Metagenome / Metatranscriptome Family F092819

Basic Information
Family ID	F092819
Family Type	Metagenome / Metatranscriptome
Number of Sequences	107
Average Sequence Length	42 residues
Representative Sequence	MSAPSVQVETRGAVALVTLNRPESANTLNLQMAMDLLAA
Number of Associated Samples	105
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	96.26 %
% of genes near scaffold ends (potentially truncated)	99.07 %
% of genes from short scaffolds (< 2000 bps)	85.98 %
Associated GOLD sequencing projects	101
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.37

Most Common Taxonomy
Group	Bacteria (94.393 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (23.364 % of family members)
Environment Ontology (ENVO)	Unclassified (24.299 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (44.860 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 17.91% β-sheet: 20.90% Coil/Unstructured: 61.19%
Feature Viewer

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Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF00111	Fer2	66.36
PF02567	PhzC-PhzF	14.02
PF07615	Ykof	6.54
PF07690	MFS_1	3.74
PF01636	APH	3.74
PF00144	Beta-lactamase	1.87
PF00355	Rieske	1.87

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG0384	Predicted epimerase YddE/YHI9, PhzF superfamily	General function prediction only [R]	14.02
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	1.87
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	1.87
COG2367	Beta-lactamase class A	Defense mechanisms [V]	1.87

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	94.39 %
Unclassified	root	N/A	5.61 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	94.39 %
Unclassified	root	N/A	5.61 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	94.39 %
Unclassified	root	N/A	5.61 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	50.47 %
Unclassified	root	N/A	5.61 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.93 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	23.36 %
Unclassified	root	N/A	5.61 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3.74 %
unclassified Proteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria	0.93 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.93 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	23.36 %
Unclassified	root	N/A	5.61 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.93 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.93 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	0.93 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	23.36 %
Unclassified	root	N/A	5.61 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.93 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.93 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.93 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	23.36 %
Unclassified	root	N/A	5.61 %
Bacillaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae	0.93 %
Sphingomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	0.93 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.93 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	23.36 %
Unclassified	root	N/A	5.61 %
Sphingomonas sanxanigenens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas sanxanigenens	0.93 %
Bacillus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae → Bacillus	0.93 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.93 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	23.36 %
Unclassified	root	N/A	5.61 %
unclassified Bacillus (in: Bacteria)	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae → Bacillus → unclassified Bacillus (in: Bacteria)	0.93 %
Sphingomonas sanxanigenens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas sanxanigenens	0.93 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.93 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	23.36 %
Unclassified	root	N/A	5.61 %
Bacillus sp. OK085	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae → Bacillus → unclassified Bacillus (in: Bacteria) → Bacillus sp. OK085	0.93 %
Sphingomonas sanxanigenens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas sanxanigenens	0.93 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2029527000\|GBANfinal_contig55608	All Organisms → cellular organisms → Bacteria → Proteobacteria	516	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c2429501	All Organisms → cellular organisms → Bacteria	726	Open in IMG/M
3300000955\|JGI1027J12803_101233658	All Organisms → cellular organisms → Bacteria → Proteobacteria	839	Open in IMG/M
3300005334\|Ga0068869_102011130	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas sanxanigenens	519	Open in IMG/M
3300005434\|Ga0070709_11084199	All Organisms → cellular organisms → Bacteria	640	Open in IMG/M
3300005436\|Ga0070713_102346273	All Organisms → cellular organisms → Bacteria → Proteobacteria	516	Open in IMG/M
3300005459\|Ga0068867_100878379	All Organisms → cellular organisms → Bacteria → Proteobacteria	805	Open in IMG/M
3300005540\|Ga0066697_10392238	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	807	Open in IMG/M
3300005541\|Ga0070733_10960959	All Organisms → cellular organisms → Bacteria → Proteobacteria	574	Open in IMG/M
3300005544\|Ga0070686_100305650	All Organisms → cellular organisms → Bacteria → Proteobacteria	1181	Open in IMG/M
3300005559\|Ga0066700_10012576	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4462	Open in IMG/M
3300005564\|Ga0070664_100023340	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	5109	Open in IMG/M
3300005598\|Ga0066706_10402347	All Organisms → cellular organisms → Bacteria → Proteobacteria	1090	Open in IMG/M
3300005764\|Ga0066903_101339850	All Organisms → cellular organisms → Bacteria → Proteobacteria	1340	Open in IMG/M
3300005841\|Ga0068863_100889050	All Organisms → cellular organisms → Bacteria	891	Open in IMG/M
3300006163\|Ga0070715_10012555	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3087	Open in IMG/M
3300006354\|Ga0075021_10281371	All Organisms → cellular organisms → Bacteria → Proteobacteria	1028	Open in IMG/M
3300009012\|Ga0066710_102192116	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	807	Open in IMG/M
3300009174\|Ga0105241_11679630	All Organisms → cellular organisms → Bacteria	616	Open in IMG/M
3300009545\|Ga0105237_10970265	All Organisms → cellular organisms → Bacteria	857	Open in IMG/M
3300010043\|Ga0126380_11985533	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300010048\|Ga0126373_10865401	All Organisms → cellular organisms → Bacteria → Proteobacteria	967	Open in IMG/M
3300010358\|Ga0126370_10997904	All Organisms → cellular organisms → Bacteria	764	Open in IMG/M
3300010379\|Ga0136449_101948123	Not Available	871	Open in IMG/M
3300010397\|Ga0134124_11947483	All Organisms → cellular organisms → Bacteria	624	Open in IMG/M
3300010401\|Ga0134121_10049715	All Organisms → cellular organisms → Bacteria	3435	Open in IMG/M
3300010864\|Ga0126357_1333620	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300011120\|Ga0150983_14722067	All Organisms → cellular organisms → Bacteria	787	Open in IMG/M
3300012203\|Ga0137399_10452244	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1074	Open in IMG/M
3300012357\|Ga0137384_10436523	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1079	Open in IMG/M
3300012469\|Ga0150984_116720330	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300012685\|Ga0137397_10357944	All Organisms → cellular organisms → Bacteria → Proteobacteria	1087	Open in IMG/M
3300012927\|Ga0137416_10543412	All Organisms → cellular organisms → Bacteria → Proteobacteria	1006	Open in IMG/M
3300012989\|Ga0164305_10009802	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	4567	Open in IMG/M
3300014325\|Ga0163163_12402818	Not Available	585	Open in IMG/M
3300016357\|Ga0182032_11605347	All Organisms → cellular organisms → Bacteria	566	Open in IMG/M
3300016404\|Ga0182037_10046892	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2863	Open in IMG/M
3300017553\|Ga0182744_1249222	All Organisms → cellular organisms → Bacteria	643	Open in IMG/M
3300017927\|Ga0187824_10143796	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	788	Open in IMG/M
3300017930\|Ga0187825_10198612	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	721	Open in IMG/M
3300017937\|Ga0187809_10329387	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M
3300017961\|Ga0187778_10176182	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1356	Open in IMG/M
3300017966\|Ga0187776_10460326	All Organisms → cellular organisms → Bacteria → Proteobacteria	863	Open in IMG/M
3300017970\|Ga0187783_11386554	All Organisms → cellular organisms → Bacteria → Proteobacteria	506	Open in IMG/M
3300017972\|Ga0187781_11068204	All Organisms → cellular organisms → Bacteria	592	Open in IMG/M
3300017973\|Ga0187780_10041658	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3208	Open in IMG/M
3300018429\|Ga0190272_12600787	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M
3300018431\|Ga0066655_10016723	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3331	Open in IMG/M
3300020581\|Ga0210399_11484005	Not Available	527	Open in IMG/M
3300021168\|Ga0210406_10853620	All Organisms → cellular organisms → Bacteria	689	Open in IMG/M
3300021178\|Ga0210408_11085237	All Organisms → cellular organisms → Bacteria	616	Open in IMG/M
3300021181\|Ga0210388_11070306	All Organisms → cellular organisms → Bacteria	689	Open in IMG/M
3300021401\|Ga0210393_10167063	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1772	Open in IMG/M
3300021402\|Ga0210385_11375011	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300021404\|Ga0210389_11558827	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300021407\|Ga0210383_10265527	All Organisms → cellular organisms → Bacteria	1474	Open in IMG/M
3300022530\|Ga0242658_1223425	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300023079\|Ga0247758_1043482	All Organisms → cellular organisms → Bacteria	1225	Open in IMG/M
3300023267\|Ga0247771_1150695	All Organisms → cellular organisms → Bacteria	689	Open in IMG/M
3300023270\|Ga0247784_1016326	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1725	Open in IMG/M
3300025325\|Ga0209341_10346798	All Organisms → cellular organisms → Bacteria	1213	Open in IMG/M
3300025903\|Ga0207680_11374488	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300025914\|Ga0207671_10518022	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	951	Open in IMG/M
3300025928\|Ga0207700_11779706	All Organisms → cellular organisms → Bacteria → Proteobacteria	542	Open in IMG/M
3300025941\|Ga0207711_10436724	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1218	Open in IMG/M
3300026298\|Ga0209236_1146913	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1002	Open in IMG/M
3300026555\|Ga0179593_1143729	All Organisms → cellular organisms → Bacteria → Proteobacteria	2141	Open in IMG/M
3300026555\|Ga0179593_1779399	Not Available	1421	Open in IMG/M
3300027459\|Ga0207505_103794	Not Available	939	Open in IMG/M
3300027648\|Ga0209420_1199991	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300027889\|Ga0209380_10347916	All Organisms → cellular organisms → Bacteria	870	Open in IMG/M
3300027986\|Ga0209168_10192922	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1021	Open in IMG/M
3300028906\|Ga0308309_11604536	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M
3300029999\|Ga0311339_11509956	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae → Bacillus → unclassified Bacillus (in: Bacteria) → Bacillus sp. OK085	598	Open in IMG/M
3300030058\|Ga0302179_10110158	All Organisms → cellular organisms → Bacteria → Proteobacteria	1217	Open in IMG/M
3300030739\|Ga0302311_10152308	All Organisms → cellular organisms → Bacteria	1800	Open in IMG/M
3300031057\|Ga0170834_104704038	All Organisms → cellular organisms → Bacteria → Proteobacteria	780	Open in IMG/M
3300031128\|Ga0170823_14938672	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	884	Open in IMG/M
3300031616\|Ga0307508_10303657	All Organisms → cellular organisms → Bacteria	1189	Open in IMG/M
3300031713\|Ga0318496_10641694	All Organisms → cellular organisms → Bacteria	586	Open in IMG/M
3300031723\|Ga0318493_10107952	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1404	Open in IMG/M
3300031723\|Ga0318493_10723642	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300031740\|Ga0307468_100921611	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	760	Open in IMG/M
3300031744\|Ga0306918_11512356	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300031748\|Ga0318492_10146352	All Organisms → cellular organisms → Bacteria	1189	Open in IMG/M
3300031751\|Ga0318494_10239231	All Organisms → cellular organisms → Bacteria	1039	Open in IMG/M
3300031764\|Ga0318535_10542869	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300031768\|Ga0318509_10056355	All Organisms → cellular organisms → Bacteria → Proteobacteria	2020	Open in IMG/M
3300031770\|Ga0318521_10265342	All Organisms → cellular organisms → Bacteria	1005	Open in IMG/M
3300031833\|Ga0310917_10147178	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1552	Open in IMG/M
3300031835\|Ga0318517_10201803	All Organisms → cellular organisms → Bacteria → Proteobacteria	896	Open in IMG/M
3300031845\|Ga0318511_10071545	All Organisms → cellular organisms → Bacteria → Proteobacteria	1434	Open in IMG/M
3300031890\|Ga0306925_11136212	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	787	Open in IMG/M
3300031894\|Ga0318522_10345341	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300031945\|Ga0310913_10347605	All Organisms → cellular organisms → Bacteria	1049	Open in IMG/M
3300031947\|Ga0310909_11059421	All Organisms → cellular organisms → Bacteria	660	Open in IMG/M
3300031962\|Ga0307479_11106414	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	758	Open in IMG/M
3300032041\|Ga0318549_10021305	All Organisms → cellular organisms → Bacteria → Proteobacteria	2457	Open in IMG/M
3300032059\|Ga0318533_10250879	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1277	Open in IMG/M
3300032261\|Ga0306920_100276160	All Organisms → cellular organisms → Bacteria → Proteobacteria	2505	Open in IMG/M
3300032770\|Ga0335085_10073137	All Organisms → cellular organisms → Bacteria → Proteobacteria	4527	Open in IMG/M
3300032783\|Ga0335079_11633529	All Organisms → cellular organisms → Bacteria	632	Open in IMG/M
3300032828\|Ga0335080_10204074	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2173	Open in IMG/M
3300032892\|Ga0335081_10487240	Not Available	1556	Open in IMG/M
3300032898\|Ga0335072_10940510	All Organisms → cellular organisms → Bacteria	803	Open in IMG/M
3300032955\|Ga0335076_10057851	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3833	Open in IMG/M
3300033475\|Ga0310811_11456082	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	87.85%
Host-Associated	Host-Associated	11.21%
Engineered	Engineered	0.93%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	84.11%
Plants	Host-Associated → Plants	11.21%
Aquatic	Environmental → Aquatic	3.74%
Solid Waste	Engineered → Solid Waste	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	78.50%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.54%
Freshwater	Environmental → Aquatic → Freshwater	2.80%
Peat	Environmental → Terrestrial → Peat	2.80%
Plant Litter	Environmental → Terrestrial → Plant Litter	2.80%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.80%
Roots	Host-Associated → Plants → Roots	1.87%
Sediment	Environmental → Aquatic → Sediment	0.93%
Grass	Engineered → Solid Waste → Grass	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	57.94%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	10.28%
Loam	Environmental → Terrestrial → Soil → Loam	10.28%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.74%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.80%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.80%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	2.80%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.80%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.80%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.93%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.93%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.93%
Composting	Engineered → Solid Waste → Grass → Composting	0.93%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	31.78%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.76%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	10.28%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.48%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.67%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.74%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.80%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.80%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	2.80%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.80%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.80%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.93%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.93%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.93%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.93%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.93%
Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	23.36%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.61%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	5.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.67%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	4.67%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.74%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.80%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.80%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.80%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	2.80%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	2.80%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.80%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.87%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.87%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.87%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.87%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.87%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.87%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.93%
Compost	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Compost	0.93%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.93%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.93%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.93%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.93%
Ectomycorrhiza	Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.93%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.93%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.93%
Green-Waste Compost	Engineered → Solid Waste → Grass → Composting → Bioreactor → Green-Waste Compost	0.93%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2029527000	Green-waste compost microbial community at University of California, Davis, USA, from solid state bioreactor - Inoculum 16S MiniPCR	Engineered	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010864	Boreal forest soil eukaryotic communities from Alaska, USA - W3-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017553	Enriched Miracle-Growth compost microbial communities from Emeryville, California, USA - eDNA 3rd pass 30_C Kraft MG (version 2)	Environmental	Open in IMG/M
3300017927	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4	Environmental	Open in IMG/M
3300017930	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5	Environmental	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300022530	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300023079	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L156-409C-4	Environmental	Open in IMG/M
3300023267	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L197-509C-6	Environmental	Open in IMG/M
3300023270	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L169-409R-5	Environmental	Open in IMG/M
3300025325	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_2 (SPAdes)	Environmental	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300027459	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-ROWE17-A (SPAdes)	Environmental	Open in IMG/M
3300027648	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030058	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_1	Environmental	Open in IMG/M
3300030739	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_3	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031616	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM	Host-Associated	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GBAN_1578580	2029527000	Green-Waste Compost	MSTPTVNVETRGAVALVTLNRPDVSNTLNLQVAMDLLA
ICChiseqgaiiDRAFT_24295011	3300000033	Soil	MSAPTVEVQSRGAVAIVTINRPEVSNTLNLQTAMDLL
JGI1027J12803_1012336581	3300000955	Soil	MSAPVVQVETRGAVALVILNRPESGNALNLQVAMDLLAAAMTCARNAAV
Ga0068869_1020111302	3300005334	Miscanthus Rhizosphere	MSAPTVQVESRGAVTVVTLNRPDSSNTLNIQMAMDLLAAAMT
Ga0070709_110841991	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MSAPCVQVETRGTVAVVTLNRPDTSNAINLQTAMDLLAAAMTCARNNT
Ga0070713_1023462732	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MSTPSVQVETRGAVALVTLNRPDGANTLNLEMAMDLLAAAMTCGR
Ga0068867_1008783791	3300005459	Miscanthus Rhizosphere	MSTTTVEVESRGAVAVVTINRPESGNALSLEVGMDLMAAA
Ga0066697_103922383	3300005540	Soil	MAAATVEVETRGAVAIVTLNRPQSANTLNLQMAMDL
Ga0070733_109609592	3300005541	Surface Soil	MAAPAVQVETRGAVALVTLNRPDSGNALNLQMAMDLMAA
Ga0070686_1003056503	3300005544	Switchgrass Rhizosphere	MSAPLVEMETRGSVAVITLNRPDLSNTLNLQMAMDLLAAAMTCGRNSAVR
Ga0066700_100125761	3300005559	Soil	MAAASVEVETRGAVALVTLNRPESANTLNLQMAMDLLAAAMTCARN
Ga0070664_1000233401	3300005564	Corn Rhizosphere	MSTSSVQVDTRGAVAVVTLNRPESSNTLNLEMAMDLLAAAMTCGRNPA
Ga0066706_104023471	3300005598	Soil	MAPASVEVETRGAVALVTLNRPQSSNTLNLRMAMDLLAAAMT
Ga0066903_1013398504	3300005764	Tropical Forest Soil	MSAPAVQVETRGAVALVTLNRPESGNALNLQVAMDLLA
Ga0068863_1008890501	3300005841	Switchgrass Rhizosphere	MSAPTVQVESRGAVAIVTINRPEVSNTLNLQTAMDLLAAAMTCGRN
Ga0070715_100125551	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	VSAPTVQVETRGAVALVTLNRPENANTLNLQMAMD
Ga0075021_102813711	3300006354	Watersheds	VSTSSVQVETRGAVALVTLNRPESANTLNLEMAMDLLAAALTCARN
Ga0066710_1021921163	3300009012	Grasslands Soil	MAAASVEVETRGAVALVTLNRPESANTLNLQMAMDLL
Ga0105241_116796301	3300009174	Corn Rhizosphere	MSAPLVEMETRGSVAVITLNRPDLSNTLNLQMAMDLLAAAMTCGRNS
Ga0105237_109702651	3300009545	Corn Rhizosphere	MSTSSVQVETRGAVAVVTLNRPDSSNTLNLEMAMDLLAAAMTCG
Ga0126380_119855331	3300010043	Tropical Forest Soil	MATVTVEVETRGPVALVTLNRPDSANTLNLQVAMDLL
Ga0126373_108654011	3300010048	Tropical Forest Soil	VSAANVQVETRGAVALVTLNRPEHSNTLNLQLAMDLLAA
Ga0126370_109979041	3300010358	Tropical Forest Soil	MSAPSVQAETHGAVALVTLNRPEHSNTLNLQMAMDLLAAAMACARN
Ga0136449_1019481233	3300010379	Peatlands Soil	MSAPSVQVETHGAVALVTLNRPEHSNTLNLQMAMDLLAAAMACAR
Ga0134124_119474831	3300010397	Terrestrial Soil	MSAPTVQVESRGAVTVVTLNRPDSSNTLNIQMAMDLL
Ga0134121_100497156	3300010401	Terrestrial Soil	MSAPVVQVETRGAVALVILNRPESGNALNLQVAMDLLAA
Ga0126357_13336202	3300010864	Boreal Forest Soil	MSTSSVQVETRGAVALVTLNRPDSANTFNLEMAMDLLAAAM
Ga0150983_147220673	3300011120	Forest Soil	MSAPVVQVDTRGAVALVTLNRPDSGNALNLQVAMDLLAAAMTCAR
Ga0137399_104522441	3300012203	Vadose Zone Soil	MAAASIEVETRGAVALVTLNRPESANTLNLQMAMDL
Ga0137384_104365231	3300012357	Vadose Zone Soil	MAAATVEVETRGAVAVVTLNRPQSANTLNLQMAMDLLAAAMACA
Ga0150984_1167203302	3300012469	Avena Fatua Rhizosphere	MSAPTVQVESRGAVAIVTINRPDVSNTLNLQTAMDLLAAAMTCGRNSGVR
Ga0137397_103579441	3300012685	Vadose Zone Soil	MSTPSVQVETRGPVALVRLNRPESSNAINLQMAMDLLAAAMTC
Ga0137416_105434123	3300012927	Vadose Zone Soil	MAAASIEVETRGAVALVTLNRPESANTLNLQMAMDLLAAAMTCARNAA
Ga0164305_100098021	3300012989	Soil	VSAPTVQVETRGAVALVTLNRPENANTLNLQMAMDLLAAALACARNAAV
Ga0163163_124028181	3300014325	Switchgrass Rhizosphere	MSTPSVQVETRGAVALVTLNRPDSANTLNLETAMDLLAAAMTCARNPA
Ga0182032_116053471	3300016357	Soil	MSAPAVQVETRGAVALVTLNRPESGNAINLQVAMDLLAAAMT
Ga0182037_100468926	3300016404	Soil	MSAPAVQVETRGAVALVTLNRPESGNALNLQVAMDLLAAAMT
Ga0182744_12492222	3300017553	Compost	MSAETVEVESRGAVAIVTINRPDASNTLNLQTAMDLLAAAMTCGRNSAV
Ga0187824_101437963	3300017927	Freshwater Sediment	MSAPSVQVETRGAVALVTLNRPESGNALNLRMAMDLLAAAMTCAR
Ga0187825_101986121	3300017930	Freshwater Sediment	MSAPSVQVETRGAVALVTLNRPESGNALNLRMAMDLLAAAMT
Ga0187809_103293871	3300017937	Freshwater Sediment	MSAPSVQVETRGAVALVTLNRPESGNALNLRMAMDLL
Ga0187778_101761821	3300017961	Tropical Peatland	MSASTVSVDTRGAVAIITLNRPDNANTLNLQMGMDLLA
Ga0187776_104603261	3300017966	Tropical Peatland	VSVPSVQLETRGAVALVTLNRPDHSNTLNLQMAMDLLAAAMAC
Ga0187783_113865541	3300017970	Tropical Peatland	VSAPSVQVETRGAVALVTLNRPDNGNAINLQMAMDLLAAALTCAGNTSVR
Ga0187781_110682042	3300017972	Tropical Peatland	MAAPAVQVETRGAVALVTLNRPDSGNALNLQMAMDLLA
Ga0187780_100416581	3300017973	Tropical Peatland	MSAASVQVETHGAVALVTLNRPEHSNTLNLQMAMDLLAAAMACARNAAVRA
Ga0190272_126007871	3300018429	Soil	MSTSTIDVETRGAVALVTINRPDSSNTLNLQVAMDLLAAA
Ga0066655_100167231	3300018431	Grasslands Soil	MAAATVEVETRGAVALVTLNRPESANTLNLQMAMDLLAAAMTCARNAA
Ga0210399_114840052	3300020581	Soil	MSAPSVQVETHGAVALVTLNRPEHSNTLNLQMAMDLLA
Ga0210406_108536201	3300021168	Soil	MSTSSVQVETRGAVALVTLNRPDSSNTLNLEMAMDLLAAAMTCGRNPA
Ga0210408_110852372	3300021178	Soil	VSTASVQVETHGAVALVRLNRPEHANTLNLQMAMDLLAAAMACAR
Ga0210388_110703063	3300021181	Soil	VAAPTVQVETRGAVALVTLNRPESANTLNLQMGMDLLAAALACA
Ga0210393_101670631	3300021401	Soil	VAAPTVQVETRGAVALVTLNRPESANTLNLQMGMDLLAAALAC
Ga0210385_113750111	3300021402	Soil	MSAPTVQVETRGAVALVTLNRPDSANTLNLQMAMDLLA
Ga0210389_115588271	3300021404	Soil	VSAPTVQVETRGAVALVTLNRPESANTLNLQMGMDLLAAAL
Ga0210383_102655271	3300021407	Soil	MSAPSVQVETHGAVALVTLNRPEHSNTLNLQMAMDLLAAAMAC
Ga0242658_12234252	3300022530	Soil	MSAPNVHVETRGPVALISLNRPESANTINLQTAMDLLAA
Ga0247758_10434823	3300023079	Plant Litter	MSAPSVQVESRGAVAVVTINRPDVSNTLNLQTAMDLLAA
Ga0247771_11506952	3300023267	Plant Litter	MSAPSVQVESRGAVAVVTINRPDVSNTLNLQTAMDL
Ga0247784_10163264	3300023270	Plant Litter	MSAPTVQVESRGPVAVITLNRPDVSNTLNLQTAMDLLAAAMTCGRNSAV
Ga0209341_103467983	3300025325	Soil	MSQSTVNVETRGAVALVTIDRPDDANTLNVQVGMD
Ga0207680_113744881	3300025903	Switchgrass Rhizosphere	MSTSSVQVETRGAVAVVTLNRPESSNTLNLEMAMDLLAAAM
Ga0207671_105180223	3300025914	Corn Rhizosphere	MSAPSVQVETRGRVALVTLNRPDSSNTINLQMAMDLLAAAM
Ga0207700_117797062	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MSTPSVQVETRGAVALVTLNRPDGANTLNLEMAMDLLAAAMTCGRNP
Ga0207711_104367241	3300025941	Switchgrass Rhizosphere	VSAPTVQVETRGAVALVTLNRPENANTLNLQMAMDLLAAALACARNAAVR
Ga0209236_11469131	3300026298	Grasslands Soil	MAAATVEVETRGAVAVVTLNRPQSANTLNLQMAMDLLAAAMTC
Ga0179593_11437291	3300026555	Vadose Zone Soil	MAPASVEVETRGAVALVTLNRPQSSNTLNLQMAMDLLAAAMTCA
Ga0179593_17793991	3300026555	Vadose Zone Soil	MAPASVEVRTRGAVAMGTLKPHAAPKRPLQMSMDLLAAAMTCAATPR
Ga0207505_1037942	3300027459	Soil	VAAPSVQVETRGAVALVTLNRPDSANTLNLQMAMDLLA
Ga0209420_11999911	3300027648	Forest Soil	MSTATVNVETRGAVAVVTLNRPAQSNTLSLQMGMDLLAA
Ga0209380_103479163	3300027889	Soil	MATATVEVETQGAVALVTLNRPDSNNTLNLQMAMDLLAAS
Ga0209168_101929221	3300027986	Surface Soil	MSVPSVQVETRGPVALVTLNRPDSANTINLQMAMDL
Ga0308309_116045362	3300028906	Soil	MSTATVDVETRGAVAIVTLNRPAQSNTLSLQMGMDLLAAAMTCARSTAV
Ga0311339_115099561	3300029999	Palsa	MTNSSVYVETSGAAALVTLNRPDSANTLDLQAAMDLLSVAMTCARNPTVRV
Ga0302179_101101581	3300030058	Palsa	MSTATVDVETRGAVAIVTLNRPAQSNTLSLQMGMDLLAAAMTCARS
Ga0302311_101523081	3300030739	Palsa	MSAPTVQVETRGPVALVRLNRPESSNAINLQMAMDLLAAAMT
Ga0170834_1047040383	3300031057	Forest Soil	VSTASVQVETHGAVALVTLNRPEHSNTLNLQMARA
Ga0170823_149386721	3300031128	Forest Soil	MSTPSVQVETRGAVALVTLNRPESANTLNLQMGMDL
Ga0307508_103036574	3300031616	Ectomycorrhiza	MSTPSVQVETRGPVALVRLNRPESSNTINLQMAMDLLAAAMTCARNNNV
Ga0318496_106416942	3300031713	Soil	VSAPTVQVETRGSVALVTFNRPESGNTLNLQMAMDLLAAAMTCARNAA
Ga0318493_101079521	3300031723	Soil	MSAPAVQVETRGAVALVTLNRPESGNALNLQVAMDLLAAAMTCARN
Ga0318493_107236421	3300031723	Soil	MSAPAVQVETHGAVALVILNRPESGNAINLQVAMDLL
Ga0307468_1009216111	3300031740	Hardwood Forest Soil	VSAPTVQVETRGAVALVTLNRPENANTLNLQMAMDL
Ga0306918_115123561	3300031744	Soil	MSAPAVQVETRGAVALVTLNRPESGNALNLQVAMDLLAAAM
Ga0318492_101463524	3300031748	Soil	MSAPAVQVETRGAVALVILNRPESGNALNLRVAMDLLAAAMTCARNAA
Ga0318494_102392314	3300031751	Soil	MSAPAVQVETRGAVALVILDRPESGNALNLQVAMDLLA
Ga0318535_105428692	3300031764	Soil	MSAATVQVETHGAVALVTLNRPDNSNTLNLQMAMDLLAAALTCARNAAVR
Ga0318509_100563551	3300031768	Soil	MSAPVVQVETRGAVALVTLNRPESGNALNLQVAMDLL
Ga0318521_102653421	3300031770	Soil	VSAPTVQVETRGSVALVTFNRPESGNTLNLQMAMDLLAA
Ga0310917_101471781	3300031833	Soil	MSAPAVQVETRGAVALVTLNRPESGNALNLQVAMDLL
Ga0318517_102018031	3300031835	Soil	MSAPAVQVETHGAVALVILNRPESGNAINLQVAMDLLAAAMTCARN
Ga0318511_100715451	3300031845	Soil	MSAPAVQVETHGAVALVILNRPESGNAINLQVAMDLLAAAMTCARNAAVRA
Ga0306925_111362121	3300031890	Soil	MSAPAVQVETRGAVALVILNRPESGNALNLQVAMD
Ga0318522_103453411	3300031894	Soil	MSAPAVQVETRGAVALVILNRPESGNALNLRVAMDLL
Ga0310913_103476054	3300031945	Soil	MSAPAVQVETRGAVALVILNRPESGNALNLRVAMDLLAAAMTC
Ga0310909_110594211	3300031947	Soil	MSAPAVQVETRGAVALVTLNRPESGNAINLQVAMDLLAAAMTCARNAAVR
Ga0307479_111064143	3300031962	Hardwood Forest Soil	MSAPVVQVDTRGAVALVTLNRPDSGNALNLQVAMDL
Ga0318549_100213055	3300032041	Soil	MSAPAVQVETHGAVALVILNRPESGNAINLQVAMDLLAAAMTCARNAAVR
Ga0318533_102508794	3300032059	Soil	MSAPVVQVETRGAVALVTLNRPDSGNALNLQVAMDLLAAA
Ga0306920_1002761601	3300032261	Soil	MSAPAVQVETRGAVALVILNRPDSGNALNLQVAMDLLAAAMT
Ga0335085_100731377	3300032770	Soil	MSAPSVQVETRGAVALVTLSRPESANTLNLQMAMDLLAAAL
Ga0335079_116335293	3300032783	Soil	MSASTVEVDTRGAVTIITLNRPDDGNALNLQMGMD
Ga0335080_102040745	3300032828	Soil	MSAPSVQVETRGAVALVTLNRPESANTLNLQMGMDLLAAALACARNAEVR
Ga0335081_104872404	3300032892	Soil	MSAPSVQVETRGAVALVTLNRPESANTLNLQMAMDLLAA
Ga0335072_109405101	3300032898	Soil	MSAPCVHVETRGPVALVRLNRPESANTIDLQTAMDLLAAAMTCSRN
Ga0335076_100578511	3300032955	Soil	VSVASVQVETHGAVALVTLNRPEHSNTLNLQMAMDLLAAA
Ga0310811_114560821	3300033475	Soil	MSAPSVQVETRGPVALVTLNRPESSNTLNLQMAMDLLAA

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.37
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.37
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F092819

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


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