Metagenome Family F092841

Overview

Basic Information

• Family ID: F092841
• Family Type: Metagenome
• Number of Sequences: 107
• Average Sequence Length: 51 residues
• Representative Sequence: MYTRVNKNPSARNFLSPKPEVTCGTVAIIIRVVLLSPYLRIRAVSLS
• Number of Associated Samples: 11
• Number of Associated Scaffolds: 107

Quality Assessment

• Transcriptomic Evidence: No
• Most common taxonomic group: Unclassified
• % of genes with valid RBS motifs: 0.00 %
• % of genes near scaffold ends (potentially truncated): 1.87 %
• % of genes from short scaffolds (< 2000 bps): 1.87 %
• Associated GOLD sequencing projects: 7
• AlphaFold2 3D model prediction: No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Unclassified (100.000 % of family members)
• NCBI Taxonomy ID: N/A
• Taxonomy: N/A

Most Common Ecosystem

• GOLD Ecosystem: Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut (100.000 % of family members)
• Environment Ontology (ENVO): Unclassified (100.000 % of family members)
• Earth Microbiome Project Ontology (EMPO): Host-associated → Animal → Animal proximal gut (100.000 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Transmembrane (alpha-helical)
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 0.00%
  β-sheet: 36.17%
  Coil/Unstructured: 63.83%

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF09258	Glyco_transf_64	2.80
PF01055	Glyco_hydro_31	0.93
PF00067	p450	0.93
PF00179	UQ_con	0.93
PF00439	Bromodomain	0.93

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG1501	Alpha-glucosidase/xylosidase, GH31 family	Carbohydrate transport and metabolism [G]	0.93
COG2124	Cytochrome P450	Defense mechanisms [V]	0.93
COG5078	Ubiquitin-protein ligase	Posttranslational modification, protein turnover, chaperones [O]	0.93

Phylogeny

NCBI Taxonomy

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

Associated Scaffolds

Scaffold	Taxonomy	Length
3300001544|JGI20163J15578_10562590	Not Available	701
3300002175|JGI20166J26741_12019681	Not Available	747

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	100.00%

Class

Habitat	Taxonomy	Distribution
Arthropoda	Host-Associated → Arthropoda	100.00%

Category

Habitat	Taxonomy	Distribution
Digestive System	Host-Associated → Arthropoda → Digestive System	100.00%

Type

Habitat	Taxonomy	Distribution
Gut	Host-Associated → Arthropoda → Digestive System → Gut	100.00%

Subtype

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	100.00%

Habitat

Habitat	Taxonomy	Distribution
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	100.00%

Associated Samples

Taxon OID	Sample Name	Habitat Type
3300001544	Cubitermes ugandensis P1 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P1	Host-Associated
3300002125	Cubitermes ugandensis P4 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P4	Host-Associated
3300002127	Cubitermes ugandensis P3 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P3	Host-Associated
3300002175	Cubitermes ugandensis P5 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P5	Host-Associated
3300002185	Cubitermes ugandensis P1 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P1	Host-Associated
3300009826	Embiratermes neotenicus P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P1	Host-Associated
3300027558	Cubitermes ugandensis crop segment gut microbial communities from Kakamega Forest, Kenya - Cu122C (SPAdes)	Host-Associated
3300027891	Cubitermes ugandensis P4 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P4 (SPAdes)	Host-Associated
3300027904	Cubitermes ugandensis P3 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P3 (SPAdes)	Host-Associated
3300027960	Cubitermes ugandensis midgut segment microbial communities from Kakamega Forest, Kenya - Cu122M (SPAdes)	Host-Associated
3300027984	Cubitermes ugandensis P5 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P5 (SPAdes)	Host-Associated

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI20163J15578_100182011	3300001544	Termite Gut	MQLDMYTRVNKNPSARNFLSPKPEVTCGTVAIKIRVVLLSPYLR
JGI20163J15578_101303893	3300001544	Termite Gut	MYTRVNKNPSARNFLSPKPEVTCGTVDIIIRVVLLSPYLRI
JGI20163J15578_101433651	3300001544	Termite Gut	MTIVCICWLQLYTRVHKNSSA*NFLSPKPEVMCGTVAIIIRVILFSPYLRIRAVSLSSIH
JGI20163J15578_102971871	3300001544	Termite Gut	MASWYTLSNKNPSARNFLSPEPDVTCGAVAIIIRVVLFSPYLRIGGVSLSSIHYN
JGI20163J15578_105240631	3300001544	Termite Gut	MYTRVNKNPSA*NFLSPKPVMKCGTVAIIIRVVLLSPYLRIRAVSLSSIHSN
JGI20163J15578_105420511	3300001544	Termite Gut	MVYTRVNKNPSALNFLSPKPEVTCGTVAIIIRVVLLSPYLRIR
JGI20163J15578_105625901	3300001544	Termite Gut	MYTRVNKNPSASNFLSPKPEVTCGTVAVIIRVVLLSPYLRIRAV
JGI20163J15578_106476321	3300001544	Termite Gut	MYTRVNKNPSARNFLSPKPEVTCGTVAIIIRVVLLSPYLRIRAV
JGI20163J15578_106641512	3300001544	Termite Gut	MYTRVNKNPSAQNFLSPKPEVTCGTVAIIIRVVLLSPYLRIR
JGI20165J26630_102871902	3300002125	Termite Gut	MYTRVNKNPSAPNFLNPKPEVTCGTVAIIIRVVLLSPYLRIRAVSL
JGI20165J26630_105386681	3300002125	Termite Gut	MNIFYLICNYTYTRVNKNPSA*NFLSPKPEVTCGTVAIIIRVVLFSPYLRIRAVSLSSIH
JGI20164J26629_101841762	3300002127	Termite Gut	MYALSNKNPLARNVLSPEPEVTCGTVAIIIRVVLLSPHLRIR
JGI20166J26741_100098301	3300002175	Termite Gut	MYTRVKKNPSA*NFLSPKPEVTCGTIDIIIRVVLLSPYLRIRAVSLSSIHHNQSHRVYIN
JGI20166J26741_101318621	3300002175	Termite Gut	MFVYTRVNKNPSARNFLSPKPEVTCGTAAIIIRVVLLSQYLRIRAVSLSSIH
JGI20166J26741_101620531	3300002175	Termite Gut	MYTRVNKNPSASEVTCGTVAIIIRVVLLSPYLRIRAVFLSSIHYNQS
JGI20166J26741_114924911	3300002175	Termite Gut	LYTRVNKNPSALNFLSYKPEVTCGTVAIIIRVVLLSPYLRIRAVSLSSIH
JGI20166J26741_114996409	3300002175	Termite Gut	MYILSNKNPSARNFLSPKPEVTCGTVAIIIRVVLLVLSPYLRIRGVSLSSIHCNQSHRVY
JGI20166J26741_115357042	3300002175	Termite Gut	MVYMYIVTNTTILYTRVNKNPSV*NFLSPKPEVT*GTVAIIIRVVLLSPYLRIRAFSLSSIHYNQSHR
JGI20166J26741_115619542	3300002175	Termite Gut	MYTRVNKNPSA*NFLSPKPVMKCGTVAIIIRVVLLSPYLRIRAVSLSSIHSNQSH
JGI20166J26741_115819202	3300002175	Termite Gut	VNVYIRVNINPSAWNFLSPKPEVTCGTVAIIIRVVLLSPYLR
JGI20166J26741_117153673	3300002175	Termite Gut	VVILRYTRVNKNPSVRNFLSPKPEVACGTVAIIIRVVLLSPYLRIRAVS
JGI20166J26741_117178623	3300002175	Termite Gut	MYISCDALYTRVNKNPLASNFLSPKPEVTCGTVAIIIRAVLLPPYLRIRAVS
JGI20166J26741_117741941	3300002175	Termite Gut	MLKCFFSLSLYTRVNKNPSALNFLSPKPEVTCGRVAIIIRVVLLSPYLRIRAVS
JGI20166J26741_119212211	3300002175	Termite Gut	MYTRVNKNPSASNFLNPKPEVTCGTVAIIIRVVLLTPYLRIRAVSLSSI
JGI20166J26741_119510511	3300002175	Termite Gut	MYTRVNKNPSARNFLSPKPEVTCGTVDIIIRVVLLSPYLRIRAV
JGI20166J26741_119541982	3300002175	Termite Gut	MYTRINKNPSA*NFLSPKPEVTRGTVAIVIRVVLLSPYLRIRAVSLSSIHYNQSHRVYI
JGI20166J26741_120196811	3300002175	Termite Gut	MYTRVNKNPSASNFLSPKPEVTCGTVAVIIRVVLLSPYLRIRAVS
JGI20166J26741_121001631	3300002175	Termite Gut	MYTRVNKNPSA*NSLSPKPEVTCGTVAIIIRVVLLSPYLRIRAVSLS
JGI20166J26741_121474516	3300002175	Termite Gut	MTQGERAEEKLYTRVNKNPLA*NFLSPKPEVTCGTVAIII*VVLLSPYLRIRAVSLS
JGI20166J26741_121657021	3300002175	Termite Gut	MYTRVNKNPSALNFLNPKPEVTCGTVAIIIRVVLLSPYLRIRAVS
JGI20166J26741_122118772	3300002175	Termite Gut	MYTRVNKNPSAQNFLSPKPEVTCGTVAIIIRVVLLSPYLRIRAV
JGI20163J26743_104945801	3300002185	Termite Gut	VRRVDMYTRVNKNPSAWNFLSLKPEVTCGTVAIIIRVVLLSPYLRIRAVSLSSIH
JGI20163J26743_106091871	3300002185	Termite Gut	MYTRVNKPEVTCGTVAIIIRVVLLPPYLRIRAVSLSSIH
JGI20163J26743_106662522	3300002185	Termite Gut	MYTPVNKNPSALNVLSPKPDVPCGTVGIIIRVVLLSPYLRIRAVSLSSIHYNQ
JGI20163J26743_107001982	3300002185	Termite Gut	MYTRVNKNPSAQNFLSPKPEVTCGTVAIIIRVVLLSPYLRIRAVS
JGI20163J26743_107828233	3300002185	Termite Gut	MYTRINKNPSA*NFLSPKPEVTRGTVAIVIRVVLLSPYLRI
JGI20163J26743_107873201	3300002185	Termite Gut	MTYNRVNKNFLSPKPEVTCGTVTIIIRVVLLSSYLRIRAVSLSSIHYN
JGI20163J26743_108956611	3300002185	Termite Gut	MYTRVNKNPSACNFLSPKPEVTCGTVAIITRFVLLSPYL
JGI20163J26743_109860441	3300002185	Termite Gut	MVAFMYTRVNKNPSA*NFLSTKPEVTCGTVAIIIRVVLLSPYLRIRAVSLSSIH
JGI20163J26743_110220112	3300002185	Termite Gut	MYTRVNKKPSALNFLSPKPEVTCGTVAIIIRVVLLSPYLRI
JGI20163J26743_114149504	3300002185	Termite Gut	MYTRVNKNPSARNFLSPKPEVTCGTVDIIIRVVLLSPYLRIRAVS
JGI20163J26743_114203411	3300002185	Termite Gut	MYTRVNKNPSA*NFLSSKPEVTCGTVAIIIRVVLLSPYLRIRAVSLSSIHYNQSHRVY
Ga0123355_119312831	3300009826	Termite Gut	MYTQTNKNPSALYFVRPAQAVTYGTVAIIIRVVFLTPYLRIRGVSQSSINYN
Ga0209531_100009381	3300027558	Termite Gut	MYTRVNKNPLAXNFLSPKPEVTRGTVAIIIRVVLLSPYLRIRAVSLSSIHYNQSH
Ga0209531_100397031	3300027558	Termite Gut	MYTLSNKNPSAXNFLSPEPEVTCGTVAIIIRVVLLSPYLRIRG
Ga0209531_100958181	3300027558	Termite Gut	MFGRRYTRVNKNPSALNFLSPKPEVTCGTVAIIIRVVLLSPYLRIRAV
Ga0209531_101616541	3300027558	Termite Gut	MYTRVNKNPLAXNFLSPKPEMTCGTVAIIIRVILLSPYLRIRAI
Ga0209628_100343386	3300027891	Termite Gut	MQQHTYTRVNKNPSAXNFLSPKPEVTCGTVAIIIRVILPSPYLRIRAVSLSSIHYNQSHR
Ga0209628_100597501	3300027891	Termite Gut	MQLDMYTRVNKNPSARNFLSPKPEVTCGTVAIKIRVVLLSPYLRIRAV
Ga0209628_100736367	3300027891	Termite Gut	MYTRVNKNPSAXNFLSPKLEVTCGTVAIIIQVILLSPYLRIRAVSLS
Ga0209628_101419572	3300027891	Termite Gut	MYTRVNKNPSAXNSLSPKPEVTCGTVAIIIRVVLLSPYLRIRAVSLSS
Ga0209628_101470203	3300027891	Termite Gut	MRMYTRVNKNPSALNFLSPKPEVTCGTVAIIIRVV
Ga0209628_101836841	3300027891	Termite Gut	VRVCVGFVAYTRVNKNPSAWNFLSPKPEVTCGTVAIIIRVVLLSPY
Ga0209628_101898291	3300027891	Termite Gut	MEGKYTRVNKNPSAXNFLSPKPKVMCGTVAIIIRVVLLSPYLRIRAV
Ga0209628_102263431	3300027891	Termite Gut	MYTRVNKNPSAXNFLSPKLEVTCGTVAIIIQVVLLSPHLCIRAVFLSSIHYNQSRRI
Ga0209628_103042971	3300027891	Termite Gut	MYTRVNKNPSVWNFLSPKPEVTCGTVAIIIRVVLLSPYLRIRAVSLSPIHYNQ
Ga0209628_103128151	3300027891	Termite Gut	MYTRVNKNPSARNFLSPKPEVTCGTVDSIIRVVLLSPYLRIRAVSLSSIHYNQSHRVYIN
Ga0209628_103750571	3300027891	Termite Gut	MYTRVNKNPSAXNFLSPKTEVTCGTVAIIIRVVLLSPYLRIRAVSLSSIHYNQSHRVYIN
Ga0209628_104036981	3300027891	Termite Gut	MYALSNKNPLAWNFLSPEPEVTCGTVAIIIRVVLLSPYLRIRGVS
Ga0209628_104640681	3300027891	Termite Gut	MYTRVNKNPSAWNFLSPKPEMTCGTVAVIIRVVLLSPYLRIRAVS
Ga0209628_104921461	3300027891	Termite Gut	MFLHAGNSTTRDMSLWMYTRVNKSPKPEVMCGTVAIIIRVVLLSPYLRIHAISLSSIHYNQSH
Ga0209628_106324961	3300027891	Termite Gut	MFSEKDVGPLYTRVNKNPTAXNFQSPKPEVTXDTVAIIIRVVLLSPYLRIRAVSLSSIHYNQSRR
Ga0209628_106422221	3300027891	Termite Gut	MYSMYTRVNKNPSVXNFLSPKPELTCGTFAILIRVVLLSPYLRIRAVSLSSIHYNQSHRVYI
Ga0209628_107289691	3300027891	Termite Gut	MYTRVNKNPSACNFLSPKQEVTCGTFAIIIRVVLLSSYLRIRAVSLSSIHYNQSHRVYTEDDNTFA
Ga0209628_110287501	3300027891	Termite Gut	MKSHKHMYTLLNKNPSALNFLSLKPEVTCGTVAIIIRVVLLSPYLRIRVVS
Ga0209628_110494121	3300027891	Termite Gut	MYTRVNKNPLAXNFLSPKPEVTRGTVAIIIRVVLLSPYLRIRAVSLSSIHYNQSHRVYINRRRQ
Ga0209628_112326471	3300027891	Termite Gut	MYTRVNKNPSALNFLSPKPEVTCGTVAIIIRVVLLSPYLR
Ga0209628_113251801	3300027891	Termite Gut	MYTRVNKNPSALNFLNPKPEVTCGTVAIIIRVVLLSPYLRIRAVSPSSIHYNQS
Ga0209737_100347475	3300027904	Termite Gut	MYTRVNKNPSAXNFLSPKPEVTRGTVAIIIRVVLLSPYLRICAVSLSSIHYNQSHRVYIN
Ga0209737_101179813	3300027904	Termite Gut	MTIVCICWLQLYTRVHKNSSAXNFLSPKPEVMCGTVAIIIRVILFSPYLRIRAVSLSSIHYNQSH
Ga0209737_101192414	3300027904	Termite Gut	MYTRVNKNPSAGYFLSPKPEVTCGTVAIIIRVVLLSPYLRIRAVSLSSIHY
Ga0209737_101370363	3300027904	Termite Gut	MYTRVNKNPSALNFLSPKPEVTCGTVAIIIRVVLLSPYLRI
Ga0209737_101386811	3300027904	Termite Gut	MYTRVNKDPSAXNFLSPKPEVMCGTAAIIIRVVLLSPYLRIRAISLSSI
Ga0209737_101747601	3300027904	Termite Gut	MQLDMYTRVNKNPSARNFLSPKPEVTCGTVAIKIRVVLLSPYLRIRAVSLSFIHYNQSH
Ga0209737_104081642	3300027904	Termite Gut	MYMYTRLNKNPSARNFLSPKPEVTCSSVAIIIQVVLLSPYLRISAISLSSIHYNQSHRV
Ga0209737_104329351	3300027904	Termite Gut	MYTRVNKNPSAWNFLSPKPEMTCGTVAIIIRVVLL
Ga0209737_104826462	3300027904	Termite Gut	MYTRVNKNPSALNFLSPKPEVTCGTVAIIIRVVLLSQYLRIRAVSLSSIHYNQSHRVYIN
Ga0209737_106634452	3300027904	Termite Gut	MTDVIKAKDMYTLSNKNPSAXNFLSPEPEVSCGTVAIIIRVVLLSPYLRIRGV
Ga0209737_106846281	3300027904	Termite Gut	MFSEKDVGPLYTRVNKNPTAXNFQSPKPEVTXDTVAIIIRVVLLSPYLRIRAVSLSSI
Ga0209737_108370831	3300027904	Termite Gut	MGRYTHVNKNPSAXNFLNPKPEVMCGTVAIITRVVLLSPYLRIRAVSLSCIHYSQSHR
Ga0209737_108641421	3300027904	Termite Gut	VSNFVLYTRVNKNPLACNFLSPKPEVMCGTVAIIIRVVLLSPYLRIR
Ga0209737_111319591	3300027904	Termite Gut	MLKTRKGDVRRVDMYTRVNKNPSAWNFLSLKPEVTCGTVAIIIRVVLLSPYLRI
Ga0209737_111390782	3300027904	Termite Gut	MFWTVKVYTRVNKNPSACNFLSPKPEVMCGTVAIIIRVVLLSPYLRIR
Ga0209737_111535911	3300027904	Termite Gut	MYTRVNKNPSACNFLSPKPQVTCGTVAIIIRVVLLSPYLRIRAVSLSSIHYNKSHRVYI
Ga0209737_112895081	3300027904	Termite Gut	MYTRVNKNPSALNFLNPKPEVTCGTVAIIIRVVLLSPYLRIRAVSPSSIHYNQ
Ga0209627_10701471	3300027960	Termite Gut	MYTLSNKNPSARNFLSPEPEVTCGTVAIIIRVVLLSPYLLIRGVSLSSIHYNQSHRVFIN
Ga0209629_100656404	3300027984	Termite Gut	MYTRANKNPSAXNFLSPKPEVMYGTVAIIIRVVLLSPYLRIR
Ga0209629_102217241	3300027984	Termite Gut	MYTLSNKNPTARHFLSPEPEVTCGTVAIIIRVVLISPYLRIRGV
Ga0209629_102374002	3300027984	Termite Gut	MYTRVNKKPSALNFLSPKPEVTCGTVAIIIRVVLLSPYLRIRAV
Ga0209629_102782761	3300027984	Termite Gut	MYTRVNKNPSARNFLSPKPEVTCGTVDIIIRVVLLSPYLRIRAVSLSSIHY
Ga0209629_102868261	3300027984	Termite Gut	MYTRVNKNPSAXNFLSSKPEVTCGTVAIIIRVVLLSPYLRIRAVSLSSIHYN
Ga0209629_103205681	3300027984	Termite Gut	MYTRVNKNPSAXNFLSPKPEVSCGTVAIIIRVVLLSPYLRI
Ga0209629_103374102	3300027984	Termite Gut	VYTRVNKNPSACNFLSPKPEVTCGTVAIIIRVVLLSPYLRIRAVSLSSIHY
Ga0209629_104285451	3300027984	Termite Gut	VVILRYTRVNKNPSVRNFLSPKPEVACGTVAIIIRVVLLSPYLRIRAV
Ga0209629_105208371	3300027984	Termite Gut	VKKIKTQFFVYTRVNKNPSAFNFLSPKPEVTCGTVAIIIRVVLLSPYLRIRAV
Ga0209629_105359461	3300027984	Termite Gut	MLSWEKNRYTHVNENPSAXNFLSPKPEVTCGTVAIIIRVVLLSPYL
Ga0209629_105535211	3300027984	Termite Gut	MMYTRVNKNPSARNFLSPKPEMTCGTVAIIIRVVLLSPYLRIRAVSLSSIHYNQ
Ga0209629_105665112	3300027984	Termite Gut	MFWTVKVYTRVNKNPSACNFLSPKPEVMCGTVAIIIRVVLLSPYLRIRAVSLSPIHYN
Ga0209629_105671841	3300027984	Termite Gut	VSNFVLYTRVNKNPLACNFLSPKPEVMCGTVAIIIRVVLLSPYLRIRAVSLSPIHYN
Ga0209629_105867011	3300027984	Termite Gut	MYTRVNKNPSAXNFLSPKPEMTCSTVAIIIRVVLLSPYLRIRAVSLSSIYYN
Ga0209629_106118161	3300027984	Termite Gut	VRVCVGFVAYTRVNKNPSAWNFLSPKPEVTCGTVAIIIRVVLLSPYLRIRAVSLSSIHYNQS
Ga0209629_106721381	3300027984	Termite Gut	MDLISAAGVYTRVNKNPSAXNFLSPKPEVMCGTVAIIIRVVLLSPYLRIRAVSLS
Ga0209629_106808551	3300027984	Termite Gut	MYTRVNKNPLAXNFLSPKPEVTCSTVAIIIRVILLSPYLRIRAVSLSSIHYNQSHRIYIN
Ga0209629_106898991	3300027984	Termite Gut	MYTRINKNPSAXNFLSPKPEVTRGTVAIVIRVVLLSPYLRIRAVSLSSIHYNQSHRVY
Ga0209629_108183791	3300027984	Termite Gut	MYTRVNKNPSARNFLSPKPEVTCGTVAIIIRVVLLSPYLRIRAVSLS
Ga0209629_108269151	3300027984	Termite Gut	MYTRVNKNPLAXNFLSPKPEVTRGTVAIIIRVVLLSPYLRIRAVSLS
Ga0209629_109627931	3300027984	Termite Gut	MFIVYTRVNKSPSARNFLSPKPEVTCGTVAIIIRVVLLSPYLRIRA