Metagenome / Metatranscriptome Family F092939

Basic Information
Family ID	F092939
Family Type	Metagenome / Metatranscriptome
Number of Sequences	107
Average Sequence Length	52 residues
Representative Sequence	NSEATLYPPEEAVKNLIRMSAYMDKKLGSISANRVVDLSILDELGTKRNQRAQR
Number of Associated Samples	101
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	4.67 %
% of genes near scaffold ends (potentially truncated)	85.05 %
% of genes from short scaffolds (< 2000 bps)	85.98 %
Associated GOLD sequencing projects	95
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.39

Most Common Taxonomy
Group	Bacteria (98.131 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (10.280 % of family members)
Environment Ontology (ENVO)	Unclassified (37.383 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (33.645 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 43.90% β-sheet: 0.00% Coil/Unstructured: 56.10%
Feature Viewer

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Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF07311	Dodecin	21.50
PF03641	Lysine_decarbox	11.21
PF03737	RraA-like	5.61
PF09084	NMT1	4.67
PF13676	TIR_2	3.74
PF03807	F420_oxidored	3.74
PF00528	BPD_transp_1	2.80
PF08021	FAD_binding_9	1.87
PF00005	ABC_tran	1.87
PF00182	Glyco_hydro_19	1.87
PF00596	Aldolase_II	1.87
PF07362	CcdA	1.87
PF00575	S1	0.93
PF02353	CMAS	0.93
PF08241	Methyltransf_11	0.93
PF01268	FTHFS	0.93
PF03741	TerC	0.93
PF07969	Amidohydro_3	0.93
PF03884	YacG	0.93
PF01471	PG_binding_1	0.93
PF00903	Glyoxalase	0.93
PF01042	Ribonuc_L-PSP	0.93
PF01979	Amidohydro_1	0.93
PF13426	PAS_9	0.93
PF00072	Response_reg	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG3360	Flavin-binding protein dodecin	General function prediction only [R]	21.50
COG1611	Nucleotide monophosphate nucleosidase PpnN/YdgH, Lonely Guy (LOG) family	Nucleotide transport and metabolism [F]	11.21
COG0684	RNA degradosome component RraA (regulator of RNase E activity)	Translation, ribosomal structure and biogenesis [J]	5.61
COG0715	ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component	Inorganic ion transport and metabolism [P]	4.67
COG4521	ABC-type taurine transport system, periplasmic component	Inorganic ion transport and metabolism [P]	4.67
COG0543	NAD(P)H-flavin reductase	Energy production and conversion [C]	3.74
COG5302	Post-segregation antitoxin (ccd killing mechanism protein) encoded by the F plasmid	Mobilome: prophages, transposons [X]	1.87
COG3979	Chitodextrinase	Carbohydrate transport and metabolism [G]	1.87
COG3179	Chitinase, GH19 family	Carbohydrate transport and metabolism [G]	1.87
COG2375	NADPH-dependent ferric siderophore reductase, contains FAD-binding and SIP domains	Inorganic ion transport and metabolism [P]	1.87
COG1018	Flavodoxin/ferredoxin--NADP reductase	Energy production and conversion [C]	1.87
COG2230	Cyclopropane fatty-acyl-phospholipid synthase and related methyltransferases	Lipid transport and metabolism [I]	0.93
COG2759	Formyltetrahydrofolate synthetase	Nucleotide transport and metabolism [F]	0.93
COG3024	Endogenous inhibitor of DNA gyrase, YacG/DUF329 family	Replication, recombination and repair [L]	0.93
COG2227	2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase	Coenzyme transport and metabolism [H]	0.93
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	0.93
COG0861	Tellurite resistance membrane protein TerC	Inorganic ion transport and metabolism [P]	0.93
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.13 %
Unclassified	root	N/A	1.87 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.13 %
Unclassified	root	N/A	1.87 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.13 %
Unclassified	root	N/A	1.87 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	55.14 %
Unclassified	root	N/A	1.87 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.93 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	35.51 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	10.28 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	6.54 %
Unclassified	root	N/A	1.87 %
Nitrospira	class	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira	0.93 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	35.51 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5.61 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	4.67 %
Unclassified	root	N/A	1.87 %
Nitrospirales	order	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales	0.93 %

Name	Rank	Taxonomy	Distribution
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	29.91 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	4.67 %
Sphaerotilaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Sphaerotilaceae	3.74 %
Syntrophobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales	2.80 %
Unclassified	root	N/A	1.87 %
Nitrospiraceae	family	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae	0.93 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.93 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	29.91 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	4.67 %
Piscinibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Sphaerotilaceae → Piscinibacter	3.74 %
Syntrophaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae	2.80 %
Unclassified	root	N/A	1.87 %
Nitrospira	genus	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	0.93 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.93 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	29.91 %
unclassified Mesorhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium	4.67 %
Piscinibacter defluvii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Sphaerotilaceae → Piscinibacter → Piscinibacter defluvii	3.74 %
Desulfobacca	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfobacca	2.80 %
Unclassified	root	N/A	1.87 %
unclassified Nitrospira	no rank	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira	0.93 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.93 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	29.91 %
Mesorhizobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp.	4.67 %
Piscinibacter defluvii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Sphaerotilaceae → Piscinibacter → Piscinibacter defluvii	3.74 %
Desulfobacca acetoxidans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfobacca → Desulfobacca acetoxidans	2.80 %
Unclassified	root	N/A	1.87 %
Nitrospira sp.	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp.	0.93 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.93 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	29.91 %
Mesorhizobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp.	4.67 %
Piscinibacter defluvii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Sphaerotilaceae → Piscinibacter → Piscinibacter defluvii	3.74 %
Desulfobacca acetoxidans DSM 11109	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfobacca → Desulfobacca acetoxidans → Desulfobacca acetoxidans DSM 11109	2.80 %
Unclassified	root	N/A	1.87 %
Nitrospira sp.	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp.	0.93 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000890\|JGI11643J12802_11900363	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	820	Open in IMG/M
3300001372\|YBBDRAFT_1056150	All Organisms → cellular organisms → Bacteria	1113	Open in IMG/M
3300003987\|Ga0055471_10243640	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	569	Open in IMG/M
3300003994\|Ga0055435_10230428	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	541	Open in IMG/M
3300003999\|Ga0055469_10223220	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	594	Open in IMG/M
3300004779\|Ga0062380_10030841	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1694	Open in IMG/M
3300005185\|Ga0066811_1011098	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	667	Open in IMG/M
3300005276\|Ga0065717_1003862	All Organisms → cellular organisms → Bacteria	1161	Open in IMG/M
3300005334\|Ga0068869_100701969	All Organisms → cellular organisms → Bacteria	863	Open in IMG/M
3300005339\|Ga0070660_100083374	All Organisms → cellular organisms → Bacteria	2511	Open in IMG/M
3300005444\|Ga0070694_101756867	All Organisms → cellular organisms → Bacteria	528	Open in IMG/M
3300005459\|Ga0068867_101874584	Not Available	565	Open in IMG/M
3300005559\|Ga0066700_10511951	All Organisms → cellular organisms → Bacteria	837	Open in IMG/M
3300005577\|Ga0068857_100451458	All Organisms → cellular organisms → Bacteria	1202	Open in IMG/M
3300005615\|Ga0070702_101278809	All Organisms → cellular organisms → Bacteria	595	Open in IMG/M
3300005719\|Ga0068861_101171440	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	742	Open in IMG/M
3300005874\|Ga0075288_1000838	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4035	Open in IMG/M
3300005886\|Ga0075286_1000747	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4277	Open in IMG/M
3300006755\|Ga0079222_10585377	All Organisms → cellular organisms → Bacteria	847	Open in IMG/M
3300006844\|Ga0075428_102065296	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp.	590	Open in IMG/M
3300006847\|Ga0075431_101399762	All Organisms → cellular organisms → Bacteria	659	Open in IMG/M
3300006881\|Ga0068865_101402379	All Organisms → cellular organisms → Bacteria	624	Open in IMG/M
3300006904\|Ga0075424_102610826	All Organisms → cellular organisms → Bacteria	528	Open in IMG/M
3300007004\|Ga0079218_14003746	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	501	Open in IMG/M
3300009053\|Ga0105095_10827380	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfobacca → Desulfobacca acetoxidans → Desulfobacca acetoxidans DSM 11109	519	Open in IMG/M
3300009100\|Ga0075418_11588448	All Organisms → cellular organisms → Bacteria	710	Open in IMG/M
3300009137\|Ga0066709_102719771	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	659	Open in IMG/M
3300009148\|Ga0105243_10222095	All Organisms → cellular organisms → Bacteria	1671	Open in IMG/M
3300009157\|Ga0105092_10118892	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1457	Open in IMG/M
3300010029\|Ga0105074_1005832	All Organisms → cellular organisms → Bacteria	1850	Open in IMG/M
3300010046\|Ga0126384_11355607	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	662	Open in IMG/M
3300010047\|Ga0126382_10584859	All Organisms → cellular organisms → Bacteria	916	Open in IMG/M
3300010360\|Ga0126372_12546874	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300010373\|Ga0134128_10151267	All Organisms → cellular organisms → Bacteria	2623	Open in IMG/M
3300010391\|Ga0136847_10855921	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1060	Open in IMG/M
3300011414\|Ga0137442_1044108	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	883	Open in IMG/M
3300011433\|Ga0137443_1094496	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	855	Open in IMG/M
3300011435\|Ga0137426_1249902	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	530	Open in IMG/M
3300011445\|Ga0137427_10036796	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Sphaerotilaceae → Piscinibacter → Piscinibacter defluvii	1926	Open in IMG/M
3300012034\|Ga0137453_1020241	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1050	Open in IMG/M
3300012205\|Ga0137362_10942161	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	736	Open in IMG/M
3300012355\|Ga0137369_10708032	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	692	Open in IMG/M
3300012484\|Ga0157333_1024533	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	561	Open in IMG/M
3300012497\|Ga0157319_1044515	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300012506\|Ga0157324_1015893	All Organisms → cellular organisms → Bacteria	710	Open in IMG/M
3300012582\|Ga0137358_10092787	All Organisms → cellular organisms → Bacteria	2041	Open in IMG/M
3300012913\|Ga0157298_10277144	All Organisms → cellular organisms → Bacteria	582	Open in IMG/M
3300012922\|Ga0137394_10021745	All Organisms → cellular organisms → Bacteria → Proteobacteria	5149	Open in IMG/M
3300012922\|Ga0137394_10652680	All Organisms → cellular organisms → Bacteria	888	Open in IMG/M
3300012931\|Ga0153915_10653223	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1212	Open in IMG/M
3300012951\|Ga0164300_11138795	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp.	513	Open in IMG/M
3300013096\|Ga0157307_1156217	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	534	Open in IMG/M
3300013296\|Ga0157374_10012063	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	7503	Open in IMG/M
3300014304\|Ga0075340_1036858	All Organisms → cellular organisms → Bacteria	807	Open in IMG/M
3300015373\|Ga0132257_100386371	All Organisms → cellular organisms → Bacteria	1699	Open in IMG/M
3300016319\|Ga0182033_10708243	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	882	Open in IMG/M
3300017997\|Ga0184610_1007763	All Organisms → cellular organisms → Bacteria	2612	Open in IMG/M
3300018052\|Ga0184638_1327974	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp.	515	Open in IMG/M
3300018081\|Ga0184625_10500409	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp.	613	Open in IMG/M
3300018466\|Ga0190268_10203216	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1084	Open in IMG/M
3300019362\|Ga0173479_10566389	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	587	Open in IMG/M
3300021080\|Ga0210382_10410656	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300021332\|Ga0210339_1433552	All Organisms → cellular organisms → Bacteria → Proteobacteria	577	Open in IMG/M
3300021344\|Ga0193719_10290783	All Organisms → cellular organisms → Bacteria	687	Open in IMG/M
3300025537\|Ga0210061_1005822	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1937	Open in IMG/M
3300025559\|Ga0210087_1013641	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1693	Open in IMG/M
3300025900\|Ga0207710_10489023	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	638	Open in IMG/M
3300025904\|Ga0207647_10092792	All Organisms → cellular organisms → Bacteria	1800	Open in IMG/M
3300025925\|Ga0207650_10332466	All Organisms → cellular organisms → Bacteria	1246	Open in IMG/M
3300025932\|Ga0207690_11286082	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	611	Open in IMG/M
3300025938\|Ga0207704_10629740	All Organisms → cellular organisms → Bacteria	881	Open in IMG/M
3300025940\|Ga0207691_10012836	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	8020	Open in IMG/M
3300025959\|Ga0210116_1007078	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1993	Open in IMG/M
3300026014\|Ga0208776_1000753	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2790	Open in IMG/M
3300026023\|Ga0207677_10039567	All Organisms → cellular organisms → Bacteria	3102	Open in IMG/M
3300026088\|Ga0207641_10745348	All Organisms → cellular organisms → Bacteria	967	Open in IMG/M
3300026118\|Ga0207675_101852967	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	622	Open in IMG/M
3300026716\|Ga0208344_102410	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	556	Open in IMG/M
3300027513\|Ga0208685_1018424	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Sphaerotilaceae → Piscinibacter → Piscinibacter defluvii	1596	Open in IMG/M
3300027722\|Ga0209819_10352228	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp.	503	Open in IMG/M
3300027831\|Ga0209797_10459798	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	509	Open in IMG/M
3300027907\|Ga0207428_10039551	All Organisms → cellular organisms → Bacteria	3830	Open in IMG/M
3300028536\|Ga0137415_10326405	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1338	Open in IMG/M
3300031547\|Ga0310887_11051201	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	521	Open in IMG/M
3300031716\|Ga0310813_11488181	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp.	630	Open in IMG/M
3300031820\|Ga0307473_11260758	All Organisms → cellular organisms → Bacteria	552	Open in IMG/M
3300031847\|Ga0310907_10507416	All Organisms → cellular organisms → Bacteria	646	Open in IMG/M
3300031854\|Ga0310904_10165593	All Organisms → cellular organisms → Bacteria	1300	Open in IMG/M
3300031854\|Ga0310904_11130356	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	562	Open in IMG/M
3300031858\|Ga0310892_11217970	All Organisms → cellular organisms → Bacteria	537	Open in IMG/M
3300032013\|Ga0310906_10559040	All Organisms → cellular organisms → Bacteria	783	Open in IMG/M
3300032075\|Ga0310890_10291977	All Organisms → cellular organisms → Bacteria	1168	Open in IMG/M
3300032180\|Ga0307471_101752788	All Organisms → cellular organisms → Bacteria	774	Open in IMG/M
3300033004\|Ga0335084_10846697	Not Available	927	Open in IMG/M
3300033412\|Ga0310810_10129350	All Organisms → cellular organisms → Bacteria → Proteobacteria	2967	Open in IMG/M
3300033412\|Ga0310810_10278926	All Organisms → cellular organisms → Bacteria	1814	Open in IMG/M
3300033419\|Ga0316601_101313252	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	727	Open in IMG/M
3300033475\|Ga0310811_10121057	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3352	Open in IMG/M
3300033480\|Ga0316620_10331876	All Organisms → cellular organisms → Bacteria	1346	Open in IMG/M
3300033814\|Ga0364930_0020666	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2201	Open in IMG/M
3300034115\|Ga0364945_0040525	All Organisms → cellular organisms → Bacteria	1280	Open in IMG/M
3300034115\|Ga0364945_0071732	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfobacca → Desulfobacca acetoxidans → Desulfobacca acetoxidans DSM 11109	990	Open in IMG/M
3300034115\|Ga0364945_0221237	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	580	Open in IMG/M
3300034147\|Ga0364925_0060719	All Organisms → cellular organisms → Bacteria	1298	Open in IMG/M
3300034148\|Ga0364927_0022775	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Sphaerotilaceae → Piscinibacter → Piscinibacter defluvii	1497	Open in IMG/M
3300034148\|Ga0364927_0214308	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfobacca → Desulfobacca acetoxidans → Desulfobacca acetoxidans DSM 11109	570	Open in IMG/M
3300034151\|Ga0364935_0040627	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Sphaerotilaceae → Piscinibacter → Piscinibacter defluvii	1333	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	75.70%
Host-Associated	Host-Associated	24.30%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	52.34%
Plants	Host-Associated → Plants	24.30%
Aquatic	Environmental → Aquatic	23.36%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	44.86%
Rhizoplane	Host-Associated → Plants → Rhizoplane	13.08%
Rhizosphere	Host-Associated → Plants → Rhizosphere	11.21%
Sediment	Environmental → Aquatic → Sediment	8.41%
Freshwater	Environmental → Aquatic → Freshwater	7.48%
Marine	Environmental → Aquatic → Marine	7.48%
Floodplain	Environmental → Terrestrial → Floodplain	7.48%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	34.58%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	11.21%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	8.41%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	7.48%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.48%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.54%
Wetlands	Environmental → Aquatic → Marine → Wetlands	5.61%
Sediment	Environmental → Aquatic → Freshwater → Sediment	3.74%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.74%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.80%
Loam	Environmental → Terrestrial → Soil → Loam	2.80%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	1.87%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.87%
Lake	Environmental → Aquatic → Freshwater → Lake	0.93%
Sand	Environmental → Terrestrial → Soil → Sand	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.56%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	11.21%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	8.41%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	7.48%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.48%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	6.54%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.54%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	5.61%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	3.74%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.74%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.80%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.80%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.80%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.87%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.87%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.87%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.93%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	0.93%
Sediment	Environmental → Aquatic → Marine → Intertidal Zone → Sediment	0.93%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.93%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	10.28%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	7.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	6.54%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	5.61%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	5.61%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.61%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	4.67%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.67%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	2.80%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.80%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.80%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.80%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	2.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.80%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	1.87%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.87%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.87%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.87%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.87%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.87%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	1.87%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.87%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.93%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment	0.93%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.93%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	0.93%
Marine Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Sediment → Marine Estuarine	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.93%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.93%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.93%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.93%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.93%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300001372	YB-Back-sed	Environmental	Open in IMG/M
3300003987	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D2	Environmental	Open in IMG/M
3300003994	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqA_D2	Environmental	Open in IMG/M
3300003999	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleA_D2	Environmental	Open in IMG/M
3300004779	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare3Fresh	Environmental	Open in IMG/M
3300005185	Soil and rhizosphere microbial communities from Laval, Canada - mgHPB	Environmental	Open in IMG/M
3300005276	Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample Mutant cpr5	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005874	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_404	Environmental	Open in IMG/M
3300005886	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_205	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009053	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300010029	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_10_20	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010391	Freshwater sediment microbial communities from Lake Superior, USA - Station SU-17. Combined Assembly of Gp0155404, Gp0155335, Gp0155336, Gp0155336, Gp0155403, Gp0155406	Environmental	Open in IMG/M
3300011414	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT266_2	Environmental	Open in IMG/M
3300011433	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT300_2	Environmental	Open in IMG/M
3300011435	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT660_2	Environmental	Open in IMG/M
3300011445	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT700_2	Environmental	Open in IMG/M
3300012034	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT526_2	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012484	Unplanted soil (control) microbial communities from North Carolina - M.Soil.2.old.190510	Environmental	Open in IMG/M
3300012497	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.2.old.240510	Host-Associated	Open in IMG/M
3300012506	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.6.old.040610	Host-Associated	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012913	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300013096	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300014304	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_ThreeSqA_D1	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018052	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021332	Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Oregon, United States ? S.384 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300025537	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D1 (SPAdes)	Environmental	Open in IMG/M
3300025559	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D2 (SPAdes)	Environmental	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025959	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqB_D2 (SPAdes)	Environmental	Open in IMG/M
3300026014	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_205 (SPAdes)	Environmental	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026716	Grasslands soil microbial communities from Kansas, USA, that are Nitrogen fertilized - NN592 (SPAdes)	Environmental	Open in IMG/M
3300027513	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890 (SPAdes)	Environmental	Open in IMG/M
3300027722	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027831	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare3Fresh (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300033419	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_noCT	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M
3300033480	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D5_B	Environmental	Open in IMG/M
3300033814	Sediment microbial communities from East River floodplain, Colorado, United States - 55_j17	Environmental	Open in IMG/M
3300034115	Sediment microbial communities from East River floodplain, Colorado, United States - 29_s17	Environmental	Open in IMG/M
3300034147	Sediment microbial communities from East River floodplain, Colorado, United States - 44_j17	Environmental	Open in IMG/M
3300034148	Sediment microbial communities from East River floodplain, Colorado, United States - 18_j17	Environmental	Open in IMG/M
3300034151	Sediment microbial communities from East River floodplain, Colorado, United States - 2_s17	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.39
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.39
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F092939

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI11643J12802_119003631	3300000890	Soil	QYLHVNSEASLYPPEAAVKNLIRMSGYMDKKLASTDVNKVLDLSLLDEIGTKRHQRAQK*
YBBDRAFT_10561503	3300001372	Marine Estuarine	YPPDDAVKNLIRMSAYMDKKLGAINANQFIDLSILDELGTKRNERSPQR*
Ga0055471_102436401	3300003987	Natural And Restored Wetlands	VNNLIRMSRYMDKKLGSITANRVVDFTILDELGTKRNQRKQK*
Ga0055435_102304282	3300003994	Natural And Restored Wetlands	PDDAVKNLIRMSAYMDKKLGAINANRFMDLSILDELGTKRNRRAP*
Ga0055469_102232202	3300003999	Natural And Restored Wetlands	PPDQAVANLVRMSAYMDKKLGAIGAASVIDLSLLDELGTRRNQRR*
Ga0062380_100308411	3300004779	Wetland Sediment	LHANSEATLYPPEEAVKNLIRMSGYMDKKLASISVNRIMDLSLLDELGTKRYQRAPR*
Ga0066811_10110981	3300005185	Soil	SEAALYPPEEAVKNLIRMSAYMDKKLGSISANRVVDLSILDELGTKRNQRGQR*
Ga0065717_10038623	3300005276	Arabidopsis Rhizosphere	AYDYLHANSEATLYPPAEAVENLIKMSGYMDKKLQSINAKQVVDLSLLDELGTKQNERVHR*
Ga0068869_1007019693	3300005334	Miscanthus Rhizosphere	LKAIGALHANSETTLYPPAEAVENLIKMSGYMDKKLQLISAKQVVDLSVLDELGTKQNERAHR*
Ga0070660_1000833744	3300005339	Corn Rhizosphere	LHANSETTLYPPAEAVENLIKMSGYMDKKLQLISAKQVVDLSVLDELGTKQNERAHR*
Ga0070694_1017568672	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	NSEATLYPPDDAVKNLIRMSAYMDKKLGTISANRVVDLSILDELGTKRNQRWQK*
Ga0068867_1018745842	3300005459	Miscanthus Rhizosphere	SEATLYPPEDAVKNLIRMSAYMDKKLAAISANRVIDLSVLDELGTKRNQRGQR*
Ga0066700_105119511	3300005559	Soil	NLIRMSAYMDKKLGSISANRVVDLSILDELGTKRNQRAQR*
Ga0068857_1004514583	3300005577	Corn Rhizosphere	AYDYLHANSEATLYPPAEAVENLIKMSGYMEKKLQSIDAKQVVDLSLLDELGTKQNERVHR*
Ga0070702_1012788092	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	YAYLHANSETTLYPPAEAVENLIKMSGYMEKKLQSISAKQVVDLSILDELGTKQNERVHR
Ga0068861_1011714402	3300005719	Switchgrass Rhizosphere	LKAIGALHANSETTLYPPAEAVENLIKMSGYMDKKLQLISAKQVVDLSVLDELGTKQNERVHR*
Ga0075288_10008385	3300005874	Rice Paddy Soil	AVNNLIRMSRYMDKKLGSITANRVVDFTILDELGTKRNQRKQK*
Ga0075286_10007472	3300005886	Rice Paddy Soil	MSRYMDKKLGSITANRVVDFTILDELGTKRNQRKQK*
Ga0079222_105853771	3300006755	Agricultural Soil	TNSEVSLYPPDDAVKNLIRMSTYMDKRLGAISADRVIDLSVLEELGIKRTQRAPK*
Ga0075428_1020652961	3300006844	Populus Rhizosphere	YQYLQSNSDATLYPPDEAVKNLIRMSAYMDKKLGSISANRVLDLSILDELGTKRNQRAQR
Ga0075431_1013997621	3300006847	Populus Rhizosphere	FAYDYLHANVETTLYPPAEAVENLIKMSGYMDKKLQSISAKQVVDLAILDELGTKQNERVHR*
Ga0068865_1014023792	3300006881	Miscanthus Rhizosphere	DDAVKNLIRMSAYMDKKLGTISVNRVVDLSILDELGTKRNQRWQK*
Ga0075424_1026108262	3300006904	Populus Rhizosphere	EDAVKNLIRMSAYMDKRLGAISANRVIDLSILEELGIKRSPRAQR*
Ga0079218_140037462	3300007004	Agricultural Soil	MSIPSRRFTRREDAVKNLIRMSAYMDKKLGAISANRVMDFSILDELGTKRNQRAQK*
Ga0105095_108273802	3300009053	Freshwater Sediment	YPPEDAVKNLIRMSGYMDKKLASISVSRVIDLSLLDELGTKRHQRGQR*
Ga0075418_115884481	3300009100	Populus Rhizosphere	VKLLNTSDHEVIDFAYDYLHANAETTLYPPAEAVENLIKMSGYMDKKLQSISAKQVVDLAILDELGTKQNERVHR*
Ga0066709_1027197711	3300009137	Grasslands Soil	MSAYVDKKLGAISAKRVVDLSILDELGTKRNQRVQK*
Ga0105243_102220951	3300009148	Miscanthus Rhizosphere	LKAIGALHANSETTLYPPAEAVENLIKMSGYMDKKLQSISAKQVVDLSILDELGTKQNERVHR*
Ga0105092_101188921	3300009157	Freshwater Sediment	QYLHANSEASLYPPEVAVKNLIRMSGYMDKKLASINADRVLDLSLLDEIGTKRHQRGQK*
Ga0105074_10058323	3300010029	Groundwater Sand	AVENLIRMSAYVDKKLGSISANRVVDLSILDELGTKRNQRGQK*
Ga0126384_113556071	3300010046	Tropical Forest Soil	QNLIRMSAYMDKRLGSISANRLVDLSFLDELGTKRNQRPQR*
Ga0126382_105848592	3300010047	Tropical Forest Soil	EAIKNLIRMSSYMDRKLGSISADKVVDLSILDELGTKRNQRPQR*
Ga0126372_125468742	3300010360	Tropical Forest Soil	YPPDDATKNLIRMSAYMDKKLGSINVNRVVDLSLLDELGTKRNQRPPR*
Ga0134128_101512671	3300010373	Terrestrial Soil	TNDAEVIDFAYSYLHAISETTLYPPGEAVENLIKMSGYMDKKLQSISAKQVVDLSILDELGTKQNERVHR*
Ga0136847_108559212	3300010391	Freshwater Sediment	AVRNLIRMSAYMDKKLGSISPNRIMDLSILDEIGTKRNQPAQR*
Ga0137442_10441081	3300011414	Soil	MSGYMDKKLASISANRVVDLSILDELGTKRNARNQK*
Ga0137443_10944961	3300011433	Soil	EATLYPPEDAVKNLIRMSAYMDKKLGAISANRVMDFSILDELGTKRNQRAQK*
Ga0137426_12499021	3300011435	Soil	YPPDDAVKNLLRMSSYVDKKLGSISASRVIDLSILDELGTKRYQRVPR*
Ga0137427_100367963	3300011445	Soil	EAVKNLIRMSAYVDKKLASISANKIMDLSILDEIGTKRNQRPQK*
Ga0137453_10202411	3300012034	Soil	AVKNLIRMSAYMDKKLGTISATRVMDLSILDELGTKRNQRAQK*
Ga0137362_109421611	3300012205	Vadose Zone Soil	YQYLHANAEATLYPPDDAVKNLIRMSAYVDRKLGAISANRVVDLSILDELGTKRNQRVPK
Ga0137369_107080322	3300012355	Vadose Zone Soil	SEATLYPPDEAVKYLICMSSYMDKKLGSISANRVVELSILDELGTKRNQRVQR*
Ga0157333_10245331	3300012484	Soil	QLLNTSDSDVIDFAYDYLHANSEATLYPPAEAVENLIKMSGYMEKKLQSIDAKQVVDLSLLDELGTKQNERVHR*
Ga0157319_10445151	3300012497	Arabidopsis Rhizosphere	NSEATLYPPDDAVKNLIRMSAYMDKKLGTISVNRVVDLSILDELGTKRNQRGQK*
Ga0157324_10158931	3300012506	Arabidopsis Rhizosphere	LTQLLNTSDNDVIDFAYDYLHANSEATLYPPAEAVENLIKMSGYMDKKLQSINAKQVVDLSLLDELGTKQNERAHR*
Ga0137358_100927871	3300012582	Vadose Zone Soil	DAVKNLIRMSAYMDKKLGTISANRVVGLSILDELGTKRNQRWQK*
Ga0157298_102771441	3300012913	Soil	LHANSETTLYPPAEAVENLIKMSGYMDKKLQSISAKQVVDLSVLDELGTKQNERAHR*
Ga0137394_100217451	3300012922	Vadose Zone Soil	LYPPDDAVKNLIRMYAYMDKKLGTISANRVVDLSILDELGTKRNQRWQK*
Ga0137394_106526802	3300012922	Vadose Zone Soil	YQYLHANSEATLYPPDEAVKNLIRMSVYMDKKLGTISANRVVDLSILDELGTKRNQRLQR
Ga0153915_106532231	3300012931	Freshwater Wetlands	LYPPEEAVRNLIRMSAYMDKKLGSIGPNRIMDFSILDELGTKRNQPAQR*
Ga0164300_111387951	3300012951	Soil	AVNNLIRMSAYMDKKLGSISPGRVVDLSILDELGTKRNQRAQK*
Ga0157307_11562171	3300013096	Soil	LKAIGALHANSETTLYPPAEAVENLIKMSGYMDKKLQSISAKQVVDLSLLDELGTKQNERAHR*
Ga0157374_100120636	3300013296	Miscanthus Rhizosphere	VIDFAYAYLHANSETTLYPPAEAVENLIKMSGYMDKKLQLISAKQVVDLSVLDELGTKQNERAHR*
Ga0075340_10368581	3300014304	Natural And Restored Wetlands	NLLRMSAYVDKRLGAISAGRVVDLSLLDELGTKRYQRAPR*
Ga0132257_1003863711	3300015373	Arabidopsis Rhizosphere	NSEATLYPPAEAVENLIKMSAYMDKKLQSINAKQVVDLSLLDELGTKQNERVHR*
Ga0182033_107082432	3300016319	Soil	YPPDEAVKNLIRMSAYMDKKLGSVSANRVVDLSILDEIGTQRNQRTLR
Ga0184610_10077634	3300017997	Groundwater Sediment	SAYMDKKLGSISVSRVVDLSILDELGTKRNQRVQK
Ga0184638_13279741	3300018052	Groundwater Sediment	AVKNLIRMAAYMDKKLGSIGANRVVDLSILDELGTKRNQRAQK
Ga0184625_105004091	3300018081	Groundwater Sediment	NSDATLYPPDEAVNNLIRMSAYMDKKLGSISANRVVDLSILDELGTKHNQRAQK
Ga0190268_102032161	3300018466	Soil	KNLIRMAGYMDKKLASISVNRIMDLSLLDELGTKRHQRGQR
Ga0173479_105663892	3300019362	Soil	ANSETTLYPPEDAVKNLIRMSAYMDKKLGAISANRVMDFSILDELGTKRNQRSQK
Ga0210382_104106561	3300021080	Groundwater Sediment	LIRMSAYMDKKLASINPNRVVDLSILDELGTKRNQRVQK
Ga0210339_14335522	3300021332	Estuarine	LYPPEDAVKNLIRMSGYMDKKLASISVSRIMDLSLLDELGTKRHQRMQK
Ga0193719_102907831	3300021344	Soil	HSNSDATLYPPDEAVNNLIRMSAYMDKKLGSISANRVVDLSILDELGTKHNQRAQK
Ga0210061_10058223	3300025537	Natural And Restored Wetlands	YPPDEAVNNLIRMSGYMDKKLGSINANRVVDFTILDELGTKRNQRKQK
Ga0210087_10136412	3300025559	Natural And Restored Wetlands	VNNLIRMSRYMDKKLGSITANRVVDFTILDELGTKRNQRKQK
Ga0207710_104890231	3300025900	Switchgrass Rhizosphere	FAYDYLHANSEATLYPPAEAVENLIKMSGYMDKKLQSINAKQVVDLSLLDELGTKQNERVHR
Ga0207647_100927923	3300025904	Corn Rhizosphere	YAYLHANSETTLYPPAEAVENLIKMSGYMDKKLQLISAKQVVDLSVLDELGTKQNERAHR
Ga0207650_103324661	3300025925	Switchgrass Rhizosphere	LYPPAEAVENLIKMSAYMDKKLQSINAKQVVDLSLLDELGTKQNERVHR
Ga0207690_112860822	3300025932	Corn Rhizosphere	LKAIGALHANSETTLYPPAEAVENLIKMSGYMDKKLQLISAKQVVDLSVLDELGTKQNERAHR
Ga0207704_106297402	3300025938	Miscanthus Rhizosphere	PPDDAVKNLIRMSAYMDKKLGTISANRVVDLSILDELGTKRNQRWQK
Ga0207691_100128369	3300025940	Miscanthus Rhizosphere	LHANSEATLYPPAEAVENLIKMSGYMDKKLQSINAKQVVDLSLLDELGTKQNELVHR
Ga0210116_10070783	3300025959	Natural And Restored Wetlands	LRMSAYVDKRLGSISAGRVVDLSLLDELGTKRYQRAPR
Ga0208776_10007531	3300026014	Rice Paddy Soil	MSRYMDKKLGSITANRVVDFTILDELGTKRNQRKQK
Ga0207677_100395675	3300026023	Miscanthus Rhizosphere	TTLYPPAEAVENLIKMSGYMDKKLQSISAKQVVDLSILDELGTKQNERVHR
Ga0207641_107453481	3300026088	Switchgrass Rhizosphere	YAYLHANSETTLYPPAEAVENLIKMSGYMEKKLQSISAKQVVDLSILDELGTKQNERAHR
Ga0207675_1018529672	3300026118	Switchgrass Rhizosphere	LKAIGALHANSETTLYPPAEAVENLIKMSGYMDKKLQSISAKQVVDLSILDELGTKQNERVHR
Ga0208344_1024102	3300026716	Soil	VIDFAYDYLHANAETTLYPPAEAVENLIKMSGYMDKKLQSISAKQVVDLAILDELGTKQNERVHR
Ga0208685_10184241	3300027513	Soil	PPDEAVKNLIRMSAYVDKKLASISANKIMDLSILDEIGTKRNQRAQK
Ga0209819_103522282	3300027722	Freshwater Sediment	YPPDEAVGNLIKMSAYVDKKLGSISANKIVDLSILDELGTKRNQREQK
Ga0209797_104597982	3300027831	Wetland Sediment	YLHANSEATLYPPEEAVKNLIRMSGYMDKKLASISVNRIMDLSLLDELGTKRYQRAPR
Ga0207428_100395515	3300027907	Populus Rhizosphere	YQYLHANSEATLYPPDDAVKNLIRMSAYMDKKLGTISANRVVDLSILDELGTKRNQRGQK
Ga0137415_103264051	3300028536	Vadose Zone Soil	NAEATLYPPDDAVKNLIRMSAYVDKKLGAISANRVVDLSILDELGTKRNQRMPK
Ga0310887_110512011	3300031547	Soil	ANSEATLYPPAEAVENLIKMSGYMDKKLQSINAKQVVDLSLLDELGTKQNERVHR
Ga0310813_114881811	3300031716	Soil	YLHANSETTLYPPEEAVKNLIRMSGYMDKKLASISANRVVDLSILDELGTKRNARNQK
Ga0307473_112607582	3300031820	Hardwood Forest Soil	LIRMSAYMDKKLGTISANRVVDLSILDELGTKRNQRWQK
Ga0310907_105074161	3300031847	Soil	PDDAVKNLIRMSAYMDKKLGTISVNRVVDLSILDELGTKRNQRGQK
Ga0310904_101655931	3300031854	Soil	LHSNSDASLYPPDEAVNNLIRMSAYMDKKLASISPSRVVDLSILDELGTKRNQRAQK
Ga0310904_111303561	3300031854	Soil	TLYPPEDAVKNLIRMSAYMDKKLGALSTTRVMDFSILDELGTKRSQRAQK
Ga0310892_112179701	3300031858	Soil	DDAVKNLIRMSAYMDKKLGTISANRVVDLSILDELGTKRNQRGQK
Ga0310906_105590402	3300032013	Soil	PPDDAVKNLIRMSAYMDKKLGTIRANRVVDLSILDELGTKRNQRGQK
Ga0310890_102919771	3300032075	Soil	NTSDSDVIDFAYDYLHANSEATLYPPAEAVENLIKMSGYMDKKLQSINAKQVVDLSLLDELGTKQNERVHR
Ga0307471_1017527882	3300032180	Hardwood Forest Soil	NSEATLYPPDDAVKNLIRMSAYMDKKLGTISANRVVDLSILDELGTKRNQRWQK
Ga0335084_108466972	3300033004	Soil	NLIRMSAYMDKKLGAISANRVVDLSILDELGTKRNQRVQK
Ga0310810_101293503	3300033412	Soil	VIDFAYDYLHANSEATLYPPAEAVENLIKMSGYMEKKLQSIDAKQVVDLSLLDELGTKQNERVHR
Ga0310810_102789261	3300033412	Soil	AYAYLHANSETTLYPPAEAVENLIKMSGYMDKKLQLISAKQVVDLSVLDELGTKQNERAH
Ga0316601_1013132522	3300033419	Soil	PDDAVKNLLRMSAYVDKRLGSISAGRVVDLSLLDELGTKRYQRMPR
Ga0310811_101210575	3300033475	Soil	EVIDFAYDYLHANSEATLYPPAEAVENLIKMSGYMEKKLQSINAKQVVDLSLLDELGTKQNERVHR
Ga0316620_103318764	3300033480	Soil	LYPPDQAVANLIRMSAYMDKKLGSIRAGQVIDLSLLDEIGTKQNQKR
Ga0364930_0020666_3_176	3300033814	Sediment	LHSNSEATLYPPDDAIRNLIRMSAYVDKKFGSISPNRIVDLSVLDELGTKRNQPAQR
Ga0364945_0040525_1121_1279	3300034115	Sediment	EATLYPPDDAVKNLIRMSAYMDKKLGTISANRVVDLSILDELGTKRNQRWQK
Ga0364945_0071732_3_131	3300034115	Sediment	VRNLIRMSGYMDKKLASISVSRVMDLSLLDELGTKRHQRGQR
Ga0364945_0221237_416_580	3300034115	Sediment	NSEATLYPPEEAVKNLIRMSAYMDKKLGSISANRVVDLSILDELGTKRNQRAQR
Ga0364925_0060719_1_129	3300034147	Sediment	VKNLIRMSAYMDKKLGSISANRVVDLSILDELGTKRNQRAQR
Ga0364927_0022775_1320_1496	3300034148	Sediment	YLHSNSEATLYPPDEAVKNLIRMSAYVDKKLASISANKIMDLSILDEIGTKRNQRAQK
Ga0364927_0214308_400_570	3300034148	Sediment	HANSEASLYPPEDAVRNLIRMSGYMDKKLASISVSRVMDLSLLDELGTKRHQRGQR
Ga0364935_0040627_1_138	3300034151	Sediment	DEAVKNLIRMSAYVDKKLASISANKIMDLSILDEIGTKRNQRPQK

Hidden Markov Model


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