Basic Information | |
---|---|
Family ID | F093117 |
Family Type | Metagenome / Metatranscriptome |
Number of Sequences | 106 |
Average Sequence Length | 54 residues |
Representative Sequence | DTETAKLDLPNMQNRKPEAIKRYLEFRLQQFKMLLDAVEDYVEEKYPATGGHS |
Number of Associated Samples | 86 |
Number of Associated Scaffolds | 106 |
Quality Assessment | |
---|---|
Transcriptomic Evidence | Yes |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 15.38 % |
% of genes near scaffold ends (potentially truncated) | 16.98 % |
% of genes from short scaffolds (< 2000 bps) | 20.75 % |
Associated GOLD sequencing projects | 81 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.52 |
Hidden Markov Model |
---|
Powered by Skylign |
Most Common Taxonomy | |
---|---|
Group | Unclassified (75.472 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
---|---|
GOLD Ecosystem | Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland (26.415 % of family members) |
Environment Ontology (ENVO) | Unclassified (61.321 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Water (non-saline) (54.717 % of family members) |
⦗Top⦘ |
⦗Top⦘ |
Predicted Topology & Secondary Structure | |||||
---|---|---|---|---|---|
Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 39.51% β-sheet: 0.00% Coil/Unstructured: 60.49% | Feature Viewer |
|
|||||
Powered by Feature Viewer |
Structure Viewer | |
---|---|
| |
Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.52 |
Powered by PDBe Molstar |
⦗Top⦘ |
Pfam ID | Name | % Frequency in 106 Family Scaffolds |
---|---|---|
PF02586 | SRAP | 11.32 |
PF04664 | OGFr_N | 4.72 |
PF07676 | PD40 | 3.77 |
PF02810 | SEC-C | 2.83 |
PF00589 | Phage_integrase | 1.89 |
PF13751 | DDE_Tnp_1_6 | 1.89 |
PF03466 | LysR_substrate | 1.89 |
PF03734 | YkuD | 0.94 |
PF06114 | Peptidase_M78 | 0.94 |
PF13490 | zf-HC2 | 0.94 |
PF02838 | Glyco_hydro_20b | 0.94 |
PF14534 | DUF4440 | 0.94 |
PF00691 | OmpA | 0.94 |
PF13546 | DDE_5 | 0.94 |
PF00872 | Transposase_mut | 0.94 |
PF00271 | Helicase_C | 0.94 |
PF13620 | CarboxypepD_reg | 0.94 |
PF03572 | Peptidase_S41 | 0.94 |
PF14659 | Phage_int_SAM_3 | 0.94 |
PF13857 | Ank_5 | 0.94 |
PF13432 | TPR_16 | 0.94 |
PF00072 | Response_reg | 0.94 |
COG ID | Name | Functional Category | % Frequency in 106 Family Scaffolds |
---|---|---|---|
COG2135 | ssDNA abasic site-binding protein YedK/HMCES, SRAP family | Replication, recombination and repair [L] | 11.32 |
COG0793 | C-terminal processing protease CtpA/Prc, contains a PDZ domain | Posttranslational modification, protein turnover, chaperones [O] | 0.94 |
COG1376 | Lipoprotein-anchoring transpeptidase ErfK/SrfK | Cell wall/membrane/envelope biogenesis [M] | 0.94 |
COG3034 | Murein L,D-transpeptidase YafK | Cell wall/membrane/envelope biogenesis [M] | 0.94 |
COG3328 | Transposase (or an inactivated derivative) | Mobilome: prophages, transposons [X] | 0.94 |
COG3525 | N-acetyl-beta-hexosaminidase | Carbohydrate transport and metabolism [G] | 0.94 |
⦗Top⦘ |
Name | Rank | Taxonomy | Distribution |
Unclassified | root | N/A | 75.47 % |
All Organisms | root | All Organisms | 24.53 % |
Visualization |
---|
Powered by ApexCharts |
Scaffold | Taxonomy | Length | IMG/M Link |
---|---|---|---|
3300006059|Ga0075017_100218078 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 1385 | Open in IMG/M |
3300009518|Ga0116128_1006290 | All Organisms → cellular organisms → Bacteria | 4425 | Open in IMG/M |
3300009623|Ga0116133_1001507 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 6633 | Open in IMG/M |
3300009628|Ga0116125_1015013 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 1928 | Open in IMG/M |
3300009634|Ga0116124_1069416 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae | 1016 | Open in IMG/M |
3300009635|Ga0116117_1104273 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae | 712 | Open in IMG/M |
3300009640|Ga0116126_1179669 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans | 692 | Open in IMG/M |
3300009764|Ga0116134_1046371 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 1675 | Open in IMG/M |
3300010341|Ga0074045_10701118 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 643 | Open in IMG/M |
3300010341|Ga0074045_10754831 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 616 | Open in IMG/M |
3300012205|Ga0137362_10189247 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 1770 | Open in IMG/M |
3300016750|Ga0181505_10318995 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 771 | Open in IMG/M |
3300017929|Ga0187849_1362635 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 41-28 | 533 | Open in IMG/M |
3300017940|Ga0187853_10043167 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 2342 | Open in IMG/M |
3300017996|Ga0187891_1105309 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 1059 | Open in IMG/M |
3300018016|Ga0187880_1385586 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 588 | Open in IMG/M |
3300018019|Ga0187874_10163704 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 936 | Open in IMG/M |
3300018024|Ga0187881_10191318 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 875 | Open in IMG/M |
3300018034|Ga0187863_10130373 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae | 1404 | Open in IMG/M |
3300018035|Ga0187875_10764574 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 506 | Open in IMG/M |
3300018040|Ga0187862_10024942 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 4604 | Open in IMG/M |
3300019787|Ga0182031_1403665 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 1821 | Open in IMG/M |
3300025498|Ga0208819_1071819 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae | 764 | Open in IMG/M |
3300025612|Ga0208691_1032279 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 1211 | Open in IMG/M |
3300027635|Ga0209625_1010696 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 1996 | Open in IMG/M |
3300032898|Ga0335072_10504210 | All Organisms → cellular organisms → Bacteria | 1253 | Open in IMG/M |
⦗Top⦘ |
Habitat | Taxonomy | Distribution |
Peatland | Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland | 26.42% |
Peatland | Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland | 24.53% |
Peatlands Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil | 6.60% |
Bog Forest Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil | 4.72% |
Bog | Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog | 3.77% |
Soil | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil | 3.77% |
Bog Forest Soil | Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil | 2.83% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 2.83% |
Palsa | Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa | 2.83% |
Peat Soil | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil | 2.83% |
Freshwater Sediment | Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment | 1.89% |
Watersheds | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds | 1.89% |
Palsa | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa | 1.89% |
Bog | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog | 1.89% |
Bog | Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog | 0.94% |
Iron-Sulfur Acid Spring | Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring | 0.94% |
Vadose Zone Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil | 0.94% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 0.94% |
Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil | 0.94% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 0.94% |
Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil | 0.94% |
Tropical Peatland | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland | 0.94% |
Soil | Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil | 0.94% |
Permafrost | Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost | 0.94% |
Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil | 0.94% |
Fen | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen | 0.94% |
Visualization |
---|
Powered by ApexCharts |
Taxon OID | Sample Name | Habitat Type | IMG/M Link |
---|---|---|---|
3300000567 | Peat soil microbial communities from Weissenstadt, Germany - SII-2010 | Environmental | Open in IMG/M |
3300004080 | Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3 | Environmental | Open in IMG/M |
3300004092 | Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3 | Environmental | Open in IMG/M |
3300004635 | Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3 | Environmental | Open in IMG/M |
3300005995 | Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050 | Environmental | Open in IMG/M |
3300006059 | Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012 | Environmental | Open in IMG/M |
3300009518 | Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_150 | Environmental | Open in IMG/M |
3300009519 | Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_150 | Environmental | Open in IMG/M |
3300009614 | Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_150 | Environmental | Open in IMG/M |
3300009623 | Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10 | Environmental | Open in IMG/M |
3300009628 | Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_10 | Environmental | Open in IMG/M |
3300009629 | Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_100 | Environmental | Open in IMG/M |
3300009634 | Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_150 | Environmental | Open in IMG/M |
3300009635 | Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_10 | Environmental | Open in IMG/M |
3300009637 | Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_40 | Environmental | Open in IMG/M |
3300009639 | Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_40 | Environmental | Open in IMG/M |
3300009640 | Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_40 | Environmental | Open in IMG/M |
3300009665 | Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10 | Environmental | Open in IMG/M |
3300009759 | Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_10 | Environmental | Open in IMG/M |
3300009760 | Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_100 | Environmental | Open in IMG/M |
3300009762 | Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_40 | Environmental | Open in IMG/M |
3300009764 | Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40 | Environmental | Open in IMG/M |
3300009824 | Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG | Environmental | Open in IMG/M |
3300010339 | Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3 | Environmental | Open in IMG/M |
3300010341 | Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2 | Environmental | Open in IMG/M |
3300010343 | Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1 | Environmental | Open in IMG/M |
3300010379 | Sb_50d combined assembly | Environmental | Open in IMG/M |
3300012205 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG | Environmental | Open in IMG/M |
3300014489 | Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG | Environmental | Open in IMG/M |
3300014491 | Permafrost microbial communities from Stordalen Mire, Sweden - 612S2D metaG | Environmental | Open in IMG/M |
3300014492 | Permafrost microbial communities from Stordalen Mire, Sweden - 612S2M metaG | Environmental | Open in IMG/M |
3300014493 | Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaG | Environmental | Open in IMG/M |
3300014495 | Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG | Environmental | Open in IMG/M |
3300014501 | Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly) | Environmental | Open in IMG/M |
3300014657 | Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG | Environmental | Open in IMG/M |
3300016750 | Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300017924 | Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5 | Environmental | Open in IMG/M |
3300017929 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_100 | Environmental | Open in IMG/M |
3300017940 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100 | Environmental | Open in IMG/M |
3300017972 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG | Environmental | Open in IMG/M |
3300017995 | Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1 | Environmental | Open in IMG/M |
3300017996 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_40 | Environmental | Open in IMG/M |
3300018002 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_40 | Environmental | Open in IMG/M |
3300018008 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_40 | Environmental | Open in IMG/M |
3300018013 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_100 | Environmental | Open in IMG/M |
3300018016 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_40 | Environmental | Open in IMG/M |
3300018017 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_40 | Environmental | Open in IMG/M |
3300018019 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_150 | Environmental | Open in IMG/M |
3300018020 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_100 | Environmental | Open in IMG/M |
3300018024 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_100 | Environmental | Open in IMG/M |
3300018026 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_100 | Environmental | Open in IMG/M |
3300018030 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100 | Environmental | Open in IMG/M |
3300018034 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10 | Environmental | Open in IMG/M |
3300018035 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10 | Environmental | Open in IMG/M |
3300018037 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10 | Environmental | Open in IMG/M |
3300018040 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150 | Environmental | Open in IMG/M |
3300018042 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10 | Environmental | Open in IMG/M |
3300018057 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150 | Environmental | Open in IMG/M |
3300018433 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116 | Environmental | Open in IMG/M |
3300019787 | Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (PacBio error correction) | Environmental | Open in IMG/M |
3300020022 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s2 | Environmental | Open in IMG/M |
3300020581 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M | Environmental | Open in IMG/M |
3300022557 | Paint Pots_combined assembly | Environmental | Open in IMG/M |
3300022881 | Peat soil microbial communities from Stordalen Mire, Sweden - 717 P1 20-24 | Environmental | Open in IMG/M |
3300025419 | Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_100 (SPAdes) | Environmental | Open in IMG/M |
3300025496 | Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_40 (SPAdes) | Environmental | Open in IMG/M |
3300025498 | Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_150 (SPAdes) | Environmental | Open in IMG/M |
3300025500 | Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40 (SPAdes) | Environmental | Open in IMG/M |
3300025501 | Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_150 (SPAdes) | Environmental | Open in IMG/M |
3300025612 | Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10 (SPAdes) | Environmental | Open in IMG/M |
3300026538 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes) | Environmental | Open in IMG/M |
3300027635 | Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M2 (SPAdes) | Environmental | Open in IMG/M |
3300028788 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E2_2 | Environmental | Open in IMG/M |
3300028879 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_3 | Environmental | Open in IMG/M |
3300029922 | III_Fen_E1 coassembly | Environmental | Open in IMG/M |
3300030520 | III_Palsa_N2 coassembly | Environmental | Open in IMG/M |
3300030879 | Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZU1 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300031090 | Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300031524 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3 | Environmental | Open in IMG/M |
3300032160 | Sb_50d combined assembly (MetaSPAdes) | Environmental | Open in IMG/M |
3300032898 | Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1 | Environmental | Open in IMG/M |
3300033402 | Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN | Environmental | Open in IMG/M |
3300033405 | Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY | Environmental | Open in IMG/M |
3300033798 | Peat soil microbial communities from Stordalen Mire, Sweden - 713 E-3-S | Environmental | Open in IMG/M |
3300033824 | Peat soil microbial communities from Stordalen Mire, Sweden - 714 S2 5-9 | Environmental | Open in IMG/M |
3300033887 | Peat soil microbial communities from Stordalen Mire, Sweden - 713 P-1-X1 | Environmental | Open in IMG/M |
Geographical Distribution | |
---|---|
Zoom: | Powered by OpenStreetMap |
⦗Top⦘ |
Protein ID | Sample Taxon ID | Habitat | Sequence |
JGI12270J11330_101764732 | 3300000567 | Peatlands Soil | ETATLDLPHMENRKPEAIKRYLEFRLEQFKILLNAVEDYVEEKYPTTGGHS* |
Ga0062385_103491801 | 3300004080 | Bog Forest Soil | QNRKPEAIKRYLEFRLRQFKMLLDAVEDYVGEKYPAAGGNS* |
Ga0062389_1026745742 | 3300004092 | Bog Forest Soil | RKPEAIKRYLEFRLQQFKMLLDTVEDYVAEKYPATGGHS* |
Ga0062388_1020790572 | 3300004635 | Bog Forest Soil | AMLDLPHMQNRKPEAIKRYLGFRLRQFKMLLDAVEEYVGEKYPATGGHS* |
Ga0066790_103877442 | 3300005995 | Soil | LPHMQNRKPEAIKRYLEFRLRQFNMLLDAVEDYVGEKYPATGEHS* |
Ga0075017_1002180783 | 3300006059 | Watersheds | LDSLDSAFADFDTETAMLDLPHMQNRKPEAIKRYLEFRLRQFKMLLDAVEDYVGEKYPATGGHS* |
Ga0075017_1007283371 | 3300006059 | Watersheds | LDSAFADFDTETTMLDLPHMKNRKPEAIKCYLEFRLRQFRMLLDEVENYLEEKHPATGGHS* |
Ga0116128_10062902 | 3300009518 | Peatland | VLDSLDSAFADFDTETAMLDLPHMQNRKPEAIKHYLEFRLQQFKMLLDAVQDYVDEKCPATGGHS* |
Ga0116128_10834491 | 3300009518 | Peatland | LDTAFADFDSETAKLDLPHMQNRKPEAIKRYLEFRMKQFKLLLDTVEDYVEEKYPATGGHA* |
Ga0116108_11379261 | 3300009519 | Peatland | LDSAFADFDTETAKLDLPNMQNRKPEAIKRYLEFRLQQFKMLLDTVEDYVGEKYPATGGHS* |
Ga0116104_10243201 | 3300009614 | Peatland | TAELDLPHMQNRKPEAIKHYLELRLKQFKLLLDAVEDFVGEKYPATGGHS* |
Ga0116133_10015073 | 3300009623 | Peatland | LDSAFADFDTETAKLDLPNMQNRKPEAIKRYLEFRLQQFKMLLDAVEDYVEEKYPATGGHS* |
Ga0116133_11721531 | 3300009623 | Peatland | RKPEAIKRYLEFRLQQFRMLLDTVEDYVAEKYPATGGHS* |
Ga0116125_10150132 | 3300009628 | Peatland | LDSAFADFDTETAKLDLPNMQNRKPEAIKRYLEFRLQQFKMLLDAVEDYVEEKFPATGGHS* |
Ga0116119_10442201 | 3300009629 | Peatland | KLDLPHMENRKPEAIKRYLEFRIRQFKMLLDAVEDYVGEKYPATGGHS* |
Ga0116124_10694161 | 3300009634 | Peatland | VLDSLDSAFADFDTETAKLDLPNMQNRKPEAIKRYLEFRLQQFKMLLDTVEDYVAEKYPA |
Ga0116117_11042732 | 3300009635 | Peatland | VLDSLDNAFADFDTETAKLDLPNMQNRKPEAIKRYLEFRLQQFKMLLDAVEDYVEEKYPATGGHS* |
Ga0116118_12605581 | 3300009637 | Peatland | DFDSETAKLDLPHMQNRKPGDIRRYLEFRVKQFKLLLDTVEDYVEEKYPTTGGHA* |
Ga0116122_10440781 | 3300009639 | Peatland | HMQNRKPEAIKRYLEFRLQQFKMLLDTVEDYVAEKYPATGGHS* |
Ga0116122_12202441 | 3300009639 | Peatland | MQNRKPEAIKRYLEFRLQQFKMLLDTVEDYVGEKYPATGGHS* |
Ga0116126_11796692 | 3300009640 | Peatland | LDSLDSAFADFDTETAKLDLPHMQNRKPEAIKRYLEFRLRQFKVLLDAVEDYVEEKYPATGGHS* |
Ga0116135_10566181 | 3300009665 | Peatland | NAFADFDTETAKLDLPNMQNRKPEAIKRYLEFRLQQFKMLLDAVEDYVEEKYPATGGHS* |
Ga0116101_11075912 | 3300009759 | Peatland | FADFDTETAKLDLPNMQNRKPEAIKRYLEFRLQQFKMLLDTVEDYVAEKYPATEGHS* |
Ga0116131_11071712 | 3300009760 | Peatland | MSAKLDLPNMQNRKLEAIKRYLEFRLQQFKMLLDAVEDYVEEKYPATGGHS* |
Ga0116131_12013471 | 3300009760 | Peatland | DNAFADADTETAKLDLPHMRDRKPEAIKDYLQFHLRQIKLLLDAVDDYLDEKHPRPEGHA |
Ga0116130_10220354 | 3300009762 | Peatland | LPHMENRKPEAIKRYLEFRLRQFRMLIDAVEDYVEEKYPATGGHS* |
Ga0116130_10599001 | 3300009762 | Peatland | LDLPHMQERKPEAIKRCLETRLRQVQLLLDAVEDYVDEKYPATGGHA* |
Ga0116134_10463712 | 3300009764 | Peatland | VLDSLDSAFADFDTETAKLDLPNMQNRKPEAIKRYLEFRLQQFKMLLDAVEDYVEEKYPATGGHS* |
Ga0116219_108261842 | 3300009824 | Peatlands Soil | DLPHMQNRKPAGIKSYLEFRLRQFKLLLAAVEDYAEEKYPPTGGHS* |
Ga0074046_100443534 | 3300010339 | Bog Forest Soil | VDSAFADFDTETAMLDLPHMQNRKPEAIKRYLEFRLRQFKMLLDAVEGYVEEKYPATGGHS* |
Ga0074045_107011182 | 3300010341 | Bog Forest Soil | YLTRVLDSLDNAFADFDSATAMLDLPHMQNRKPEAIKRYLEFRLRQFKMLLEAVEDCIEEKYPATGGHS* |
Ga0074045_107548311 | 3300010341 | Bog Forest Soil | RVLDSLDSAFADFDTETAMLDLPHMQNRKPEAIKRYLEFRLRQFKMLLDAVEDYVEEKYPATGGHS* |
Ga0074044_101408691 | 3300010343 | Bog Forest Soil | TETAKLDLPNMQNRKPEAIKRYLEFRLQQFKMLLDAVADYVEEKYPATGGYS* |
Ga0074044_103587782 | 3300010343 | Bog Forest Soil | DTETAMLDLPHMQNRKPEAINRYLEFRLRQFKMLLDAVEEYVGEKYPSTGGHS* |
Ga0136449_1004610111 | 3300010379 | Peatlands Soil | MLDLPHMQNRKPEAIKRYLEFRLRQFKMLLDAVEDYVEEKFPAAGGHS* |
Ga0136449_1005201211 | 3300010379 | Peatlands Soil | MLDLPHMQNRKPEAIKRYLEFRLRQFKMLLDAVEDYVEEKYPATGGHS* |
Ga0136449_1013451392 | 3300010379 | Peatlands Soil | LDSAFADFDDETAKLDLPHMQNRKPEAIKRYLEFRLRQFKMLLEAVEDYVEEQYPATGGHS* |
Ga0136449_1044536562 | 3300010379 | Peatlands Soil | LDSAFADFDTETAKLDLPNMQNRKPEAIKRYLEFRLQQFKMLLDAVEDYVEEKFPATGG |
Ga0137362_101892471 | 3300012205 | Vadose Zone Soil | AFADFDTETATLDLPHMQNRKPEAIKRYLEFRLRQFTMLLDTVGDYVEEKYPATGGHS* |
Ga0182018_100552373 | 3300014489 | Palsa | LILPSCFIVPTKNRKPEAIKRYLEFRLRQFKMLLDAVEDYVGEKYPATGGHS* |
Ga0182018_104568041 | 3300014489 | Palsa | TETATLDLPHMENRKPEAIKRYLEFRLQQFKMLIDAVEDYVEEKYPPLGEQS* |
Ga0182014_100507532 | 3300014491 | Bog | MLDLPHMQNRKPEAIKRYLEFRLRQFKMLLDAVEDYVEAKYPATGGHS* |
Ga0182013_100126312 | 3300014492 | Bog | MLDLPNMQNRKPEAIKRYLEFRLRQFKMLIDAVEDFVEEKYPATGGRS* |
Ga0182016_103476851 | 3300014493 | Bog | PSNVYLEFRLRQFRMLLDVVEDYVGEQYPATGGHS* |
Ga0182015_105896971 | 3300014495 | Palsa | AIKRYLEFRLRQFKMLLDAVEDYVEEKFPSTGGHS* |
Ga0182024_103093074 | 3300014501 | Permafrost | LDLPNMQNRKPEAIKRYLEFRLQQFRMLLDTVEDYVAEKYPATRGHS* |
Ga0181522_100878291 | 3300014657 | Bog | ETAKLDLPHMQNPETIKGFLTFRLQQFRMLLNAVEGYVEEKYPATGGHS* |
Ga0181505_103189951 | 3300016750 | Peatland | TRVLDSLDSAFADFDTETAKLDLPHMQNHKPEAIKRYLEFRLQQFKMLLDAVEDYVGEKYPATGGHS |
Ga0187820_11396841 | 3300017924 | Freshwater Sediment | MLDLPHMQNRKPEAIKRYLEFRLRQFKMLLDAVEDYVGEKYPATGGHS |
Ga0187849_13626351 | 3300017929 | Peatland | VLDSLDSAFADFDTETAMLDLPHMQNRKPEAIKHYLEFRLQQFKMLLDAVQDYVDEKCPATGGHS |
Ga0187853_100431673 | 3300017940 | Peatland | VLDSLDSAFADFDTETAKLDLPNMQNRKPEAIKRYLEFRLQQFKMLLDAVEDYVEEKYPATGGHS |
Ga0187781_111555761 | 3300017972 | Tropical Peatland | LDLPHMQGRKPEAIKQYLEFRLRQVKLLLDAVEDYVDEKHPVTGGNA |
Ga0187816_102973122 | 3300017995 | Freshwater Sediment | LDSAFADFDAKTAMLDLPHMQNRRPEAIKGYLEFRLQQLRMLFDAVEDYVEEKYPPTGGH |
Ga0187891_11053092 | 3300017996 | Peatland | RVLDSLDNGFADFDTETATLDLPHMQNRKPEAIKRYLEFRLQQFKMLLDTVEDYVAEKYPATGGHS |
Ga0187868_12777521 | 3300018002 | Peatland | EAIKSYLEFRLRQFKLLLEAVEDYVEEKYPATGGHS |
Ga0187888_11338992 | 3300018008 | Peatland | MQNRKPEAIKRYLEFRLRQFKVLLDAVEDYVEEKYPATGGHS |
Ga0187873_10037645 | 3300018013 | Peatland | AFADFDTETAKLDLPNMQNRKPEAIKRYLEFRLQQFKMLLEAVEDYAEDQHPATGGHS |
Ga0187880_13855861 | 3300018016 | Peatland | KRYLTRVLDSLDSAFADFDTETAKLDLPNMQNRKPEAIKRYLEFRLQQFKMLIDAVEDYIEEKFPATGGHS |
Ga0187872_100592684 | 3300018017 | Peatland | PEAIKRYLEFRLQQFKMLLDTVEDYVAEKYPATGGHS |
Ga0187874_100824052 | 3300018019 | Peatland | SLDSAFADFDTETAKLDLPNMQNRKPEAIKRYLEFRLQQFKMLLEAVEDYAEDQHPATGGHS |
Ga0187874_101637043 | 3300018019 | Peatland | DFDTETAKLDLPNMQNRKPEAIKRYLEFRLQQFKMLLDAVEDYVEEKYPATGGHS |
Ga0187861_100887581 | 3300018020 | Peatland | MQNRKPEAIKRYLEFRLQQFKMLLDTVEDYVGEKYPATGGHS |
Ga0187881_100846381 | 3300018024 | Peatland | DLPHMQNRKPEAIKRYLEFRLQQFKMLLDTVEDYVAEKYPATGGHS |
Ga0187881_101913183 | 3300018024 | Peatland | LDSLDSAFADFDTETAKLDLPNMQNRKPEAIKRYLEFRLQQFKMLLDAVEDYVEEKYPATGGHS |
Ga0187857_100905223 | 3300018026 | Peatland | SMQNRKPEAIKRYLEFRLQQFKMLLDTVEDYVGEKYPATGGHS |
Ga0187869_100935083 | 3300018030 | Peatland | LDLPSMQNRKPEAIKRYLEFRLQQFKMLLDTVEDYVGEKYPATGGHS |
Ga0187869_102533621 | 3300018030 | Peatland | NMQNRKPEAIKRYLEFRLQQFKMLLEAVEDYAEDQHPATGGHS |
Ga0187863_101303732 | 3300018034 | Peatland | VLDSLDAAFADLDTETAKLDLPHMQNHKPEAIKGYLEFRLQQFRMLLNAVEGYVEEKHPATGGHS |
Ga0187863_108035771 | 3300018034 | Peatland | ETAKLDLPNMQNRKPEAIKRYLEFRLQQFKMLLDTVEDYVAEKYPATGGHS |
Ga0187875_107645741 | 3300018035 | Peatland | LDSLDNAFADFDTETAKLDLPNMQNRKPEAIKRYLEFRLQQFKMLLDTVEDYVGEKYPATGGHS |
Ga0187883_101311873 | 3300018037 | Peatland | TETAKLDLPNMQNRKPEAIKRYLEFRLQQFKMLLDTVEDYVAEKYPATEGHS |
Ga0187862_100249421 | 3300018040 | Peatland | VLDSLDSAFADFDTETAKLDLPNMQNRKPEAIKRYLEFRLRQFKMLIDAVEDYVEEKFPA |
Ga0187862_103152203 | 3300018040 | Peatland | FADFDTETAMLDLPHMQNRKPEAIKRYLEFRLRQFRMLLETIEDYVGEKYPATGGHS |
Ga0187871_100276215 | 3300018042 | Peatland | ADLDTETAKLDLPHMQNHKPEAIKGYLGFRLQQFRMLLNAVEGYVEEKYPATGGHS |
Ga0187858_103367712 | 3300018057 | Peatland | ETAKLDLPNMQNRKPDAIKRYLEFRLQQFKMLLDTVEDYVADKYPATGGHS |
Ga0187858_104188711 | 3300018057 | Peatland | LDLPHMQNRKPEAIKRYLEFRLRQFKMLLDAVEDYVEEQHPVTGGHS |
Ga0066667_111606062 | 3300018433 | Grasslands Soil | SAFADFDTETAKLDLPHMQDRKPEAIKRYLEFRRHQLKMLLEAVEDYVEEKYPPTGGHS |
Ga0182031_14036653 | 3300019787 | Bog | MLDLPHMQNRKPEAIKRYLEFRLRQFKMLLDAVEDYVEAKYPATGGHS |
Ga0193733_11301931 | 3300020022 | Soil | AFADLDTETAMLDLPHMQNRKPEAIKRYLEFRLWQFKRLLDAVEDYVHEKYPTTGGHS |
Ga0210399_112264721 | 3300020581 | Soil | EAIKRYLEFRLRQFKMLLDAVEDYVGEKYPATGGHS |
Ga0212123_106344051 | 3300022557 | Iron-Sulfur Acid Spring | DNAFADFDTETAKLDLPNMQNRKPEAIKRYLEFRLQQFKMLLDAVEDYVEEKYPATGGHS |
Ga0224545_10283802 | 3300022881 | Soil | FADFDTETARLDLPHMQNRKPEAIKRYLEFRREQLRMLLNTIEDYVEERYPATGGHS |
Ga0208036_10358332 | 3300025419 | Peatland | DNAFADFDTETAKLDLPHMENRKPEAIKRYLEFRIRQFKMLLDAVEDYVGEKYPATGGHS |
Ga0208191_10755992 | 3300025496 | Peatland | FDTETAKLDLPNMQNRKPEAIKRYLEFRLQQFKMLLEAVEDYAEDQHPATGGHS |
Ga0208819_10718192 | 3300025498 | Peatland | TRVLDSLDNAFADFDTETAKLDLPHMENRKPEAIKRYLEFRIRQFKMLLDAVEDYVGEKYPATGGHS |
Ga0208686_10052513 | 3300025500 | Peatland | MLDLPSMQNRKPEAIKRYLEFRLQQFKMLLDTVEDYVGEKYPATGGHS |
Ga0208563_10545141 | 3300025501 | Peatland | LDSAFANFDTETAQLDLPHMRNRKPEAIKRYLEFRREQFKMLLEVIEDFIEEKYPAQEDILG |
Ga0208691_10322791 | 3300025612 | Peatland | VLDSLDNAFADFDTETAKLDLPNMQNRKPEAIKRYLEFRLQQFKMLLDAVEDYVEEKYPATGGHS |
Ga0208691_11109501 | 3300025612 | Peatland | DAAFADLDTETAKLDLPHMQNPETIKGFLTFRLQQFRMLLNAVEGYVEEKYPATGGHS |
Ga0209056_100268308 | 3300026538 | Soil | FADFDTETAMLDLPHMQNRKPEAIKRYLEFRLRQFKMLLDAVEDYVEEKYPATGGHS |
Ga0209625_10106961 | 3300027635 | Forest Soil | ARVLDSLDSAFADFDTETAKLDLPHMQSRRPEAIKRYLEFRLRQVKMLIEAVEDYVEERYPARGGHS |
Ga0302189_103755001 | 3300028788 | Bog | LDLPHMQNRKPEAIERYLEFRLRQFKMLLDAVEDYVEEKFPATGGHS |
Ga0302229_101872391 | 3300028879 | Palsa | DTETATLDLPHMQNHKPEAIKRYLECRLQQFKMLLDTVEDYVAEKYPATGGHS |
Ga0311363_105241472 | 3300029922 | Fen | MLDLPHMQNRKPEAIERYLEFRLRQFKMLLDAVEDYVEEKFPATGGHS |
Ga0311372_129282652 | 3300030520 | Palsa | DTETAKLDLPNMQNRKPEAIKRYLEFRLQQFKMLLDAVEDYVEEKYPATGGHS |
Ga0265765_10168172 | 3300030879 | Soil | SLDNGFADFDTETAMLDLPNMQNRKPEAIKRYLEFRLQQFKMLLDTVEDFVAEKYPATGGHS |
Ga0265760_100197421 | 3300031090 | Soil | ADFDTETAMLDLPHMQNRKPDAIKRYLEFRRQQFEMLLDAVEDYVVEKYPATGGHS |
Ga0302320_100208897 | 3300031524 | Bog | MLDLPNMQNRKPEAIKRYLEFRLRQFKMLIDAVEDFVEEKYPATGGRS |
Ga0311301_104025421 | 3300032160 | Peatlands Soil | ADFDTETAMLDLPHMQNRKPEAIKRYLEFRLRQFKMLLDAVEDYVEEKYPATGGHS |
Ga0335072_105042104 | 3300032898 | Soil | LDSLDSAFSDFDTETAMLDLPHMQNRKPEAIKRYLEFRLRQFRMLLDAVEEYVGEKYPLTGGHS |
Ga0326728_100157081 | 3300033402 | Peat Soil | EAIKRFLEFRLRQFKLLLDAVEDYVEEKHPATGGQA |
Ga0326728_100255806 | 3300033402 | Peat Soil | FDSATAKLDLPHMQNRKPEAIKRFLEFRLRQFKLLLDAVEDYVEEKHPATGGHA |
Ga0326727_100245156 | 3300033405 | Peat Soil | PEAIKRFLEFRLRQFKLLLDAVEDYVEEKHPATGGHA |
Ga0334821_061741_467_652 | 3300033798 | Soil | LDSAFADFDTETAMLDLPHMQNRKPEAIKRYLEFRLRQFKMLLDAVEDYVEEKYPATGGH |
Ga0334840_179605_384_530 | 3300033824 | Soil | MLDLPHMQKRKPEAIKHYLEFRLRQFRMLLDEVEDYVEERFPATGGHS |
Ga0334790_013079_3964_4107 | 3300033887 | Soil | MRNRKPDAIKRYLEFRLQQFKMLLDAVEDYVVEDYVEEKFPATGGHS |
⦗Top⦘ |