
3300005995Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050EnvironmentalOpen in IMG/M
3300006059Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012EnvironmentalOpen in IMG/M
3300009518Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_150EnvironmentalOpen in IMG/M
3300009519Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_150EnvironmentalOpen in IMG/M
3300009614Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_150EnvironmentalOpen in IMG/M
3300009623Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10EnvironmentalOpen in IMG/M
3300009628Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_10EnvironmentalOpen in IMG/M
3300009629Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_100EnvironmentalOpen in IMG/M
3300009634Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_150EnvironmentalOpen in IMG/M
3300009635Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_10EnvironmentalOpen in IMG/M
3300009637Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_40EnvironmentalOpen in IMG/M
3300009639Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_40EnvironmentalOpen in IMG/M
3300009640Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_40EnvironmentalOpen in IMG/M
3300009665Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10EnvironmentalOpen in IMG/M
3300009759Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_10EnvironmentalOpen in IMG/M
3300009760Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_100EnvironmentalOpen in IMG/M
3300009762Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_40EnvironmentalOpen in IMG/M
3300009764Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40EnvironmentalOpen in IMG/M
3300009824Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaGEnvironmentalOpen in IMG/M
3300010339Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3EnvironmentalOpen in IMG/M
3300010341Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2EnvironmentalOpen in IMG/M
3300010343Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1EnvironmentalOpen in IMG/M
3300010379Sb_50d combined assemblyEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300014489Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaGEnvironmentalOpen in IMG/M
3300014491Permafrost microbial communities from Stordalen Mire, Sweden - 612S2D metaGEnvironmentalOpen in IMG/M
3300014492Permafrost microbial communities from Stordalen Mire, Sweden - 612S2M metaGEnvironmentalOpen in IMG/M
3300014493Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaGEnvironmentalOpen in IMG/M
3300014495Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaGEnvironmentalOpen in IMG/M
3300014501Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300014657Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaGEnvironmentalOpen in IMG/M
3300016750Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300017924Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5EnvironmentalOpen in IMG/M
3300017929Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_100EnvironmentalOpen in IMG/M
3300017940Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100EnvironmentalOpen in IMG/M
3300017972Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300017995Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1EnvironmentalOpen in IMG/M
3300017996Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_40EnvironmentalOpen in IMG/M
3300018002Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_40EnvironmentalOpen in IMG/M
3300018008Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_40EnvironmentalOpen in IMG/M
3300018013Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_100EnvironmentalOpen in IMG/M
3300018016Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_40EnvironmentalOpen in IMG/M
3300018017Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_40EnvironmentalOpen in IMG/M
3300018019Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_150EnvironmentalOpen in IMG/M
3300018020Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_100EnvironmentalOpen in IMG/M
3300018024Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_100EnvironmentalOpen in IMG/M
3300018026Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_100EnvironmentalOpen in IMG/M
3300018030Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100EnvironmentalOpen in IMG/M
3300018034Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10EnvironmentalOpen in IMG/M
3300018035Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10EnvironmentalOpen in IMG/M
3300018037Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10EnvironmentalOpen in IMG/M
3300018040Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150EnvironmentalOpen in IMG/M
3300018042Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10EnvironmentalOpen in IMG/M
3300018057Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150EnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300019787Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (PacBio error correction)EnvironmentalOpen in IMG/M
3300020022Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s2EnvironmentalOpen in IMG/M
3300020581Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-MEnvironmentalOpen in IMG/M
3300022557Paint Pots_combined assemblyEnvironmentalOpen in IMG/M
3300022881Peat soil microbial communities from Stordalen Mire, Sweden - 717 P1 20-24EnvironmentalOpen in IMG/M
3300025419Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_100 (SPAdes)EnvironmentalOpen in IMG/M
3300025496Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_40 (SPAdes)EnvironmentalOpen in IMG/M
3300025498Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_150 (SPAdes)EnvironmentalOpen in IMG/M
3300025500Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40 (SPAdes)EnvironmentalOpen in IMG/M
3300025501Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_150 (SPAdes)EnvironmentalOpen in IMG/M
3300025612Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10 (SPAdes)EnvironmentalOpen in IMG/M
3300026538Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)EnvironmentalOpen in IMG/M
3300027635Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300028788Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E2_2EnvironmentalOpen in IMG/M
3300028879Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_3EnvironmentalOpen in IMG/M
3300029922III_Fen_E1 coassemblyEnvironmentalOpen in IMG/M
3300030520III_Palsa_N2 coassemblyEnvironmentalOpen in IMG/M
3300030879Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZU1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031090Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031524Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3EnvironmentalOpen in IMG/M
3300032160Sb_50d combined assembly (MetaSPAdes)EnvironmentalOpen in IMG/M
3300032898Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1EnvironmentalOpen in IMG/M
3300033402Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MNEnvironmentalOpen in IMG/M
3300033405Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MYEnvironmentalOpen in IMG/M
3300033798Peat soil microbial communities from Stordalen Mire, Sweden - 713 E-3-SEnvironmentalOpen in IMG/M
3300033824Peat soil microbial communities from Stordalen Mire, Sweden - 714 S2 5-9EnvironmentalOpen in IMG/M
3300033887Peat soil microbial communities from Stordalen Mire, Sweden - 713 P-1-X1EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12270J11330_1017647323300000567Peatlands SoilETATLDLPHMENRKPEAIKRYLEFRLEQFKILLNAVEDYVEEKYPTTGGHS*
Ga0062385_1034918013300004080Bog Forest SoilQNRKPEAIKRYLEFRLRQFKMLLDAVEDYVGEKYPAAGGNS*
Ga0062389_10267457423300004092Bog Forest SoilRKPEAIKRYLEFRLQQFKMLLDTVEDYVAEKYPATGGHS*
Ga0062388_10207905723300004635Bog Forest SoilAMLDLPHMQNRKPEAIKRYLGFRLRQFKMLLDAVEEYVGEKYPATGGHS*
Ga0066790_1038774423300005995SoilLPHMQNRKPEAIKRYLEFRLRQFNMLLDAVEDYVGEKYPATGEHS*
Ga0075017_10021807833300006059WatershedsLDSLDSAFADFDTETAMLDLPHMQNRKPEAIKRYLEFRLRQFKMLLDAVEDYVGEKYPATGGHS*
Ga0075017_10072833713300006059WatershedsLDSAFADFDTETTMLDLPHMKNRKPEAIKCYLEFRLRQFRMLLDEVENYLEEKHPATGGHS*
Ga0116128_100629023300009518PeatlandVLDSLDSAFADFDTETAMLDLPHMQNRKPEAIKHYLEFRLQQFKMLLDAVQDYVDEKCPATGGHS*
Ga0116128_108344913300009518PeatlandLDTAFADFDSETAKLDLPHMQNRKPEAIKRYLEFRMKQFKLLLDTVEDYVEEKYPATGGHA*
Ga0116108_113792613300009519PeatlandLDSAFADFDTETAKLDLPNMQNRKPEAIKRYLEFRLQQFKMLLDTVEDYVGEKYPATGGHS*
Ga0116104_102432013300009614PeatlandTAELDLPHMQNRKPEAIKHYLELRLKQFKLLLDAVEDFVGEKYPATGGHS*
Ga0116133_100150733300009623PeatlandLDSAFADFDTETAKLDLPNMQNRKPEAIKRYLEFRLQQFKMLLDAVEDYVEEKYPATGGHS*
Ga0116133_117215313300009623PeatlandRKPEAIKRYLEFRLQQFRMLLDTVEDYVAEKYPATGGHS*
Ga0116125_101501323300009628PeatlandLDSAFADFDTETAKLDLPNMQNRKPEAIKRYLEFRLQQFKMLLDAVEDYVEEKFPATGGHS*
Ga0116119_104422013300009629PeatlandKLDLPHMENRKPEAIKRYLEFRIRQFKMLLDAVEDYVGEKYPATGGHS*
Ga0116124_106941613300009634PeatlandVLDSLDSAFADFDTETAKLDLPNMQNRKPEAIKRYLEFRLQQFKMLLDTVEDYVAEKYPA
Ga0116117_110427323300009635PeatlandVLDSLDNAFADFDTETAKLDLPNMQNRKPEAIKRYLEFRLQQFKMLLDAVEDYVEEKYPATGGHS*
Ga0116118_126055813300009637PeatlandDFDSETAKLDLPHMQNRKPGDIRRYLEFRVKQFKLLLDTVEDYVEEKYPTTGGHA*
Ga0116122_104407813300009639PeatlandHMQNRKPEAIKRYLEFRLQQFKMLLDTVEDYVAEKYPATGGHS*
Ga0116122_122024413300009639PeatlandMQNRKPEAIKRYLEFRLQQFKMLLDTVEDYVGEKYPATGGHS*
Ga0116126_117966923300009640PeatlandLDSLDSAFADFDTETAKLDLPHMQNRKPEAIKRYLEFRLRQFKVLLDAVEDYVEEKYPATGGHS*
Ga0116135_105661813300009665PeatlandNAFADFDTETAKLDLPNMQNRKPEAIKRYLEFRLQQFKMLLDAVEDYVEEKYPATGGHS*
Ga0116101_110759123300009759PeatlandFADFDTETAKLDLPNMQNRKPEAIKRYLEFRLQQFKMLLDTVEDYVAEKYPATEGHS*
Ga0116131_110717123300009760PeatlandMSAKLDLPNMQNRKLEAIKRYLEFRLQQFKMLLDAVEDYVEEKYPATGGHS*
Ga0116131_120134713300009760PeatlandDNAFADADTETAKLDLPHMRDRKPEAIKDYLQFHLRQIKLLLDAVDDYLDEKHPRPEGHA
Ga0116130_102203543300009762PeatlandLPHMENRKPEAIKRYLEFRLRQFRMLIDAVEDYVEEKYPATGGHS*
Ga0116130_105990013300009762PeatlandLDLPHMQERKPEAIKRCLETRLRQVQLLLDAVEDYVDEKYPATGGHA*
Ga0116134_104637123300009764PeatlandVLDSLDSAFADFDTETAKLDLPNMQNRKPEAIKRYLEFRLQQFKMLLDAVEDYVEEKYPATGGHS*
Ga0116219_1082618423300009824Peatlands SoilDLPHMQNRKPAGIKSYLEFRLRQFKLLLAAVEDYAEEKYPPTGGHS*
Ga0074046_1004435343300010339Bog Forest SoilVDSAFADFDTETAMLDLPHMQNRKPEAIKRYLEFRLRQFKMLLDAVEGYVEEKYPATGGHS*
Ga0074045_1070111823300010341Bog Forest SoilYLTRVLDSLDNAFADFDSATAMLDLPHMQNRKPEAIKRYLEFRLRQFKMLLEAVEDCIEEKYPATGGHS*
Ga0074045_1075483113300010341Bog Forest SoilRVLDSLDSAFADFDTETAMLDLPHMQNRKPEAIKRYLEFRLRQFKMLLDAVEDYVEEKYPATGGHS*
Ga0074044_1014086913300010343Bog Forest SoilTETAKLDLPNMQNRKPEAIKRYLEFRLQQFKMLLDAVADYVEEKYPATGGYS*
Ga0074044_1035877823300010343Bog Forest SoilDTETAMLDLPHMQNRKPEAINRYLEFRLRQFKMLLDAVEEYVGEKYPSTGGHS*
Ga0136449_10046101113300010379Peatlands SoilMLDLPHMQNRKPEAIKRYLEFRLRQFKMLLDAVEDYVEEKFPAAGGHS*
Ga0136449_10052012113300010379Peatlands SoilMLDLPHMQNRKPEAIKRYLEFRLRQFKMLLDAVEDYVEEKYPATGGHS*
Ga0136449_10134513923300010379Peatlands SoilLDSAFADFDDETAKLDLPHMQNRKPEAIKRYLEFRLRQFKMLLEAVEDYVEEQYPATGGHS*
Ga0136449_10445365623300010379Peatlands SoilLDSAFADFDTETAKLDLPNMQNRKPEAIKRYLEFRLQQFKMLLDAVEDYVEEKFPATGG
Ga0137362_1018924713300012205Vadose Zone SoilAFADFDTETATLDLPHMQNRKPEAIKRYLEFRLRQFTMLLDTVGDYVEEKYPATGGHS*
Ga0182018_1005523733300014489PalsaLILPSCFIVPTKNRKPEAIKRYLEFRLRQFKMLLDAVEDYVGEKYPATGGHS*
Ga0182018_1045680413300014489PalsaTETATLDLPHMENRKPEAIKRYLEFRLQQFKMLIDAVEDYVEEKYPPLGEQS*
Ga0182014_1005075323300014491BogMLDLPHMQNRKPEAIKRYLEFRLRQFKMLLDAVEDYVEAKYPATGGHS*
Ga0182013_1001263123300014492BogMLDLPNMQNRKPEAIKRYLEFRLRQFKMLIDAVEDFVEEKYPATGGRS*
Ga0182016_1034768513300014493BogPSNVYLEFRLRQFRMLLDVVEDYVGEQYPATGGHS*
Ga0182015_1058969713300014495PalsaAIKRYLEFRLRQFKMLLDAVEDYVEEKFPSTGGHS*
Ga0182024_1030930743300014501PermafrostLDLPNMQNRKPEAIKRYLEFRLQQFRMLLDTVEDYVAEKYPATRGHS*
Ga0181522_1008782913300014657BogETAKLDLPHMQNPETIKGFLTFRLQQFRMLLNAVEGYVEEKYPATGGHS*
Ga0181505_1031899513300016750PeatlandTRVLDSLDSAFADFDTETAKLDLPHMQNHKPEAIKRYLEFRLQQFKMLLDAVEDYVGEKYPATGGHS
Ga0187820_113968413300017924Freshwater SedimentMLDLPHMQNRKPEAIKRYLEFRLRQFKMLLDAVEDYVGEKYPATGGHS
Ga0187849_136263513300017929PeatlandVLDSLDSAFADFDTETAMLDLPHMQNRKPEAIKHYLEFRLQQFKMLLDAVQDYVDEKCPATGGHS
Ga0187853_1004316733300017940PeatlandVLDSLDSAFADFDTETAKLDLPNMQNRKPEAIKRYLEFRLQQFKMLLDAVEDYVEEKYPATGGHS
Ga0187781_1115557613300017972Tropical PeatlandLDLPHMQGRKPEAIKQYLEFRLRQVKLLLDAVEDYVDEKHPVTGGNA
Ga0187816_1029731223300017995Freshwater SedimentLDSAFADFDAKTAMLDLPHMQNRRPEAIKGYLEFRLQQLRMLFDAVEDYVEEKYPPTGGH
Ga0187891_110530923300017996PeatlandRVLDSLDNGFADFDTETATLDLPHMQNRKPEAIKRYLEFRLQQFKMLLDTVEDYVAEKYPATGGHS
Ga0187868_127775213300018002PeatlandEAIKSYLEFRLRQFKLLLEAVEDYVEEKYPATGGHS
Ga0187888_113389923300018008PeatlandMQNRKPEAIKRYLEFRLRQFKVLLDAVEDYVEEKYPATGGHS
Ga0187873_100376453300018013PeatlandAFADFDTETAKLDLPNMQNRKPEAIKRYLEFRLQQFKMLLEAVEDYAEDQHPATGGHS
Ga0187880_138558613300018016PeatlandKRYLTRVLDSLDSAFADFDTETAKLDLPNMQNRKPEAIKRYLEFRLQQFKMLIDAVEDYIEEKFPATGGHS
Ga0187872_1005926843300018017PeatlandPEAIKRYLEFRLQQFKMLLDTVEDYVAEKYPATGGHS
Ga0187874_1008240523300018019PeatlandSLDSAFADFDTETAKLDLPNMQNRKPEAIKRYLEFRLQQFKMLLEAVEDYAEDQHPATGGHS
Ga0187874_1016370433300018019PeatlandDFDTETAKLDLPNMQNRKPEAIKRYLEFRLQQFKMLLDAVEDYVEEKYPATGGHS
Ga0187861_1008875813300018020PeatlandMQNRKPEAIKRYLEFRLQQFKMLLDTVEDYVGEKYPATGGHS
Ga0187881_1008463813300018024PeatlandDLPHMQNRKPEAIKRYLEFRLQQFKMLLDTVEDYVAEKYPATGGHS
Ga0187881_1019131833300018024PeatlandLDSLDSAFADFDTETAKLDLPNMQNRKPEAIKRYLEFRLQQFKMLLDAVEDYVEEKYPATGGHS
Ga0187857_1009052233300018026PeatlandSMQNRKPEAIKRYLEFRLQQFKMLLDTVEDYVGEKYPATGGHS
Ga0187869_1009350833300018030PeatlandLDLPSMQNRKPEAIKRYLEFRLQQFKMLLDTVEDYVGEKYPATGGHS
Ga0187869_1025336213300018030PeatlandNMQNRKPEAIKRYLEFRLQQFKMLLEAVEDYAEDQHPATGGHS
Ga0187863_1013037323300018034PeatlandVLDSLDAAFADLDTETAKLDLPHMQNHKPEAIKGYLEFRLQQFRMLLNAVEGYVEEKHPATGGHS
Ga0187863_1080357713300018034PeatlandETAKLDLPNMQNRKPEAIKRYLEFRLQQFKMLLDTVEDYVAEKYPATGGHS
Ga0187875_1076457413300018035PeatlandLDSLDNAFADFDTETAKLDLPNMQNRKPEAIKRYLEFRLQQFKMLLDTVEDYVGEKYPATGGHS
Ga0187883_1013118733300018037PeatlandTETAKLDLPNMQNRKPEAIKRYLEFRLQQFKMLLDTVEDYVAEKYPATEGHS
Ga0187862_1002494213300018040PeatlandVLDSLDSAFADFDTETAKLDLPNMQNRKPEAIKRYLEFRLRQFKMLIDAVEDYVEEKFPA
Ga0187862_1031522033300018040PeatlandFADFDTETAMLDLPHMQNRKPEAIKRYLEFRLRQFRMLLETIEDYVGEKYPATGGHS
Ga0187871_1002762153300018042PeatlandADLDTETAKLDLPHMQNHKPEAIKGYLGFRLQQFRMLLNAVEGYVEEKYPATGGHS
Ga0187858_1033677123300018057PeatlandETAKLDLPNMQNRKPDAIKRYLEFRLQQFKMLLDTVEDYVADKYPATGGHS
Ga0187858_1041887113300018057PeatlandLDLPHMQNRKPEAIKRYLEFRLRQFKMLLDAVEDYVEEQHPVTGGHS
Ga0066667_1116060623300018433Grasslands SoilSAFADFDTETAKLDLPHMQDRKPEAIKRYLEFRRHQLKMLLEAVEDYVEEKYPPTGGHS
Ga0182031_140366533300019787BogMLDLPHMQNRKPEAIKRYLEFRLRQFKMLLDAVEDYVEAKYPATGGHS
Ga0193733_113019313300020022SoilAFADLDTETAMLDLPHMQNRKPEAIKRYLEFRLWQFKRLLDAVEDYVHEKYPTTGGHS
Ga0210399_1122647213300020581SoilEAIKRYLEFRLRQFKMLLDAVEDYVGEKYPATGGHS
Ga0212123_1063440513300022557Iron-Sulfur Acid SpringDNAFADFDTETAKLDLPNMQNRKPEAIKRYLEFRLQQFKMLLDAVEDYVEEKYPATGGHS
Ga0224545_102838023300022881SoilFADFDTETARLDLPHMQNRKPEAIKRYLEFRREQLRMLLNTIEDYVEERYPATGGHS
Ga0208036_103583323300025419PeatlandDNAFADFDTETAKLDLPHMENRKPEAIKRYLEFRIRQFKMLLDAVEDYVGEKYPATGGHS
Ga0208191_107559923300025496PeatlandFDTETAKLDLPNMQNRKPEAIKRYLEFRLQQFKMLLEAVEDYAEDQHPATGGHS
Ga0208819_107181923300025498PeatlandTRVLDSLDNAFADFDTETAKLDLPHMENRKPEAIKRYLEFRIRQFKMLLDAVEDYVGEKYPATGGHS
Ga0208686_100525133300025500PeatlandMLDLPSMQNRKPEAIKRYLEFRLQQFKMLLDTVEDYVGEKYPATGGHS
Ga0208563_105451413300025501PeatlandLDSAFANFDTETAQLDLPHMRNRKPEAIKRYLEFRREQFKMLLEVIEDFIEEKYPAQEDILG
Ga0208691_103227913300025612PeatlandVLDSLDNAFADFDTETAKLDLPNMQNRKPEAIKRYLEFRLQQFKMLLDAVEDYVEEKYPATGGHS
Ga0208691_111095013300025612PeatlandDAAFADLDTETAKLDLPHMQNPETIKGFLTFRLQQFRMLLNAVEGYVEEKYPATGGHS
Ga0209056_1002683083300026538SoilFADFDTETAMLDLPHMQNRKPEAIKRYLEFRLRQFKMLLDAVEDYVEEKYPATGGHS
Ga0209625_101069613300027635Forest SoilARVLDSLDSAFADFDTETAKLDLPHMQSRRPEAIKRYLEFRLRQVKMLIEAVEDYVEERYPARGGHS
Ga0302189_1037550013300028788BogLDLPHMQNRKPEAIERYLEFRLRQFKMLLDAVEDYVEEKFPATGGHS
Ga0302229_1018723913300028879PalsaDTETATLDLPHMQNHKPEAIKRYLECRLQQFKMLLDTVEDYVAEKYPATGGHS
Ga0311363_1052414723300029922FenMLDLPHMQNRKPEAIERYLEFRLRQFKMLLDAVEDYVEEKFPATGGHS
Ga0311372_1292826523300030520PalsaDTETAKLDLPNMQNRKPEAIKRYLEFRLQQFKMLLDAVEDYVEEKYPATGGHS
Ga0265765_101681723300030879SoilSLDNGFADFDTETAMLDLPNMQNRKPEAIKRYLEFRLQQFKMLLDTVEDFVAEKYPATGGHS
Ga0265760_1001974213300031090SoilADFDTETAMLDLPHMQNRKPDAIKRYLEFRRQQFEMLLDAVEDYVVEKYPATGGHS
Ga0302320_1002088973300031524BogMLDLPNMQNRKPEAIKRYLEFRLRQFKMLIDAVEDFVEEKYPATGGRS
Ga0311301_1040254213300032160Peatlands SoilADFDTETAMLDLPHMQNRKPEAIKRYLEFRLRQFKMLLDAVEDYVEEKYPATGGHS
Ga0335072_1050421043300032898SoilLDSLDSAFSDFDTETAMLDLPHMQNRKPEAIKRYLEFRLRQFRMLLDAVEEYVGEKYPLTGGHS
Ga0326728_1001570813300033402Peat SoilEAIKRFLEFRLRQFKLLLDAVEDYVEEKHPATGGQA
Ga0326728_1002558063300033402Peat SoilFDSATAKLDLPHMQNRKPEAIKRFLEFRLRQFKLLLDAVEDYVEEKHPATGGHA
Ga0326727_1002451563300033405Peat SoilPEAIKRFLEFRLRQFKLLLDAVEDYVEEKHPATGGHA
Ga0334821_061741_467_6523300033798SoilLDSAFADFDTETAMLDLPHMQNRKPEAIKRYLEFRLRQFKMLLDAVEDYVEEKYPATGGH
Ga0334840_179605_384_5303300033824SoilMLDLPHMQKRKPEAIKHYLEFRLRQFRMLLDEVEDYVEERFPATGGHS
Ga0334790_013079_3964_41073300033887SoilMRNRKPDAIKRYLEFRLQQFKMLLDAVEDYVVEDYVEEKFPATGGHS


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