NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F093022

Metagenome / Metatranscriptome Family F093022

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Overview Alignments Structure & Topology Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F093022
Family Type Metagenome / Metatranscriptome
Number of Sequences 106
Average Sequence Length 72 residues
Representative Sequence MSRSRVIADIRRHRGDARNIIGLIGEFASSKEADVDWLVRPDQAHLSPPGQIIGYSEQYDQNWSHRLRDR
Number of Associated Samples 66
Number of Associated Scaffolds 106

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 100.00 %
% of genes near scaffold ends (potentially truncated) 98.11 %
% of genes from short scaffolds (< 2000 bps) 100.00 %
Associated GOLD sequencing projects 66
AlphaFold2 3D model prediction Yes
3D model pTM-score0.69

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (99.057 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland
(36.792 % of family members)
Environment Ontology (ENVO) Unclassified
(36.792 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(50.943 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 26.53%    β-sheet: 15.31%    Coil/Unstructured: 58.16%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.69
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A99.06 %
All OrganismsrootAll Organisms0.94 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300003551|Ga0005498J51100_105180Not Available640Open in IMG/M
3300003938|Ga0063230_11523119Not Available587Open in IMG/M
3300004099|Ga0058900_1303408Not Available655Open in IMG/M
3300004102|Ga0058888_1355178Not Available582Open in IMG/M
3300004103|Ga0058903_1389703Not Available582Open in IMG/M
3300004118|Ga0058886_1376860Not Available620Open in IMG/M
3300004120|Ga0058901_1263677Not Available629Open in IMG/M
3300004120|Ga0058901_1385207Not Available639Open in IMG/M
3300004120|Ga0058901_1491542Not Available663Open in IMG/M
3300004138|Ga0058905_1489829Not Available764Open in IMG/M
3300004139|Ga0058897_10625277Not Available651Open in IMG/M
3300004631|Ga0058899_11425408Not Available732Open in IMG/M
3300010858|Ga0126345_1025814Not Available664Open in IMG/M
3300010860|Ga0126351_1243988Not Available644Open in IMG/M
3300010861|Ga0126349_1123064Not Available643Open in IMG/M
3300010862|Ga0126348_1075367Not Available695Open in IMG/M
3300010865|Ga0126346_1131047Not Available668Open in IMG/M
3300010865|Ga0126346_1308383Not Available662Open in IMG/M
3300010865|Ga0126346_1346774Not Available665Open in IMG/M
3300011120|Ga0150983_10561495Not Available679Open in IMG/M
3300011120|Ga0150983_10606879Not Available669Open in IMG/M
3300011120|Ga0150983_12269883Not Available662Open in IMG/M
3300011120|Ga0150983_13073593Not Available641Open in IMG/M
3300011120|Ga0150983_13998398Not Available683Open in IMG/M
3300012212|Ga0150985_108178510Not Available674Open in IMG/M
3300012469|Ga0150984_115793248Not Available620Open in IMG/M
3300012469|Ga0150984_122154241Not Available682Open in IMG/M
3300016698|Ga0181503_1031146Not Available650Open in IMG/M
3300016698|Ga0181503_1261593Not Available647Open in IMG/M
3300016700|Ga0181513_1171557Not Available684Open in IMG/M
3300016700|Ga0181513_1290650Not Available649Open in IMG/M
3300016701|Ga0181509_1311495Not Available562Open in IMG/M
3300016705|Ga0181507_1139743All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium864Open in IMG/M
3300016705|Ga0181507_1243842Not Available779Open in IMG/M
3300016705|Ga0181507_1337662Not Available691Open in IMG/M
3300016728|Ga0181500_1133618Not Available639Open in IMG/M
3300016730|Ga0181515_1178957Not Available575Open in IMG/M
3300016750|Ga0181505_10849204Not Available879Open in IMG/M
3300019230|Ga0181501_1160803Not Available680Open in IMG/M
3300019230|Ga0181501_1214790Not Available656Open in IMG/M
3300019232|Ga0180114_1122964Not Available647Open in IMG/M
3300019240|Ga0181510_1174059Not Available646Open in IMG/M
3300019240|Ga0181510_1176575Not Available682Open in IMG/M
3300019240|Ga0181510_1264253Not Available661Open in IMG/M
3300019242|Ga0181502_1002360Not Available644Open in IMG/M
3300019242|Ga0181502_1114780Not Available667Open in IMG/M
3300019242|Ga0181502_1157600Not Available646Open in IMG/M
3300019242|Ga0181502_1498501Not Available634Open in IMG/M
3300019244|Ga0180111_1039129Not Available531Open in IMG/M
3300019249|Ga0184648_1254133Not Available635Open in IMG/M
3300019256|Ga0181508_1038772Not Available525Open in IMG/M
3300019256|Ga0181508_1156009Not Available654Open in IMG/M
3300019256|Ga0181508_1343038Not Available642Open in IMG/M
3300019258|Ga0181504_1162206Not Available671Open in IMG/M
3300019258|Ga0181504_1164237Not Available741Open in IMG/M
3300019258|Ga0181504_1274125Not Available655Open in IMG/M
3300019258|Ga0181504_1316656Not Available673Open in IMG/M
3300019260|Ga0181506_1026849Not Available654Open in IMG/M
3300019260|Ga0181506_1174991Not Available592Open in IMG/M
3300019260|Ga0181506_1251262Not Available568Open in IMG/M
3300019260|Ga0181506_1347724Not Available659Open in IMG/M
3300019260|Ga0181506_1358762Not Available662Open in IMG/M
3300019260|Ga0181506_1425439Not Available731Open in IMG/M
3300019268|Ga0181514_1036995Not Available573Open in IMG/M
3300019268|Ga0181514_1037608Not Available641Open in IMG/M
3300019268|Ga0181514_1278542Not Available678Open in IMG/M
3300019268|Ga0181514_1643249Not Available680Open in IMG/M
3300019270|Ga0181512_1154539Not Available690Open in IMG/M
3300019270|Ga0181512_1716235Not Available623Open in IMG/M
3300022498|Ga0242644_1020543Not Available660Open in IMG/M
3300022498|Ga0242644_1020921Not Available655Open in IMG/M
3300022500|Ga0242643_111082Not Available657Open in IMG/M
3300022505|Ga0242647_1025103Not Available617Open in IMG/M
3300022507|Ga0222729_1040826Not Available617Open in IMG/M
3300022508|Ga0222728_1062809Not Available646Open in IMG/M
3300022508|Ga0222728_1077223Not Available600Open in IMG/M
3300022509|Ga0242649_1061295Not Available548Open in IMG/M
3300022510|Ga0242652_1029588Not Available625Open in IMG/M
3300022512|Ga0242676_1046775Not Available530Open in IMG/M
3300022522|Ga0242659_1064057Not Available673Open in IMG/M
3300022522|Ga0242659_1070562Not Available650Open in IMG/M
3300022523|Ga0242663_1077989Not Available629Open in IMG/M
3300022528|Ga0242669_1068233Not Available639Open in IMG/M
3300022529|Ga0242668_1124922Not Available545Open in IMG/M
3300022530|Ga0242658_1081270Not Available745Open in IMG/M
3300022530|Ga0242658_1159517Not Available588Open in IMG/M
3300022532|Ga0242655_10107280Not Available775Open in IMG/M
3300022533|Ga0242662_10214392Not Available611Open in IMG/M
3300022711|Ga0242674_1039012Not Available622Open in IMG/M
3300022712|Ga0242653_1049746Not Available678Open in IMG/M
3300022713|Ga0242677_1029112Not Available729Open in IMG/M
3300022714|Ga0242671_1057758Not Available660Open in IMG/M
3300022721|Ga0242666_1083714Not Available719Open in IMG/M
3300022721|Ga0242666_1103687Not Available660Open in IMG/M
3300022722|Ga0242657_1055429Not Available882Open in IMG/M
3300022722|Ga0242657_1169913Not Available586Open in IMG/M
3300022724|Ga0242665_10128256Not Available781Open in IMG/M
3300022724|Ga0242665_10226928Not Available626Open in IMG/M
3300022726|Ga0242654_10241538Not Available644Open in IMG/M
3300030813|Ga0265750_1060227Not Available594Open in IMG/M
3300030863|Ga0265766_1011141Not Available650Open in IMG/M
3300030888|Ga0265769_112011Not Available608Open in IMG/M
3300030963|Ga0265768_107994Not Available652Open in IMG/M
3300030975|Ga0099845_1447271Not Available649Open in IMG/M
3300031421|Ga0308194_10296673Not Available558Open in IMG/M
3300032515|Ga0348332_13790934Not Available667Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland36.79%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil28.30%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil15.09%
Boreal Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil7.55%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil4.72%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment2.83%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere1.89%
WetlandEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Wetland0.94%
Plant LitterEnvironmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter0.94%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere0.94%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300003551Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF147 (Metagenome Metatranscriptome, Counting Only)EnvironmentalOpen in IMG/M
3300003938Wetland microbial communities from Twitchell Island in the Sacramento Delta, California, USA - surface sediment Aug2011 Site C1 Bulk Metatranscriptome (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300004099Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF236 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004102Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF212 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004103Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF242 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004118Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF208 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004120Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF238 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004138Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF246 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004139Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF230 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004631Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010858Boreal forest soil eukaryotic communities from Alaska, USA - C3-2 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300010860Boreal forest soil eukaryotic communities from Alaska, USA - C5-2 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300010861Boreal forest soil eukaryotic communities from Alaska, USA - C4-5 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300010862Boreal forest soil eukaryotic communities from Alaska, USA - C4-4 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300010865Boreal forest soil eukaryotic communities from Alaska, USA - C3-3 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300011120Combined assembly of Microbial Forest Soil metaTEnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300016698Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300016700Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300016701Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_30_metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300016705Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300016728Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_10_metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300016730Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300016750Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019230Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_30_metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019232Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT530_16_1Ra (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019240Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019242Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_10_metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019244Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT293_16_1Ra (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019249Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019256Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019258Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019260Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019268Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019270Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300022498Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-32-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022500Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-26-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022505Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022507Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-27-M (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300022508Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-19-M (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300022509Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-27-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022510Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-14-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022512Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022522Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022523Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022528Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022529Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022530Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022532Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022533Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022711Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022712Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-32-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022713Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022714Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022721Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022722Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022724Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022726Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300030813Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030863Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZU2 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030888Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZU6 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030963Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZU5 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030975Forest soil eukaryotic communities from Alaska, USA, for a soil warming experiment in a boreal forest - Alaskan Soil AK pilot (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031421Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300032515FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0005498J51100_10518023300003551Forest SoilMSVSRVFADIRRHRGDARNIIGLIGNFASVKGADVDWLVRPDQAHLSPPGSVIGYSEQYDPSWANRLRDR
Ga0063230_1152311923300003938WetlandMSRSRIIADLRRHRGDARNVVRLLANFASSKGADVDWLLRPDQAPLSPPGQVIGYSEHFDQTWASQIRDR
Ga0058900_130340813300004099Forest SoilMSRSRVIADIRRHRGDARNIVRLLTNFASSKDADIDWLLRPDQAQLAPPGQVIGLSDQFDLAWSHQVRD
Ga0058888_135517813300004102Forest SoilMSASLVFADIRRHRGDARNIIGLIGNFASVAGASVDWLLRPDQTYLSPPGTVIGYSEQFDPAWVNRIRDRIVQ
Ga0058903_138970313300004103Forest SoilMSVSRVLADIRRHRGDARNIIGLIGNFASVKGADVDWLVRPDQAHLSPPGSVIGYSEQYD
Ga0058886_137686023300004118Forest SoilMRSRVFADLRRHRGDARNIVGLIATFASSKDADVDWLLRPDQAQLSPPGQVIGHSEQFDETWAAQVRDHIAQLAQN
Ga0058901_126367723300004120Forest SoilMSRSRVIADIRRHRGDARNIIGLVVAFASANDADIDWLVSPDQARLRPPGQIIGTADQYDPSWPLRIR
Ga0058901_138520723300004120Forest SoilMSVSRVFADIRRHRGDARNIIGLIGNFASVKGADVDWLVRPDQAHLSPPGSVIGYSEQYDPSWANRLRD
Ga0058901_149154223300004120Forest SoilMSRSRVIADLRRHRGDARNIIGLVANFAASKAADVDWLVRPDQAHLLPPGQIIGTSDQYDQSWSQRLAERIAQ
Ga0058905_148982923300004138Forest SoilMSVSRVFADIRRHRGDARNIIGLIGNFASVKGADVDWLVRPDQAHLSPPGSVIGYSEQYDPSWANRLRDRIVQLS
Ga0058897_1062527713300004139Forest SoilMSRSRVIADLRRHRGDARNIVGLVTSFASGKDADVDWLVRPDQAHLPPPGQIIGVADQYDLSWSNRIRERLTQVA
Ga0058899_1142540813300004631Forest SoilMSVSRVFADIRRHRGDARNIIGLIGNFASVKGADVDWLVRPDQAHLSPPGSVIGYSEQYDPSWANRLR
Ga0126345_102581413300010858Boreal Forest SoilMRRSRVIADLRRHRGDARNIIGLLAAFASSKEADIDWLVRPDQAQLSPPDQTIGYSEQYDQTWSDRLRDHI
Ga0126351_124398823300010860Boreal Forest SoilMNRSRVIADIRRHRGDAKNIIGLIGNFASSKEADVDWLVRPDQAHLTLPGQIIGYSEQYDQSWSHRVRERIV
Ga0126349_112306423300010861Boreal Forest SoilMGRSRVIADIRRHRGDARNIIGLIGDFASNKGTDVDWLVRPDQAHLLPPGQVIKCADQDD
Ga0126348_107536723300010862Boreal Forest SoilMGRSRVIADIRRHRGDARNIIGLIGDFASSKGADVEWLVRPDQSHLLPSAHFIGSTDQFDPSWANRVRERLVQITQDDTG
Ga0126346_113104713300010865Boreal Forest SoilMGRSRVIADIRRHRGDARNIIGLIGDFASSKGADVDWLVRQDQSHGVPPDRVIGCSDQYDLAWAHRVRDHL
Ga0126346_130838323300010865Boreal Forest SoilMSRSRVTADLRRHRGDARNIIGLVGNFAASKAADVDWLVRPDQAHLLPPGQIIGTSDQYDQSWSQRLAERIA
Ga0126346_134677413300010865Boreal Forest SoilMSRSRVIADIRRHRGDARNIIGLIGEFASSKEADVDWLVRPDQAHLSPPGQIIGYSEQYDQNWSHRLRDR
Ga0150983_1056149513300011120Forest SoilMSRSRVIADLRRHRGDARNIIGLVANFATSKGADVDWLVRPDQAHLLPPGQIIGTADQYDPTWSHRLTERITQVAQNETG
Ga0150983_1060687933300011120Forest SoilMSQSRVIADIRRHRGFARNIIGLIGNFALSKGADVDWLVRPDQAHLSPPGQIIGISDQYDQLWSSRIRDQLSQMA
Ga0150983_1226988313300011120Forest SoilMNRSRVIADIRRHRGDARNIVRLLTNFASSKEANLDWLLRPDQVQLAPPDQTIGLSEQFDLTWSHQVRDRIS
Ga0150983_1307359323300011120Forest SoilMGRSLVIADIRRHRGYAKNIIDMIGDFASSKGADVAWLVRTDQSHLVPPDQVIGCADQYD
Ga0150983_1399839813300011120Forest SoilMNRSRVIADIRRHRGDARNIIGLIGNFASSKDADIDWLVRPDQAHLARPGQIIGYSEQHDQSWSYRVRERIVQLAQSET
Ga0150985_10817851023300012212Avena Fatua RhizosphereMGRSRIIADIRRHRGDARNIIGLVGDFASNNGADVDWLLRPDQAQFSPPGEVIGCADQYDPTWVNRIRERLAQLA
Ga0150984_11579324813300012469Avena Fatua RhizosphereMSQSRVVADIRRHRGSARNIIGLIGKFAFSKEADIDWLVRPDQAHLALPGQIIGYSEQY
Ga0150984_12215424113300012469Avena Fatua RhizosphereMGRSRIIADIRRHRGDARNIIGLVGDFASNNGADVDWLLRPDQAQFSPPGEVIGCADQYDPTWVNRIRERLA
Ga0181503_103114623300016698PeatlandMNRSRVIADIRRHRGDARNIVRLLMNFASSKEADLDWLLRPDQAQLAPPGQIIGISEQFDLAWSHQVRDRIK
Ga0181503_126159323300016698PeatlandMIQSRVFADIRRHRGYAKNIVGLIESFASSNGATIDWLLRPDQAQLSPPGQVIGYSEQFDPTWASQVRD
Ga0181513_117155713300016700PeatlandMIQSRVFADIRRHRGYAKNIVGLIESFASSNGATIDWLLRPDQAQLSPPGQVIGYSEQFDPTWASQVRDRIAQLTQSES
Ga0181513_129065013300016700PeatlandMRFRVFADLRRHRGDARNIVGLVVTFASSKGADVDWLLRPDQAQLSPPGQVIGYAEHFDETWASQVRDRIM
Ga0181509_131149513300016701PeatlandMNRSRVIADIRRHRGDARNIVRLLMNFASSKEADLDWLLRPDQAQLAPPGQIIGISEQFDLAWSHQVRDRIKQLAQ
Ga0181507_113974313300016705PeatlandMIQSRVFADIRRHRGYAKNIVGLIESFASSNGATIDWLLRPDQAQLSPPGQVIGYSEQFDPTWASQVRDRSGATRQGSQT
Ga0181507_124384223300016705PeatlandMSVSRVIADIRRHRGDARNIIGLIGNFASVKGADVDWLVRPDQAHLSPPGSVIGYSEQYDPSWANRLRDRIVQLSQSETGAS
Ga0181507_133766223300016705PeatlandMNRSRVIADIRRHRGDARNIVRLLMNFASSKEADLDWLLRPDQAQLAPPGQIIGLSEQFDLTWSHQVRDRIKQLAQSESG
Ga0181500_113361813300016728PeatlandMSRSRVIADIRRHRGDARNIIGLVMAFASSKEADVDWLVRPDQAHLAPPGQVIGYADQYDQNWPLRVRDRL
Ga0181515_117895713300016730PeatlandMNRSRVIADIRRHRGDARNIVRLLMNFASSKEADLDWLLRPDQAQLAPPGQIIGLSEQFDLTWSHQVRDRIK
Ga0181505_1084920413300016750PeatlandMIQSRVFADIRRHRGYAKNIVGLIESFASSNGATIDWLLRPDQAQLSPPGQVIGYSEQFDPTWASQVRDRIAQLTQSESGASFWV
Ga0181501_116080313300019230PeatlandMRFRVFADLRRHRGDARNIVGLVVTFASSKGADVDWLLRPDQAQLSPPGQVIGYAEHFDETWASQVRDRIMQLAQNE
Ga0181501_121479023300019230PeatlandMIQSRVFADIRRHRGYAKNIVGLIESFASSNGATIDWLLRPDQAQLSPPGQVIGYSEQFDPTWASQVRDRIA
Ga0180114_112296413300019232Groundwater SedimentMKRSHVIADIRRHRGNANNIIGLIGHFASSKEADIDWLVRPDQAHLALPGQIIGYAEQYDQSWSRRVRE
Ga0181510_117405923300019240PeatlandMRSRVFADLRRHRGDATNIVGLIATFASDKEADADWLLRPDQAQLSPPGQVIGYSEHFDETWAAQVRDR
Ga0181510_117657523300019240PeatlandMSRSRVIADIRRHRGDARYIIGLVVAFASAKDADIDWLVSPDQARLCPPGQIIGTADQYDLSWPLRIRERLLQ
Ga0181510_126425323300019240PeatlandMSRSRVIADLRRHRGDARNIIGLVANFAASKAADADWLVRPDQAHLLPPGQIIGTSDQYDQSWSQRLSERIA
Ga0181502_100236023300019242PeatlandMSASLVFADIRRHRGDARNIIGLIGNFASVAGANVDWLLRPDQTYLSPPGTVIGYSEQFDPAWVNRIRDR
Ga0181502_111478013300019242PeatlandMRFRVFADLRRHRGDARNIVGLVVTFASSKGADVDWLLRPDQAQLSPPGQVIGYAEHFDETWASQVRDRIMQLAQ
Ga0181502_115760013300019242PeatlandMSRSRVIADLRRHRGDARNIIGLVANFAASKAADADWLVRPDQAHLLPPGQIIGTSDQYDQSWSQRL
Ga0181502_149850113300019242PeatlandMSRSRVIADIRRHRGDARNIIGLVMAFASSKEADVDWLVRPDQAHLAPPGQVIGYADQYDQNWPLR
Ga0180111_103912913300019244Groundwater SedimentMNRSRVIADIRRHRGDARNIIGLIGNFASSKEAAVDWLVRPDQAHLTLPGQIFGYSEQYDQSWSHRVR
Ga0184648_125413313300019249Groundwater SedimentMNRSRVIADIRRHRGDARNIIGLIGNFASSKEAVVDWLVRPDQAHLTLPGQIFGYSEQYDQSWSHR
Ga0181508_103877223300019256PeatlandMSVSRVIADIRRHRGDARNIIGLIGNFASVKGADVDWLVRPDQAHLSPPGSVIGYSDQYDPSWANRLRDRIVQLSQGDPGGSF
Ga0181508_115600923300019256PeatlandMIQSRVFADIRRHRGYAKNIVGLIESFASSNGATIDWLLRPDQAQLSPPGQVIGYSEQFDPTWASQVRDRI
Ga0181508_134303813300019256PeatlandMSRSRVIADIRRHRGDARNIIGLVMAFASSKEADVDWLVRPDQAHLAPPGQVIGYADQYDQNWPLRVRDRLL
Ga0181504_116220613300019258PeatlandMIQSRVFADIRRHRGYAKNIVGLIESFASSNGATIDWLLRPDQAQLSPPGQVIGYSEQFDPTWASQVRDRIAQLT
Ga0181504_116423723300019258PeatlandMSVSRVIADIRRHRGDARNIIGLIGNFASVKGADVDWLVRPDQAHLSPPGSVIGYSEQYDPSWANRLRDRIVQ
Ga0181504_127412523300019258PeatlandMSRSRVIADLRRHRGDARNIIGLVANFAASKAADADWLVRPDQAHLLPPGQIIGTSDQYDQSWSQRLSE
Ga0181504_131665623300019258PeatlandMRSRVFADLRRHRGDATNIVGLIATFASDKEADADWLLRPDQAQLSPPGQVIGYSEHFDETWAAQVRDRITQEAQNE
Ga0181506_102684923300019260PeatlandMRSRVFADLRRHRGDATNIVGLIATFASDKEADADWLLRPDQAQLSPPGQVIGYSEHFDETWAAQVRDRITQ
Ga0181506_117499113300019260PeatlandMNRSRVIADIRRHRGDARNIVRLLMNFASSKEADLDWLLRPDQAQLAPPGQIIGISEQFDLAWSHQVRDRIKQLAQSESG
Ga0181506_125126213300019260PeatlandMSRSRVIADIRRHRGDARYIIGLVVAFASAKDADIDWLVSPDQARLCPPGQIIGTADQYDLSWPLRIRERLLQLSQSETGGSLWVLSYDAAVRVVAEK
Ga0181506_134772433300019260PeatlandMSASLVFADIRRHRGDARNIIGLIGNFASVAGANVDWLLRPDQTYLSPPGTVIGYSEQFDPAWVNRIRDRIVQIA
Ga0181506_135876223300019260PeatlandMSRSRVIADLRRHRGDARNIIGLVANFAASKAADADWLVRPDQAHLLPPGQIIGTSDQYDQSWSQRLSERIAQ
Ga0181506_142543913300019260PeatlandMSVSRVIADIRRHRGDARNIIGLIGNFASVKGADVDWLVRPDQAHLSPPGSVIGYSEQYDPSWANRLRDRIVQLSQSETG
Ga0181514_103699513300019268PeatlandMSRSRVIADIRRHRGDARNIIGLVVAFASAKDADIDWLVSPDQARLCPPGQIIGTADQY
Ga0181514_103760813300019268PeatlandMSRSRVIADIRRHRGDARYIIGLVVAFASAKDADIDWLVSPDQARLCPPGQIIGTADQY
Ga0181514_127854213300019268PeatlandMSVSRVIADIRRHRGDARNIIGLIGNFASVKGADVDWLVRPDQAHLSPPGSVIGYSEQYDPSWANRLRDRIVQLSQSETGASFW
Ga0181514_164324913300019268PeatlandMSRSHVIADLRRHRGDARNIIGLVTNFVADKAANVDWLVRPDQAHLLPPGQIIGKSDQYDQSWSVRLSERIAQVAQNE
Ga0181512_115453923300019270PeatlandMSRSRVIADLRRHRGDARNIIGLVANFAASKAADADWLVRPDQAHLLPPGQIIGTSDQYDQSWSQRLSERIAQVTQ
Ga0181512_171623513300019270PeatlandMIQSRVFADIRRHRGYAKNIVGLIESFASSNGATIDWLLRPDQAQLSPPGQVIGYSEQFDPTW
Ga0242644_102054313300022498SoilMSVSRVFADIRRHRGDARNIIGLIGNFASVKGADVDWLVRPDQAHLSPPGSVIGYSEQYDPSWANRLRDRIVQLSQNESG
Ga0242644_102092123300022498SoilMSKSRVIADIRRHRGYARNIIGLIANFASSEEADVDWLVRPDQAHLSPPGQIIGSSDQYDQTWSSRIRDQR
Ga0242643_11108213300022500SoilMSRSRIVADIRRHRGDARNIVGLLASFAAEKEADVDWLLRPDQAQLSPPGQIIGSSELYDQTWSNRIRDHIL
Ga0242647_102510323300022505SoilMSRSRVIADLRRHRGDARNIIGLVANFASSKGADVDWLVRPDQVHLLPPGQIIGSSDQYDQSWS
Ga0222729_104082613300022507SoilMSVSRVFADIRRHRGDARNIIGLIGNFASVKGADVDWLVRPDQAHLSPSGSVIGYSDQYDPSWAN
Ga0222728_106280913300022508SoilMSRSRVVVDLRRHKGDARNIIGLVANFASSKEADVDWLVRPDQAHLSPPGQIIGYADQYDQSWSNRIRERITQL
Ga0222728_107722313300022508SoilMSRSRVIADIRRHRGDARNIVTLLANFASSKEADLDWLLRPDQAQLAPPGEVIGYSEQFDQTWVHQVRDRIA
Ga0242649_106129513300022509SoilMSRSRVITDLRRHRGDARNIIGLVANFAASKAADVDWLVRPDQAHLLPPGQIIGTSDQYDQSWLQRLAERIAQ
Ga0242652_102958823300022510SoilMSRSRVIADIRRHRGDARNIVGLIANFASSKDADVDWLLRPDQAQLAPPGHVIGYSEHSD
Ga0242676_104677523300022512SoilMSRSRVIADLRRHRGDTRNIIGLVANFAVSKEADVDWLVRPDQAHLLPPGQIIGTSDQYDQSWSQRLAERIAQ
Ga0242659_106405713300022522SoilMSVSRVFADIRRHRGDARNIIGLIGNFASVKGADVDWLVRPDQAHLSPPGSVIGYSEQYDPSWANRLRDRIVQLSQNESGGSFWV
Ga0242659_107056213300022522SoilMSRSRVIADLRRHRGDARNIIGLVANFAASKAADVDWLVRPDQAHLLPPGQIIGTSDQYDQSWSQRLAERIA
Ga0242663_107798913300022523SoilMGQSRVIADIRRHRGEARNIIALIGDFASSKGASVDWLVRQDQSHLVPPDQVLGCSEQYDLSGLRQVR
Ga0242669_106823313300022528SoilMSVSRVFADIRRHRGDARNIIGLIGNFASVKGADVDWLVRPDQAHVSPPGSVIGYSEQYDPSWANRLRDR
Ga0242668_112492213300022529SoilMGRSRVIADLRRHRGDARNIIGLVGNFAASKGADVDWLVRPDQAHLLPPGQIIGTSDQYDQSWSQRLAERIAQVTQ
Ga0242658_108127013300022530SoilMSVSRVLADIRRHRGDARNIIGLIGNFASVKGADVDWLVRPDQAHLSPPGSVIGYSEQYEPWANRLRD
Ga0242658_115951713300022530SoilMSRSRVIADLRRHRGDARNIIGLVANFAASKAADVDWLVRPDQAHLLPPGQIIGTSDQYDQSWSQRLAER
Ga0242655_1010728013300022532SoilMSRSRVIADLRRHRGDARNIIGLVANFAASKAADVDWLVRPDQAHLLPPGQIIGTSDQYDQSWLQRLAERIAQVTQTES
Ga0242662_1021439213300022533SoilMSRSRVIADLRRHRGDARNIIGLVANFAASKAADADWLVRPDQAHLIPPGQIIGTSDQYD
Ga0242674_103901223300022711SoilMSRSRVIADLRRHRGDARNIIGLVANFAASKAADVDWLVRPDQAHLLPPGQIIGTSDQYD
Ga0242653_104974623300022712SoilMSKSRVIADIRRHRGYARNIIGLIANFASSEEADVDWLVRPDQAHLSPPGQIIGSSDQYDQTWSSRIRDQLTQMTQNGTG
Ga0242677_102911213300022713SoilMSRSRVITDLRRHRGDARNIIGLVANFAASKAADVDWLVRPDQAHLLPPGQIIGTSDQYDQSW
Ga0242671_105775823300022714SoilMGRSRVIADLRRHRGDARNIIGLVGNFAASKGADVDWLVRPDQAHLLPPGQIIGTSDQYDQSWSQRLAERIA
Ga0242666_108371413300022721SoilMSRSRVIADLRRHRGDARNIIGLVANFAANKATDVDWLVRPDQAHLLPPGQIIG
Ga0242666_110368713300022721SoilMNRSRVIADIRRHRGDARNIIGLIGNFASSKDADIDWLVRPDQAHLARPGQIIGYSEQHDQSWSYRVRERIV
Ga0242657_105542923300022722SoilMSQSRVIADIRRHRGFARNIIGLIGNFALSKGADVDWLVRPDQAHLSPPGQIIGISDQYDQIWSNRIRDQ
Ga0242657_116991313300022722SoilMSVSRVLADIRRHRGDARNIIGLIGNFASVKGADVDWLVRPDQAHLSPPGSVIGYSEQYDPSWANRLRDRIVQASQSEPG
Ga0242665_1012825613300022724SoilMSRSRVIADLRRHRGDARNIIGLVANFAASKAADVDWLVRPDQAHLLPPGQIIGTSDQYDQSWSQRLAERIAQVAQNESGGSVWVFFV
Ga0242665_1022692813300022724SoilMSRSRVIADLRRHRGDARNIVGLVTSFASGKDADVDWLVRPDQAHLPPPGQIIGVADQYDLSWSNRIRER
Ga0242654_1024153823300022726SoilMSVSRVFADIRRHRGDARNIIGLIGNFASVKGADVDWLVRPDQAHLSPSGSVIGYSDQYDPSWANRLRDRIVQ
Ga0265750_106022723300030813SoilMSRSRVIADLRRHRGDTRNIIGLVSNFAASNGADVDWLVRPDQAHLLPPGQIIGTADQYD
Ga0265766_101114113300030863SoilMSRSRVIADLRRHRGDARNIIGLVANFAASKAADVDWLVRPDQAHLLPPGQIIGTSDQYDQSWSQRLAE
Ga0265769_11201113300030888SoilMGRSHVIADLRRHRGDARNIIGLVGIFAASKGADVDWLVRPDQAHLLPPGQIIGVSDQYDQSWSQRLTE
Ga0265768_10799423300030963SoilMSKSRIVADIRRHRGYARNIIGLIGNFASSKEADVDWLVRPDQAHLSPGQTIGISDQYDQTWSNRIREQP
Ga0099845_144727113300030975Boreal Forest SoilMNRSRVIADIRRHRGDARNIIGLIGNFASSKEAAVDWLVRPDQAHLTLPGQIFGYSEQYDQSWSHRVRER
Ga0308194_1029667313300031421SoilLNRSRVIADIRRHRGDARNIIGLIGNFASSKEAVVDWLVRPDQAHLTLPGQIFGYSEQYDQSWSHRVRERIAQTA
Ga0348332_1379093423300032515Plant LitterMSKSRIVADIRRHRGYARNIIGLIGNFASSKEADVDWLVRPDQAHLSPGQTIGISDQYDQTWSNRIREQLTQMA


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