Basic Information | |
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Family ID | F092862 |
Family Type | Metagenome |
Number of Sequences | 107 |
Average Sequence Length | 38 residues |
Representative Sequence | MIEEKCKFCGSTELVYHQYVICDSSCQECGEWQNGETI |
Number of Associated Samples | 88 |
Number of Associated Scaffolds | 107 |
Quality Assessment | |
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Transcriptomic Evidence | No |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 32.08 % |
% of genes near scaffold ends (potentially truncated) | 37.38 % |
% of genes from short scaffolds (< 2000 bps) | 74.77 % |
Associated GOLD sequencing projects | 75 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.50 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Unclassified (60.748 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (56.075 % of family members) |
Environment Ontology (ENVO) | Unclassified (83.178 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Saline → Water (saline) (79.439 % of family members) |
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Full Alignment |
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Alignment of all the sequences in the family. |
IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56. |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 0.00% β-sheet: 21.21% Coil/Unstructured: 78.79% |
Feature Viewer | |||||
Position : 0 Zoom : x 1 Enter the variants Position Original Variant |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.50 |
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Visualization |
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All Organisms Unclassified |
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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
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Visualization |
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Sediment Marine Deep Ocean Deep Subsurface Seawater Marine Sediment Marine Aqueous Seawater Estuary Water Seawater Marine Marine Pelagic Marine Seawater Marine Sediment Seawater Marine Soil Macroalgal Surface |
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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Geographical Distribution | |
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Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Protein ID | Sample Taxon ID | Habitat | Sequence |
BBAY94_101593692 | 3300000949 | Macroalgal Surface | MNKEKCKFCGSDELVYHQYIINDSSCQECGEWQNGETI* |
JGI24006J15134_101089723 | 3300001450 | Marine | MSEEKCKFCDSTELVYHQYVICDSSCQECGKWQNEKTI* |
JGI24003J15210_100961523 | 3300001460 | Marine | MNEEKCKFCDSTELVYHQYVICDSSCQECGEWQNEET |
JGI25132J35274_10266352 | 3300002483 | Marine | MSKEKCNFCGSTEMVYHQYIICDSICQECGEWQKGEYNYE* |
JGI25132J35274_10492541 | 3300002483 | Marine | EIMSKEKCKFCGSTEMVYHQYIICDSMCQECGEWQKGEYNYE* |
Ga0066856_101394823 | 3300005404 | Marine | MSKEKCKFCGSTEMVYHQYIICDSMCQECGEWQKGEYNYE* |
Ga0066845_104271252 | 3300005432 | Marine | MSKEKCKFCGSTEMVYHQYIIRDSMCQECGEWQKGEYNYE* |
Ga0070724_100093783 | 3300005609 | Marine Sediment | MIEEKCKFCGSTELVYHQYVICDSSCQECGEWQNGETI* |
Ga0078746_10445152 | 3300005821 | Marine Sediment | MSKEKCKFCGSDELVYHQYVIQDSACQECGEWQNEETI* |
Ga0098038_10389854 | 3300006735 | Marine | MEKEKCKFCGSEELVYHQYIICDNSCQECGKWQNGETINK* |
Ga0098033_10668512 | 3300006736 | Marine | MENEKCKFCNSTELVYHSYLCDSKCQDCGEWQEGEELNLHLIK* |
Ga0098033_11105753 | 3300006736 | Marine | MNKEDCKFCGSEELVYHQYIICDSCCQECGEWQNGEEL* |
Ga0098037_11734432 | 3300006737 | Marine | MEETKCKFCGSTELVYHQYTICDSACQECGEWQDGEYIK* |
Ga0098035_11404232 | 3300006738 | Marine | MNKEKCKFCGDTALVYHHYICDSKCEECGEWQEGEKYE* |
Ga0098035_12690661 | 3300006738 | Marine | EKCKFCDSTALVYHYYICDSTCEECGKWQEGEKI* |
Ga0098035_13061243 | 3300006738 | Marine | MENEKCKFCNSTELVYHSYLCDSKCQDCGEWQEGEELNLNLIK |
Ga0098040_10704152 | 3300006751 | Marine | MENEKCKFCNSIALVYNYSLCDSTCEECGEWQEGEER* |
Ga0098044_10455701 | 3300006754 | Marine | MNKEKCKFCGDTTLVYHYYICDSKCEECGEWQEGEKYE* |
Ga0098044_11002683 | 3300006754 | Marine | MNKEKCKFCGSTALVYHYYICDSTCEECGKWQEGEKYEK |
Ga0098044_13062133 | 3300006754 | Marine | MIKEKFKFCNSTALVYNYSLCDSKCEECGEWQEGEEIK |
Ga0098054_10144304 | 3300006789 | Marine | MNKEKCKFCGSTALVYHYYICDSTCEECGKWQEGEKI* |
Ga0098054_11837452 | 3300006789 | Marine | MNKDKCKFCDDTALVYHYYICDSKCEECGEWQEGEKYE* |
Ga0098055_12887311 | 3300006793 | Marine | IIMIKEKCKFCNSTALVYNYSLCDSKCEECGEWQEGEEIYVKKIY* |
Ga0098053_10098802 | 3300006923 | Marine | MENEKCKFCNSIALVYNYSLCDSTCEECGKWQEGEKI* |
Ga0098053_10144005 | 3300006923 | Marine | MNKEKCKFCDSTALVYHYYICDSKCEECGEWQEGEK |
Ga0098041_10853224 | 3300006928 | Marine | MNKEKCKFCGSEELVYHQYIICDNSCQECGKWQNGETINK* |
Ga0098041_12157463 | 3300006928 | Marine | EKCKFCNSIALVYNYSLCDSKCEECGEWQEGEER* |
Ga0098036_11900051 | 3300006929 | Marine | MENEKCTFCNSIALVYNYLLCDSKCEECGEWQEGEER* |
Ga0098036_12060402 | 3300006929 | Marine | MNKEKCKFCGDIALVYHYSICDSKCEECGEWQEGEKYE* |
Ga0099846_10985643 | 3300007542 | Aqueous | MNEEKCKFCDSTELVYHQYVICDSSCQECGEWQNEETI* |
Ga0105739_11562031 | 3300007954 | Estuary Water | TKVRVMIEEKCKFCGNTELVYHQYVICDSSCQECGEWQNGETI* |
Ga0105741_10753831 | 3300007956 | Estuary Water | IMIEEKCKFCGSTELVYHQYVICDSSCQECGEWQNGETI* |
Ga0098052_11526672 | 3300008050 | Marine | MNKEKCKFCGSKELVYHQYIICDYSCEECGEWQNGEE |
Ga0117902_11946636 | 3300009104 | Marine | MENEKCKFCNSIALVYNYSLCDSKCEECGEWQEGEKI* |
Ga0114995_100527077 | 3300009172 | Marine | MSEEKCKFCDSTELVYHQYVICDSSCQECGEWQNEETI* |
Ga0114993_101570435 | 3300009409 | Marine | MKKCKFCGSKELTYHQYIIMDYSCCECGEWQNGDYINE* |
Ga0115553_11510983 | 3300009445 | Pelagic Marine | MSKEKCKFCGSKELVYHQYVICDSSCQECGEWQNGETI* |
Ga0115553_14271332 | 3300009445 | Pelagic Marine | MSKEKCKFCGSKELVYHQYVICDSSCQECGEWQNGETI*V |
Ga0115560_11299802 | 3300009447 | Pelagic Marine | MSKEKCKFCGSKELVYHQYVICDSSCQECGEWQNG |
Ga0114925_100897131 | 3300009488 | Deep Subsurface | MEKVKCKFCGGEELVYHQYIICDHSCEECGEWQNGEYI* |
Ga0115011_115825163 | 3300009593 | Marine | MIKEKCKFCNSIALVYNYSLCDSKCEECGEWQEGEEIK* |
Ga0098049_10213902 | 3300010149 | Marine | MNKEKCKFCGSTALIYHYYICDSTCEECGKWQEGEKYEKINI* |
Ga0098049_11086002 | 3300010149 | Marine | MIKEKCKFCNSTALVYNYSLCDSKCEECGEWQEGEEIK* |
Ga0098049_11351342 | 3300010149 | Marine | MNKEKCKFCGDTALVYHYYICDSKCEECGEWQEGEKYE* |
Ga0098049_12021124 | 3300010149 | Marine | MIKEKCKFCNSTALVYNYSLCDSKCEECGEWQEGE |
Ga0098056_10147174 | 3300010150 | Marine | MNKEKCKFCGSTALVYHYYICDSTCEECGKWQEGEKYEKINI* |
Ga0098061_12723452 | 3300010151 | Marine | MIKEKCKFCNSTALVYNYSLCDSKCEECGEWQEGEEIYVKKIY* |
Ga0164315_111536253 | 3300013099 | Marine Sediment | IKQLKMENEKCKFCNSTELVYHSYLCDSKCQDCGEWQEGEER* |
Ga0164313_101245097 | 3300013101 | Marine Sediment | MIKEKCKFCNSTALVYHHSFHFADSKCEECGEWQEGEEIK* |
Ga0164313_109759821 | 3300013101 | Marine Sediment | MSKCKFCGSTELVYHQYIICDSKCQECGEWQNGDY |
Ga0171651_10900505 | 3300013115 | Marine | MENEKCKFCNSIALVYNYSLCDSKCEECGQWQEGEK |
Ga0181372_10445582 | 3300017705 | Marine | MSKCKFCGSTELVYHQYIICDSKCQECGEWQNGDYL |
Ga0181373_10446524 | 3300017721 | Marine | MEKCKFCGSTELVYHQYVICDSACQECGEWQNGDYITQTKYEH |
Ga0181419_10336504 | 3300017728 | Seawater | MIEEKCKFCGSTELVYHQYIICDSSCQDCGEWQNGE |
Ga0181433_10727512 | 3300017739 | Seawater | MRYLKKEKMDKCKFCGSTELVYHQYVICDSVCQECGEWQKGEYNYE |
Ga0181402_11649182 | 3300017743 | Seawater | CLKHLEIMSKEKCKFCGSTELVYHQYIICDSSCQDCGEWQNGEEI |
Ga0181420_10353241 | 3300017757 | Seawater | EIMSKEKCKFCGSTELVYHQYIICDSSCQACGEWQNGEEI |
Ga0181409_11447421 | 3300017758 | Seawater | EKCKFCGSTELVYHQYIICDSSCQDCGEWQNGEEI |
Ga0187217_10430153 | 3300017770 | Seawater | MNEEKCKFCDSTELVYHQYVIRDSSCQECCEWQNGETI |
Ga0181430_10855645 | 3300017772 | Seawater | MENEKCKFCNSIALVYNYSLCDSKCEECGEWQEGEEIK |
Ga0193991_10262071 | 3300019720 | Sediment | MNEDKCKFCGSTELVYHQYTICDSSCQECGEWQSGDYI |
Ga0206131_101003423 | 3300020185 | Seawater | MNEDKCKFCDSTELVYHQYVICDSSCQECGEWQNEETI |
Ga0206130_101908081 | 3300020187 | Seawater | MNKEKCKFCGSDELVYHQYVIQDSACQECGEWQNEETI |
Ga0211643_1000239620 | 3300020457 | Marine | MEKEKCKFCGSEELVYHQYIICDNSCQECGKWQNGETINK |
Ga0206684_12798633 | 3300021068 | Seawater | MSKCKFCDSTALVYHSYICDSKCEECGEWQEGEDIIV |
Ga0206683_102438382 | 3300021087 | Seawater | MNKEKCKFCGDIALVYHYSICDSKCEECGEWQEGEKYE |
Ga0206685_1000387110 | 3300021442 | Seawater | MENEKCKFCNSIALVYNYSLCDSKCEECGEWQEGEER |
Ga0196901_11102821 | 3300022200 | Aqueous | MNEEKCKFCDSTELVYHQYVICDSSCQECGEWQNEETI |
(restricted) Ga0233432_100405183 | 3300023109 | Seawater | MSKCKFCGSKELVYHQYVIRDSSCQECGEWQNGETI |
(restricted) Ga0233412_102367553 | 3300023210 | Seawater | EKKCKFCGSTELVYHQYVIRDSSCQECGEWQNGETI |
Ga0228672_100577312 | 3300024335 | Seawater | MSKCKFCGSTELVYHQYVICDSSCQECGEWQNGETIRNYE |
(restricted) Ga0255043_100167306 | 3300024338 | Seawater | KKCKFCGSTELVYHQYVIRDSSCQECGEWQNGETI |
Ga0209977_103473303 | 3300024432 | Deep Subsurface | MEKVKCKFCGGEELVYHQYIICDHSCEECGEWQNGEYI |
Ga0207896_10021539 | 3300025071 | Marine | MNEEKCKFCNDTALVYNFYICDSKCEECGEWQEGESYE |
Ga0208298_10134696 | 3300025084 | Marine | MIKEKCKFCNSTALVYNYSLCDSKCEECGEWQEGEEIK |
Ga0208011_11006132 | 3300025096 | Marine | MNKEKCKFCGDTALVYHYYICDSKCEECGEWQEGEKYE |
Ga0208434_11006703 | 3300025098 | Marine | KFCGSTELVYHQYVICDSSCQECGEWQNGETIRNYE |
Ga0208013_10334162 | 3300025103 | Marine | MNKEKCKFCGSTALVYHYYICDSTCEECGKWQEGEKI |
Ga0208793_11706211 | 3300025108 | Marine | MNKCKFCGSTKLVYHQYIICDSKCQECGEWQNGDYLEDQDLS |
Ga0208553_11294112 | 3300025109 | Marine | MNKEECKFCGSEELVYHQYIICDSCCQECGEWQNGEEL |
Ga0208158_10792321 | 3300025110 | Marine | MNKEKCKFCGSTALVYHYYICDSTCEECGKWQEGEKYEKINI |
Ga0208790_10641983 | 3300025118 | Marine | MNKEKCKFCGSTALVYHYYICDSTCEECGKWQEGEKYE |
Ga0208790_10736013 | 3300025118 | Marine | MNKCKFCGSTELVYHQYIICDSKCQECGEWQNGDYLEDQSL |
Ga0208790_11147101 | 3300025118 | Marine | MNKEKCKFCDSTALVYHYYICDSKCEECGEWQEGEKI |
Ga0209644_10044187 | 3300025125 | Marine | MSKEKCKFCNSTELIYHYYLCDSKCQDCGEWQEGETI |
Ga0208919_10211708 | 3300025128 | Marine | MENEKCTFCNSIALVYNYLLCDSKCEECGEWQEGEER |
Ga0208919_11647101 | 3300025128 | Marine | MSKCKFCGSTELVYHQYIICDSKCQECGEWQNGDYLEGQDL |
Ga0209232_100772510 | 3300025132 | Marine | MSKEKCNFCGSTEMVYHQYIICDSICQECGEWQKGEYNYE |
Ga0209756_10366375 | 3300025141 | Marine | MNKCKFCDSTALVYHYYICDSKCEECGEWQEGEEL |
Ga0209756_10401183 | 3300025141 | Marine | MNKCKFCGSTELVYHQYIICDSSCQDCGEWQNGEEI |
Ga0209337_11613522 | 3300025168 | Marine | MSEEKCKFCDSTELVYHQYVICDSSCQECGKWQNEKTIXH |
Ga0208450_10792401 | 3300025301 | Deep Ocean | MSKCKFCGSTELVYHQYIICDSKCQECGEWQNGDYLEDQSLLST |
Ga0209716_10177903 | 3300025626 | Pelagic Marine | MSKEKCKFCGSKELVYHQYVICDSSCQECGEWQNGETI |
Ga0208407_10498614 | 3300026257 | Marine | MNKEKCKFCDDTTLVYHYYICDSKCEECGEWQEGEKYE |
Ga0209192_100317982 | 3300027752 | Marine | MSEEKCKFCDSTELVYHQYVICDSSCQECGEWQNEETI |
Ga0209379_100223262 | 3300027758 | Marine Sediment | MIEEKCKFCGSTELVYHQYVICDSSCQECGEWQNGETI |
Ga0209089_104985263 | 3300027838 | Marine | MKKCKFCGSKELTYHQYIIMDYSCCECGEWQNGDYINE |
(restricted) Ga0255054_100280759 | 3300027856 | Seawater | MNKEKCKFCGSTELVYHQYIICDSKCQECGEWQNGDYLEDQDLSST |
Ga0209013_100484566 | 3300027858 | Marine | MSKCKFCGSKELVYHQYGICDSSCQECGEWQNGETI |
(restricted) Ga0255052_100646734 | 3300027865 | Seawater | MSKCKFCGSTELVYHQYIICDSKCQECGEWQNGDYLEGQDLS |
(restricted) Ga0255055_100959275 | 3300027881 | Seawater | MSKCKFCGSTELVYHQYIICDSKCQECGEWQNGDYLEDQ |
Ga0209404_103289734 | 3300027906 | Marine | MIKEKCKFCNSIALVYNYSLCDSKCEECSEWQEGEEIK |
Ga0183683_100005660 | 3300029309 | Marine | MEETKCKFCGSTELVYHQYTICDSSCQECGEWQDGEYIK |
Ga0307378_101047505 | 3300031566 | Soil | MNEEKCKFCNDTALVYNSYICDSKCEECGEWQEGESYE |
Ga0308014_11112013 | 3300031628 | Marine | MNKCKFCGSKELTYHQYVIMDYSCDECGEWQNGDYINE |
Ga0315328_107602671 | 3300031757 | Seawater | MSKCKFCGSTELVYHQYIICDSKCQECGEWQNGDYLEDQD |
Ga0348335_028846_2376_2483 | 3300034374 | Aqueous | SECKFCGSTELVYHQYVIRDSSCQDCGEWQNGETI |
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