Metagenome Family F092828

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F092828
Family Type	Metagenome
Number of Sequences	107
Average Sequence Length	45 residues
Representative Sequence	MTIATTSSTSRRSLLQHIPELALALAGTALVLLALGPIGWRAGW
Number of Associated Samples	79
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	97.14 %
% of genes near scaffold ends (potentially truncated)	96.26 %
% of genes from short scaffolds (< 2000 bps)	91.59 %
Associated GOLD sequencing projects	73
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (52.336 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (62.617 % of family members)
Environment Ontology (ENVO)	Unclassified (73.832 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (57.009 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 52.78% β-sheet: 0.00% Coil/Unstructured: 47.22%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.41
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.41
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF13561	adh_short_C2	9.35
PF01315	Ald_Xan_dh_C	6.54
PF00106	adh_short	5.61
PF02738	MoCoBD_1	4.67
PF00118	Cpn60_TCP1	0.93
PF07386	DUF1499	0.93
PF06314	ADC	0.93
PF02653	BPD_transp_2	0.93
PF00211	Guanylate_cyc	0.93
PF13358	DDE_3	0.93
PF01243	Putative_PNPOx	0.93
PF07969	Amidohydro_3	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG0459	Chaperonin GroEL (HSP60 family)	Posttranslational modification, protein turnover, chaperones [O]	0.93
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.93
COG4446	Uncharacterized conserved protein, DUF1499 family	Function unknown [S]	0.93
COG4689	Acetoacetate decarboxylase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	52.34 %
Unclassified	root	N/A	47.66 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	52.34 %
Unclassified	root	N/A	47.66 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	52.34 %
Unclassified	root	N/A	47.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.66 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	40.19 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.66 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	31.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.66 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	7.48 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.66 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	7.48 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.80 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.66 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	7.48 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.87 %
Sinorhizobium/Ensifer group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.66 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	7.48 %
Sinorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Sinorhizobium	0.93 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.66 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	7.48 %
Sinorhizobium fredii group	species group	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Sinorhizobium → Sinorhizobium fredii group	0.93 %
Bradyrhizobium sp. Ghvi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Ghvi	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.66 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	7.48 %
Sinorhizobium fredii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Sinorhizobium → Sinorhizobium fredii group → Sinorhizobium fredii	0.93 %
Bradyrhizobium sp. Ghvi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Ghvi	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001867\|JGI12627J18819_10474453	Not Available	513	Open in IMG/M
3300005332\|Ga0066388_105528301	Not Available	640	Open in IMG/M
3300005468\|Ga0070707_101208170	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	722	Open in IMG/M
3300005764\|Ga0066903_106529948	All Organisms → cellular organisms → Bacteria → Proteobacteria	608	Open in IMG/M
3300005764\|Ga0066903_107863630	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Ghvi	548	Open in IMG/M
3300010048\|Ga0126373_10775766	All Organisms → cellular organisms → Bacteria	1020	Open in IMG/M
3300010339\|Ga0074046_10382578	Not Available	852	Open in IMG/M
3300010359\|Ga0126376_10043369	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3139	Open in IMG/M
3300010360\|Ga0126372_12155284	All Organisms → cellular organisms → Bacteria → Proteobacteria	606	Open in IMG/M
3300010361\|Ga0126378_10351929	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1582	Open in IMG/M
3300010361\|Ga0126378_11626901	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	733	Open in IMG/M
3300010361\|Ga0126378_12721571	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	565	Open in IMG/M
3300010366\|Ga0126379_10839083	All Organisms → cellular organisms → Bacteria	1019	Open in IMG/M
3300010366\|Ga0126379_11528463	Not Available	773	Open in IMG/M
3300010366\|Ga0126379_12194291	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	653	Open in IMG/M
3300010376\|Ga0126381_102029564	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	829	Open in IMG/M
3300010376\|Ga0126381_102241807	All Organisms → cellular organisms → Bacteria	785	Open in IMG/M
3300010398\|Ga0126383_12196216	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	638	Open in IMG/M
3300016270\|Ga0182036_11286123	Not Available	610	Open in IMG/M
3300016341\|Ga0182035_10963975	Not Available	755	Open in IMG/M
3300016357\|Ga0182032_10652245	Not Available	880	Open in IMG/M
3300016371\|Ga0182034_10286305	All Organisms → cellular organisms → Bacteria	1315	Open in IMG/M
3300016371\|Ga0182034_10547920	Not Available	970	Open in IMG/M
3300016371\|Ga0182034_11096755	Not Available	690	Open in IMG/M
3300016404\|Ga0182037_10733988	All Organisms → cellular organisms → Bacteria	848	Open in IMG/M
3300016422\|Ga0182039_12207278	Not Available	508	Open in IMG/M
3300016445\|Ga0182038_12021310	Not Available	522	Open in IMG/M
3300020579\|Ga0210407_10367894	All Organisms → cellular organisms → Bacteria	1125	Open in IMG/M
3300021178\|Ga0210408_11094019	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	613	Open in IMG/M
3300021178\|Ga0210408_11403822	Not Available	526	Open in IMG/M
3300021180\|Ga0210396_10226385	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1666	Open in IMG/M
3300021432\|Ga0210384_11202689	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	662	Open in IMG/M
3300021560\|Ga0126371_11313418	Not Available	857	Open in IMG/M
3300025928\|Ga0207700_11782466	Not Available	541	Open in IMG/M
3300027576\|Ga0209003_1036348	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Sinorhizobium → Sinorhizobium fredii group → Sinorhizobium fredii	851	Open in IMG/M
3300027703\|Ga0207862_1033614	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1543	Open in IMG/M
3300031564\|Ga0318573_10686000	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	551	Open in IMG/M
3300031572\|Ga0318515_10769167	Not Available	508	Open in IMG/M
3300031573\|Ga0310915_10278741	All Organisms → cellular organisms → Bacteria	1179	Open in IMG/M
3300031668\|Ga0318542_10390320	Not Available	718	Open in IMG/M
3300031668\|Ga0318542_10414349	Not Available	696	Open in IMG/M
3300031679\|Ga0318561_10047096	Not Available	2145	Open in IMG/M
3300031679\|Ga0318561_10302185	Not Available	875	Open in IMG/M
3300031680\|Ga0318574_10363482	Not Available	844	Open in IMG/M
3300031680\|Ga0318574_10680054	Not Available	603	Open in IMG/M
3300031680\|Ga0318574_10747766	Not Available	573	Open in IMG/M
3300031682\|Ga0318560_10151511	Not Available	1227	Open in IMG/M
3300031713\|Ga0318496_10402872	Not Available	756	Open in IMG/M
3300031719\|Ga0306917_10274400	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1297	Open in IMG/M
3300031719\|Ga0306917_10281390	Not Available	1281	Open in IMG/M
3300031724\|Ga0318500_10314362	Not Available	769	Open in IMG/M
3300031736\|Ga0318501_10508351	All Organisms → cellular organisms → Bacteria → Proteobacteria	657	Open in IMG/M
3300031747\|Ga0318502_10979845	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	515	Open in IMG/M
3300031748\|Ga0318492_10554137	Not Available	612	Open in IMG/M
3300031763\|Ga0318537_10365464	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300031764\|Ga0318535_10129354	Not Available	1119	Open in IMG/M
3300031768\|Ga0318509_10144258	Not Available	1310	Open in IMG/M
3300031768\|Ga0318509_10253415	Not Available	983	Open in IMG/M
3300031769\|Ga0318526_10418676	All Organisms → cellular organisms → Bacteria → Proteobacteria	547	Open in IMG/M
3300031777\|Ga0318543_10575009	Not Available	505	Open in IMG/M
3300031780\|Ga0318508_1041851	All Organisms → cellular organisms → Bacteria	1192	Open in IMG/M
3300031780\|Ga0318508_1191918	Not Available	584	Open in IMG/M
3300031782\|Ga0318552_10270435	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	863	Open in IMG/M
3300031782\|Ga0318552_10357893	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	743	Open in IMG/M
3300031793\|Ga0318548_10144582	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1157	Open in IMG/M
3300031797\|Ga0318550_10164455	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1069	Open in IMG/M
3300031805\|Ga0318497_10377287	All Organisms → cellular organisms → Bacteria → Proteobacteria	793	Open in IMG/M
3300031832\|Ga0318499_10277606	Not Available	649	Open in IMG/M
3300031833\|Ga0310917_10245809	All Organisms → cellular organisms → Bacteria	1203	Open in IMG/M
3300031879\|Ga0306919_11101220	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	605	Open in IMG/M
3300031880\|Ga0318544_10298269	Not Available	625	Open in IMG/M
3300031893\|Ga0318536_10198755	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1021	Open in IMG/M
3300031893\|Ga0318536_10337333	Not Available	763	Open in IMG/M
3300031896\|Ga0318551_10546937	All Organisms → cellular organisms → Bacteria → Proteobacteria	666	Open in IMG/M
3300031910\|Ga0306923_11131128	All Organisms → cellular organisms → Bacteria	841	Open in IMG/M
3300031912\|Ga0306921_11302005	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	804	Open in IMG/M
3300031942\|Ga0310916_10839089	Not Available	772	Open in IMG/M
3300031942\|Ga0310916_11496408	Not Available	550	Open in IMG/M
3300031946\|Ga0310910_11237629	Not Available	578	Open in IMG/M
3300031946\|Ga0310910_11380540	All Organisms → cellular organisms → Bacteria → Proteobacteria	542	Open in IMG/M
3300031947\|Ga0310909_10089803	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2451	Open in IMG/M
3300031954\|Ga0306926_11778287	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	700	Open in IMG/M
3300031959\|Ga0318530_10086988	Not Available	1229	Open in IMG/M
3300031959\|Ga0318530_10319654	Not Available	642	Open in IMG/M
3300031981\|Ga0318531_10524530	Not Available	536	Open in IMG/M
3300032001\|Ga0306922_10965390	Not Available	881	Open in IMG/M
3300032042\|Ga0318545_10059310	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1305	Open in IMG/M
3300032042\|Ga0318545_10203733	All Organisms → cellular organisms → Bacteria → Proteobacteria	708	Open in IMG/M
3300032043\|Ga0318556_10047097	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2073	Open in IMG/M
3300032044\|Ga0318558_10144932	All Organisms → cellular organisms → Bacteria → Proteobacteria	1140	Open in IMG/M
3300032052\|Ga0318506_10322840	Not Available	685	Open in IMG/M
3300032054\|Ga0318570_10116449	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1178	Open in IMG/M
3300032054\|Ga0318570_10156673	Not Available	1020	Open in IMG/M
3300032055\|Ga0318575_10307815	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	802	Open in IMG/M
3300032055\|Ga0318575_10633520	Not Available	541	Open in IMG/M
3300032059\|Ga0318533_10669906	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	761	Open in IMG/M
3300032065\|Ga0318513_10025644	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2507	Open in IMG/M
3300032076\|Ga0306924_10156691	All Organisms → cellular organisms → Bacteria	2608	Open in IMG/M
3300032076\|Ga0306924_11127252	Not Available	853	Open in IMG/M
3300032090\|Ga0318518_10068302	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1726	Open in IMG/M
3300032091\|Ga0318577_10145917	All Organisms → cellular organisms → Bacteria	1125	Open in IMG/M
3300032091\|Ga0318577_10161480	Not Available	1068	Open in IMG/M
3300033289\|Ga0310914_10062210	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3114	Open in IMG/M
3300033289\|Ga0310914_11031489	Not Available	723	Open in IMG/M
3300033289\|Ga0310914_11449933	Not Available	589	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	91.59%
Loam	Environmental → Terrestrial → Soil → Loam	7.48%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.93%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	79.44%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	12.15%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.61%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.87%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	62.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	16.82%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	12.15%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.74%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.87%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.87%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300027576	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027703	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 81 (SPAdes)	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12627J18819_104744531	3300001867	Forest Soil	MTIATTSSTTRRSLLQHIPELALAFAGTAIVLLALGPIGWRA
Ga0066388_1055283011	3300005332	Tropical Forest Soil	MTIATTSSAARRSLLRHIPELALALAGTAVVLLALGPIGWRA
Ga0070707_1012081701	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MTALPSSSSVKRSVLRHLPVLALALASIAAVLLALGPIGWRVGW
Ga0066903_1065299481	3300005764	Tropical Forest Soil	MTITTTSSNAQRTVLRHTPLLALALAMIAVVLLALGPIGWRVGWWHFRFALLTLM
Ga0066903_1078636301	3300005764	Tropical Forest Soil	MTMATTSSTARRSLLRHVPELALALAGTAVVLLAL
Ga0126373_107757661	3300010048	Tropical Forest Soil	MTIATTSFTARQSVLKHVPELPLALAGIAMVLLALGPIG
Ga0074046_103825781	3300010339	Bog Forest Soil	MAIATTSSGVGRNLLRYAPRLALALAAIAVLLLALGPIGWRV
Ga0126376_100433691	3300010359	Tropical Forest Soil	MTIATTSSTSRRSLLQHIPELALVLAGTALVLLASGPIG
Ga0126372_121552842	3300010360	Tropical Forest Soil	MAIATSSSSTQRSLLRYGPPFALALAVIAVVLLAVGPIGWRAGWWHFRFAFLNLM
Ga0126378_103519291	3300010361	Tropical Forest Soil	MTIATTSSGARRSLLRHAPLLALALAAVSVVLLAAGPIGWRAGWWH
Ga0126378_116269011	3300010361	Tropical Forest Soil	MTIATTSSRTRESLLHHAPVLALSLAGTAAVLLALAPLGWRAGWWQFRFSLLTLMP
Ga0126378_127215711	3300010361	Tropical Forest Soil	MTIATTSSTARQSVLKHVPELALALAAVAAVLLALGPIGWRLGWWHFR
Ga0126379_108390831	3300010366	Tropical Forest Soil	MTVATTSFTARQSVLKHVPELALALAGIALVLLALGPIGWRL
Ga0126379_115284631	3300010366	Tropical Forest Soil	MTIATTSTTSRRSLLQHIPELALALAGTALVLLALGPIGWRAGWWHFRFSLL
Ga0126379_121942911	3300010366	Tropical Forest Soil	MTIATTSSTVRRSLLQHIPELALALAGTAVVLLALGPIGW
Ga0126381_1020295641	3300010376	Tropical Forest Soil	MTIATTSSTAQQSVLKHVPELALGLAAVAAVLLALGPIGWRLGWWHFRFS
Ga0126381_1022418072	3300010376	Tropical Forest Soil	MTVATTSFTARQSVLKHVPELALAFAGIALVLLALG
Ga0126383_121962161	3300010398	Tropical Forest Soil	MTIATTSFTARQSVLKHVPELALALAGIALVLLALGPIGWRLGWWHFRFSLLTLMP
Ga0182036_112861231	3300016270	Soil	MTIATTSFTARQSVLKHVPELALALAGIAVVLLALGPIGWRLGWWHF
Ga0182035_109639751	3300016341	Soil	MTIATTSSTSRRSLLQHIPELALALAGTALVLLALGPIGWRAGWWHFRFSLLTLM
Ga0182032_106522451	3300016357	Soil	MTIATTSTTSRRSLLQHIPELALALAGMALVLLALGPIGWRAG
Ga0182034_102863054	3300016371	Soil	MTIATTSTTSRRPLPHHIPELALALAGMALVLLALGPIGWRAGWWHFRFSLLTL
Ga0182034_105479202	3300016371	Soil	MTIATTSTTSRRSLLQHIPEPALALAGMALVLLALGPIGWRAGWWHFR
Ga0182034_110967551	3300016371	Soil	MTITTTSSSAQRTVLRHTPLLALALAVIAVVLLALGPIGWHVGWWHFRFA
Ga0182037_107339881	3300016404	Soil	MTVATTSFTARQSVLKHVPELALALAGIALVLLALGPIGWRLGWWHFRF
Ga0182039_122072781	3300016422	Soil	MTIATTSTTSRRSLLQHIPELALALAGMALVLLAL
Ga0182038_120213101	3300016445	Soil	MTIATTSSATRQSVLKHVPELALALAGIAVVLLALGPIGWRLGWW
Ga0210407_103678942	3300020579	Soil	MTIATTSSTSRRSLLQHIPELALALAGTALVLLALGPIGWRA
Ga0210408_110940191	3300021178	Soil	MTIATTSSRARQSLVQHAPSLALSLAGTAVVLLALGPLGW
Ga0210408_114038221	3300021178	Soil	MTIATTSSTSRRSLLQHIPELALALAGTALLLLALGPIGWRAGWWHFRFSLL
Ga0210396_102263853	3300021180	Soil	VLGGAVMTIATTSSTTRRSLLQRIPELALALAGTAIVLLALDRIG
Ga0210384_112026892	3300021432	Soil	MTIATTSSSAGRSLLRFMPLLAAVLAAVAVALLAIGP
Ga0210410_106436721	3300021479	Soil	MTFATTASGAGRSPLRHLPVLAAALAAIAVVLLALGPIGWRAGWW
Ga0126371_113134182	3300021560	Tropical Forest Soil	MTVATTSSAARRSLRHIPELALALAATAVVLLALAPIGWRAG
Ga0207700_117824661	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MTLATTASGAGRSLLRHLPVLAAALAAAAVVLLALGPIGWRAGW
Ga0209003_10363481	3300027576	Forest Soil	MTIATTSSTSRRSLLQHIPELALALAGTALVLLALAPIGWRAGWWHFRFSL
Ga0207862_10336141	3300027703	Tropical Forest Soil	MAIATTSSSVRRSLLRYAPLFALVLAVIAVVLLALGPIGWRAGWWHF
Ga0318573_106860001	3300031564	Soil	GTMTIATTSRKASRSLVQHAPVLAFALAGTAVVLLALAPLG
Ga0318515_107691671	3300031572	Soil	MTIATTSTTSRRSLLQHIPELALALAGMALVLLALGPIGW
Ga0310915_102787412	3300031573	Soil	MAIATTSSGASRSVLRHAPLLALALAVIAAALLTVGPIGWRAGWWHFRF
Ga0318542_103903201	3300031668	Soil	MTIATTSTTSRRSLLQHIPELALALAGMALVLLALGPIGWRAGWW
Ga0318542_104143491	3300031668	Soil	MTIATTSSTSRRSLLQHIPELALALAGTALVLLALGPIGWRAGWWHFRFSL
Ga0318561_100470964	3300031679	Soil	MTIATTSTTSRRSLLQHIPELALALAGMALVLLALGPI
Ga0318561_103021851	3300031679	Soil	MTIATTSSATRQSVLKHVPELALALAGIAVVLLALGPIGWRLGWWHFR
Ga0318574_103634821	3300031680	Soil	MTIATTSTTSRRSLLQHIPEPALALAGMALVLLALGPIGWRAGWWHFRF
Ga0318574_106800541	3300031680	Soil	MTIATTSSTSRRSLLQHIPELALALAGTALVLLALGPI
Ga0318574_107477662	3300031680	Soil	MTIATTSSTVRQSLLQHVPELALALAGTAVVLLALVPIGWRAGWWHFRFSLLTLM
Ga0318560_101515111	3300031682	Soil	MTIATTSTTSRRSLLQHIPELALALAGMALVLLALGPIGWRAGWWHFRFSLLT
Ga0318496_104028721	3300031713	Soil	MTIATTSTTSRRPLPHHIPELALALAGMALVLLALGPIGWRAGWWHFRF
Ga0306917_102744001	3300031719	Soil	MAIASTSSSARRSLLRFAPVCALVLAMIAVVLLALGPIGWRAGWWHFRFA
Ga0306917_102813902	3300031719	Soil	MTIATTSRKASRSLVQHAPVLAFALAGTAVVLLALAPLGWRAGWWHFRV
Ga0318500_103143621	3300031724	Soil	MAIASTSSSARRSLLRFAPVCALVLAMIAVVLLALGPIGWRAGWWH
Ga0318501_105083511	3300031736	Soil	MAIASTSSSARRSLLRFAPVCALVLAMIAVVLLALGPIGWRAGWWHFRFALLR
Ga0318502_109798451	3300031747	Soil	MTIATTSTTSRRPLPHHIPELALALAGMALVLLALGPIGWRAGWWHFRFSLLTLMPWA
Ga0318492_105541371	3300031748	Soil	MTIATTSSTTRQSVLKHVPELALALAGIAVVLLALGP
Ga0318537_103654641	3300031763	Soil	AKLMAIATASSGARRSLLRHAPLLALALAVIAVALLTVGPIGWRAGWWHFRFARP
Ga0318535_101293541	3300031764	Soil	MAIATSSSSTQRSLLRYGPPFALALAVIAVVLLAVGPIGWR
Ga0318509_101442582	3300031768	Soil	MTIATTSSTSRRSLLQHIPELALALAGTALVLLALGPIGW
Ga0318509_102534151	3300031768	Soil	MTIATTSRKASRSLVQHAPVLAFALAGTAVVLLALA
Ga0318526_104186762	3300031769	Soil	MAIATTSSGARRSVLRYSPLLALALAVIASALLAVGPIGWRAGWWHFRFAFLTL
Ga0318543_105750092	3300031777	Soil	MTMATTSSTSRRSLLQHIPELALALAGTALVLLALGPIG
Ga0318508_10418512	3300031780	Soil	MTIATTSTTSRRSLLQHIPELALALAGTALVLLALG
Ga0318508_11919182	3300031780	Soil	MTIATTSSTSRRSLLQHIPELALALAGTALVLLALG
Ga0318552_102704351	3300031782	Soil	MTIATTSSRARQSLVQHAPSLALSLAGTAVVLLALGPLGWRAGWWHYR
Ga0318552_103578931	3300031782	Soil	MTIATTSSTARQSVLKHVPELALALAGIAVVLLALG
Ga0318548_101445822	3300031793	Soil	MTIATTSSTARQSVLKHVPELALALAGIAMVLLALGPIGWRLGWWHFRF
Ga0318576_102271671	3300031796	Soil	MATTTTSSSTRRSLARVAPMFALVLATIAVVLLALGPIGWRAGWW
Ga0318550_101644551	3300031797	Soil	MTIATTSSTARQSVLKHVPELALALAGIAVVLLALGPIG
Ga0318497_103772871	3300031805	Soil	MAIATSSSSTQRSLLRYGPPFALALAVIAVVLLAVGPIGWRAGWWHFRFAFLNLMP
Ga0318499_102776061	3300031832	Soil	MTIATTSSTSRRSLLQHIPELALALAGTALVLLALGPIGWRAGWWHFRFSLLT
Ga0310917_102458092	3300031833	Soil	MTIATTSTTSRRSLLQHIPEPALALAGMALVLLAL
Ga0306919_111012201	3300031879	Soil	MTIATTSTTSRRSLLQHIPEPALALAGMALVLLALGPIGWRAGWWHFRFSLLTLMP
Ga0318544_102982692	3300031880	Soil	MTIATTSTTSRRSLLQHIPELALALAGMALVLLALG
Ga0318536_101987552	3300031893	Soil	MTIATTSRKASRSLVQHAPVLAFALAGTAVVLLALAPLG
Ga0318536_103373332	3300031893	Soil	MTIATTSTTSRRSLLQHIPELALALAGMALVLLALGPIGWRAGWWH
Ga0318551_105469371	3300031896	Soil	MTIVTGYSEARRSLVRHAPLLALALAMIAVVLLALGPIGWRAGWWHFRFSLLS
Ga0306923_111311281	3300031910	Soil	MTIATTSSTSRRSLLQHIPELALALAGTALVLLALGPIGWRAGW
Ga0306921_113020051	3300031912	Soil	MTIATTSFTARQSVLKHVPELALALAGIAVVLLALGPIGWR
Ga0310916_108390891	3300031942	Soil	MTIATTSSATRQSVLKHVPELALALAGIAVVLLALGPIGWRLGWWHF
Ga0310916_114964081	3300031942	Soil	MTIATTSITSRRSLLQHIPELALALAGTALVLLALGPIGWR
Ga0310910_112376292	3300031946	Soil	MTIATTSFTARQSVLKHVPELALALAGIALVLLALG
Ga0310910_113805401	3300031946	Soil	MTIVTGYSEARRSLVRHAPLLALALAMIAVALLTLGPIGWRAGWWHYRV
Ga0310909_100898032	3300031947	Soil	MTIATTSRKASRSLVQHAPVLAFALAGTAVVLLALAPLGWRAGWWHFRVSLLTL
Ga0306926_117782871	3300031954	Soil	MTIATTSTTSRRSLLQHIPEPALALAGMALVLLALGPIGWRAGWWHFRFSLLTLMPWA
Ga0318530_100869883	3300031959	Soil	MTIATTSTTSRRSLLQHIPELALALAGMALVLLALGPIGWRA
Ga0318530_103196541	3300031959	Soil	MTIVTGYSEARRSLVRHAPLLALALAMIAVVLLALGPIGWRAGWWHSASLF
Ga0318531_105245302	3300031981	Soil	MTIATKSPTARRSLLQHVPELALALAGTAVVLLALAPIGWRAGWWHFRFSL
Ga0306922_109653903	3300032001	Soil	MTIATTSSATRQSVLKHVAELALALAGIAVVLLALGPIGWRL
Ga0318545_100593102	3300032042	Soil	MTIATTSSTARQSVLKHVPELALALAGIAVVLLAL
Ga0318545_102037332	3300032042	Soil	MTIVTGYSEARRSLVRHAPLLALALAMIAVALLALGPIGWRAGWWHFRFSLLSLMP
Ga0318556_100470971	3300032043	Soil	MTIATTSSTARQSVLKHVPELALALAGIAMVLLALG
Ga0318558_101449321	3300032044	Soil	MTIATTSSTSRRSLLQHIPELALALAGTALVLLALGP
Ga0318506_103228401	3300032052	Soil	MTIATTSTTSRRSLLQHIPELALALAGTALVLLALGPIGWRAGWWHFRF
Ga0318570_101164491	3300032054	Soil	MTIATTSSTARQSVLKHVPELALALAGIAVVLLALGPIGWRLGWW
Ga0318570_101566732	3300032054	Soil	MAIATTSSGARRSVLRYSPLLALALAVIASALLAVGPIGWRAGWW
Ga0318575_103078151	3300032055	Soil	MTIATTSSRARQSLVQHAPSLALSLAGTAVVLLALGPLGWRAGWWHYRF
Ga0318575_106335201	3300032055	Soil	MTIATTSTTSRRPLPHHIPELALALAGMALVLLALGPI
Ga0318533_106699062	3300032059	Soil	MTIATTSRKASRSLVQHAPVLAFALAGTAVVLLALAPLGWRAGWWHFRVSLLTLLPW
Ga0318513_100256444	3300032065	Soil	MAIATTSSGARRSVLRYSPLLALALAVIASALLAVGPIGWRAGWWHFRFAFLTLM
Ga0306924_101566911	3300032076	Soil	MTIATTSTTSRRSLLQHIPEPALALAGMALVLLALGPIG
Ga0306924_111272522	3300032076	Soil	MTIATTSITSRRSLLQHIPELALALAGTALVLLALGPIGWRAGWWHFR
Ga0318518_100683021	3300032090	Soil	MTIATTSSTARQSVLKHVPELALALAGIAMVLLALGPIGWRLGWWHFRFSLLTLM
Ga0318577_101459173	3300032091	Soil	MTIATTSTTSRRPLPHHIPELALALAGMALVLLALGP
Ga0318577_101614802	3300032091	Soil	MTIATTSTTSRRSLLQHIPELALALAGMALVLLALGPIGWRAGW
Ga0310914_100622104	3300033289	Soil	MTIATTSSTTRQSVLKHVPELALALAGIAVVLLALGPIGWRL
Ga0310914_110314891	3300033289	Soil	MTIATTSSTARQSLLQHVPELALALAGTAVVLLALGPIGWRAGWW
Ga0310914_114499331	3300033289	Soil	MTIATTSITSRRSLLQHIPELALALAGTALVLLALGPIGWRAGWW

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F092828

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences