Metagenome / Metatranscriptome Family F092837

Basic Information
Family ID	F092837
Family Type	Metagenome / Metatranscriptome
Number of Sequences	107
Average Sequence Length	46 residues
Representative Sequence	QETVGQIRNYMDGARSALKEGDVLRANTLAVKAHLLSEDLVKH
Number of Associated Samples	99
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.95 %
% of genes near scaffold ends (potentially truncated)	97.20 %
% of genes from short scaffolds (< 2000 bps)	86.92 %
Associated GOLD sequencing projects	92
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.72

Most Common Taxonomy
Group	Bacteria (93.458 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland (13.084 % of family members)
Environment Ontology (ENVO)	Unclassified (38.318 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (40.187 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 53.52% β-sheet: 0.00% Coil/Unstructured: 46.48%
Feature Viewer

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SCOP family	SCOP domain	Representative PDB	TM-score
a.102.1.9: Trehalase-like	d2jg0a_	2jg0	0.95175
a.24.19.0: automated matches	d5mawe_	5maw	0.92834
a.8.11.1: AF1782-like	d2oo2a1	2oo2	0.92749
f.25.1.1: Cytochrome c oxidase subunit III-like	d7cohc_	7coh	0.92703
a.118.8.0: automated matches	d6kp3a_	6kp3	0.92459

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF13578	Methyltransf_24	20.56
PF01850	PIN	14.95
PF00483	NTP_transferase	9.35
PF02604	PhdYeFM_antitox	2.80
PF03720	UDPG_MGDP_dh_C	1.87
PF13181	TPR_8	1.87
PF03743	TrbI	0.93
PF04073	tRNA_edit	0.93
PF02698	DUF218	0.93
PF02823	ATP-synt_DE_N	0.93
PF01596	Methyltransf_3	0.93
PF13424	TPR_12	0.93
PF02515	CoA_transf_3	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG2161	Antitoxin component YafN of the YafNO toxin-antitoxin module, PHD/YefM family	Defense mechanisms [V]	2.80
COG4118	Antitoxin component of toxin-antitoxin stability system, DNA-binding transcriptional repressor	Defense mechanisms [V]	2.80
COG0355	FoF1-type ATP synthase, epsilon subunit	Energy production and conversion [C]	0.93
COG1434	Lipid carrier protein ElyC involved in cell wall biogenesis, DUF218 family	Cell wall/membrane/envelope biogenesis [M]	0.93
COG1804	Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases	Lipid transport and metabolism [I]	0.93
COG2518	Protein-L-isoaspartate O-methyltransferase	Posttranslational modification, protein turnover, chaperones [O]	0.93
COG2948	Type IV secretory pathway, VirB10 component	Intracellular trafficking, secretion, and vesicular transport [U]	0.93
COG2949	Uncharacterized periplasmic protein SanA, affects membrane permeability for vancomycin	Cell wall/membrane/envelope biogenesis [M]	0.93
COG4122	tRNA 5-hydroxyU34 O-methylase TrmR/YrrM	Translation, ribosomal structure and biogenesis [J]	0.93
COG4123	tRNA1(Val) A37 N6-methylase TrmN6	Translation, ribosomal structure and biogenesis [J]	0.93

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	93.46 %
Unclassified	root	N/A	6.54 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	93.46 %
Unclassified	root	N/A	6.54 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	93.46 %
Unclassified	root	N/A	6.54 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	71.96 %
Unclassified	root	N/A	6.54 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	14.02 %
Unclassified	root	N/A	6.54 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.87 %

Name	Rank	Taxonomy	Distribution
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	12.15 %
Unclassified	root	N/A	6.54 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.87 %
Candidatus Angelobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter	1.87 %

Name	Rank	Taxonomy	Distribution
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	12.15 %
Unclassified	root	N/A	6.54 %
unclassified Candidatus Angelobacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter	1.87 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	6.54 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	2.80 %
Candidatus Angelobacter sp. Gp1-AA117	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	1.87 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.87 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2189573001\|GZR05M101CJJP8	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300001593\|JGI12635J15846_10391226	All Organisms → cellular organisms → Bacteria → Acidobacteria	841	Open in IMG/M
3300001593\|JGI12635J15846_10395284	All Organisms → cellular organisms → Bacteria	836	Open in IMG/M
3300002910\|JGI25615J43890_1026601	All Organisms → cellular organisms → Bacteria	955	Open in IMG/M
3300003505\|JGIcombinedJ51221_10216910	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	777	Open in IMG/M
3300004080\|Ga0062385_11207867	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	517	Open in IMG/M
3300004091\|Ga0062387_101380142	All Organisms → cellular organisms → Bacteria	560	Open in IMG/M
3300004092\|Ga0062389_100337251	All Organisms → cellular organisms → Bacteria	1597	Open in IMG/M
3300004635\|Ga0062388_101951551	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	606	Open in IMG/M
3300005995\|Ga0066790_10007211	All Organisms → cellular organisms → Bacteria	4933	Open in IMG/M
3300006052\|Ga0075029_100233563	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	1157	Open in IMG/M
3300006059\|Ga0075017_100697600	All Organisms → cellular organisms → Bacteria	780	Open in IMG/M
3300006162\|Ga0075030_100382710	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	1121	Open in IMG/M
3300009029\|Ga0066793_10244925	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	1040	Open in IMG/M
3300009088\|Ga0099830_10589453	All Organisms → cellular organisms → Bacteria → Acidobacteria	911	Open in IMG/M
3300009143\|Ga0099792_10977327	All Organisms → cellular organisms → Bacteria → Acidobacteria	564	Open in IMG/M
3300009519\|Ga0116108_1017210	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2541	Open in IMG/M
3300009521\|Ga0116222_1465613	All Organisms → cellular organisms → Bacteria → Acidobacteria	552	Open in IMG/M
3300009521\|Ga0116222_1480886	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300009522\|Ga0116218_1152917	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1047	Open in IMG/M
3300009552\|Ga0116138_1014768	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	2515	Open in IMG/M
3300009631\|Ga0116115_1011654	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2673	Open in IMG/M
3300009634\|Ga0116124_1097438	All Organisms → cellular organisms → Bacteria → Acidobacteria	833	Open in IMG/M
3300009635\|Ga0116117_1101442	All Organisms → cellular organisms → Bacteria → Acidobacteria	721	Open in IMG/M
3300009639\|Ga0116122_1066040	All Organisms → cellular organisms → Bacteria	1203	Open in IMG/M
3300009643\|Ga0116110_1082126	All Organisms → cellular organisms → Bacteria → Acidobacteria	1112	Open in IMG/M
3300009644\|Ga0116121_1056884	All Organisms → cellular organisms → Bacteria → Acidobacteria	1226	Open in IMG/M
3300010341\|Ga0074045_10288829	All Organisms → cellular organisms → Bacteria	1077	Open in IMG/M
3300010379\|Ga0136449_102703786	All Organisms → cellular organisms → Bacteria → Acidobacteria	704	Open in IMG/M
3300010379\|Ga0136449_103079048	Not Available	648	Open in IMG/M
3300010379\|Ga0136449_104583538	All Organisms → cellular organisms → Bacteria → Acidobacteria	507	Open in IMG/M
3300011270\|Ga0137391_11435993	All Organisms → cellular organisms → Bacteria → Acidobacteria	536	Open in IMG/M
3300012205\|Ga0137362_10707439	All Organisms → cellular organisms → Bacteria → Acidobacteria	866	Open in IMG/M
3300012362\|Ga0137361_11409944	All Organisms → cellular organisms → Bacteria → Acidobacteria	620	Open in IMG/M
3300012582\|Ga0137358_10151950	All Organisms → cellular organisms → Bacteria → Acidobacteria	1577	Open in IMG/M
3300012924\|Ga0137413_10144642	All Organisms → cellular organisms → Bacteria	1545	Open in IMG/M
3300012925\|Ga0137419_10482299	All Organisms → cellular organisms → Bacteria	982	Open in IMG/M
3300012925\|Ga0137419_10989495	All Organisms → cellular organisms → Bacteria → Acidobacteria	696	Open in IMG/M
3300014155\|Ga0181524_10210040	All Organisms → cellular organisms → Bacteria → Acidobacteria	945	Open in IMG/M
3300014158\|Ga0181521_10156654	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	1300	Open in IMG/M
3300014162\|Ga0181538_10741720	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300014494\|Ga0182017_10447173	All Organisms → cellular organisms → Bacteria → Acidobacteria	796	Open in IMG/M
3300014496\|Ga0182011_10160617	All Organisms → cellular organisms → Bacteria	1546	Open in IMG/M
3300014638\|Ga0181536_10209796	All Organisms → cellular organisms → Bacteria → Acidobacteria	962	Open in IMG/M
3300016730\|Ga0181515_1442428	Not Available	1243	Open in IMG/M
3300016750\|Ga0181505_10468944	All Organisms → cellular organisms → Bacteria → Acidobacteria	589	Open in IMG/M
3300017931\|Ga0187877_1344881	All Organisms → cellular organisms → Bacteria → Acidobacteria	566	Open in IMG/M
3300017933\|Ga0187801_10030325	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1894	Open in IMG/M
3300017941\|Ga0187850_10463018	Not Available	550	Open in IMG/M
3300018006\|Ga0187804_10003107	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5112	Open in IMG/M
3300018012\|Ga0187810_10320839	All Organisms → cellular organisms → Bacteria → Acidobacteria	643	Open in IMG/M
3300018014\|Ga0187860_1221883	All Organisms → cellular organisms → Bacteria → Acidobacteria	763	Open in IMG/M
3300018016\|Ga0187880_1059220	All Organisms → cellular organisms → Bacteria → Acidobacteria	2009	Open in IMG/M
3300018019\|Ga0187874_10455042	All Organisms → cellular organisms → Bacteria → Acidobacteria	515	Open in IMG/M
3300018020\|Ga0187861_10451809	All Organisms → cellular organisms → Bacteria → Acidobacteria	534	Open in IMG/M
3300018034\|Ga0187863_10309036	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	879	Open in IMG/M
3300018035\|Ga0187875_10060692	All Organisms → cellular organisms → Bacteria → Acidobacteria	2189	Open in IMG/M
3300018035\|Ga0187875_10575880	All Organisms → cellular organisms → Bacteria → Acidobacteria	595	Open in IMG/M
3300018046\|Ga0187851_10049200	All Organisms → cellular organisms → Bacteria	2762	Open in IMG/M
3300018057\|Ga0187858_10366291	All Organisms → cellular organisms → Bacteria	901	Open in IMG/M
3300018057\|Ga0187858_10402070	All Organisms → cellular organisms → Bacteria → Acidobacteria	851	Open in IMG/M
3300019787\|Ga0182031_1381146	All Organisms → cellular organisms → Bacteria	2000	Open in IMG/M
3300020199\|Ga0179592_10409373	All Organisms → cellular organisms → Bacteria → Acidobacteria	591	Open in IMG/M
3300020579\|Ga0210407_10133222	All Organisms → cellular organisms → Bacteria → Acidobacteria	1907	Open in IMG/M
3300021168\|Ga0210406_10471385	All Organisms → cellular organisms → Bacteria → Acidobacteria	996	Open in IMG/M
3300021170\|Ga0210400_11165612	All Organisms → cellular organisms → Bacteria → Acidobacteria	622	Open in IMG/M
3300021171\|Ga0210405_10831484	All Organisms → cellular organisms → Bacteria → Acidobacteria	706	Open in IMG/M
3300021474\|Ga0210390_11281715	All Organisms → cellular organisms → Bacteria → Acidobacteria	588	Open in IMG/M
3300021478\|Ga0210402_10588760	All Organisms → cellular organisms → Bacteria → Acidobacteria	1031	Open in IMG/M
3300022532\|Ga0242655_10261819	All Organisms → cellular organisms → Bacteria → Acidobacteria	551	Open in IMG/M
3300022873\|Ga0224550_1034543	Not Available	720	Open in IMG/M
3300025406\|Ga0208035_1014089	All Organisms → cellular organisms → Bacteria	1298	Open in IMG/M
3300025448\|Ga0208037_1016464	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1842	Open in IMG/M
3300025453\|Ga0208455_1008853	All Organisms → cellular organisms → Bacteria	2571	Open in IMG/M
3300025480\|Ga0208688_1027392	All Organisms → cellular organisms → Bacteria	1393	Open in IMG/M
3300025507\|Ga0208188_1109956	All Organisms → cellular organisms → Bacteria → Acidobacteria	613	Open in IMG/M
3300026499\|Ga0257181_1043761	All Organisms → cellular organisms → Bacteria → Acidobacteria	732	Open in IMG/M
3300026557\|Ga0179587_10761692	All Organisms → cellular organisms → Bacteria → Acidobacteria	638	Open in IMG/M
3300027297\|Ga0208241_1056277	All Organisms → cellular organisms → Bacteria → Acidobacteria	626	Open in IMG/M
3300027583\|Ga0209527_1119953	All Organisms → cellular organisms → Bacteria → Acidobacteria	587	Open in IMG/M
3300027591\|Ga0209733_1017190	All Organisms → cellular organisms → Bacteria → Acidobacteria	1941	Open in IMG/M
3300027604\|Ga0208324_1183588	All Organisms → cellular organisms → Bacteria → Acidobacteria	560	Open in IMG/M
3300027616\|Ga0209106_1103322	All Organisms → cellular organisms → Bacteria → Acidobacteria	639	Open in IMG/M
3300027783\|Ga0209448_10248233	All Organisms → cellular organisms → Bacteria → Acidobacteria	587	Open in IMG/M
3300027803\|Ga0209910_10028962	All Organisms → cellular organisms → Bacteria → Acidobacteria	584	Open in IMG/M
3300027812\|Ga0209656_10159092	All Organisms → cellular organisms → Bacteria → Acidobacteria	1125	Open in IMG/M
3300027894\|Ga0209068_10273496	All Organisms → cellular organisms → Bacteria → Acidobacteria	943	Open in IMG/M
3300027908\|Ga0209006_10423388	All Organisms → cellular organisms → Bacteria → Acidobacteria	1119	Open in IMG/M
3300027911\|Ga0209698_10207345	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1582	Open in IMG/M
3300029903\|Ga0247271_128652	All Organisms → cellular organisms → Bacteria → Acidobacteria	584	Open in IMG/M
3300029985\|Ga0302280_1051134	All Organisms → cellular organisms → Bacteria → Acidobacteria	1736	Open in IMG/M
3300029995\|Ga0302210_10094285	All Organisms → cellular organisms → Bacteria	840	Open in IMG/M
3300030019\|Ga0311348_10857059	All Organisms → cellular organisms → Bacteria → Acidobacteria	677	Open in IMG/M
3300030049\|Ga0302191_10099701	All Organisms → cellular organisms → Bacteria → Acidobacteria	1171	Open in IMG/M
3300030058\|Ga0302179_10017009	All Organisms → cellular organisms → Bacteria → Acidobacteria	3593	Open in IMG/M
3300030503\|Ga0311370_11558355	All Organisms → cellular organisms → Bacteria → Acidobacteria	687	Open in IMG/M
3300030520\|Ga0311372_12597123	All Organisms → cellular organisms → Bacteria → Acidobacteria	565	Open in IMG/M
3300030659\|Ga0316363_10165475	All Organisms → cellular organisms → Bacteria → Acidobacteria	940	Open in IMG/M
3300030659\|Ga0316363_10322790	All Organisms → cellular organisms → Bacteria → Acidobacteria	613	Open in IMG/M
3300031823\|Ga0307478_11508077	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300032174\|Ga0307470_11041754	All Organisms → cellular organisms → Bacteria → Acidobacteria	654	Open in IMG/M
3300032805\|Ga0335078_11426126	All Organisms → cellular organisms → Bacteria → Acidobacteria	780	Open in IMG/M
3300032829\|Ga0335070_10844867	Not Available	850	Open in IMG/M
3300033402\|Ga0326728_10033296	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8518	Open in IMG/M
3300033983\|Ga0371488_0119073	All Organisms → cellular organisms → Bacteria	1430	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	57.01%
Aquatic	Environmental → Aquatic	42.99%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	47.66%
Freshwater	Environmental → Aquatic → Freshwater	38.32%
Peat	Environmental → Terrestrial → Peat	9.35%
Sediment	Environmental → Aquatic → Sediment	4.67%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	38.32%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	31.78%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	9.35%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	8.41%
Loam	Environmental → Terrestrial → Soil → Loam	7.48%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.67%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	22.43%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.56%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	12.15%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	9.35%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	9.35%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.48%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	5.61%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.67%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.74%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.80%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.87%

Habitat	Taxonomy	Distribution
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	13.08%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	12.15%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	10.28%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	8.41%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.48%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	7.48%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	5.61%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	4.67%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	3.74%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.74%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	2.80%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	2.80%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.87%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.87%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	1.87%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.93%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.93%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.93%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.93%
Thawing Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Thawing Permafrost	0.93%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.93%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.93%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.93%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.93%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2189573001	Grass soil microbial communities from Rothamsted Park, UK - FD2 (NaCl 300g/L 5ml)	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002910	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300009029	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009519	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_150	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009552	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_150	Environmental	Open in IMG/M
3300009631	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_100	Environmental	Open in IMG/M
3300009634	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_150	Environmental	Open in IMG/M
3300009635	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_10	Environmental	Open in IMG/M
3300009639	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_40	Environmental	Open in IMG/M
3300009643	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_40	Environmental	Open in IMG/M
3300009644	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_10	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014155	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_60_metaG	Environmental	Open in IMG/M
3300014158	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaG	Environmental	Open in IMG/M
3300014162	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaG	Environmental	Open in IMG/M
3300014494	Permafrost microbial communities from Stordalen Mire, Sweden - 712E3D metaG	Environmental	Open in IMG/M
3300014496	Permafrost microbial communities from Stordalen Mire, Sweden - 711E1D metaG	Environmental	Open in IMG/M
3300014638	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_60_metaG	Environmental	Open in IMG/M
3300016730	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016750	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017931	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_100	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017941	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_150	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018012	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_5	Environmental	Open in IMG/M
3300018014	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_40	Environmental	Open in IMG/M
3300018016	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_40	Environmental	Open in IMG/M
3300018019	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_150	Environmental	Open in IMG/M
3300018020	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_100	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental	Open in IMG/M
3300018046	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300019787	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (PacBio error correction)	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300022532	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022873	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P3 10-14	Environmental	Open in IMG/M
3300025406	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_10 (SPAdes)	Environmental	Open in IMG/M
3300025448	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_100 (SPAdes)	Environmental	Open in IMG/M
3300025453	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_40 (SPAdes)	Environmental	Open in IMG/M
3300025480	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_150 (SPAdes)	Environmental	Open in IMG/M
3300025507	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_40 (SPAdes)	Environmental	Open in IMG/M
3300026499	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-B	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027297	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF047 (SPAdes)	Environmental	Open in IMG/M
3300027583	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027591	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M1 (SPAdes)	Environmental	Open in IMG/M
3300027604	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG (SPAdes)	Environmental	Open in IMG/M
3300027616	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M3 (SPAdes)	Environmental	Open in IMG/M
3300027783	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027803	Thawing permafrost microbial communities from the Arctic, studying carbon transformations - Permafrost 712S3S	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300029903	Soil microbial communities from Marcell Experimental Forest, Minnesota, USA - Fen703	Environmental	Open in IMG/M
3300029985	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_E1_1	Environmental	Open in IMG/M
3300029995	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_E3_2	Environmental	Open in IMG/M
3300030019	II_Fen_E2 coassembly	Environmental	Open in IMG/M
3300030049	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E3_1	Environmental	Open in IMG/M
3300030058	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_1	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030659	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG (v2)	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300033983	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB23AN SIP fraction	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FD2_07156560	2189573001	Grass Soil	APGDSTAPFDSQELETVSQIHNYMEGSRLALKQGDVSRAHTLAQKASLLTEDLASH
JGI12635J15846_103912263	3300001593	Forest Soil	NYMEGARSALKEGDVRRANTLAQKAHLLSEDLVKH*
JGI12635J15846_103952843	3300001593	Forest Soil	RNYMDGARSALKEGDVLRANTLAVKADLLSEDLVKH*
JGI25615J43890_10266011	3300002910	Grasslands Soil	QDKLKGLAGRAMDARKQETLEQIRNYMEGARSALKEGDVRRANTLAQKAHLLSDDLVKH*
JGIcombinedJ51221_102169102	3300003505	Forest Soil	LPAQRQETVAQIHNYMDGARAALQEGDVRRASTLAEKAHLLADELVRR*
Ga0062385_112078672	3300004080	Bog Forest Soil	QETIGQIRNYMDGARAALREGDLRRASTLAEKAHLLSEDLVTH*
Ga0062387_1013801421	3300004091	Bog Forest Soil	GQIRNYMDGARSALKEGDVRRANTLAEKAHLLADDLVKH*
Ga0062389_1003372514	3300004092	Bog Forest Soil	AGRTLDARQQETAGQIRNYMDGARSALKEGDLRRASTLAEKAHLLADDLVKH*
Ga0062388_1019515512	3300004635	Bog Forest Soil	LSAQQQETVEQIHNYMDGARSALKEGDVRRAGTLAEKAHLLTDDLVKH*
Ga0066686_108095162	3300005446	Soil	QQEMFVQIRHYIDGARSALKESDTQRAHTLALKAYLLSDDLVKH*
Ga0066790_100072113	3300005995	Soil	MRLKPLTGRTLDERQAETLGQIRNYMTGARSALQEGDVRRASTLAEKAHLLADDLIGR*
Ga0075029_1002335633	3300006052	Watersheds	LAARTLEEKRQETVGQIRNYMDHARLALKEGDLRRANTLAEKAHLLSDDLVKR*
Ga0075017_1006976001	3300006059	Watersheds	AHRQETVGQIRNYMEGARSALKEGDVRRASTLAQKAHLLAEDLVKH*
Ga0075030_1003827101	3300006162	Watersheds	NYMDHARLALKEGDLRRANTLAEKAHLLSDDLVRR*
Ga0066793_102449251	3300009029	Prmafrost Soil	TVGQIRNYMDGARSALKEGDVLRANTLAVKAHLLSEDLVKH*
Ga0099830_105894531	3300009088	Vadose Zone Soil	GRTLDAKQQEAVGQIRNYMEGARSALKEGDVRRANTLAQKAHLLSEDLVKH*
Ga0099792_109773271	3300009143	Vadose Zone Soil	DAKQRETVGQIRNYMDGARSALKEGDVRRANTLAQKAHLLSEDLVKH*
Ga0116108_10172101	3300009519	Peatland	QETVGQIRNYMDGARSALKEGDVLRANTLAVKAHLLSEDLVKH*
Ga0116222_14656132	3300009521	Peatlands Soil	LDAREQETAGQIRNYMVGARSALKEGDLRRASTLAEKAHLLAEDIVKR*
Ga0116222_14808862	3300009521	Peatlands Soil	KQLAGRTLDARQQETVGQIRNFMNGARSALKEGDTRRASTLAQKAHLLSEDLVKH*
Ga0116218_11529171	3300009522	Peatlands Soil	IRNYMGGARSALQEGDLWRANTLAQKAHLLADDLVKH*
Ga0116138_10147681	3300009552	Peatland	LKAQQQETVGQIRNYMDGARSALQEGDLRRASTLAEKAHLLADDLVKH*
Ga0116115_10116544	3300009631	Peatland	DARQQETVGQIRNYMDGARSALKEGDVLRANTLAVKAHLLSEDLVKH*
Ga0116124_10974382	3300009634	Peatland	GQIRNYMVGARSALQEGDLRRANTLAQKAHLLADDLVKH*
Ga0116117_11014421	3300009635	Peatland	ETVAQIRNYMNGARGALQDGDVSRANTLAEKAHLLADDLLRH*
Ga0116122_10660401	3300009639	Peatland	QIRNYMDGARSALKEGDVLRANTLAVKAHLLSEDLVKH*
Ga0116110_10821261	3300009643	Peatland	AQQQETVGQIRNYMVGARSALQEGDLRRANTLAQKAHLLADDLVKH*
Ga0116121_10568841	3300009644	Peatland	QQETVGQIRNYMVGARSALQEGDLWRANTLAQKSHLLADDLVKH*
Ga0074045_102888293	3300010341	Bog Forest Soil	RPLDPQRQETVEQIRNYMEGARSALKEGDVQRASTLAEKAHLLAEDLVKH*
Ga0136449_1027037863	3300010379	Peatlands Soil	YMGGARSALQEGDLWRANTLAQKAHLLADDLVKH*
Ga0136449_1030790481	3300010379	Peatlands Soil	VGQIRNYMGGARSALQEGDLWRANTLAQKAHLLADDLVKH*
Ga0136449_1045835381	3300010379	Peatlands Soil	RQQETVGQIRNYMGGARSALQEGDLWRANTLAQKAHLLADDLVKH*
Ga0137391_114359932	3300011270	Vadose Zone Soil	YMDGARSALKEGDLRRAGTLAEKAHMLSDDLVRH*
Ga0137362_107074391	3300012205	Vadose Zone Soil	GRPLDAKQQEAVAQIRSYMDGARSALKEGDVRRANTLAQKAHLLSEDLVKH*
Ga0137361_114099442	3300012362	Vadose Zone Soil	QIRSYMDGARSALKEGDVRRANTLAQKAHLLSEDLVKH*
Ga0137358_101519501	3300012582	Vadose Zone Soil	RLKRLTGQALDAPQQETVVQIRNYMDGARSALKDGDVRRANTLALKAHLLSKDLVKD*
Ga0137413_101446421	3300012924	Vadose Zone Soil	RQYMDGARSALKESDIQRAHTLALKAHLLSDDLVKH*
Ga0137419_104822991	3300012925	Vadose Zone Soil	KQQETVGQIRNYMEGARSALKEGDVRRANTLAQKAHLLSEDLVRH*
Ga0137419_109894951	3300012925	Vadose Zone Soil	QQEAVAQIRNYMDGARSALKEGDVRRANTLAQKAHLLSEDLVKH*
Ga0181524_102100401	3300014155	Bog	DQLKVLAARTLDVQQQETVGQIRNYMVGARSALQEGDLWRANTLAQKAHLLADDLVKH*
Ga0181521_101566544	3300014158	Bog	DARQQETVGQIRNYMDGARSALHEGDVRRASTLAQKAHLLAEDLAKH*
Ga0181538_107417202	3300014162	Bog	EGRSLDARQQEVAGQIRNYMDGARSALQEGDLRKASTLALKANLLAEDLLKH*
Ga0182017_104471733	3300014494	Fen	GRTLDAPQQETVGQIRNYMNGARLALQEGDVRRASTLAQKAHLLSEDLVKH*
Ga0182011_101606171	3300014496	Fen	YRNGARSALQEGDLLRAGTLAASAHWLADDLAKR*
Ga0181536_102097961	3300014638	Bog	TLDAQQQETVGQIRNYMVGARSALQEGDLRRANTLAQKAHLLADDLVKH*
Ga0181515_14424282	3300016730	Peatland	GDRLKQLAERTLDAQRQETVGQIRNYMEGARSALREGDVQRANTLAEKAHLLAEDLAKH
Ga0181505_104689443	3300016750	Peatland	AGRTLNTQQQETVGQIHNYMDGARSALKEGDVQRASTLAEKAHLLAEDLAKH
Ga0187818_102087571	3300017823	Freshwater Sediment	TVSQIHNYMEGARSALKEGDISRAHTLAMKAALLAEDLARH
Ga0187877_13448812	3300017931	Peatland	GRNLNPQQQETLGQIRNYMEGARGALQEGDVRRASTLAEKAHLLADDLLKH
Ga0187801_100303253	3300017933	Freshwater Sediment	LAERTLDARQQETVGQIRNYMEGARSALQEGDVRRANTLALKAHLLAADLVKH
Ga0187850_104630181	3300017941	Peatland	TVGQIRNYMVGARSALQEGDLWRANTLAQKAHLLADDLVKH
Ga0187804_100031071	3300018006	Freshwater Sediment	TRTLGARQQETVAQIHSYMRGASSALKEGDVRRANTLAQKAHLLAEDLVKH
Ga0187810_103208391	3300018012	Freshwater Sediment	GDQLKQLAERTLDARQQDTVGQIRNYMDGARAALKEGDVRRASTLAQKAHLLAEDLVKH
Ga0187860_12218833	3300018014	Peatland	VGRTLDAQQQETVGQVRNYMGGARSALQEGDVRRASTLAEKARLLAEDLVRH
Ga0187880_10592201	3300018016	Peatland	QETVGQIRNYMEGARSALREGDVQRANTLAEKAHLLAEDLAKH
Ga0187874_104550422	3300018019	Peatland	KQLAGRNLNPQQQETLGQIRNYMEGARGALQEGDVRRASTLAEKAHLLADDLLKH
Ga0187861_104518092	3300018020	Peatland	NYMDGARSALKEGDLRRAGTLAEKAHLLVDDLVTH
Ga0187863_103090361	3300018034	Peatland	QQETVGQIRNYMDGARGALREGDLRRASTLAEKAHLLSEDMVTH
Ga0187875_100606923	3300018035	Peatland	VGQIRNYMVGARSALQEGDLWRANTLAQKAHLLADDLVKH
Ga0187875_105758801	3300018035	Peatland	QIRNYMDGARSALREGDVRRASTLAQKAHLLAEDLVKH
Ga0187851_100492005	3300018046	Peatland	VGQIRNYMDGARGALREGDLRRASTLAEKAHLLSEDMVTH
Ga0187858_103662911	3300018057	Peatland	IRNYMDGARSALKEGDVLRANTLAVKAHLLSEDLVKH
Ga0187858_104020703	3300018057	Peatland	GRTLDARQQETVGQIRNYMVGARSALQEGDLRRANTLAQKAHLLADDLVKH
Ga0182031_13811466	3300019787	Bog	PGQIRNYMEGARGALQEGDVRRASTLAEKAHLLADDLLKH
Ga0179592_104093732	3300020199	Vadose Zone Soil	LKRLAGRTLDAKQQETVGQIRNYMEGARSALKEGDVRRANTLAQKAHLLSEDLVKH
Ga0210407_101332221	3300020579	Soil	DKLKRLTGRTLDAKQQETVGQIRNYMEGVRSALKEGDVRRANTLAQKAHLLSEDLVKH
Ga0210406_104713851	3300021168	Soil	GQIRNYMEGVRSALKEGDVRRANTLAQKAHLLSEDLVKH
Ga0210400_111656121	3300021170	Soil	ETIGQIRNYMQGARSALKEGDVRRAGTLAEKAQLLAEDLVKH
Ga0210405_108314843	3300021171	Soil	DAKQQETVGQIRNYMEGVRSALKEGDVRRANTLAQKAHLLSEDLVKH
Ga0210390_112817151	3300021474	Soil	QLKQVTERTLNAQQQETVGQIHNYMDGSRAALKEGDVRRARTLAQKAHLLAEDLVKH
Ga0210402_105887604	3300021478	Soil	KLKRLTGRTLDAKQQETVGQIRNYMEGVRSALKEGDVRRANTLAQKAHLLSEDLLKH
Ga0242655_102618191	3300022532	Soil	LDAKQQETVGQIRNYMEGVRSALKEGDVRRANTLAQKAHLLSEDLLKH
Ga0224550_10345432	3300022873	Soil	ADRTLDTQKRETVGQIRNYMDGARSALKEGDVRRASTLAQKAHLLSEDLLKH
Ga0208035_10140891	3300025406	Peatland	LKQLAGRNLNPQQQETLGQIRNYMEGARGALQEGDVRRASTLAEKAHLLADDLLKH
Ga0208037_10164641	3300025448	Peatland	IRNYMDGARSALQEGDLRRASTLAEKAHLLADDLVKH
Ga0208455_10088531	3300025453	Peatland	VGQVRNYMGGARSALQEGDVRRASTLAEKARLLAEDLVRH
Ga0208688_10273921	3300025480	Peatland	TLDARQQETVGQIRNYMDGARSALKEGDVLRANTLAVKAHLLSEDLVKH
Ga0208188_11099562	3300025507	Peatland	QQQETVGQIRNYMVGARSALQEGDLRRANTLAQKAHLLADDLVKH
Ga0257181_10437611	3300026499	Soil	LKRLAGLTLDAPQQETVGQIRNYMDGARSALKEGDVRRANTLALKAHLLSEDLVKD
Ga0179587_107616923	3300026557	Vadose Zone Soil	IRNYMDGARSALKEGDVRRANTLAQKAHLLSEDLVKH
Ga0208241_10562772	3300027297	Forest Soil	QQETIGQIRNYMQGARSALKEGDVRRAGTLAEKAQLLAEDLVKH
Ga0209527_11199531	3300027583	Forest Soil	VQQQDRVGQVRNYLVGARSALQEGDLRRAHTLALKAHLLSDDLIKH
Ga0209733_10171901	3300027591	Forest Soil	TVGQIRNYMEGVRSALKEGDVRRANTLAQKAHLLSEDLVKH
Ga0208324_11835882	3300027604	Peatlands Soil	NYMGGARSALQEGDLWRANTLAQKAHLLADDLVKH
Ga0209106_11033223	3300027616	Forest Soil	RTLDAKQQETVGQIRNYMEGARSALKEGDVRRANTLAQKAHLLSEDLVRH
Ga0209448_102482331	3300027783	Bog Forest Soil	AGQIRNYMDGARSALKEGDVRRANTLAEKAHLLADDLVKH
Ga0209910_100289622	3300027803	Thawing Permafrost	LGQIRNYMEGARGALQEGDVRRASTLAEKAHLLADDLLKH
Ga0209656_101590924	3300027812	Bog Forest Soil	VRNYMEGARSALKEGDVQRASTLAEKAHLLADDLVKH
Ga0209068_102734961	3300027894	Watersheds	ETVGQIRNYMEGARSALKEGDVLRANTLAVKAHLLSEDLVKH
Ga0209006_104233881	3300027908	Forest Soil	IHNYMDGARAALKEGDVRRASTLSEKAYLLAEDLAKH
Ga0209698_102073453	3300027911	Watersheds	VGQIRNYMDHARLALKEGDLRRANTLAEKAHLLSDDLVKR
Ga0247271_1286523	3300029903	Soil	LDVSQQQAMSQIHNYVDGARSALQEGDVRRASTLAEKAHLLAEDLLSH
Ga0302280_10511344	3300029985	Fen	SQIHNYVDGARSALQEGDVRRASTLAEKAHLLAEDLLSH
Ga0302210_100942851	3300029995	Fen	YMNGARSALKENDLSRAWTLASKASLLGDDLEQHQPSAQQ
Ga0311348_108570591	3300030019	Fen	ARTLDGRQQETVGQIRNYVVGARSALKEGDVRRAGTLAEKAHLLVEDLVKH
Ga0302191_100997011	3300030049	Bog	STDEQLKQLAGKKLDVSQQQAMSQIHNYVDGARSALQEGDVRRASTLAEKAHLLAEDLLS
Ga0302179_100170094	3300030058	Palsa	ETVGQIRNYMDGARSALKEGDVRRASTLAQKAHLLSEDLLKH
Ga0311370_115583551	3300030503	Palsa	SRSLDAERQETFDQIRNYMDGSRSALKEGDVQRANTLAEKAHLLAEDLAKH
Ga0311372_125971232	3300030520	Palsa	QVKQLSGRTLDAQQQETVGQIRKYMEGARAALKEGDVQRASTLAEKAHLLAEDLVKH
Ga0316363_101654752	3300030659	Peatlands Soil	DAREQETAGQVRNYMVGARSALKEGDLRRASTLAEKAHLLAEDIVKR
Ga0316363_103227901	3300030659	Peatlands Soil	LDARQQETVAQIHNYMGGALSALKEGDVRRANTLAQKAHLLAEDLVKH
Ga0307478_115080771	3300031823	Hardwood Forest Soil	VLPNVHQQETVVQIRNYMDGARSALKEGDVRRARTLAEKAHLLAQDLLKR
Ga0307470_110417541	3300032174	Hardwood Forest Soil	DAGQQEVVGQIRNYMVGARSALKEGDVRRANTLAQKAHLLVEDLAKH
Ga0335078_114261261	3300032805	Soil	RQLAGRTLDTRQLDTVGQIHSYMEGARSALKEGDVGRANTLAQKAHLLAEDLAKH
Ga0335070_108448671	3300032829	Soil	RQQETVSQIHNYMDGARSALKEGDIPRAHTLAQKASLLADDLVKH
Ga0326728_100332961	3300033402	Peat Soil	LNAQQQETVGQIRNYMNGAHSALQEGDVRRASTLAQKAHLLAEDLVKH
Ga0371488_0119073_3_170	3300033983	Peat Soil	KQLAGRVLNAQQQETAAQARNYMEGARAALQEGDLRRASTLAEKAHLLVDDLAKH

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.72
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.72
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F092837

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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