Metagenome Family F092926

Overview

Basic Information

• Family ID: F092926
• Family Type: Metagenome
• Number of Sequences: 107
• Average Sequence Length: 41 residues
• Representative Sequence: MTPAITLEELLAWNQESSDFWKAHLDANPALLELPCGIGGNA
• Number of Associated Samples: 96
• Number of Associated Scaffolds: 107

Quality Assessment

• Transcriptomic Evidence: No
• Most common taxonomic group: Bacteria
• % of genes with valid RBS motifs: 98.10 %
• % of genes near scaffold ends (potentially truncated): 97.20 %
• % of genes from short scaffolds (< 2000 bps): 84.11 %
• Associated GOLD sequencing projects: 93
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.56

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Bacteria (67.290 % of family members)
• NCBI Taxonomy ID: 2
• Taxonomy: All Organisms → cellular organisms → Bacteria

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog (30.841 % of family members)
• Environment Ontology (ENVO): Unclassified (42.056 % of family members)
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Soil (non-saline) (36.449 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 35.71%
  β-sheet: 0.00%
  Coil/Unstructured: 64.29%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF02843	GARS_C	73.83
PF02844	GARS_N	11.21
PF01715	IPPT	4.67
PF07992	Pyr_redox_2	3.74
PF01745	IPT	0.93
PF13701	DDE_Tnp_1_4	0.93
PF05163	DinB	0.93
PF12706	Lactamase_B_2	0.93
PF04295	GD_AH_C	0.93
PF13476	AAA_23	0.93

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG0151	Phosphoribosylamine-glycine ligase	Nucleotide transport and metabolism [F]	85.05
COG0324	tRNA A37 N6-isopentenylltransferase MiaA	Translation, ribosomal structure and biogenesis [J]	4.67
COG2318	Bacillithiol/mycothiol S-transferase BstA/DinB, DinB/YfiT family (unrelated to E. coli DinB)	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.93
COG2721	Altronate dehydratase	Carbohydrate transport and metabolism [G]	0.93

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	67.29 %
Unclassified	root	N/A	32.71 %

Level 2

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	67.29 %
Unclassified	root	N/A	32.71 %

Level 3

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	67.29 %
Unclassified	root	N/A	32.71 %

Level 4

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.71 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	16.82 %

Level 5

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.71 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	14.95 %

Level 6

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.71 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	14.95 %

Level 7

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.71 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	14.95 %

Level 8

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.71 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	3.74 %

Level 9

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.71 %
Acidobacteriaceae bacterium URHE0068	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	3.74 %

Associated Scaffolds

Scaffold	Taxonomy	Length
3300001401|JGI20189J14885_1007995	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1788
3300005345|Ga0070692_10156733	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1301
3300005614|Ga0068856_100038918	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	4669
3300005921|Ga0070766_11018870	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	570
3300009628|Ga0116125_1035160	All Organisms → cellular organisms → Bacteria	1256
3300009635|Ga0116117_1093190	All Organisms → cellular organisms → Bacteria	752
3300009638|Ga0116113_1104567	All Organisms → cellular organisms → Bacteria	685
3300009645|Ga0116106_1077257	All Organisms → cellular organisms → Bacteria	1088
3300009759|Ga0116101_1129631	Not Available	605
3300010343|Ga0074044_10678775	All Organisms → cellular organisms → Bacteria	672
3300010399|Ga0134127_10045846	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3592
3300013104|Ga0157370_11826192	All Organisms → cellular organisms → Bacteria	545
3300014153|Ga0181527_1220227	All Organisms → cellular organisms → Bacteria	781
3300014153|Ga0181527_1383001	Not Available	540
3300014167|Ga0181528_10822244	Not Available	523
3300014168|Ga0181534_10407834	All Organisms → cellular organisms → Bacteria	753
3300014168|Ga0181534_10745271	Not Available	575
3300014199|Ga0181535_10504548	All Organisms → cellular organisms → Bacteria	700
3300014200|Ga0181526_10414895	All Organisms → cellular organisms → Bacteria	854
3300014495|Ga0182015_10628551	All Organisms → cellular organisms → Bacteria	680
3300014655|Ga0181516_10472923	Not Available	642
3300014657|Ga0181522_10746052	All Organisms → cellular organisms → Bacteria	599
3300017988|Ga0181520_10554965	All Organisms → cellular organisms → Bacteria	804
3300018022|Ga0187864_10273066	All Organisms → cellular organisms → Bacteria	766
3300018023|Ga0187889_10301447	All Organisms → cellular organisms → Bacteria	709
3300018033|Ga0187867_10707199	Not Available	549
3300018035|Ga0187875_10539848	Not Available	617
3300018035|Ga0187875_10544355	Not Available	614
3300018038|Ga0187855_10847698	All Organisms → cellular organisms → Bacteria	533
3300018044|Ga0187890_10489801	All Organisms → cellular organisms → Bacteria	691
3300018046|Ga0187851_10560145	Not Available	647
3300018047|Ga0187859_10658968	Not Available	593
3300018057|Ga0187858_10418809	All Organisms → cellular organisms → Bacteria	829
3300019082|Ga0187852_1411840	All Organisms → cellular organisms → Bacteria	526
3300021170|Ga0210400_10910018	All Organisms → cellular organisms → Bacteria	718
3300021404|Ga0210389_10958573	All Organisms → cellular organisms → Bacteria	664
3300022863|Ga0224532_1040659	All Organisms → cellular organisms → Bacteria	614
3300023088|Ga0224555_1031061	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2259
3300023091|Ga0224559_1052133	Not Available	1614
3300024295|Ga0224556_1052368	All Organisms → cellular organisms → Bacteria	1008
3300025612|Ga0208691_1060114	All Organisms → cellular organisms → Bacteria	859
3300026142|Ga0207698_10835107	All Organisms → cellular organisms → Bacteria	925
3300028068|Ga0255355_1012256	Not Available	1999
3300028087|Ga0255354_1041417	All Organisms → cellular organisms → Bacteria	1036
3300028566|Ga0302147_10087042	Not Available	1077
3300028572|Ga0302152_10260162	All Organisms → cellular organisms → Bacteria	567
3300028762|Ga0302202_10052817	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2616
3300028765|Ga0302198_10032329	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3464
3300028788|Ga0302189_10025347	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3299
3300028813|Ga0302157_10193115	Not Available	1173
3300028866|Ga0302278_10451574	Not Available	557
3300028873|Ga0302197_10129506	Not Available	1237
3300028873|Ga0302197_10482708	Not Available	542
3300028882|Ga0302154_10314636	All Organisms → cellular organisms → Bacteria	767
3300029882|Ga0311368_10309730	Not Available	1193
3300029883|Ga0311327_10324949	All Organisms → cellular organisms → Bacteria	991
3300029883|Ga0311327_10814612	Not Available	544
3300029908|Ga0311341_10655053	All Organisms → cellular organisms → Bacteria	588
3300029908|Ga0311341_10675189	Not Available	577
3300029913|Ga0311362_10271963	Not Available	1809
3300029914|Ga0311359_10901944	All Organisms → cellular organisms → Bacteria	607
3300029916|Ga0302148_1166767	All Organisms → cellular organisms → Bacteria	622
3300029917|Ga0311326_10080669	Not Available	1828
3300029922|Ga0311363_10092702	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	4214
3300029922|Ga0311363_10253049	All Organisms → cellular organisms → Bacteria → Acidobacteria	2044
3300029945|Ga0311330_11068197	All Organisms → cellular organisms → Bacteria	592
3300029954|Ga0311331_11476451	Not Available	556
3300029985|Ga0302280_1276790	All Organisms → cellular organisms → Bacteria	563
3300029990|Ga0311336_11138184	Not Available	680
3300030007|Ga0311338_11320839	Not Available	676
3300030041|Ga0302274_10392713	Not Available	621
3300030045|Ga0302282_1206054	All Organisms → cellular organisms → Bacteria	742
3300030049|Ga0302191_10124195	All Organisms → cellular organisms → Bacteria	1015
3300030051|Ga0302195_10374374	Not Available	620
3300030399|Ga0311353_11503134	Not Available	546
3300030506|Ga0302194_10010190	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5479
3300030506|Ga0302194_10202266	All Organisms → cellular organisms → Bacteria	816
3300030507|Ga0302192_10014638	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	4606
3300030507|Ga0302192_10199164	All Organisms → cellular organisms → Bacteria	866
3300030519|Ga0302193_10023992	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4291
3300030617|Ga0311356_12027937	All Organisms → cellular organisms → Bacteria	508
3300030688|Ga0311345_10600787	All Organisms → cellular organisms → Bacteria	913
3300030739|Ga0302311_10282493	Not Available	1213
3300031236|Ga0302324_102393194	All Organisms → cellular organisms → Bacteria	648
3300031241|Ga0265325_10269529	All Organisms → cellular organisms → Bacteria	766
3300031242|Ga0265329_10087023	All Organisms → cellular organisms → Bacteria	991
3300031247|Ga0265340_10019293	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3511
3300031258|Ga0302318_10368615	All Organisms → cellular organisms → Bacteria	722
3300031259|Ga0302187_10294740	All Organisms → cellular organisms → Bacteria	799
3300031708|Ga0310686_108936159	All Organisms → cellular organisms → Bacteria	844
3300031708|Ga0310686_110870034	Not Available	1662
3300031712|Ga0265342_10326230	All Organisms → cellular organisms → Bacteria	804
3300031788|Ga0302319_10017834	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	12976
3300031902|Ga0302322_100164917	All Organisms → cellular organisms → Bacteria → Acidobacteria	2388
3300031902|Ga0302322_101608090	All Organisms → cellular organisms → Bacteria	794
3300031918|Ga0311367_11292583	All Organisms → cellular organisms → Bacteria	721
3300032515|Ga0348332_14282275	All Organisms → cellular organisms → Bacteria	896
3300032677|Ga0316227_1253289	All Organisms → cellular organisms → Bacteria	596
3300033158|Ga0335077_11342482	Not Available	692
3300033402|Ga0326728_10890735	Not Available	632
3300033405|Ga0326727_10071702	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	4983
3300033561|Ga0371490_1053167	Not Available	1192
3300033818|Ga0334804_080786	All Organisms → cellular organisms → Bacteria	871
3300034091|Ga0326724_0285308	All Organisms → cellular organisms → Bacteria	926
3300034282|Ga0370492_0448942	All Organisms → cellular organisms → Bacteria	523

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.46%
Host-Associated	Host-Associated	6.54%

Class

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	66.36%
Aquatic	Environmental → Aquatic	27.10%
Plants	Host-Associated → Plants	6.54%

Category

Habitat	Taxonomy	Distribution
Peat	Environmental → Terrestrial → Peat	54.21%
Freshwater	Environmental → Aquatic → Freshwater	27.10%
Soil	Environmental → Terrestrial → Soil	11.21%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.67%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.87%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.93%

Type

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified	54.21%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	26.17%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	5.61%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.74%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.74%
Loam	Environmental → Terrestrial → Soil → Loam	1.87%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.87%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.93%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.93%

Subtype

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	54.21%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	20.56%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	5.61%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.74%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	2.80%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.80%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.87%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.87%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	0.93%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.93%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.93%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.93%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.93%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.93%

Habitat

Habitat	Taxonomy	Distribution
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	30.84%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	11.21%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	9.35%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	7.48%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	6.54%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	5.61%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	5.61%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	3.74%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	3.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.87%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.87%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater	0.93%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.93%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.93%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.93%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.93%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.93%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.93%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.93%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.93%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.93%

Associated Samples

Taxon OID	Sample Name	Habitat Type
3300001401	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-3 deep-072012	Environmental
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental
3300009628	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_10	Environmental
3300009635	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_10	Environmental
3300009638	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_10	Environmental
3300009645	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40	Environmental
3300009759	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_10	Environmental
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated
3300014153	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_60_metaG	Environmental
3300014167	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaG	Environmental
3300014168	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG	Environmental
3300014199	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaG	Environmental
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental
3300014655	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_10_metaG	Environmental
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental
3300017988	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaG	Environmental
3300018022	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_40	Environmental
3300018023	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_100	Environmental
3300018033	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10	Environmental
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental
3300018044	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10	Environmental
3300018046	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10	Environmental
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental
3300019082	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_40	Environmental
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental
3300022863	Peat soil microbial communities from Stordalen Mire, Sweden - 717 E1 1-5	Environmental
3300023088	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S2 30-34	Environmental
3300023091	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 30-34	Environmental
3300024295	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 1-5	Environmental
3300025612	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10 (SPAdes)	Environmental
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated
3300028068	Peat soil microbial communities from Stordalen Mire, Sweden - H.B.S.T75	Environmental
3300028087	Peat soil microbial communities from Stordalen Mire, Sweden - H.B.S.T50	Environmental
3300028566	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E3_2	Environmental
3300028572	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N2_1	Environmental
3300028762	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N3_3	Environmental
3300028765	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N2_2	Environmental
3300028783	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N3_3	Environmental
3300028788	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E2_2	Environmental
3300028813	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_3	Environmental
3300028866	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N3_2	Environmental
3300028873	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N2_1	Environmental
3300028882	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N2_3	Environmental
3300029882	III_Palsa_E1 coassembly	Environmental
3300029883	I_Bog_E2 coassembly	Environmental
3300029908	II_Bog_E1 coassembly	Environmental
3300029913	III_Bog_N3 coassembly	Environmental
3300029914	III_Bog_E2 coassembly	Environmental
3300029916	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E3_1	Environmental
3300029917	I_Bog_E1 coassembly	Environmental
3300029922	III_Fen_E1 coassembly	Environmental
3300029945	I_Bog_N2 coassembly	Environmental
3300029954	I_Bog_N3 coassembly	Environmental
3300029985	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_E1_1	Environmental
3300029990	I_Fen_N2 coassembly	Environmental
3300030007	I_Palsa_E1 coassembly	Environmental
3300030041	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N2_1	Environmental
3300030045	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_E1_3	Environmental
3300030049	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E3_1	Environmental
3300030051	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N1_2	Environmental
3300030399	II_Palsa_E2 coassembly	Environmental
3300030506	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N1_1	Environmental
3300030507	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E3_2	Environmental
3300030519	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E3_3	Environmental
3300030617	II_Palsa_N2 coassembly	Environmental
3300030688	II_Bog_N2 coassembly	Environmental
3300030739	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_3	Environmental
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental
3300031241	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG	Host-Associated
3300031242	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG	Host-Associated
3300031247	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG	Host-Associated
3300031258	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_1	Environmental
3300031259	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E1_3	Environmental
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental
3300031712	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG	Host-Associated
3300031788	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_2	Environmental
3300031902	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2	Environmental
3300031918	III_Fen_N3 coassembly	Environmental
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental
3300032677	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18019	Environmental
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental
3300033561	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB28FN SIP fraction	Environmental
3300033818	Peat soil microbial communities from Stordalen Mire, Sweden - 713 S-3-M	Environmental
3300034091	Peat soil microbial communities from McLean, Ithaca, NY, United States - MB00N	Environmental
3300034282	Peat soil microbial communities from wetlands in Alaska, United States - Eight_mile_03D_16	Environmental

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI20189J14885_10079953	3300001401	Arctic Peat Soil	MSVGITFEEMLAWSNQASDYWKAHLDANPNLLDLPCGIGGAKNVQE
Ga0070692_101567331	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	VDVGISLKELLAWNEEVADFWKAHLDANPHLLELPCDIGGTKNVQE
Ga0068856_1000389186	3300005614	Corn Rhizosphere	VDVGISLKELLAWNEEVADFWKAHLDANPHLLELPCDIGG
Ga0070766_110188702	3300005921	Soil	MRMTQGLSLEELLAWNEEASAFWKAHFEANPELLQLPCDIGGNKTVQE
Ga0116125_10351601	3300009628	Peatland	MTVGTTLEELLAWNRESAHFWNGHFVANPALLELPCGIGGT
Ga0116117_10931902	3300009635	Peatland	MTPVITHQELLVWSQEASRFWKAHLDANPDLLELPCDIGGSANVQ
Ga0116113_11045672	3300009638	Peatland	MTVAISLEELLIWNEESSAFWKGLLEDNPSLLQLPCGI
Ga0116106_10772571	3300009645	Peatland	MSVGISLEELLAWNEQSAAWWKTHLETNPALLELPCDIGGT
Ga0116101_11296311	3300009759	Peatland	MSVGISLEELLAWNEQSAAYWKTHLETNPALLELPCDI
Ga0074044_106787752	3300010343	Bog Forest Soil	MTPAITLEELLTWNQESSDFWKAHLDANPALLELPC
Ga0134127_100458465	3300010399	Terrestrial Soil	VDVGISLKELLAWNEEVADFWKAHLDANPHLLELPCDIGGTKNVQ
Ga0157370_118261921	3300013104	Corn Rhizosphere	MSVGITLAELLAWNDEASSHWKIHLDANGSLLDLPCDIGGAKT
Ga0181527_12202272	3300014153	Bog	MTPAITLEELLAWNQESSNFWKAHLDANPALLELPCD
Ga0181527_13830012	3300014153	Bog	MSVGISLEELLAWNEQSAAYWKTHLETNPTLLELPCD
Ga0181528_108222442	3300014167	Bog	MSVGITLEELVAWNEQSSDYWKAHLETNPALLELPCDIGGTANVQGFVR
Ga0181534_104078342	3300014168	Bog	MSVAISLEELLAWNQEASNWWKAHLDANPTLLELPCGIGGTA
Ga0181534_107452712	3300014168	Bog	MTPAITLEELLKWTEESAAWWKAHLEANPALLDLPCGIGG
Ga0181535_105045481	3300014199	Bog	MSVGITLEELLVWCQDSSAYWKAHLDANPALLELPCDIGGTANVQG
Ga0181526_104148952	3300014200	Bog	VTVGISLEELLAWNEQSAAYWKTHLEMNPALLELPCDIGGTAT
Ga0182015_106285512	3300014495	Palsa	MTPAISFEELLVWNQESADFWKAHFEANPALLELPCGIGGTAT
Ga0181516_104729231	3300014655	Bog	MSAGITLEELLAWNDEVARYWKAHLDANPNLLALPCDIGPATNVQE
Ga0181522_107460521	3300014657	Bog	MTPAITIEELQAWNQETAKFWKEHLEANPALLELPCGVGGAAN
Ga0181520_105549651	3300017988	Bog	MSVGITLEELLAWNEQASDYWKTHLETNPALLDLPCDIGGTANAQG
Ga0187864_102730662	3300018022	Peatland	MTPAITLDELLAWNHESAAFWKAHLEANPALLELPCGISGTAN
Ga0187889_103014472	3300018023	Peatland	MSLAISLEELLAWNQESSNFWKAHLEANPALLELPCDIGGTANVLEFAG
Ga0187867_107071992	3300018033	Peatland	MTPAITLDELLAWNHESAAFWKAHLEANPALLELPCGISG
Ga0187875_105398481	3300018035	Peatland	MMTHGVSLEELLAWNDEASAFWKAHLEANPALLQLPCDIGGTANVQD
Ga0187875_105443552	3300018035	Peatland	MSVGITLEELVAWNEQSSDYWKAHLETNPALLELPCDIGGTAN
Ga0187855_108476981	3300018038	Peatland	VTVGISLEELLAWNEQSAAYWKTHLEMNPALLELPCDI
Ga0187887_107284031	3300018043	Peatland	MSVGVSMKELLIWNNEASEFWKAHLEANPGLLELK
Ga0187890_104898012	3300018044	Peatland	MSVGITLEELLAWNDEAARYWKAHLEANPHLLALPCDIGPATSVQ
Ga0187851_105601452	3300018046	Peatland	MSVGISLEELLAWNEQSAAYWKTHLETNPALLELP
Ga0187859_106589682	3300018047	Peatland	MSVGITLEELLAWNDQSAASWKTHLETNPALLELPC
Ga0187858_104188092	3300018057	Peatland	MSVGISLEELLAWNEQSAAWWKTHLETNPALLELPCDIGGTA
Ga0187852_14118401	3300019082	Peatland	MTPAITMQELLVWSQESSGFWNEHLKANPALLQLPCGIG
Ga0210400_109100181	3300021170	Soil	VTPAITLEELFAWNQETSTFWKGFLEDNLAVLEQPCDIGGVLTVQQFV
Ga0210389_109585731	3300021404	Soil	MTPALTLEELLHWNDEASRWWKAHLGANLGLLELPCDI
Ga0224532_10406591	3300022863	Soil	MTAAITLAELLAWNQEASNFWKAHLEANPALLELP
Ga0224555_10310614	3300023088	Soil	MSAAITLEELLAWNDEAARYWKSHLEANPHLLALPCDIGPAKNVQEFV
Ga0224559_10521331	3300023091	Soil	MTIAISLEELLAWNRESSNFWKLHLDANPALLQLPCGIGGTANV
Ga0224556_10523681	3300024295	Soil	MTHAVSMEELLTWNDEASTFWKAHLDANPALLQLPCGIGG
Ga0208691_10601141	3300025612	Peatland	MTPAITLEELLAWNEEVSRFWKVHLDANPALLELPCGIGGNVDVQ
Ga0207698_108351071	3300026142	Corn Rhizosphere	VDVGISLKELLAWNEEVADFWKAHLDANPHLLELPCDIGGDE
Ga0255355_10122561	3300028068	Soil	MTTAISLEELLAWNRESSNFWKLHLDANPALLQLPCGIGGTANVQ
Ga0255354_10414172	3300028087	Soil	MTAAITLNELLAWNQEASDFWKAHLEANPALLELPCGIGGT
Ga0302147_100870421	3300028566	Bog	MTVGITMEELLAWNNESAGFWKAHLEANPALLELPCGIGGTANV
Ga0302152_102601621	3300028572	Bog	MTPAITLEELLAWNDEASKFWKAHLDANPALLALPCGIGGA
Ga0302202_100528174	3300028762	Bog	MSVGITLEELLAWNDEAARYWKAHLEANPHLLALPCDIGPATSVQE
Ga0302198_100323294	3300028765	Bog	MTSAISMEELLAWSEESAAFWKAHLEANPALLELPCGIGGTANVQ
Ga0302279_102120801	3300028783	Bog	MTPAITLEELLAWDQEASSFWKTWLDANPAVLELPCDIGRAKSVQEF
Ga0302189_100253471	3300028788	Bog	MTIGITLEELLAWNNESAGFWKAHLEANPSLLELPCGIGGTAN
Ga0302157_101931151	3300028813	Bog	MSLAISIEELLAWNDEASAWWKTHLEANQALLELPCGIGGAPTV
Ga0302278_104515741	3300028866	Bog	MTAAVTLAELLAWNQESSNFWKAHLEANPALLALPCGIGGT
Ga0302197_101295062	3300028873	Bog	VTPAITLEELLAWSCQNSAWWKAHFDANPALLELPCDINRGS
Ga0302197_104827081	3300028873	Bog	MTPAITLEELVAWDHESAVFWKTYLEANQALLRLPCGIGGAMDVQEF
Ga0302154_103146361	3300028882	Bog	MTPAITLEELLTWNKEASNFWKTHLDANPALLELPCGIGGAANV
Ga0311368_103097301	3300029882	Palsa	MTPAITLEELLAWNQESSDFWKAHLDANPALLELPCGIGGNA
Ga0311327_103249492	3300029883	Bog	MTPAITLEELLTWNKEASNFWKTHLDANPALLELPCGIG
Ga0311327_108146121	3300029883	Bog	MSVGISLTELLVWNDEASQFWKAHLDANPQVLPLPCDIGSAT
Ga0311341_106550531	3300029908	Bog	MSAAISMQELLVWNQEASNWWKAHLDTNPALLELPCGIGGTANV
Ga0311341_106751891	3300029908	Bog	MTAAITLNELLAWNQEASDFWKAHLEANPALLELPCGIGGTV
Ga0311362_102719631	3300029913	Bog	VSVGITLEELLAWNDEAAIVWKNHLDINPALLDAACDIGG
Ga0311359_109019441	3300029914	Bog	MSTVAGVSLEELLAWSQESASFWKSHLDANPALLELPCS
Ga0302148_11667671	3300029916	Bog	MTPAITLNELLAWNQQSSNFWKAHLEANPALLELPCGIGGAA
Ga0311326_100806691	3300029917	Bog	MSAAITLEELLAWNDEAARYWKSHLEANPHLLALPCDIGPAKNV
Ga0311363_100927021	3300029922	Fen	MTPAITLEELLGWNQQSSVFWKAWLDANPAALALPCDIDRTTNVQE
Ga0311363_102530491	3300029922	Fen	MTPAITLEELLTWNEEASNFWKAHLDANPALLELPCGI
Ga0311330_110681971	3300029945	Bog	MTAAITLEELLAWNEESSAFWKGHLEANPGLLELPCDIGGTKTVQ
Ga0311331_114764512	3300029954	Bog	MSVGITLEELLVWCQDSSAYWKAHLDANPALLELP
Ga0302280_12767901	3300029985	Fen	MTPAITLEELLAWNRESADFWKAHFDANPALLALPCG
Ga0311336_111381841	3300029990	Fen	MSTGITLQELLAWNQEASNFWKAHFDSNPHLLELACGIGG
Ga0311338_113208391	3300030007	Palsa	VNLAITVEEFLAWSDEASTWWKTHLDANPALLELPCG
Ga0302274_103927131	3300030041	Bog	MSVAVTLEELSRWNQETSAFWNQHLDANPTLLELPCDI
Ga0302282_12060541	3300030045	Fen	MTPAITLEELLIWNQESSNFWKAHLDANPALLELPCGIGGAAN
Ga0302191_101241951	3300030049	Bog	MTAAITLNELLAWNQEASDFWKAHLEANPALLELPCGI
Ga0302195_103743742	3300030051	Bog	MTPAITLEELLVWNQETSSFWKTWLDANPAVLELPCDIGRAKSVQEF
Ga0311353_115031341	3300030399	Palsa	MATGITLEELMGWSEEAAEFWKDHLEANPALLELPCGIGGTANV
Ga0302194_100101906	3300030506	Bog	MTIGITLEELLAWNNESAGFWKAHLEANPSLLELPCGIGG
Ga0302194_102022661	3300030506	Bog	MTPAITLEELLAWSDEASNFWKAHLDANPALLEPP
Ga0302192_100146386	3300030507	Bog	MTPAITLNELLAWNQQSSNFWKAHLEANPALLELPCG
Ga0302192_101991641	3300030507	Bog	MSVAISMQELLVWNQEASNWWKAHLDTNPALLELP
Ga0302193_100239921	3300030519	Bog	MTPAITLEELLAWSDEASNFWKVHLDANPALLEPPCGIGES
Ga0311356_120279372	3300030617	Palsa	MTIGITLEELLAWNQESANFWKAHLEANPTLLELPCGIGGTANVQEL
Ga0311345_106007871	3300030688	Bog	MTPAISLDELLAWSQESSRFWKEHFDANPVLLELPCSIDNSGTVLGL
Ga0302311_102824931	3300030739	Palsa	MTHGISLEELLDWNEEVSAFWKAHFETSPALLQLPCGI
Ga0302324_1023931941	3300031236	Palsa	MATGITLEELMGWSEEAAEFWKDHLEANPALLELPCGIGGT
Ga0265325_102695291	3300031241	Rhizosphere	MSAGITLRELLVWNQEASNFWNAHFNANPHLLELECGIGGAATV
Ga0265329_100870232	3300031242	Rhizosphere	MTPAITLEELLAWNHESAAFWKAHLEANLSLLELPCDIGGTASV
Ga0265340_100192931	3300031247	Rhizosphere	MCVGITLQELLAWNRESSRFWKDHLDANPHLLALSCDIGGTTN
Ga0302318_103686151	3300031258	Bog	MTPAITLEELLTWNKEASNFWKTHLDANPALLELPCGI
Ga0302187_102947401	3300031259	Bog	MTPAITLEELLTWNEEASNFWKAHLDANPALLELP
Ga0310686_1089361592	3300031708	Soil	LTPAITLEELLTWNQESADFWKAHLDANPVLLELPCGIGGNVHVQAF
Ga0310686_1108700343	3300031708	Soil	MTPAITHEELLAWNCESADFWKAHLGANPALLQLPCGIGGN
Ga0265342_103262302	3300031712	Rhizosphere	MTPAITFEELLAWNEESSDFWKAHLDANPTLLQMPC
Ga0302319_100178341	3300031788	Bog	MTPAITLDELLAWSCQSSNFWKAHLDANPALLALPCGIGGA
Ga0302322_1001649171	3300031902	Fen	MIPAISLEELLVWNDEASQFWKRHLEANPALLALPCEIGGTA
Ga0302322_1016080901	3300031902	Fen	MTPAITLEELLGWNQEAALFWKEHLEANPALLELPCDIGDTK
Ga0311367_112925832	3300031918	Fen	MIPAISLEELLVWNDEASQFWKRHLEANPALLALPCEIGGTAN
Ga0348332_142822751	3300032515	Plant Litter	VTPAITFEGVFAWSDEASRFWKAHLDANPSLLELPSGIGGTATVQSW
Ga0316227_12532892	3300032677	Freshwater	MTPAITIEELLAWNQESAGFWKSHLEANPALLELPCDI
Ga0335077_113424822	3300033158	Soil	MSVGITLEELLAWNVDSSNYWKAYFDANPASLELPCDIG
Ga0326728_108907351	3300033402	Peat Soil	MSVGNTLDELLAWNEQSANYWKTHFDANPALLGLTCEIGG
Ga0326727_100717025	3300033405	Peat Soil	MSVGITLEELLAWNEQSSDYWKTHLETNPALLELPCDIGGTST
Ga0371490_10531671	3300033561	Peat Soil	MSVGITLEELLAWNEQSAAYWKTHLATNPALLELPCDIGGTA
Ga0334804_080786_2_121	3300033818	Soil	MTPAITLEELLTWNKEASNFWKTHLDANPALLELPCGIGG
Ga0326724_0285308_821_925	3300034091	Peat Soil	MSVGISLEELLAWHEQSAAWWKTHLETNPALLELP
Ga0370492_0448942_403_522	3300034282	Untreated Peat Soil	MTPAITLEELLAWNQETSSFWKTWLDANPAALELPCDIGR