NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F092920

Metagenome Family F092920

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F092920
Family Type Metagenome
Number of Sequences 107
Average Sequence Length 75 residues
Representative Sequence MAEEEKKHGVKDPNEGTNGKLASNMTGEAIESNYDYGNITDSDKKVVREIIDLMRQRDQVPCGMFAEELKTRF
Number of Associated Samples 67
Number of Associated Scaffolds 107

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 81.31 %
% of genes near scaffold ends (potentially truncated) 100.00 %
% of genes from short scaffolds (< 2000 bps) 78.50 %
Associated GOLD sequencing projects 58
AlphaFold2 3D model prediction Yes
3D model pTM-score0.36

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (92.523 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous
(33.645 % of family members)
Environment Ontology (ENVO) Unclassified
(50.467 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(79.439 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 29.70%    β-sheet: 3.96%    Coil/Unstructured: 66.34%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.36
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 107 Family Scaffolds
PF03906Phage_T7_tail 8.41
PF01833TIG 4.67



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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A92.52 %
All OrganismsrootAll Organisms7.48 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000116|DelMOSpr2010_c10035561Not Available2290Open in IMG/M
3300001419|JGI11705J14877_10032661Not Available1955Open in IMG/M
3300001419|JGI11705J14877_10032853Not Available1948Open in IMG/M
3300001748|JGI11772J19994_1007170All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium2034Open in IMG/M
3300001748|JGI11772J19994_1040414Not Available578Open in IMG/M
3300005239|Ga0073579_1643948Not Available743Open in IMG/M
3300005512|Ga0074648_1004888All Organisms → cellular organisms → Bacteria10526Open in IMG/M
3300005512|Ga0074648_1081194Not Available1217Open in IMG/M
3300005611|Ga0074647_1008954Not Available1996Open in IMG/M
3300005611|Ga0074647_1009096Not Available1969Open in IMG/M
3300006025|Ga0075474_10098080Not Available948Open in IMG/M
3300006025|Ga0075474_10142788Not Available754Open in IMG/M
3300006027|Ga0075462_10210055Not Available583Open in IMG/M
3300006802|Ga0070749_10080817Not Available1941Open in IMG/M
3300006810|Ga0070754_10097101Not Available1460Open in IMG/M
3300006867|Ga0075476_10027446Not Available2410Open in IMG/M
3300006867|Ga0075476_10122493Not Available987Open in IMG/M
3300006868|Ga0075481_10225202Not Available665Open in IMG/M
3300006869|Ga0075477_10297897Not Available641Open in IMG/M
3300006874|Ga0075475_10365931Not Available585Open in IMG/M
3300006919|Ga0070746_10037926All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium2560Open in IMG/M
3300006919|Ga0070746_10052239Not Available2129Open in IMG/M
3300006919|Ga0070746_10064441Not Available1882Open in IMG/M
3300006919|Ga0070746_10112832Not Available1348Open in IMG/M
3300007344|Ga0070745_1037639Not Available2042Open in IMG/M
3300007344|Ga0070745_1246958Not Available646Open in IMG/M
3300007345|Ga0070752_1050174Not Available1920Open in IMG/M
3300007345|Ga0070752_1055776Not Available1795Open in IMG/M
3300007345|Ga0070752_1162188Not Available912Open in IMG/M
3300007539|Ga0099849_1150584Not Available900Open in IMG/M
3300007960|Ga0099850_1040668Not Available2005Open in IMG/M
3300007960|Ga0099850_1048496Not Available1816Open in IMG/M
3300009000|Ga0102960_1180790Not Available755Open in IMG/M
3300009000|Ga0102960_1286650Not Available582Open in IMG/M
3300009000|Ga0102960_1312866Not Available554Open in IMG/M
3300009001|Ga0102963_1394413Not Available543Open in IMG/M
3300009001|Ga0102963_1429564Not Available518Open in IMG/M
3300009001|Ga0102963_1448213Not Available506Open in IMG/M
3300009077|Ga0115552_1379332Not Available559Open in IMG/M
3300009437|Ga0115556_1124205Not Available968Open in IMG/M
3300009443|Ga0115557_1134602Not Available1012Open in IMG/M
3300009443|Ga0115557_1157355Not Available915Open in IMG/M
3300010299|Ga0129342_1036085Not Available1977Open in IMG/M
3300010300|Ga0129351_1267011Not Available652Open in IMG/M
3300010368|Ga0129324_10202666Not Available805Open in IMG/M
3300010883|Ga0133547_11118880Not Available1512Open in IMG/M
3300011254|Ga0151675_1014877Not Available586Open in IMG/M
3300012953|Ga0163179_10559305Not Available954Open in IMG/M
3300017697|Ga0180120_10067909Not Available1584Open in IMG/M
3300017710|Ga0181403_1112179Not Available570Open in IMG/M
3300017728|Ga0181419_1033006Not Available1402Open in IMG/M
3300017740|Ga0181418_1018226Not Available1846Open in IMG/M
3300017744|Ga0181397_1121998Not Available676Open in IMG/M
3300017751|Ga0187219_1170936Not Available615Open in IMG/M
3300017765|Ga0181413_1144570Not Available718Open in IMG/M
3300017783|Ga0181379_1012110Not Available3595Open in IMG/M
3300017786|Ga0181424_10063188Not Available1599Open in IMG/M
3300017958|Ga0181582_10931527Not Available508Open in IMG/M
3300018417|Ga0181558_10528422Not Available612Open in IMG/M
3300018421|Ga0181592_10694895Not Available680Open in IMG/M
3300018424|Ga0181591_11002506Not Available567Open in IMG/M
3300018424|Ga0181591_11042372Not Available553Open in IMG/M
3300019459|Ga0181562_10501659Not Available576Open in IMG/M
3300020403|Ga0211532_10081401Not Available1426Open in IMG/M
3300021957|Ga0222717_10117225Not Available1651Open in IMG/M
3300021958|Ga0222718_10077953Not Available2006Open in IMG/M
3300021958|Ga0222718_10078766Not Available1993Open in IMG/M
3300021958|Ga0222718_10081520Not Available1950Open in IMG/M
3300021958|Ga0222718_10149285Not Available1321Open in IMG/M
3300021959|Ga0222716_10069735Not Available2442Open in IMG/M
3300021959|Ga0222716_10230633Not Available1154Open in IMG/M
3300021959|Ga0222716_10710904Not Available532Open in IMG/M
3300021962|Ga0222713_10045676All Organisms → cellular organisms → Bacteria → Proteobacteria3389Open in IMG/M
3300021964|Ga0222719_10047425All Organisms → Viruses → Predicted Viral3286Open in IMG/M
3300021964|Ga0222719_10079169Not Available2437Open in IMG/M
3300021964|Ga0222719_10088038Not Available2288Open in IMG/M
3300021964|Ga0222719_10103840Not Available2073Open in IMG/M
3300021964|Ga0222719_10108673Not Available2016Open in IMG/M
3300021964|Ga0222719_10113442Not Available1963Open in IMG/M
3300021964|Ga0222719_10124836Not Available1847Open in IMG/M
3300021964|Ga0222719_10152408Not Available1628Open in IMG/M
3300021964|Ga0222719_10713242Not Available564Open in IMG/M
3300022063|Ga0212029_1065298Not Available533Open in IMG/M
3300022187|Ga0196899_1068297Not Available1114Open in IMG/M
3300022851|Ga0222691_1013395Not Available1443Open in IMG/M
3300022907|Ga0255775_1333321Not Available515Open in IMG/M
3300023116|Ga0255751_10389324Not Available693Open in IMG/M
3300023176|Ga0255772_10087326Not Available2006Open in IMG/M
3300023176|Ga0255772_10304614Not Available843Open in IMG/M
3300023229|Ga0222661_1022951Not Available927Open in IMG/M
3300025652|Ga0208134_1056621All Organisms → Viruses → Predicted Viral1219Open in IMG/M
3300025671|Ga0208898_1116568Not Available779Open in IMG/M
3300025759|Ga0208899_1216852Not Available595Open in IMG/M
3300025769|Ga0208767_1052492Not Available1893Open in IMG/M
3300025769|Ga0208767_1154219Not Available831Open in IMG/M
3300025853|Ga0208645_1034633All Organisms → Viruses → Predicted Viral2573Open in IMG/M
3300025853|Ga0208645_1107939Not Available1137Open in IMG/M
3300025889|Ga0208644_1021055Not Available4107Open in IMG/M
3300025889|Ga0208644_1058982Not Available2076Open in IMG/M
3300025889|Ga0208644_1065347Not Available1933Open in IMG/M
3300025889|Ga0208644_1292966Not Available650Open in IMG/M
3300026138|Ga0209951_1052866Not Available869Open in IMG/M
3300026183|Ga0209932_1050918Not Available996Open in IMG/M
3300026187|Ga0209929_1019054Not Available2147Open in IMG/M
3300026187|Ga0209929_1022481Not Available1952Open in IMG/M
3300026187|Ga0209929_1141733Not Available593Open in IMG/M
3300034418|Ga0348337_029439All Organisms → Viruses → Predicted Viral2555Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous33.64%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water16.82%
Pond WaterEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water10.28%
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh9.35%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater7.48%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient3.74%
Pelagic MarineEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine3.74%
Saline Water And SedimentEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Epilimnion → Saline Water And Sediment3.74%
Saline WaterEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water1.87%
Saline Water And SedimentEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water And Sediment1.87%
Saline Water And SedimentEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Sediment → Saline Water And Sediment1.87%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine0.93%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Seawater0.93%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine0.93%
MarineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine0.93%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine0.93%
MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine0.93%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000116Marine microbial communities from Delaware Coast, sample from Delaware MO Spring March 2010EnvironmentalOpen in IMG/M
3300001419Saline surface water microbial communities from Etoliko Lagoon, Greece - halocline water (15 m)EnvironmentalOpen in IMG/M
3300001748Saline surface water microbial communities from Etoliko Lagoon, Greece - surface water (0 m)EnvironmentalOpen in IMG/M
3300005239Environmental Genome Shotgun Sequencing: Ocean Microbial Populations from the Gulf of MaineEnvironmentalOpen in IMG/M
3300005512Saline surface water microbial communities from Etoliko Lagoon, Greece - halocline_waterEnvironmentalOpen in IMG/M
3300005611Saline surface water microbial communities from Etoliko Lagoon, GreeceEnvironmentalOpen in IMG/M
3300006025Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_DNAEnvironmentalOpen in IMG/M
3300006027Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_<0.8_DNAEnvironmentalOpen in IMG/M
3300006802Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18EnvironmentalOpen in IMG/M
3300006810Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01EnvironmentalOpen in IMG/M
3300006867Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_<0.8_DNAEnvironmentalOpen in IMG/M
3300006868Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_>0.8_DNAEnvironmentalOpen in IMG/M
3300006869Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_>0.8_DNAEnvironmentalOpen in IMG/M
3300006874Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_>0.8_DNAEnvironmentalOpen in IMG/M
3300006919Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21EnvironmentalOpen in IMG/M
3300007344Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4EnvironmentalOpen in IMG/M
3300007345Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30EnvironmentalOpen in IMG/M
3300007539Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaGEnvironmentalOpen in IMG/M
3300007960Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1D Viral MetaGEnvironmentalOpen in IMG/M
3300009000Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_B_H2O_MGEnvironmentalOpen in IMG/M
3300009001Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_C_H2O_MGEnvironmentalOpen in IMG/M
3300009077Pelagic marine microbial communities from North Sea - COGITO_mtgs_110328EnvironmentalOpen in IMG/M
3300009437Pelagic marine microbial communities from North Sea - COGITO_mtgs_110414EnvironmentalOpen in IMG/M
3300009443Pelagic marine microbial communities from North Sea - COGITO_mtgs_110421EnvironmentalOpen in IMG/M
3300010299Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.2_DNAEnvironmentalOpen in IMG/M
3300010300Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.2_DNAEnvironmentalOpen in IMG/M
3300010368Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.2_DNAEnvironmentalOpen in IMG/M
3300010883western Arctic Ocean co-assemblyEnvironmentalOpen in IMG/M
3300011254Seawater microbial communities from Japan Sea near Toyama Prefecture, Japan - 2015_1, 0.02EnvironmentalOpen in IMG/M
3300012953Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 2 MetagenomeEnvironmentalOpen in IMG/M
3300017697Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.2_DNA (version 2)EnvironmentalOpen in IMG/M
3300017710Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 26 SPOT_SRF_2011-09-28EnvironmentalOpen in IMG/M
3300017728Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 42 SPOT_SRF_2013-04-24EnvironmentalOpen in IMG/M
3300017740Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 41 SPOT_SRF_2013-03-13EnvironmentalOpen in IMG/M
3300017744Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 20 SPOT_SRF_2011-02-23EnvironmentalOpen in IMG/M
3300017751Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 13 SPOT_SRF_2010-07-21 (version 2)EnvironmentalOpen in IMG/M
3300017765Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 36 SPOT_SRF_2012-09-28EnvironmentalOpen in IMG/M
3300017783Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 2 SPOT_SRF_2009-07-10EnvironmentalOpen in IMG/M
3300017786Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 47 SPOT_SRF_2013-09-18EnvironmentalOpen in IMG/M
3300017958Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018417Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011507BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018421Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018424Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300019459Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011511BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300020403Marine microbial communities from Tara Oceans - TARA_B100000085 (ERX556015-ERR599145)EnvironmentalOpen in IMG/M
3300021957Estuarine water microbial communities from San Francisco Bay, California, United States - C33_18DEnvironmentalOpen in IMG/M
3300021958Estuarine water microbial communities from San Francisco Bay, California, United States - C33_27DEnvironmentalOpen in IMG/M
3300021959Estuarine water microbial communities from San Francisco Bay, California, United States - C33_13DEnvironmentalOpen in IMG/M
3300021962Estuarine water microbial communities from San Francisco Bay, California, United States - C33_649DEnvironmentalOpen in IMG/M
3300021964Estuarine water microbial communities from San Francisco Bay, California, United States - C33_34DEnvironmentalOpen in IMG/M
3300022063Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (v2)EnvironmentalOpen in IMG/M
3300022187Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (v3)EnvironmentalOpen in IMG/M
3300022851Saline water microbial communities from Ace Lake, Antarctica - #1237EnvironmentalOpen in IMG/M
3300022907Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011511BT metaGEnvironmentalOpen in IMG/M
3300023116Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412BT metaGEnvironmentalOpen in IMG/M
3300023176Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071411BT metaGEnvironmentalOpen in IMG/M
3300023229Saline water microbial communities from Ace Lake, Antarctica - #551EnvironmentalOpen in IMG/M
3300025652Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (SPAdes)EnvironmentalOpen in IMG/M
3300025671Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4 (SPAdes)EnvironmentalOpen in IMG/M
3300025759Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (SPAdes)EnvironmentalOpen in IMG/M
3300025769Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (SPAdes)EnvironmentalOpen in IMG/M
3300025853Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (SPAdes)EnvironmentalOpen in IMG/M
3300025889Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18 (SPAdes)EnvironmentalOpen in IMG/M
3300026138Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_A_H2O_MG (SPAdes)EnvironmentalOpen in IMG/M
3300026183Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_B_H2O_MG (SPAdes)EnvironmentalOpen in IMG/M
3300026187Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_C_H2O_MG (SPAdes)EnvironmentalOpen in IMG/M
3300034418Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28 (v4)EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
DelMOSpr2010_1003556113300000116MarineMAEEEKKHGVKDPNKGTDGKLASNMTGEAIEGNYDYGNITDGDKKVVTEIIDLMRQRGDVPCSMFAEELKTRF
JGI11705J14877_1003266123300001419Saline Water And SedimentMAEEEKKHGVKDPNEGTNGKLASNMTGEAIESNYDYGXXXDSDKKVVREIIDLMRQRDQVPCGMFAEELKTRF
JGI11705J14877_1003285313300001419Saline Water And SedimentMAEEEKKHGVKDPNEGTDGYVASNMTGEAIEPNYDYGDITERDKKVVKEIIDLMRQRDQVPCGMFAEELKTRFE
JGI11772J19994_100717033300001748Saline Water And SedimentMAEEEKKHGVKDPNEGTNGKLASNMTGEAIESNYDYGNITDSDKKVVREIIDLMRQRDQVPCGMFAEELKTRFEL
JGI11772J19994_104041413300001748Saline Water And SedimentMAEEEKKHGVKDPNEGTDGYVASNMTGEAIEPNYDYGDITERDKKVVKEIIDLMRQRDQVPCGMFAEELKTRFELVEIPM
Ga0073579_164394823300005239MarineMAEKEKKYGVTEPNRGLHGKLASNMTGEPIDGPYDYGNITERDKKLVNEIIDLMRDRSEIPCSMFAEELKTRFQLVEIPMK
Ga0074648_100488813300005512Saline Water And SedimentMKMAEEEKKYGVKNPNEGTDGKLASNMTGEAIESNYDYGDISDSDKKVVREIIDLMRQRDQVPCGMFAEELKTKFEL
Ga0074648_108119413300005512Saline Water And SedimentMAEEEKKHGVKDPNEGTGGKLASNMTGEAIESNYDYGNITDSDKKVVREIIDLMRQRDQVPCGM
Ga0074647_100895413300005611Saline Water And SedimentMAEEEKKHGVKDPNEGTNGKLASNMTGEAIESNYDYGNITDSDKKVVREIIDLMRQRDQVPCGMF
Ga0074647_100909613300005611Saline Water And SedimentMAEEEKKYGVKNPNEGTDGKLASNMTGEAIESNYDYGDISDSDKKVVREIIDLMRQRDQVPCGMF
Ga0075474_1009808023300006025AqueousMAEEEKKHGVKDPNEGTNGKLASNMTGEAIESNYDYGNITDSDKKVVREIIDLMRQRDQVPCGMFAEELKTRFELVEIP
Ga0075474_1014278823300006025AqueousMAEEEKKHGVKDPNEGTNGKLASNMTGEAIESNYDYGSISDSDKKVVREIIDLMRQRDQVPCGMFAEELKTRFELVEIP
Ga0075462_1021005513300006027AqueousMAEEEKKHGVKDPNEGTDGKLASNMTGEAIEGNYDYGNITDGDKKVVTEIIDLMRQRGDVPCSMFAEELKTRF
Ga0070749_1008081733300006802AqueousMAEEEKKHGVKDPNEGTNGKLASNMTGEAIESNYDYGNITDSDKKVVREIIDLMRQRDQVPCGMFAEELKTRFELVEIPM
Ga0070754_1009710123300006810AqueousMAEEEKKHGVKDPNEGTNGKLASNMTGEAIESNYDYGSISDSDKKVVREIIDLMRQRDQVPCGMFAEELKTRFELVEIPM
Ga0075476_1002744633300006867AqueousMAEEEKKYGVKDPNEGTDGKMASNMTGEAIESNYDYGDISDSDKKVVREIIDLMRQRDQVPCGMFAEELKTRFQLVE
Ga0075476_1012249323300006867AqueousMAEEEKKYGVKNPNEGTDGKLASNMTGEAIEGNYDYGNITDSDKKVVREIIDLMRQRDQVPCGMFAEELKTRFELVEIP
Ga0075481_1022520213300006868AqueousMAEEEKKYGVKNPNEGTDGKLASNMTGEAIEGNYDYGNISDSDKLVVREIIDLMRQRDQVPCGMFAEELKTRFQL
Ga0075477_1029789723300006869AqueousMAEEEKKYGVKDPNEGTDGKMASNMTGEAIESNYDYGDISDSDKKVVREIIDLMRQRDQVPCGMFAEELKTRF
Ga0075475_1036593113300006874AqueousMAEEEKKYGVKDPNEGIDGKLASNMTGEAIESNYDYGSISDNDKKVVREIIDLMRKRDQVPCGMFAEELKTRFELV
Ga0070746_1003792643300006919AqueousMAEEEKKHGVKDPNEGTNGKLASNMTGEAIEGNYDYGSISDSDKKVVREIIDLMRARDQVPCGMFAE
Ga0070746_1005223933300006919AqueousMAEEEKKYGVKDPNEGTDGKMASNMTGEAIESNYDYGDISDSDKKVVREIIDLMRQRDQVPCGMFA
Ga0070746_1006444133300006919AqueousMAEEEKKHGVKDPNEGTNGKLASNMTGEAIESNYDYGNITDSDKKVVREIIDLMRQRDQVPCGMFAEEL
Ga0070746_1011283213300006919AqueousMAEEEKKYGVKNPNEGTDGKLASNMTGEAIEGNYDYGNITDSDKKVVREIIDLMRQRDQVPCGMFAEELKTRF
Ga0070745_103763933300007344AqueousMAEEEKKHGVKDPNEGTNGKLASNMTGEAIESNYDYGSISDSDKKVVREIIDLMRQRDQVPCGMFAEELKTRFELVEIPMKK
Ga0070745_124695823300007344AqueousMAEEEKKYGVKDPNEGVDGKLASNMTGEAIESNYDYGSISDSDKKVVKEIIDLMRQRDQVPCGMFAEELKTRFELVEIPMKK
Ga0070752_105017423300007345AqueousMAEEEKKYGVKDPNEGTDGKMASNMTGEAIESNYDYGDISDSDKKVVREIIDLMRQRDQVPCGMFAEELKT
Ga0070752_105577613300007345AqueousMAEEEKKHGVKDPNEGTNGKLASNMTGEAIESNYDYGNITDSDKKVVREIIDLMRQRDQVPCGMFAEELKTRF
Ga0070752_116218813300007345AqueousMAEEEKKYGVKDPNEGIDGKLASNMTGEAIESNYDYGSISDSDKKVVREIIDFLRQREQVPVGMIVEELKTRFQLVEI
Ga0099849_115058413300007539AqueousMKMADEKIDGKYGVKDPNEGVGGKLASNMTGEAIEGLYDYGSISDGDKAVVNEIIKLLRERKGVPSEMVVEELKTKFDLVEVPMKKI
Ga0099850_104066813300007960AqueousMAEEEKKYGVKDPNEGTNGKLASNMTGEAIESNYDYGSISDSDKKVVREIIDLMRQRDQVPCGMFAE
Ga0099850_104849623300007960AqueousMKMAEKKYGVKEPNEGTNGAVASNMTGEAIESNYDYGSISDSDKKVVREIIDLMRQRDQVPCGMFAE
Ga0102960_118079023300009000Pond WaterMAEEEKKHGVKNPNEGTDGKLASNMTGEAIESNYDYGSISDSDKKVVREIIDLMRQRDQVPCG
Ga0102960_128665013300009000Pond WaterMAEEEKKYGVKDPNEGTDGKLASNMTGEAIESNYDYGSISDSDKKVVREIIDLMRNRGEVPCSMSEEELKTR
Ga0102960_131286623300009000Pond WaterMKMAEKKYGVKEPNEGTNGAVASNMTGEAIESLYDYGDITDSDKKVVREIIDLMRNRGDVPCSMFAEELKTRFQLVEIPMKKIE
Ga0102963_139441323300009001Pond WaterMAEEEKKYGVKEPNEGTDGKMASNMTGEAIESNYDYGSISDSDKKVVREIIDLMRQRDQVPCGMFAEELKT
Ga0102963_142956423300009001Pond WaterMKMAEEEKKHGVKNPNEGTGGKLASNMTGEAIESNYDYGNISDSDKKVVREIIDLMRSRDQVPCGMFAEELKTRF
Ga0102963_144821323300009001Pond WaterMAEEEKKHGVKNPNEGTDGYVASNMTGEAIQPNYDYGEITERDKKVVREIIDLMRKRDQVPCGMFAEELK
Ga0115552_137933223300009077Pelagic MarineMAEKEKKYGVTEPNRGLHGKLASNMTGEPIEGPYDYGNITERDKKLVNEIIDLMRDRSEIPCSMFAEELKTRFQLVEIP
Ga0115556_112420513300009437Pelagic MarineMAEEEKKHGVKDPNEGTNGKLASNMTGEAIEGNYDYGNITDSDKKVVTEIIDLMRQRGDVPCSMFAEELKTRFQM
Ga0115557_113460213300009443Pelagic MarineMAEEEEKHGVKNPNEGTDGKLASNMTGEAIEGNYDYGNITDGDKKVVTEIIDLMRQRGDVPCSMFAEELKTRFQMVEIPMKS
Ga0115557_115735523300009443Pelagic MarineMAEEEKKHGVKNPNEGTDGKLASNMTGEAIEGNYDYGNITDSDKKVVTEIIDLMRQRGDVPCSMFAEELKTRFQMVEIPMKS
Ga0129342_103608523300010299Freshwater To Marine Saline GradientMAEEEKKYGVKDPNKGTNGKLASNMTGEAIEGNYDYGNITDSDKKVVREIIDLMRQRDQVPCGMFAEELKTRFQMVEIP
Ga0129351_126701133300010300Freshwater To Marine Saline GradientMKMADEKIDGKYGVKNPNEGVDGKLASNMTGEAIEGLYDYGSISDGDKAVVNEIIKLLRERKGVPSEMVVEELKTK
Ga0129324_1020266623300010368Freshwater To Marine Saline GradientMAEEEKKYGVKNPNEGVDGKLASNMTGEAIESNYDYGSISDSDKKVVREIIDLMRQRDQVPCGMFAEELKT
Ga0133547_1111888013300010883MarineMAEEEKKHGVKNPNEGTDGKLASNMTGEAIEGNYDYGDITDSDKKVVTEIIDLMRQRGDVPCSMFAEELKTRFQMVEIPMQS
Ga0151675_101487713300011254MarineMKMAEEEKKYGVKNPNEGIGGKLASNMTGEAIENNYDYGDITDSDKKVVREIIDLMRDRGNVPCSMF
Ga0163179_1055930523300012953SeawaterMAEEEKKHGVKNPNEGTDGKLASNMTGEAITGVYDYGDIKDSDKVVVREIIDLMRNRGDVPCSIFAEELK
Ga0180120_1006790913300017697Freshwater To Marine Saline GradientMAEEEKKHGVKDPNKGTDGKLASNMTGEAIEGNYDYGNITDGDKKVVTEIIDLMRQRGEVPCSMFAEELKTR
Ga0181403_111217923300017710SeawaterMAEEEKKYGVKDPNEGTNGKVASNMTGEAITGIYDYGNITDSDKLLVKEIIDLLRERDQVPCGMFAEEL
Ga0181419_103300623300017728SeawaterMAEEEKKYGVKEPNRGTEGKMASNMTGEAIEGLYDYGNITDSDKLLVKEIIDLLRQRDQVPCGMFAEELKTRFQLVEIPMKKIEDS
Ga0181418_101822633300017740SeawaterMAEEEKKYGVKEPNKGEDGNLASNMTGEAITSTFNYGDITERDKKVVEEILELMRDRSNVPCGMFAEELK
Ga0181397_112199823300017744SeawaterMAEEEKKYGVKEPNKGEDGNLASNMTGEAITSTFNYGDITERDKKVVEEILELMRDRSNVPCGMFAE
Ga0187219_117093613300017751SeawaterMAEEEKKYGVKEPNRGTEGKMASNMTGEAIEGLYDYGNITDSDKLLVKEIIDLLRQRDQVPCGMFAE
Ga0181413_114457023300017765SeawaterMSEENKKHGVKNPNEGTDGKLASNMTGEAITGVYNYGEVSDSDKVVVREIIDLMRNRGEVPCSMFA
Ga0181379_101211053300017783SeawaterMTEEEKKYGVKNPNEGVDGKLASNMTGEAIESNYDYGNITDSDKKVVREIIDLMRQRDQVSCGMFAEELKTRFQMVEI
Ga0181424_1006318823300017786SeawaterMAEEEKKYGVKDPNEGTNGKVASNMTGEAITGIYDYGNISDSDKILVTEIIDLMRNRGEVPCS
Ga0181582_1093152723300017958Salt MarshMAEEEKKHGVKDPNEGTNGKLASNMTGEAIESNYDYGSISDSDKKVVREIIDLMRSRDQVPCGMFAEELKTRFE
Ga0181558_1052842213300018417Salt MarshMAEEEKKYGVKEPNRGTDGKLASNMTGEAIEGLYDYGNITDSDKLLVKEIIDLLRERDQVPCGMFA
Ga0181592_1069489513300018421Salt MarshMAEEEKKHGVKDPNEGTNGKLASNMTGEAIESNYDYGSISDSDKKVVREIIDLMRQRDQVPCGMFAEELKTRFELVEIPMKKIEDS
Ga0181591_1100250613300018424Salt MarshMAEKKKKYGVKEPNEGTNGKMASNMTGEAIESNYDYGSISDSDKKVVREIIDLMRQRDQVPCGMFAEELKTRF
Ga0181591_1104237213300018424Salt MarshMAEKEKKYGVKEPNEGTNGKVASNMTGEAIEGNYDYGSISDSDKKVVREIIDFLRQREQVPVGMIVEELKN
Ga0181562_1050165923300019459Salt MarshMAEEEKKYGVKEPNAGTDGKVASNMTGEAIEGPYDYGNITDSDKKVVSEIIDLMRQRDQVPCGMFAEELKT
Ga0211532_1008140133300020403MarineMAEKIDGKYGVKNPNEGTDGKVASNMTGEAITGVYDYGSISESDKNVVNEIITLLHQRKGIPVEMIIEELKTKFELVEIPMKKIE
Ga0222717_1011722513300021957Estuarine WaterMAEEEKKHGVKNPNEGTNGKLASNMTGEAIESNYDYGNITDNDKKVVREIIDLMRSRDQVPCGMFAEELKTRFELVEIPMK
Ga0222718_1007795333300021958Estuarine WaterMAEEEKKHGVKDPNEGTGGKLASNMTGEAIESNYDYGNITDSDKKVVREIIDLMRSRDQVPCGMFAEELKTRFELVEIPMK
Ga0222718_1007876613300021958Estuarine WaterMAEEEKKHGVKDPNEGTDGKLASNMTGEAIESNYDYGSISDRDKKVVREIIDLMRSRDQVPCGMFAEELKTRFELVEIPMKKIE
Ga0222718_1008152013300021958Estuarine WaterMAEEEKKYGVKDPNEGTNGKLASNMTGEAIESNYDYGSISDSDKKVVREIIDLMRQRDQVPCGMFAEELKTRFELVEIP
Ga0222718_1014928523300021958Estuarine WaterMAEEEKKHGVKNPNEGTDGKLASNMTGEAIESNYDYGSISDSDKKVVREIIDLMRQRDQVPCGMFAEELKT
Ga0222716_1006973533300021959Estuarine WaterMAEEEKKHGVKDPNEGTDGKLASNMTGEAIESNYDYGSISDSDKKVVREIIDLMRQRDQVPCGMFAEELKT
Ga0222716_1023063323300021959Estuarine WaterMAEEEKKHGVKDPNEGTGGKLASNMTGEAIESNYDYGSISDSDKKVVREIIDLMRNRGDVPCSMFAEELKTRFQMV
Ga0222716_1071090413300021959Estuarine WaterMAEEEKKHGVKDPNEGTGGKLASNMTGEAIEGNYDYGNITDSDKKVVTEIIDLMRQRGDVPCSMFAE
Ga0222713_1004567643300021962Estuarine WaterMAEEEKFGVKNPNEGTDGKMASNMTGEAIQPNYDYGNITDSDKKVVKEIIDLLNARGMVPCSIFAEELKTRFQIEQIPMKPIE
Ga0222719_1004742563300021964Estuarine WaterMAEEEKKYGVKEPNEGVDGAVASNMTGEAIESNYDYGNITDSDKKVVREIIDLMRKRDQVPCGMFAEELKTRF
Ga0222719_1007916933300021964Estuarine WaterMAEEEKKHGVKEPNEGTDGKLASNMTGEAIESNYDYGDISDSDKKVVREIIDLMRQRDQVPCGMFAEELKTRFELVEIPM
Ga0222719_1008803813300021964Estuarine WaterMAEEEKKHGVKDPNEGTNGKLASNMTGEAIESNYDYGNITDSDKKVVREIIDLMRSRDQVPCGMFAEELKTRFELVEIPMKKIE
Ga0222719_1010384033300021964Estuarine WaterMAEEEKKHGVKDPNEGTGGKLASNMTGEAIESNYDYGSISDSDKKVVREIIDLMRNRGDVPCSMFAEELKTRFELVEIPMK
Ga0222719_1010867313300021964Estuarine WaterMAEEEKKYGVKDPNEGTNGKLASNMTGEAIESNYDYGSISDSDKKVVREIIDLMRQRDQVPCGMFAEELKTRFELV
Ga0222719_1011344223300021964Estuarine WaterMAEEEKKHGVKDPNEGTNGKLASNMTGEAIESNYDYGNITDSDKKVVREIIDLMRNRGEVPCGMFAEELKTRFELVEIPMK
Ga0222719_1012483613300021964Estuarine WaterMAEKEKKHGVKDPNEGTGGKLASNMTGEAIESNYDYGSISDSDKKVVREIIDLMRNRGEVPCGMFAEELKTRFQLVEIPM
Ga0222719_1015240813300021964Estuarine WaterMAEEEKKHGVKNPNEGTGGKLASNMTGEAIESNYDYGNISDSDKKVVREIIDLMRSRDQVPCGMFAEELKTRFELVEIPMK
Ga0222719_1071324213300021964Estuarine WaterMAEEEKKHGVKDPNEGTDGKLASNMTGEAIESNYDYGNISDSDKKVVTEIIDLMRNRAQVPCGMFAEELKTRFELVE
Ga0212029_106529813300022063AqueousMAEEEKKHGVKNPNEGTDGKVASNMTGEAIQPNYDYGNITDSDKKVVNEIIDLMRQRDQVPCGMFV
Ga0196899_106829723300022187AqueousMAEEEKKYGVKNPNEGVDGKLASNMTGEAIESNYDYGNITDSDKKVVREIIDFLRQREQVPVSMVAEELKTRFQLVEI
Ga0222691_101339513300022851Saline WaterMAEEEKKHGVKNPNEGTDGKLASNMTGEAIEGNYDYGNITDGDKKVVTEIIDLMRQRGDVPCSMFAEELKARFQMVEIPMKSI
Ga0255775_133332113300022907Salt MarshMAEEEKKYGVKDPNEGTDGMLASNMTGEAIEGNFDYGSISERDKKVVREIIDLMRQRDQVPCGMFAEELKTRFE
Ga0255751_1038932413300023116Salt MarshMAEEEKKYGVKDPNEGTNGKLASNMTGEAIESNYDYGSISDSDKKVVREIIDLMRQRDQVPCGMFAEELKTR
Ga0255772_1008732613300023176Salt MarshMAEKKKKYGVKEPNEGTNGKMASNMTGEAIESNYDYGSISDSDKKVVREIIDLMRQRDQVPCGMFAEELKTRFQLVEIP
Ga0255772_1030461423300023176Salt MarshMAEEEKKYGVKDPNEGTNGKLASNMTGEAIESNYDYGSISDSDKKVVREIIDLMRQRDQVPCGMFAEELKTRFQLVEIP
Ga0222661_102295123300023229Saline WaterMAEEEKKHGVKNPNEGTDGKLASNMTGEAIEGNYDYGNITDGDKKVVTEIIDLMRQRGDVPCSMFAEELKTRFQMVEIPMRKIEDS
Ga0208134_105662133300025652AqueousMADEKIDGKYGVKDPNEGVGGKLASNMTGEAIEGNYDYGNITDGDKKVVTEIIDLMRQRGDVPCSMFAEE
Ga0208898_111656823300025671AqueousMAEEEKKHGVKDPNEGTNGKLASNMTGEAIESNYDYGSISDSDKKVVREIIDLMRQRDQVPCGMFAEELKTRFE
Ga0208899_121685223300025759AqueousMAEEEKYGVKNPNEGTDGKLASNMTGEAIESNYDYGSISDSDKKVVREIIDFLRQREQVPVGMIVEELKTRFELVEIPMK
Ga0208767_105249233300025769AqueousMAEEEKKHGVKDPNEGTNGKLASNMTGEAIESNYDYGNITDSDKKVVREIIDLMRQRDQVPCGMFAEELKTR
Ga0208767_115421913300025769AqueousMAEEEKKHGVKDPNEGTDGKLASNMTGEAIEGNYDYGNITDGDKKVVTEIIDLMRQRGEVPCSMFAEELK
Ga0208645_103463313300025853AqueousMAEEEKKYGVKDPNEGVDGKLASNMTGEAIESNYDYGSISDSDKKVVREIIDLMRKRGKVPCSMFAEELKTRFQLVEIPMKKIEDS
Ga0208645_110793923300025853AqueousMAEEEKKYGVKNPNEGTDGKLASNMTGEAIEGNYDYGNITDSDKKVVREIIDLMRQRDQVPCGMFAEELKTRFE
Ga0208644_102105543300025889AqueousMAEEEKKYGVKNPNEGTDGKLASNMTGEAIEGNYDYGNITDSDKKVVREIIDLMRQRDQVPCGMFAEEL
Ga0208644_105898233300025889AqueousMAEEEKKHGVKDPNEGTNGKLASNMTGEAIESNYDYGSISDSDKKVVREIIDLMRQRDQVPCGMFAEELKTRFELVEIPMK
Ga0208644_106534733300025889AqueousMAEEEKKHGVKDPNEGTNGKLASNMTGEAIESNYDYGNITDSDKKVVREIIDLMRQRDQVPCGMFAEELKTRFELVEIPMK
Ga0208644_129296613300025889AqueousMAEEEKKYGVKNPNEGTDGKLASNMTGEAIEGNYDYGNITDSDKKVVREIIDFLRQREQVPVGMIVEELKTRFEL
Ga0209951_105286613300026138Pond WaterMAEEEKKHGVKDPNEGTDGYVASNMTGEAIEPNYDYGDITERDKKVVREIIDLMRKRDQVPCGMFAEELKTRFELVEIP
Ga0209932_105091823300026183Pond WaterMAEEEKKHGVKDPNEGTDGYVASNMTGEAIQPNYDYGEITERDKKVVREIIDLMRKRDQVPCGMFAEELKTRFQL
Ga0209929_101905413300026187Pond WaterMAEKKYGVKEPNEGTNGAVASNMTGEAIESLYDYGDITDSDKKVVREIIDLMRNRGDVPCSMFAEELKTRFQLVEIPMKKIEDSVW
Ga0209929_102248133300026187Pond WaterMAEEEKKHGVKDPNEGTDGYVASNMTGEAIEPNYDYGDITERDKKVVREIIDLMRNRGEVPCGMFAEELKTRFELVEIPMKSI
Ga0209929_114173323300026187Pond WaterMAEEEKKHGVKNPNEGTDGKLASNMTGEAIESNYDYGNITDSDKKVVREIIDLMRNRGEIPCSMFAEELKTRFELVEIPM
Ga0348337_029439_2346_25553300034418AqueousMAEEEKKHGVKDPNEGTNGKLASNMTGEAIESNYDYGSISDSDKKVVREIIDLMRQRDQVPCGMFAEELK


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