NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F093032

Metagenome Family F093032

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F093032
Family Type Metagenome
Number of Sequences 106
Average Sequence Length 40 residues
Representative Sequence SEVSVNSPGNPWSQSRRRKGRLWWERFAEKESFKPGVEE
Number of Associated Samples 12
Number of Associated Scaffolds 106

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 4.72 %
% of genes from short scaffolds (< 2000 bps) 3.77 %
Associated GOLD sequencing projects 12
AlphaFold2 3D model prediction Yes
3D model pTM-score0.31

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (97.170 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Annelida → Digestive System → Unclassified → Unclassified → Marine Gutless Worms
(100.000 % of family members)
Environment Ontology (ENVO) Unclassified
(100.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Animal → Animal proximal gut
(100.000 % of family members)



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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 32.84%    β-sheet: 0.00%    Coil/Unstructured: 67.16%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.31
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 106 Family Scaffolds
PF01302CAP_GLY 0.94
PF10267Tmemb_cc2 0.94
PF00078RVT_1 0.94
PF01401Peptidase_M2 0.94
PF00431CUB 0.94



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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A97.17 %
All OrganismsrootAll Organisms2.83 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300010315|Ga0136654_1063341All Organisms → cellular organisms → Eukaryota → Opisthokonta1959Open in IMG/M
3300010315|Ga0136654_1361582Not Available540Open in IMG/M
3300010377|Ga0126328_10057548Not Available2101Open in IMG/M
3300010378|Ga0126330_10122687All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cytophagaceae → Candidatus Nephrothrix → unclassified Candidatus Nephrothrix → Candidatus Nephrothrix sp. EaCA1385Open in IMG/M
3300012273|Ga0126329_10192751All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cytophagaceae → Candidatus Nephrothrix → unclassified Candidatus Nephrothrix → Candidatus Nephrothrix sp. EaCA1021Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Marine Gutless WormsHost-Associated → Annelida → Digestive System → Unclassified → Unclassified → Marine Gutless Worms100.00%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300010290Marine gutless worms symbiont microbial communities from Oahu, Hawaii - Inanidrilus sp. 2 OAHU.JWI-54 metaGHost-AssociatedOpen in IMG/M
3300010292Marine gutless worms symbiont microbial communities from Oahu, Hawaii - Inanidrilus sp. 1 OAHU.JWI-67 metaGHost-AssociatedOpen in IMG/M
3300010294Marine gutless worms symbiont microbial communities from Oahu, Hawaii - Inanidrilus sp. 2 OAHU.JWI-42 metaGHost-AssociatedOpen in IMG/M
3300010295Marine gutless worms symbiont microbial communities from Oahu, Hawaii - Inanidrilus sp. 2 OAHU.JWI-49 metaGHost-AssociatedOpen in IMG/M
3300010298Marine gutless worms symbiont microbial communities from Oahu, Hawaii - Inanidrilus sp. 1 OAHU.JWI-14 metaGHost-AssociatedOpen in IMG/M
3300010314Marine gutless worms symbiont microbial communities from Oahu, Hawaii - Inanidrilus sp. 2 OAHU.JWI-98 metaGHost-AssociatedOpen in IMG/M
3300010315Marine gutless worms symbiont microbial communities from Oahu, Hawaii - Inanidrilus sp. 1 OAHU.JWI-70 metaGHost-AssociatedOpen in IMG/M
3300010377Marine gutless worms symbiont microbial communities from Oahu, Hawaii - Inanidrilus sp. 1 OAHU.JWI-13 metaGHost-AssociatedOpen in IMG/M
3300010378Marine gutless worms symbiont microbial communities from Oahu, Hawaii - Inanidrilus sp. 2 OAHU.JWI-91 metaGHost-AssociatedOpen in IMG/M
3300011190Marine gutless worms symbiont microbial communities from Oahu, Hawaii - Inanidrilus sp. 1 OAHU.JWI-30 metaGHost-AssociatedOpen in IMG/M
3300012273Marine gutless worms symbiont microbial communities from Oahu, Hawaii - Inanidrilus sp. 2 OAHU.JWI-85 metaGHost-AssociatedOpen in IMG/M
3300012887Marine gutless worms symbiont microbial communities from Oahu, Hawaii - Olavius sp. 1 OAHU.JWI-45 metaGHost-AssociatedOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0126333_103686833300010290Marine Gutless WormsCSEVSVNSPGYPWSQSRRRNGRLWWERFAEKKSFKPGVEE*
Ga0126333_106430543300010290Marine Gutless WormsMAAKELKALVNSPGNPWSQSGRRKGRLRWEGFAEKESFKPGEEE*
Ga0126333_108327913300010290Marine Gutless WormsEVSVNSPGNPWSQSGRRKGRLRWEGFAEKESFKSGVEE*
Ga0126333_116491423300010290Marine Gutless WormsMCSEVSVNSPGNPWSQSGRRKGRLWWEEFAEKGGFKPGMKD*
Ga0126333_126837913300010290Marine Gutless WormsRICSEVSVNSPGNPWSQSRRRNGRLWWERFAEKESFKPGVKK*
Ga0126333_127042423300010290Marine Gutless WormsSVNSPGNPWSQSGRRKGRLRWEGFAEKEGFKLGMKMKE*
Ga0126333_128359623300010290Marine Gutless WormsSEVSVNSPGYPWSQSGRRKGRLRWEGFAEKESFKSGVEE*
Ga0126333_130106023300010290Marine Gutless WormsSEVSVNSPGNPWSQSGRRKGRLRWEGFAEKESFKPGVKEWRGNG*
Ga0126333_130477013300010290Marine Gutless WormsNSPGNPWSQSSRRKGRLWWERFAEKESFKPGVEE*
Ga0126333_132724513300010290Marine Gutless WormsENRKSREKKRICSEVSVNSPGNPWSQSRRRNGNLRWEGFAEKESFKPGVKE*
Ga0126326_100088313300010292Marine Gutless WormsSEVSVNSPGNPWSQSRRRKGRLWWERFAEKESFKPGVEE*
Ga0126326_101192023300010292Marine Gutless WormsMCSEVSVNSPGNPWSQSGRTQGRVRWEGFAEKEGFKLGMKE*
Ga0126326_106288513300010292Marine Gutless WormsVSVNSPGNPWSQSGRRKGRLRWEGFAEKESFKSGVEE*
Ga0126326_110610633300010292Marine Gutless WormsSEVSVNSPGNPWSQSRRRNGRLWWEGFAEKESFKHGMKE*
Ga0126326_111777613300010292Marine Gutless WormsVSVNSPGNPWSQSRRRKGRLWWERFVEKESFKPGMEE*
Ga0126326_113212013300010292Marine Gutless WormsVNSPGNLWSQSGRRNGRLRWEGFAAKGGFKPGMKE*
Ga0126326_116187913300010292Marine Gutless WormsSDVSVNSPGNLWSQSRRRKGRLWWERFVEKESFKPGVEE*
Ga0126326_116740113300010292Marine Gutless WormsICSEVSVNSLGSAWSQSCRKKGRLHGKGLAEKKCFKPGMKEY*
Ga0126326_123250023300010292Marine Gutless WormsICSEVSVNSPGNPWSQSRRRKGRLWWERLVEKESFKPGVEE*
Ga0126326_125908333300010292Marine Gutless WormsVNSPGNPWSQSRRRKGRLWWERFVEKESFKPGVEE*
Ga0126326_128733513300010292Marine Gutless WormsSEVSVNSPGNPWSQSRRRNGRLWWEGFAEKESFKHGVKK*
Ga0126326_128856113300010292Marine Gutless WormsEVSVNSPGNPWSQSRRRKGRLWWERFAEKESFEPGVEE*
Ga0126326_131412013300010292Marine Gutless WormsNSPENPWSQSRRRNGRLWWEGFAEKESFKPGVKE*
Ga0126326_131951623300010292Marine Gutless WormsMIRSIASVNSPGNPWSQSGRRKGRLRWEGFAEKESFKPGV
Ga0126326_133672413300010292Marine Gutless WormsNSPGNPWSQSRRRKGRLWWERFVEKESFKPGVEE*
Ga0126326_136000423300010292Marine Gutless WormsSELSVNSLGNPCTQTGRRKGRLWWEGFAEKEGFEPGMKE*
Ga0126326_138960633300010292Marine Gutless WormsVNSPGNPWSQSRRRKGRLWWERFAEKESFKPGVKE*
Ga0126332_1001202013300010294Marine Gutless WormsMCSEVSVNSPGNPWSQSGRTEGRLRWEGFAEKEGFKLGMKE*
Ga0126332_1001297043300010294Marine Gutless WormsMDVFSEVSVNSPENPWSRSWRRKRRLRWEGLAENEGFKPEMKE
Ga0126332_1001906253300010294Marine Gutless WormsKWICSEVSVNSLGNLWSPFGRRKGRLWWEEFAVKGGFKPEMKE*
Ga0126332_1012631313300010294Marine Gutless WormsEVSVNSPGNPWSQSMRRKGRLWWERFVEKESFKPGVEE*
Ga0126332_1013079313300010294Marine Gutless WormsICSEVSVNSPGNPWSQSRRRKGRLWWERFLEKESFKPGVEE*
Ga0126332_1020694813300010294Marine Gutless WormsVNSPGNPWSQSGRRKGRLWWEGFAEKEGFKPGMKQ*
Ga0126332_1021964113300010294Marine Gutless WormsVNSPGNPWSQSRRRNGRLWWEGFAEKESFKHGVKK*
Ga0126332_1027177933300010294Marine Gutless WormsSEVSVNSPGNPWSQSGRRKGRLRWEGFAEKESFKPGVEE*
Ga0126332_1035440013300010294Marine Gutless WormsEVSVNSPENPWSQSRRRNGRLRWEGFAEKESFKPEVKE*
Ga0126334_1002153113300010295Marine Gutless WormsCSEVSVNSPGNPWSQSRRRKGRLWWERFVEKESFKPGVEEWRGDG*
Ga0126334_1003611523300010295Marine Gutless WormsSEVSVNSPGNPWSQSGRRKGRLRWEGFAEKESFKSGVEE*
Ga0126334_1012401123300010295Marine Gutless WormsMCSEVSVNSPGNPWSQSGRRKGRLWWEEFAEKEGFKPGMKD*
Ga0126334_1014476443300010295Marine Gutless WormsRICSEVSVNSPGNPWSQSRRRKGRLWWERFVEKESFRPGVEE*
Ga0126334_1026871223300010295Marine Gutless WormsNSPGNPWSQSRRRKGRLWWERFAKKESFKPAVKE*
Ga0126334_1032173913300010295Marine Gutless WormsEGSVNSPGNPSSQSERRKGRLRWEGFAEKEGFKPGMKEYGVMEY*
Ga0126334_1039634913300010295Marine Gutless WormsICSVVSVNSPENPWSQSRRRKGRLWWERFVEKESFEPGVEEQKG*
Ga0126334_1041628513300010295Marine Gutless WormsKRICSEVSVNSPGNPWSQSRKRKGRLWWERFAEKESFKPGVKE*
Ga0126325_1001376913300010298Marine Gutless WormsRICSEVSVNSPGNPWSQSRRRKGRLWWERFVEKESFKPGVAE*
Ga0126325_1006179613300010298Marine Gutless WormsVEKRKRKKRICSGVSENVPGNPWRRKGRVWWEEFAEKEGFKPGMKE*
Ga0126325_1007151843300010298Marine Gutless WormsMAAKELKALVSSPGNPWSQSGRRKGRLRWEGFAEKESFKPGEEE*
Ga0126325_1013655613300010298Marine Gutless WormsVNSPGNPWSQSGRRKGRLRWEGFAEKESFKPGVKE*
Ga0126325_1014471623300010298Marine Gutless WormsQICSEVSVNSPGNPWSQSRRRKGRLWWERFAEKESFKPGEEE*
Ga0126325_1024925933300010298Marine Gutless WormsSEVSVNSPGNPWSQSRRRNGRIWWEGFAEKESFKPGVKE*
Ga0126325_1025590913300010298Marine Gutless WormsRICSEVSVNSPGNPWSQSRRRKGRLWWERFAEKESFKPGVKE*
Ga0126325_1030054713300010298Marine Gutless WormsSEVSVNSPGNPWSQSRRRKGRLWWERFVEKESFKPGVEE*
Ga0126325_1037574013300010298Marine Gutless WormsKRICSEVSVNSPGNPWSQSRRRKGRLWWEGFAEKESFKPGVEE*
Ga0126325_1046958813300010298Marine Gutless WormsEVSVNSPGNPWSQSRRRNGRLWWEGFAEKESFKPGVKG*
Ga0126331_110262213300010314Marine Gutless WormsICSEVSVNSPENPWSQSRRRKGRLWWERFAEKESFKPGVEE*
Ga0126331_121818533300010314Marine Gutless WormsSVNSPGNPWSQSRRRKGRLWWERFAEKVSFKPGVKG*
Ga0126331_125652913300010314Marine Gutless WormsSEVSVNSPGNPWSQSGRRKGRLRWEGFAEKVSFKPGVEE*
Ga0126331_127038213300010314Marine Gutless WormsVKTDNLCSEVSVNSPGNPWSQSRRRKGRLWWERFAEKESFKLGMEE
Ga0126331_128023913300010314Marine Gutless WormsMCSEVSVNSPGNLWSQSGRRNGRLRWEGFAEKEGFQAWN
Ga0136654_101348113300010315Marine Gutless WormsMSEVSVNSPENPCSQSPVRKGRLRWEWFAEKKGFKPGMKE*
Ga0136654_103644313300010315Marine Gutless WormsKRICSEVSVNSPGNPWSQSRRRKGRLWWERFVEKEGFKPEVEE*
Ga0136654_106334143300010315Marine Gutless WormsNSPGNPWSQSGRRKGRLRWEGFAEKESFKPGVEE*
Ga0136654_112926513300010315Marine Gutless WormsVNSLGNLWSQSGRRKGRLQWEGFVEKEGFKPGERRGDG*
Ga0136654_117487713300010315Marine Gutless WormsVSVNSPGNPWSQSGRRKGRLWWEGFAEKESFKPGVED*
Ga0136654_118184213300010315Marine Gutless WormsDVLLNSPGNLWSQSGRRKRRLWWERFAEKESFKPGVKG*
Ga0136654_123754913300010315Marine Gutless WormsSEVSVNSPGNPWSQSRRRNGRLWWERFAEKESFKPGVKE*
Ga0136654_130760313300010315Marine Gutless WormsICSEASVNSPGNPWSQSRRRKGRLWWERFAEKESFKPGVKK*
Ga0136654_136158213300010315Marine Gutless WormsCSEVSVNSPGNPWSQSKRRKGSLRWEGFAEKENFKAGVEEWRGNR*
Ga0136654_137123413300010315Marine Gutless WormsSEVSVNSPGNPWSQSGRRKGRLWWEGFAEKDSFKPGVKE*
Ga0136654_138738713300010315Marine Gutless WormsVSVNSPGNLWSQSGRRKGRLWWEGFAEEESFKPGVEK*
Ga0126328_1000901333300010377Marine Gutless WormsMCSEVSVNSPENPWSQSGRTQGRLRWEGFAEQEGFKLGMKE*
Ga0126328_1005754833300010377Marine Gutless WormsSEVSVNSPGNPWSQSRRRKGRLWWERFAEKESFKHGVEE*
Ga0126328_1009017013300010377Marine Gutless WormsICSEVSVNSPGNPWSQSGRRKGRLRWEGFAEKESFKPGVEE*
Ga0126328_1010208733300010377Marine Gutless WormsICSEVSVNSPGNPWSQSGRRKGRLRWEGFAEKESFKPGVKE*
Ga0126328_1014107713300010377Marine Gutless WormsEVSVNSPGNPWSQSRRRKGRLRWEGFAEKEGFKPGMKE*
Ga0126328_1017537733300010377Marine Gutless WormsKKLICSEVSVKSPGNPWSQSRRRKGRLWWERLTEKESFKPGVEK*
Ga0126328_1017812113300010377Marine Gutless WormsENRKNAICSEVSVNSPGNLWSPFGRRKGRLWWEVFAVKEGFKPGMKE*
Ga0126328_1020127313300010377Marine Gutless WormsVENRKNAICSEVSVNSPGNLWSPFGRRKGRLWWEVFAVKEGF
Ga0126328_1020692413300010377Marine Gutless WormsMCSEVSVNSPGNPWSQSRRRTGRLRWDGFAEKECFKPGMKE
Ga0126328_1029854413300010377Marine Gutless WormsEVLVNSPGNPWSQSRRRKGRLWWERFAEKESFKPGVKE*
Ga0126328_1036006613300010377Marine Gutless WormsEVSVNSPENPWNQSRRRKRRLRREGFAEKEGFKPGTKE*
Ga0126328_1040682813300010377Marine Gutless WormsVSVNSPGNPWSQSRRRKGRLWWERLTEKESFKPGVEE*
Ga0126330_1001076413300010378Marine Gutless WormsSEVSVNSPGNPWSQSTRKGRLWWERFAEKESFKPGVKV*
Ga0126330_1002189313300010378Marine Gutless WormsSEVSVSSPGNPWSQSGRRKGRLRWEGFAEKESFKSGVKE*
Ga0126330_1012209913300010378Marine Gutless WormsVNSPGNPWSQSGRGIGRLRWEGFAEKDGFKPGVEE*
Ga0126330_1012268713300010378Marine Gutless WormsVSVNSPGNPWSQSRRRKGRLWWERFAEKESFKPGLDE*
Ga0126330_1013490533300010378Marine Gutless WormsSEVSVNSPGNPWSQSRRRKGRIWWEGFAEKESFKPGVKE*
Ga0126330_1017897013300010378Marine Gutless WormsEVSVNSPGKPWSQSRRRKGRLWWERFAERESFKPGVKE*
Ga0126330_1018903613300010378Marine Gutless WormsMDMLRCSEVSVNSPGNPWSESGRRKGRLWWEGFAEKENFKPGVKE*
Ga0126330_1022406113300010378Marine Gutless WormsCSEVSVNSPGNPWSQSRRRKGRLWWERFVEKESFKPGVEE*
Ga0126330_1024167413300010378Marine Gutless WormsVSVNSPGNPWSQSGRRKGRLRWEGFAEKESFKPGVKE*
Ga0126330_1025969413300010378Marine Gutless WormsKRICSEVSVNSPGNLWSQSRRRKGRLWWERFAEKESFKPGVKE*
Ga0126330_1034372633300010378Marine Gutless WormsSEVSVNSPGNPWSQSGRRKGRLRWEGFAEKKSLKSAVEE*
Ga0126330_1038136533300010378Marine Gutless WormsSVNSPGNPWSQSRRRKGRLWWERFVEKESFKPGVEECRGGG*
Ga0126330_1038715213300010378Marine Gutless WormsMDMPEVSVNSPGNPWSQSGRRKGSLWWERFAEKESFKPGVKE*
Ga0126327_1022801213300011190Marine Gutless WormsKRICSEVSVNSPGNPWSQSGRRKGRLRWEGFAEKESFKPGVKE*
Ga0126327_1029929213300011190Marine Gutless WormsKRICSEVSVSSPGNPWSQSGRRKGRLRWEGFAEKESFKSGVKE*
Ga0126329_1003490033300012273Marine Gutless WormsQTVPESPWSQSRRGKGRLWGEGVVEKESFKPGVKE*
Ga0126329_1003765133300012273Marine Gutless WormsVVSINSLGNRCNQSGRRKGRLRWEGFAEKEGFKLGMKE*
Ga0126329_1019275113300012273Marine Gutless WormsVSVNSPGNPWSQSGRRKGRLRWEGFAEKDSFEPGVEQ*
Ga0126329_1020833513300012273Marine Gutless WormsEVSVNSPGNPWSQSKRRKGRLWWERFVEKESFKPVVEE*
Ga0126329_1030946633300012273Marine Gutless WormsSVNSPGNPWSQSGRRKGRLRWEGFAEKESFKSGVEE*
Ga0126329_1036551223300012273Marine Gutless WormsSVNSPGNPWSQSRRRKDRLWWERFVEKESFKPGVKE*
Ga0126335_112498223300012887Marine Gutless WormsCSEVSVNSPGNPWSQSGRRKGRLWWERFAEKESFKPGVKE*
Ga0126335_113739413300012887Marine Gutless WormsVNSPGNPWSQSGRRKGRLWWERFAEKESFKPGVKE*
Ga0126335_115759713300012887Marine Gutless WormsVSVNSPENLWSQSGRRKGRLWWERFAEKESFKHGVKE*


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