NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F092968

Metagenome Family F092968

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F092968
Family Type Metagenome
Number of Sequences 106
Average Sequence Length 47 residues
Representative Sequence MRESLGSEGIWTHGLGGGRRRDVEDAGVDREWRPDVTSGRRRVQSNG
Number of Associated Samples 5
Number of Associated Scaffolds 106

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Eukaryota
% of genes with valid RBS motifs 88.68 %
% of genes near scaffold ends (potentially truncated) 11.32 %
% of genes from short scaffolds (< 2000 bps) 16.04 %
Associated GOLD sequencing projects 5
AlphaFold2 3D model prediction Yes
3D model pTM-score0.14

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Eukaryota (76.415 % of family members)
NCBI Taxonomy ID 2759
Taxonomy All Organisms → cellular organisms → Eukaryota

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza
(100.000 % of family members)
Environment Ontology (ENVO) Unclassified
(100.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Unclassified
(64.151 % of family members)



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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 0.00%    Coil/Unstructured: 100.00%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.14
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 106 Family Scaffolds
PF00078RVT_1 7.55
PF12796Ank_2 5.66
PF07727RVT_2 4.72
PF05970PIF1 2.83
PF14223Retrotran_gag_2 2.83
PF05699Dimer_Tnp_hAT 1.89
PF00385Chromo 1.89
PF00098zf-CCHC 1.89
PF00665rve 1.89
PF13843DDE_Tnp_1_7 0.94
PF11816DUF3337 0.94
PF00125Histone 0.94
PF13961DUF4219 0.94
PF13358DDE_3 0.94
PF00692dUTPase 0.94
PF13650Asp_protease_2 0.94
PF00004AAA 0.94
PF13391HNH_2 0.94
PF01565FAD_binding_4 0.94
PF01532Glyco_hydro_47 0.94
PF14214Helitron_like_N 0.94
PF01055Glyco_hydro_31 0.94

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 106 Family Scaffolds
COG0507ATPase/5’-3’ helicase helicase subunit RecD of the DNA repair enzyme RecBCD (exonuclease V)Replication, recombination and repair [L] 2.83
COG2801Transposase InsO and inactivated derivativesMobilome: prophages, transposons [X] 1.89
COG2826Transposase and inactivated derivatives, IS30 familyMobilome: prophages, transposons [X] 1.89
COG3316Transposase (or an inactivated derivative), DDE domainMobilome: prophages, transposons [X] 1.89
COG4584TransposaseMobilome: prophages, transposons [X] 1.89
COG0717dCTP deaminaseNucleotide transport and metabolism [F] 0.94
COG0756dUTP pyrophosphatase (dUTPase)Defense mechanisms [V] 0.94
COG1501Alpha-glucosidase/xylosidase, GH31 familyCarbohydrate transport and metabolism [G] 0.94


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms76.42 %
UnclassifiedrootN/A23.58 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300028786|Ga0307517_10000013All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales225673Open in IMG/M
3300028786|Ga0307517_10000234All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Tuberaceae94062Open in IMG/M
3300028786|Ga0307517_10000313All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Tuberaceae84259Open in IMG/M
3300028786|Ga0307517_10000555All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina63863Open in IMG/M
3300028786|Ga0307517_10000818All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales53592Open in IMG/M
3300028786|Ga0307517_10001068All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales46468Open in IMG/M
3300028786|Ga0307517_10001082All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Tuberaceae → Tuber → Tuber borchii46154Open in IMG/M
3300028786|Ga0307517_10001129All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Tuberaceae45119Open in IMG/M
3300028786|Ga0307517_10001183All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Tuberaceae43950Open in IMG/M
3300028786|Ga0307517_10001385All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina40715Open in IMG/M
3300028786|Ga0307517_10001776All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina35526Open in IMG/M
3300028786|Ga0307517_10002826All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi27576Open in IMG/M
3300028786|Ga0307517_10002988All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Tuberaceae26725Open in IMG/M
3300028786|Ga0307517_10003171All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Tuberaceae25842Open in IMG/M
3300028786|Ga0307517_10003752All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Tuberaceae → Choiromyces → Choiromyces venosus → Choiromyces venosus 120613-123610Open in IMG/M
3300028786|Ga0307517_10004834All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya20539Open in IMG/M
3300028786|Ga0307517_10006285All Organisms → cellular organisms → Eukaryota → Opisthokonta17647Open in IMG/M
3300028786|Ga0307517_10007789All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Morchellaceae → Morchella → Morchella sect. Distantes15538Open in IMG/M
3300028786|Ga0307517_10009477All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Tuberaceae → Choiromyces → Choiromyces venosus → Choiromyces venosus 120613-113792Open in IMG/M
3300028786|Ga0307517_10010749All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Tuberaceae12760Open in IMG/M
3300028786|Ga0307517_10016105All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Tuberaceae → Tuber → Tuber borchii9859Open in IMG/M
3300028786|Ga0307517_10018366All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Tuberaceae → Tuber → Tuber borchii9050Open in IMG/M
3300028786|Ga0307517_10019091All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Tuberaceae → Choiromyces → Choiromyces venosus → Choiromyces venosus 120613-18822Open in IMG/M
3300028786|Ga0307517_10021926All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Tuberaceae8035Open in IMG/M
3300028786|Ga0307517_10036309All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Tuberaceae5546Open in IMG/M
3300028786|Ga0307517_10043644All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Tuberaceae → Tuber → Tuber borchii4768Open in IMG/M
3300028786|Ga0307517_10083523Not Available2698Open in IMG/M
3300028794|Ga0307515_10051532Not Available6134Open in IMG/M
3300028794|Ga0307515_10052414All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Tuberaceae → Tuber → Tuber borchii6051Open in IMG/M
3300028794|Ga0307515_10094039All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Tuberaceae → Tuber → Tuber borchii3708Open in IMG/M
3300028794|Ga0307515_10134730Not Available2694Open in IMG/M
3300028794|Ga0307515_10196557Not Available1907Open in IMG/M
3300028794|Ga0307515_10210029Not Available1794Open in IMG/M
3300028794|Ga0307515_10214141Not Available1762Open in IMG/M
3300028794|Ga0307515_10214704Not Available1758Open in IMG/M
3300028794|Ga0307515_10266856All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Tuberaceae → Tuber → Tuber borchii1439Open in IMG/M
3300028794|Ga0307515_10294863Not Available1313Open in IMG/M
3300028794|Ga0307515_10338254Not Available1159Open in IMG/M
3300031456|Ga0307513_10000157All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Tuberaceae97442Open in IMG/M
3300031456|Ga0307513_10001036All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Tuberaceae40301Open in IMG/M
3300031456|Ga0307513_10001989All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Tuberaceae28938Open in IMG/M
3300031456|Ga0307513_10002178All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Tuberaceae → Tuber → Tuber borchii27388Open in IMG/M
3300031456|Ga0307513_10003945All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Tuberaceae19928Open in IMG/M
3300031456|Ga0307513_10004018All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Tuberaceae19732Open in IMG/M
3300031456|Ga0307513_10005005All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Tuberaceae → Tuber → Tuber borchii17560Open in IMG/M
3300031456|Ga0307513_10005124All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Morchellaceae → Morchella17345Open in IMG/M
3300031456|Ga0307513_10006333All Organisms → cellular organisms → Eukaryota15496Open in IMG/M
3300031456|Ga0307513_10007265All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Morchellaceae → Morchella → Morchella sect. Distantes14385Open in IMG/M
3300031456|Ga0307513_10010743All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Morchellaceae → Morchella11444Open in IMG/M
3300031456|Ga0307513_10012949All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Tuberaceae → Tuber → Tuber borchii10255Open in IMG/M
3300031456|Ga0307513_10014916All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Tuberaceae9442Open in IMG/M
3300031456|Ga0307513_10015975All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Tuberaceae9079Open in IMG/M
3300031456|Ga0307513_10019410All Organisms → cellular organisms → Eukaryota8093Open in IMG/M
3300031456|Ga0307513_10025070Not Available6921Open in IMG/M
3300031456|Ga0307513_10031867All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Tuberaceae → Tuber → Tuber borchii5958Open in IMG/M
3300031456|Ga0307513_10035894All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Tuberaceae → Tuber → Tuber borchii5540Open in IMG/M
3300031456|Ga0307513_10055576All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Tuberaceae → Tuber → Tuber borchii4234Open in IMG/M
3300031456|Ga0307513_10055917Not Available4218Open in IMG/M
3300031456|Ga0307513_10104160Not Available2851Open in IMG/M
3300031456|Ga0307513_10176679Not Available2004Open in IMG/M
3300031456|Ga0307513_10191473All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Tuberaceae → Choiromyces → Choiromyces venosus → Choiromyces venosus 120613-11896Open in IMG/M
3300031456|Ga0307513_10281885All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Tuberaceae → Tuber → Tuber borchii1438Open in IMG/M
3300031456|Ga0307513_10363858Not Available1190Open in IMG/M
3300031456|Ga0307513_10578454All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi833Open in IMG/M
3300031507|Ga0307509_10000849All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales52614Open in IMG/M
3300031507|Ga0307509_10001272All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Tuberaceae → Tuber → Tuber borchii42794Open in IMG/M
3300031507|Ga0307509_10002306All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Tuberaceae31108Open in IMG/M
3300031507|Ga0307509_10002519All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales29535Open in IMG/M
3300031507|Ga0307509_10002555All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Tuberaceae29237Open in IMG/M
3300031507|Ga0307509_10003389All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Morchellaceae → Morchella24264Open in IMG/M
3300031507|Ga0307509_10004086All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Tuberaceae21374Open in IMG/M
3300031507|Ga0307509_10005059All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Tuberaceae18557Open in IMG/M
3300031507|Ga0307509_10007042All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Tuberaceae → Choiromyces → Choiromyces venosus → Choiromyces venosus 120613-114871Open in IMG/M
3300031507|Ga0307509_10008998All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Tuberaceae12590Open in IMG/M
3300031507|Ga0307509_10013717All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Tuberaceae9568Open in IMG/M
3300031507|Ga0307509_10031792All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Tuberaceae5823Open in IMG/M
3300031507|Ga0307509_10046225All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Tuberaceae → Tuber → Tuber borchii4687Open in IMG/M
3300031507|Ga0307509_10049263All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Morchellaceae → Morchella → Morchella sect. Distantes4517Open in IMG/M
3300031507|Ga0307509_10056963All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Tuberaceae → Tuber → Tuber borchii4145Open in IMG/M
3300031507|Ga0307509_10106656All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina2819Open in IMG/M
3300031507|Ga0307509_10140840Not Available2347Open in IMG/M
3300031507|Ga0307509_10558584Not Available821Open in IMG/M
3300031507|Ga0307509_10695362Not Available683Open in IMG/M
3300033180|Ga0307510_10001161All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Tuberaceae28363Open in IMG/M
3300033180|Ga0307510_10003687All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Tuberaceae → Tuber → Tuber borchii17884Open in IMG/M
3300033180|Ga0307510_10003794All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Tuberaceae17681Open in IMG/M
3300033180|Ga0307510_10004795All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Morchellaceae → Morchella → Morchella sect. Distantes16006Open in IMG/M
3300033180|Ga0307510_10008418All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Tuberaceae12290Open in IMG/M
3300033180|Ga0307510_10015038All Organisms → cellular organisms → Eukaryota9153Open in IMG/M
3300033180|Ga0307510_10022828All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Tuberaceae → Tuber → Tuber borchii7257Open in IMG/M
3300033180|Ga0307510_10025956All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Tuberaceae → Tuber → Tuber borchii6747Open in IMG/M
3300033180|Ga0307510_10028948All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Tuberaceae → Tuber6314Open in IMG/M
3300033180|Ga0307510_10035766All Organisms → cellular organisms → Eukaryota5538Open in IMG/M
3300033180|Ga0307510_10053384Not Available4249Open in IMG/M
3300033180|Ga0307510_10054339Not Available4196Open in IMG/M
3300033180|Ga0307510_10058168All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda4006Open in IMG/M
3300033180|Ga0307510_10060274Not Available3907Open in IMG/M
3300033180|Ga0307510_10061123Not Available3867Open in IMG/M
3300033180|Ga0307510_10080128All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Tuberaceae → Tuber → Tuber borchii3177Open in IMG/M
3300033180|Ga0307510_10106679Not Available2563Open in IMG/M
3300033180|Ga0307510_10112441Not Available2460Open in IMG/M
3300033180|Ga0307510_10119170All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Tuberaceae → Tuber → Tuber borchii2350Open in IMG/M
3300033180|Ga0307510_10170970All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Tuberaceae → Tuber → Tuber magnatum1752Open in IMG/M
3300033180|Ga0307510_10241513Not Available1300Open in IMG/M
3300033180|Ga0307510_10372886Not Available873Open in IMG/M
3300033180|Ga0307510_10448322All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Morchellaceae → Morchella731Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
EctomycorrhizaHost-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza100.00%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300028786Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EMHost-AssociatedOpen in IMG/M
3300028794Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EMHost-AssociatedOpen in IMG/M
3300031456Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EMHost-AssociatedOpen in IMG/M
3300031507Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EMHost-AssociatedOpen in IMG/M
3300033180Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EMHost-AssociatedOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0307517_1000001323300028786EctomycorrhizaMRESLGSEGIWTHALGGGRRRDVEGAGVDGEWRPDVTSGRCRLLSNG
Ga0307517_100002341063300028786EctomycorrhizaMHDSLGSEGIWTHGLGGGRRRDVEDAVVDREWLPDVTSGRRRVQSNG
Ga0307517_10000313793300028786EctomycorrhizaMRKSLGSESIWTHALGGGRRRDVEDAGVYGEWRPDVTSGRRRVQSNG
Ga0307517_10000555723300028786EctomycorrhizaVIFGMRESSGSEGIWTHALGAGRRRVVEDAGVDKERRPDVTSGRRRVQSNG
Ga0307517_1000081813300028786EctomycorrhizaVGMRESLGSEGIWTHGLGGGRRRDVEDAGVDREWRPDVTSGRCRVQSNG
Ga0307517_10001068393300028786EctomycorrhizaMRESFGSERIWTHALGGGGRRDAADAGVDGEWRPDGTSGRSRVQSNS
Ga0307517_10001082163300028786EctomycorrhizaMRESYGSEGIWPHALGGGRRRDIEDPGVDREWLPDVKSRRRRVQSNV
Ga0307517_10001129353300028786EctomycorrhizaMRESFGSEGMWTHALGGGRRRDVEDAGVDGEWHPDLMSSRRRVQSNG
Ga0307517_1000118313300028786EctomycorrhizaKEIVGMRESLGSEGIWTHGLGGGRRRDVEDAGVDREWRPDVMSGRRRVQSNG
Ga0307517_10001385533300028786EctomycorrhizaMRESLRSEGIWTHAVRGGRRRDFKDAGVHGEWRPDVTSGRRGIQSNG
Ga0307517_1000177623300028786EctomycorrhizaMRESLGSEGIWTHGLGGGRRGDVEDAGVDREWRPDVTSGRRSVQSNG
Ga0307517_1000282663300028786EctomycorrhizaMRESLGSEGIWTHALGGARRRDVEDAGVDREWRPDVMSGRRRVQSNG
Ga0307517_10002988263300028786EctomycorrhizaMRDSLGSEGIWTHALGGGRRWDVEDAGVDREWRPDVTSGLRRVQSNG
Ga0307517_10003171163300028786EctomycorrhizaMRESIGSEGIWVHGLGGGRRRDVEDAGVDREWRADVTSGQGRVQSQG
Ga0307517_1000375213300028786EctomycorrhizaHRKEIVGMRESLGSEGIWTHGLGGGRRRDVEDAGVDREWRPDMTSGRRRVQSNG
Ga0307517_10004834273300028786EctomycorrhizaMRESLGSEGIWTHGLGGRCRRGVEDAGVDREWRPDVTSGRRRVQSNG
Ga0307517_1000628523300028786EctomycorrhizaMPESLGSEGIWTHALGGGRRRDVEDAGVDREWRPDVTSGRRRVQTNG
Ga0307517_1000778913300028786EctomycorrhizaMRESLGSEGICTHGLGGGRRRDVEDAGVDREWRPNVTSGRRCFQSNG
Ga0307517_1000947723300028786EctomycorrhizaMRESLGSEGIWTHGLGGRRRWDVEDAGVDREWRPDVTSSRRRVQSNG
Ga0307517_10010749143300028786EctomycorrhizaMRESLGSEGIWTHGLGGGRRQDVEDAGVDREWRPEVTSGGRRVQSNS
Ga0307517_1001610523300028786EctomycorrhizaMRESLGSEAIWTHGLGGGRRRDFADAGVDREWHPHVTSGRRRVQSNG
Ga0307517_1001836683300028786EctomycorrhizaMWESLGSEAIWTHALGGGRRRDVEDAGVDREWCPDVTSGRRRVQGNG
Ga0307517_1001909113300028786EctomycorrhizaMRERLASEGIWTHGLGGGRCRAVEDAGVAREWRPDVTSGRRRIQSNG
Ga0307517_1002192613300028786EctomycorrhizaMRESFGSEGIWTHGLGGGRRPDVEDAGVDREWRPDVASGRRRIQSNG
Ga0307517_1003630973300028786EctomycorrhizaMRQSLCSEGIWTHGLGGGHRRDVEDAGVDREWRPDVTSGRRRVQSNG
Ga0307517_1004364463300028786EctomycorrhizaMRKSLGSEGIWTHALGGGRRRDVDDAGADRECCPDVTSGRHRVQSNG
Ga0307517_1008352313300028786EctomycorrhizaMRESLGSEGIWTHALGGGRRWDVEDAGVDREWRPDVTSGRRRVQSNG
Ga0307515_1005153243300028794EctomycorrhizaMRESLGSEGIWTHALGGGCRRDVEDAGVDREWPPDVTSGRRRVQSKG
Ga0307515_1005241453300028794EctomycorrhizaMWESLGSEGIRTHALGCGRRRDVEDTGVDGEWRPDVTSG
Ga0307515_1009403953300028794EctomycorrhizaMRECLGSEGIWTHALGGGRRQDVEYAGVNREWRPQVRSGRRRVQSNR
Ga0307515_1013473013300028794EctomycorrhizaMPKPESLGSEGIWTHALGGGHRRDVEAAGVDGEWRPDVTSNQCRVQSNG
Ga0307515_1019655723300028794EctomycorrhizaMRESLGSEGIWTNGLGGGRRRDVEDAGVHMEWRPDVTSGRRRVQSNG
Ga0307515_1021002923300028794EctomycorrhizaMWESLGAEGIWKHALGGGRRRDVEEAGIDGEWHPDITSGQLHVESNR
Ga0307515_1021414123300028794EctomycorrhizaMRESLGSVGIGTHALGGGCRRDVEDAGVDGEWRPDVTSAQGCIQSNG
Ga0307515_1021470413300028794EctomycorrhizaMEIVGMRESLESEGIWTHTLGGGRHQDFEDAGLDREWHPDVTSGRYRVQSNI
Ga0307515_1026685613300028794EctomycorrhizaMMRESLGSEGIWTHALGGGRRRDVEDVGVDEEWCPDVTSGRRRVLNNG
Ga0307515_1029486313300028794EctomycorrhizaMRESLGSESIGTHARRGGRRRDVEDAGVDMDGVRTWRTDLTSGRLHVLSKG
Ga0307515_1033825413300028794EctomycorrhizaMRKSLGSEGIWTHGLGGGRRRDVEDAGVDREWRPDVTSGRCRVQSNG
Ga0307513_10000157393300031456EctomycorrhizaMWESLGAEGIWKHALGGGHRRDIEEADIDGKWHPDVTSGQHPVQSNG
Ga0307513_1000103693300031456EctomycorrhizaMRESLGSEGIWTHALGGGRGQEIEDAGVYGEWRPDVMSGRCGIQSNG
Ga0307513_10001989153300031456EctomycorrhizaMRESLGSEGIWTHALGGGRGRDVEDAGVDGEWRPDVTFGRRRVQSNG
Ga0307513_10002178363300031456EctomycorrhizaMRESLVSEGIWTHGLGGGRRRDVKDAGVDREWRLDVMSGRHRVQSNG
Ga0307513_1000394543300031456EctomycorrhizaMRESFLSDGIWTHSLGGGRRRNFAEAGVDGKWCPEVTSSRYPVQSNG
Ga0307513_10004018223300031456EctomycorrhizaMRESLGSEGIWTHALGGGRRRDVEDGGLDREWRPDVMSGQPCHQSNG
Ga0307513_10005005143300031456EctomycorrhizaMRESLGSEGIWTHVLGGGRGRDVEDPGVDREWRPEVTAGRRRIQSNG
Ga0307513_1000512433300031456EctomycorrhizaMRESLGSEGIWTHGLGGGRRRDVEDAGVDREWRPDLTFGRRRIPE
Ga0307513_1000633313300031456EctomycorrhizaHRKEIVGMRESLGSEGIWTHGLGGGRRRDVEDAGVDREWRPDVTSGRRRVQSNG
Ga0307513_1000726523300031456EctomycorrhizaMRESLGSEGIWTHGLGGGRRRDVEEAGVDREWRPDVTSGRRRVQSNA
Ga0307513_1001074333300031456EctomycorrhizaMQESLGSEGIWMHALGGGRRRDVEDAGVDGEWRPDMTSSRPRVLSNG
Ga0307513_1001294933300031456EctomycorrhizaMRESLGSEGIWMHAVGARRRHVEDAGLDGEWRPDVTSDRRHIQSNG
Ga0307513_1001491623300031456EctomycorrhizaMRESLGSEGIWTHGLGGGRRRDVEHAGVDREWRPDITSGRRRVQSNG
Ga0307513_10015975103300031456EctomycorrhizaVSEGIWTHAVGGGRRQDVDNGGVDREWRLDVTSGRRWVQSKG
Ga0307513_1001941013300031456EctomycorrhizaMRESLGSEAIWTHGLGGGRRRDVEDAGLDREWRLDVTSGRRRVQSNG
Ga0307513_10025070163300031456EctomycorrhizaMRESLGSEGIWTHGLGGGRRWDVEDAGVDREWRPDVTSGRRRVQSNG
Ga0307513_1003186733300031456EctomycorrhizaMRESLASEGISTHALGGGRRRDVEDAGVDGEWRPEVTSGRCRVLSNC
Ga0307513_1003589433300031456EctomycorrhizaMWESLGSEGIWTHALGGGHRRDVEDAGVDGEWPPDVTSGRHRFPSNG
Ga0307513_1005557643300031456EctomycorrhizaMRESLRSEGIWTHGLGGGRRRDVQDAGVDREWRLDMTSGRRRVPSNG
Ga0307513_1005591713300031456EctomycorrhizaMLEWRWIPPSRGRHRKEIVGMRESLGSEGIWTHGLGGGRRRDVEDAGLDREWRPDVTSGRRRVHSNG
Ga0307513_1010416023300031456EctomycorrhizaMRESLGSEGIWTHGLGGGRRRDVEDAGVDREWRPDGMSGRRGVQSNC
Ga0307513_1017667943300031456EctomycorrhizaMRESLGSEGIWTHALGGGRRRDFEDAGVDGEWRPDVTFGRRRIQSKG
Ga0307513_1019147343300031456EctomycorrhizaMRESLGSEGIWTHGLGGGRRRDVEDAGVDREWRPDVTSGRRRVQSNG
Ga0307513_1028188523300031456EctomycorrhizaMQESLESEGIWTHGLGGGRRRDVADAGVDREWRPDVTSGRRLIQSNG
Ga0307513_1036385823300031456EctomycorrhizaMRESLGSEGIWTHGLGGGRRRDVEDAGVDREWRPDVTSGRRRVPSNG
Ga0307513_1057845413300031456EctomycorrhizaMRESLGSEGIWMHGLGGGRRREVEDAGVDREWRPHVTSGRRRVQSNG
Ga0307509_10000849403300031507EctomycorrhizaMRESTGSEGIWRHALGGGRRGDVEDAGVDGEWRPDMTSGRRRVQSNS
Ga0307509_1000127213300031507EctomycorrhizaLGSEGIWTHGLGGGRRRDVEDAGVDREWRPDVTSGRRRVQSNS
Ga0307509_1000230623300031507EctomycorrhizaMRESFGSEGIWTHALGGGRRRDVEDAGVDREWRLDVTSGRRRVQSNG
Ga0307509_1000251973300031507EctomycorrhizaMPDSLDSQGIWMDALGGGHRQDLEDGGVDGEWRPHVTSGRRCVQSNA
Ga0307509_1000255543300031507EctomycorrhizaMRESLWSEGIWTHALGRGCGRDVEDAGGAGEWRPDVTFGRRHVQSNG
Ga0307509_10003389233300031507EctomycorrhizaMPESLGSQGIWTHALGGERRRNVKEVGVDGEWRPDVTSSRRRVQSNG
Ga0307509_1000408623300031507EctomycorrhizaMRESLGSEGIWTHGLGGGRRRDVEDAGVDREWRPDVTSGRRHVLSNG
Ga0307509_10005059133300031507EctomycorrhizaMRESLGSEDIWTHVLGGGRRRDIKDTGVDRQWRPEMTSGRRRVQSNG
Ga0307509_10007042183300031507EctomycorrhizaMRESLGSEGIWTHGLGGGRSRDVEDAGVDREWRPDVTSGRRRVQSNG
Ga0307509_10008998103300031507EctomycorrhizaMRERKGSEGIWQHPLGGGHRGHFADAGVDGEWRQDMTSGGHRVQSNG
Ga0307509_1001371723300031507EctomycorrhizaMREILGSEGIWTHGLGGGRRRDVEDAGVDREWRPDVTSGQGRVQSNG
Ga0307509_1003179283300031507EctomycorrhizaIWTHGLGGGRRRDVEDAGVDREWRPDVTSGRRRVQSNG
Ga0307509_1004622533300031507EctomycorrhizaMRESLGSEGIWTHGLGGGRRRDIEDAGVDREWRPDVMSGRRRVQSNG
Ga0307509_1004926333300031507EctomycorrhizaMWESLGSEGIWTHSLRGGRRRDVENAGVDGEWRPDLTCGRRRVQNTG
Ga0307509_1005696343300031507EctomycorrhizaMRKSLGSEGIWTHGLGCGRRRDVEDAGVDREWHPDVTSGRRRVQSNG
Ga0307509_1010665653300031507EctomycorrhizaMRESLGSEGIWTHALGGGRRRDVEDAGVDREWRPDVTSGRPRVQSNG
Ga0307509_1014084013300031507EctomycorrhizaMRESLGSEGIWTHALGGGRRRDVQEAGVDREWRPDGTSGRRRLQSNG
Ga0307509_1055858413300031507EctomycorrhizaMRESLGSEGIWTHGLGGGRRRNVEDAGVDREWCPDVTSGRRRVQSNG
Ga0307509_1069536213300031507EctomycorrhizaMRESLGSAGIWTHALGGGRRRDVEDAGVDREWRPDVTSGRRCVQSNG
Ga0307510_10001161263300033180EctomycorrhizaMKEIVGMRESLGSEGIWTHGLRGGSRRDVEDAGVGREWRPDVTSGRRRVQSNG
Ga0307510_1000368753300033180EctomycorrhizaMRESFGSEGMWTHALGGGRRRDIEDAGVDGEWHPDLMSSRRRVQSNG
Ga0307510_10003794143300033180EctomycorrhizaMPESLGSEGIWTHALGGGHRRDLEAAGVDGEWRPDVTSNQCRVQSNG
Ga0307510_10004795143300033180EctomycorrhizaMRESSGSEGIRTHALGGGRRRDVEDAEVDREWHPDVTSGRPRVQSNS
Ga0307510_1000841873300033180EctomycorrhizaMRESLGSEGIWTHALGGGRGRDVEDAGGDGEWRPDVTFGRRRVQSNG
Ga0307510_1001503863300033180EctomycorrhizaRGRHRKEIVGMRESLGSEGIWTHALGGGRRRDVQDAGVDREWRPDMTSGRRHVQSNG
Ga0307510_1002282833300033180EctomycorrhizaMRERLGSEGIWTHGLGGGRRRDVQDAGVDREWRPDVKSGRRHVQTNN
Ga0307510_1002595643300033180EctomycorrhizaMRGSLGSEGIWTHALGGGRRRDVEDAGVDREWRPDVTSGRRRIQSNG
Ga0307510_1002894813300033180EctomycorrhizaMRESFGSEGIWTHGLGGGRRWDVEDAGVDREWRPDVTSGRRRVQSNG
Ga0307510_1003576633300033180EctomycorrhizaMPESLGSQGIWTHALGGERRRNVKDVGVDGEWRPDVTSSRRRVQSNG
Ga0307510_1005338413300033180EctomycorrhizaMRESLGSQGIWTHGLGGGRRRDVEDAGVDREWRPDVTSGRRRVQSNG
Ga0307510_1005433963300033180EctomycorrhizaMGESLGSEGIWTHALGGGRRRDVEDAGVDRQWRPDVTSG
Ga0307510_1005816813300033180EctomycorrhizaGMRESLGSEGIWPHGLGGGRRRDVEDAGVDREWRPDVTSGRRPVQSNG
Ga0307510_1006027443300033180EctomycorrhizaMRESLGSEGIWRHALGGGRRRDVKDAGVDREWRPDVTSGRPRVQSNR
Ga0307510_1006112363300033180EctomycorrhizaMRESLGSEGIWTQRLGGGRRPDVEDAGVHREWRPDVTSGQRRVQSNG
Ga0307510_1008012853300033180EctomycorrhizaMRESLGSEGIWTHGLGGGRRRDIEDAGVDREWRRDVMSGPRRVQSNG
Ga0307510_1010667923300033180EctomycorrhizaMRESLRSEGIWTHALGGGRRRDVEDAGVDREWRPDVTSGRRRVQSNG
Ga0307510_1011244153300033180EctomycorrhizaESLGSEGIWTHGLGGGRRRDVEDAGVDREWGPDVTSGRRRVQSNG
Ga0307510_1011917013300033180EctomycorrhizaMRESLESAGIWMHALGGGCRRDVEDAGVDGEWRQDVRSGRCRVLSNG
Ga0307510_1017097033300033180EctomycorrhizaMIFLLMEIVGIRESLGSEGIWTHGLGGGRRRDVEDARVDREWRPDVTSGRRRIQSNG
Ga0307510_1024151313300033180EctomycorrhizaGMRESLGSEGIWTHGLGGGRRRDVEDAGVDREWRPDVTSGRCSVQSNG
Ga0307510_1037288613300033180EctomycorrhizaESLGSEGIWTHVLGGGRRRDVKDAGVDREWRPDVTSGRRRVQSNG
Ga0307510_1044832223300033180EctomycorrhizaEIVGMRESLGSEGIWTHGLGGGRRRDVEDAGVDREWRPDVTSGRRRVQSNG


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