Metagenome Family F092768

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F092768
Family Type	Metagenome
Number of Sequences	107
Average Sequence Length	69 residues
Representative Sequence	MRCSFCILMVLGDLLDDGELLFVEAVPTSEAARQRIEALAALLPGQYVIYNKETGQRLSITAGVEG
Number of Associated Samples	67
Number of Associated Scaffolds	103

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	55.14 %
% of genes near scaffold ends (potentially truncated)	25.23 %
% of genes from short scaffolds (< 2000 bps)	81.31 %
Associated GOLD sequencing projects	57
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.66

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (94.393 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (28.037 % of family members)
Environment Ontology (ENVO)	Unclassified (40.187 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (85.047 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 18.09% β-sheet: 29.79% Coil/Unstructured: 52.13%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.66
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.66
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF13505	OMP_b-brl	4.85
PF16640	Big_3_5	4.85
PF01555	N6_N4_Mtase	3.88
PF07238	PilZ	2.91
PF14559	TPR_19	1.94
PF05726	Pirin_C	1.94
PF02678	Pirin	1.94
PF02353	CMAS	0.97
PF06197	DUF998	0.97
PF13649	Methyltransf_25	0.97
PF10282	Lactonase	0.97
PF07676	PD40	0.97
PF13181	TPR_8	0.97
PF00809	Pterin_bind	0.97
PF04555	XhoI	0.97
PF08924	DUF1906	0.97
PF13414	TPR_11	0.97
PF00067	p450	0.97
PF04191	PEMT	0.97
PF13565	HTH_32	0.97
PF07362	CcdA	0.97
PF02384	N6_Mtase	0.97
PF12847	Methyltransf_18	0.97

COG ID	Name	Functional Category	% Frequency in 103 Family Scaffolds
COG0863	DNA modification methylase	Replication, recombination and repair [L]	3.88
COG1041	tRNA G10 N-methylase Trm11	Translation, ribosomal structure and biogenesis [J]	3.88
COG1741	Redox-sensitive bicupin YhaK, pirin superfamily	General function prediction only [R]	3.88
COG2189	Adenine specific DNA methylase Mod	Replication, recombination and repair [L]	3.88
COG2124	Cytochrome P450	Defense mechanisms [V]	0.97
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	0.97
COG2227	2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase	Coenzyme transport and metabolism [H]	0.97
COG2230	Cyclopropane fatty-acyl-phospholipid synthase and related methyltransferases	Lipid transport and metabolism [I]	0.97
COG3371	Uncharacterized membrane protein	Function unknown [S]	0.97
COG5302	Post-segregation antitoxin (ccd killing mechanism protein) encoded by the F plasmid	Mobilome: prophages, transposons [X]	0.97

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	95.33 %
Unclassified	root	N/A	4.67 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	95.33 %
Unclassified	root	N/A	4.67 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	94.39 %
Unclassified	root	N/A	4.67 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	70.09 %
Unclassified	root	N/A	4.67 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.87 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.93 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	46.73 %
Unclassified	root	N/A	4.67 %
Stenosarchaea group	clade	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group	0.93 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	46.73 %
Unclassified	root	N/A	4.67 %
Nevskiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	0.93 %
Methanomicrobia	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia	0.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	46.73 %
Unclassified	root	N/A	4.67 %
Methanotrichales	order	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales	0.93 %
Sinobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae	0.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	46.73 %
Unclassified	root	N/A	4.67 %
Methanotrichaceae	family	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae	0.93 %
Nevskia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia	0.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	46.73 %
Unclassified	root	N/A	4.67 %
Nevskia soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	0.93 %
Methanothrix	genus	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004633\|Ga0066395_10076307	All Organisms → cellular organisms → Bacteria	1557	Open in IMG/M
3300005175\|Ga0066673_10370272	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	836	Open in IMG/M
3300005179\|Ga0066684_10044004	All Organisms → cellular organisms → Bacteria	2524	Open in IMG/M
3300005179\|Ga0066684_10165908	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1410	Open in IMG/M
3300005179\|Ga0066684_10323721	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1027	Open in IMG/M
3300005180\|Ga0066685_10088881	All Organisms → cellular organisms → Bacteria	2049	Open in IMG/M
3300005187\|Ga0066675_10211802	All Organisms → cellular organisms → Bacteria	1367	Open in IMG/M
3300005187\|Ga0066675_10585034	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	838	Open in IMG/M
3300005332\|Ga0066388_100379972	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2059	Open in IMG/M
3300005332\|Ga0066388_102863584	All Organisms → cellular organisms → Bacteria → Acidobacteria	882	Open in IMG/M
3300005332\|Ga0066388_104007993	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	751	Open in IMG/M
3300005332\|Ga0066388_104276546	All Organisms → cellular organisms → Bacteria → Acidobacteria	728	Open in IMG/M
3300005451\|Ga0066681_10722288	Not Available	605	Open in IMG/M
3300005537\|Ga0070730_10005375	All Organisms → cellular organisms → Bacteria	11070	Open in IMG/M
3300005542\|Ga0070732_10002500	All Organisms → cellular organisms → Bacteria	9923	Open in IMG/M
3300005560\|Ga0066670_10464760	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	779	Open in IMG/M
3300005566\|Ga0066693_10116686	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	977	Open in IMG/M
3300005587\|Ga0066654_10350152	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	802	Open in IMG/M
3300006032\|Ga0066696_10174307	All Organisms → cellular organisms → Bacteria	1357	Open in IMG/M
3300006032\|Ga0066696_10245312	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1156	Open in IMG/M
3300006163\|Ga0070715_10836778	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300006755\|Ga0079222_10640979	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	823	Open in IMG/M
3300006755\|Ga0079222_11437594	All Organisms → cellular organisms → Bacteria → Acidobacteria	641	Open in IMG/M
3300006794\|Ga0066658_10165134	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1139	Open in IMG/M
3300006797\|Ga0066659_10950776	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	718	Open in IMG/M
3300006806\|Ga0079220_10072030	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1706	Open in IMG/M
3300006806\|Ga0079220_10081425	All Organisms → cellular organisms → Bacteria → Proteobacteria	1627	Open in IMG/M
3300006806\|Ga0079220_10145418	All Organisms → cellular organisms → Bacteria → Acidobacteria	1299	Open in IMG/M
3300006903\|Ga0075426_10005098	All Organisms → cellular organisms → Bacteria	9298	Open in IMG/M
3300006954\|Ga0079219_10560416	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	822	Open in IMG/M
3300009088\|Ga0099830_10720872	All Organisms → cellular organisms → Bacteria → Acidobacteria	821	Open in IMG/M
3300009089\|Ga0099828_10234662	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1642	Open in IMG/M
3300009137\|Ga0066709_100526831	All Organisms → cellular organisms → Bacteria	1669	Open in IMG/M
3300009137\|Ga0066709_100637007	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1524	Open in IMG/M
3300010047\|Ga0126382_12501511	All Organisms → cellular organisms → Bacteria → Acidobacteria	503	Open in IMG/M
3300010048\|Ga0126373_10077372	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3022	Open in IMG/M
3300010048\|Ga0126373_10199555	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1938	Open in IMG/M
3300010048\|Ga0126373_10853690	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	974	Open in IMG/M
3300010048\|Ga0126373_11146470	All Organisms → cellular organisms → Bacteria → Acidobacteria	843	Open in IMG/M
3300010048\|Ga0126373_11397975	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	765	Open in IMG/M
3300010048\|Ga0126373_11720335	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	691	Open in IMG/M
3300010303\|Ga0134082_10102458	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1134	Open in IMG/M
3300010321\|Ga0134067_10005567	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3372	Open in IMG/M
3300010321\|Ga0134067_10005567	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3372	Open in IMG/M
3300010322\|Ga0134084_10072558	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1054	Open in IMG/M
3300010358\|Ga0126370_10139376	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1751	Open in IMG/M
3300010358\|Ga0126370_10249989	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1375	Open in IMG/M
3300010358\|Ga0126370_12263109	Not Available	537	Open in IMG/M
3300010358\|Ga0126370_12295548	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	534	Open in IMG/M
3300010359\|Ga0126376_12445994	Not Available	569	Open in IMG/M
3300010360\|Ga0126372_10492829	All Organisms → cellular organisms → Bacteria → Acidobacteria	1148	Open in IMG/M
3300010360\|Ga0126372_10617645	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1043	Open in IMG/M
3300010360\|Ga0126372_10983279	All Organisms → cellular organisms → Bacteria → Acidobacteria	854	Open in IMG/M
3300010361\|Ga0126378_10062138	All Organisms → cellular organisms → Bacteria → Acidobacteria	3537	Open in IMG/M
3300010361\|Ga0126378_11076796	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	905	Open in IMG/M
3300010361\|Ga0126378_11977330	All Organisms → cellular organisms → Bacteria → Acidobacteria	664	Open in IMG/M
3300010361\|Ga0126378_12476702	All Organisms → cellular organisms → Bacteria → Acidobacteria	593	Open in IMG/M
3300010366\|Ga0126379_10167697	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2071	Open in IMG/M
3300010366\|Ga0126379_13820483	All Organisms → cellular organisms → Bacteria → Acidobacteria	505	Open in IMG/M
3300010376\|Ga0126381_100026732	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6837	Open in IMG/M
3300010376\|Ga0126381_100813401	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1342	Open in IMG/M
3300010376\|Ga0126381_104444228	All Organisms → cellular organisms → Bacteria → Acidobacteria	542	Open in IMG/M
3300010868\|Ga0124844_1121462	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	997	Open in IMG/M
3300011270\|Ga0137391_11056165	All Organisms → cellular organisms → Bacteria	659	Open in IMG/M
3300012189\|Ga0137388_11135377	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix	718	Open in IMG/M
3300012210\|Ga0137378_10042142	All Organisms → cellular organisms → Bacteria	4088	Open in IMG/M
3300012948\|Ga0126375_11691309	All Organisms → cellular organisms → Bacteria → Acidobacteria	548	Open in IMG/M
3300012971\|Ga0126369_10001715	All Organisms → cellular organisms → Bacteria	15328	Open in IMG/M
3300012971\|Ga0126369_11844983	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	693	Open in IMG/M
3300012975\|Ga0134110_10047826	All Organisms → cellular organisms → Bacteria	1686	Open in IMG/M
3300012975\|Ga0134110_10047826	All Organisms → cellular organisms → Bacteria	1686	Open in IMG/M
3300012977\|Ga0134087_10106849	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1178	Open in IMG/M
3300014157\|Ga0134078_10093421	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1114	Open in IMG/M
3300014157\|Ga0134078_10093421	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1114	Open in IMG/M
3300014166\|Ga0134079_10325449	All Organisms → cellular organisms → Bacteria → Acidobacteria	691	Open in IMG/M
3300015356\|Ga0134073_10378371	All Organisms → cellular organisms → Bacteria → Acidobacteria	528	Open in IMG/M
3300016357\|Ga0182032_11521532	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	581	Open in IMG/M
3300017930\|Ga0187825_10306650	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	593	Open in IMG/M
3300018433\|Ga0066667_10282834	Not Available	1278	Open in IMG/M
3300018482\|Ga0066669_10645348	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	931	Open in IMG/M
3300021046\|Ga0215015_10057888	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	579	Open in IMG/M
3300021476\|Ga0187846_10057347	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1713	Open in IMG/M
3300021560\|Ga0126371_10113166	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2724	Open in IMG/M
3300021560\|Ga0126371_12064127	All Organisms → cellular organisms → Bacteria → Acidobacteria	686	Open in IMG/M
3300021560\|Ga0126371_13736290	All Organisms → cellular organisms → Bacteria → Acidobacteria	513	Open in IMG/M
3300026312\|Ga0209153_1261907	All Organisms → cellular organisms → Bacteria → Acidobacteria	554	Open in IMG/M
3300026330\|Ga0209473_1106829	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1167	Open in IMG/M
3300026523\|Ga0209808_1048547	All Organisms → cellular organisms → Bacteria	1952	Open in IMG/M
3300026523\|Ga0209808_1048547	All Organisms → cellular organisms → Bacteria	1952	Open in IMG/M
3300026540\|Ga0209376_1211254	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	871	Open in IMG/M
3300026542\|Ga0209805_1240782	All Organisms → cellular organisms → Bacteria → Acidobacteria	725	Open in IMG/M
3300026547\|Ga0209156_10081606	All Organisms → cellular organisms → Bacteria	1637	Open in IMG/M
3300026547\|Ga0209156_10343064	All Organisms → cellular organisms → Bacteria → Acidobacteria	651	Open in IMG/M
3300026550\|Ga0209474_10155878	All Organisms → cellular organisms → Bacteria	1484	Open in IMG/M
3300026550\|Ga0209474_10182371	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1349	Open in IMG/M
3300027765\|Ga0209073_10113772	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	968	Open in IMG/M
3300027765\|Ga0209073_10169367	All Organisms → cellular organisms → Bacteria	816	Open in IMG/M
3300027842\|Ga0209580_10004386	All Organisms → cellular organisms → Bacteria	6016	Open in IMG/M
3300027857\|Ga0209166_10000253	All Organisms → cellular organisms → Bacteria → Acidobacteria	68530	Open in IMG/M
3300027874\|Ga0209465_10030399	Not Available	2541	Open in IMG/M
3300027875\|Ga0209283_10852271	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	555	Open in IMG/M
3300031820\|Ga0307473_10187077	All Organisms → cellular organisms → Bacteria	1217	Open in IMG/M
3300032180\|Ga0307471_100000265	All Organisms → cellular organisms → Bacteria	26053	Open in IMG/M
3300032180\|Ga0307471_100702958	All Organisms → cellular organisms → Bacteria → Acidobacteria	1175	Open in IMG/M
3300032180\|Ga0307471_101456603	All Organisms → cellular organisms → Bacteria	844	Open in IMG/M
3300032205\|Ga0307472_100014371	All Organisms → cellular organisms → Bacteria → Acidobacteria	4107	Open in IMG/M
3300032205\|Ga0307472_102600191	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	516	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.07%
Host-Associated	Host-Associated	0.93%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	98.13%
Aquatic	Environmental → Aquatic	0.93%
Plants	Host-Associated → Plants	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	97.20%
Freshwater	Environmental → Aquatic → Freshwater	0.93%
Cave	Environmental → Terrestrial → Cave	0.93%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	88.78%
Loam	Environmental → Terrestrial → Soil → Loam	8.41%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.93%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	48.60%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	26.17%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	7.48%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	6.54%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.54%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.93%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.93%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.93%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	28.04%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	22.43%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	10.28%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	7.48%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	6.54%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.61%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.61%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	3.74%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.74%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.93%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.93%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.93%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010868	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction)	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300017930	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300026312	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)	Environmental	Open in IMG/M
3300026330	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)	Environmental	Open in IMG/M
3300026523	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066395_100763073	3300004633	Tropical Forest Soil	LTVLGDLLDGGELRFVEAVQTFEAARQRIEALAQLEPGHYIIYNKETGERVSVTAGVEIPAHR*
Ga0066673_103702722	3300005175	Soil	MRCSFCILMVLGDLLDDGELQFVEAVQTLEDARQRIEALAALLPGEYVIYNKQTGERLCITAGVESRFGVFATRPLCPA*
Ga0066684_100440044	3300005179	Soil	MVLSDLLDGGELLFVEAVRTSEAARQRIEALAGLRPGQYVIYNKETNQRISVTAGVEG*
Ga0066684_101659081	3300005179	Soil	MFPVTTEFDRMRCSFCILIVHGDLLDDGELQFVEAVQTLEDARQRIEALAALLPGQYVIYNKQTGERLCITAGVESRFGVFATRPLCPA*
Ga0066684_103237212	3300005179	Soil	MRCSFCILMVLGDLLDDGELQFVEAVRTLDDARQRIEALAALLPGEYVIYNKQTGERLCITSGVESRFGVFAARPLCPA*
Ga0066685_100888811	3300005180	Soil	MVHGDLLDDGELQFVEAVQTLEDARQRIETLAALLPGQYVIYNKQTGERLCITAGVESRFGVFATRPLCPA*
Ga0066675_102118023	3300005187	Soil	MRRSFCILMVLGDLLDDGELLFVEPVQTSEAARQRIEALAALVLGEYVIYNKQTGERLSIPAGVEG*
Ga0066675_105850342	3300005187	Soil	MRCSFCILMVLGDLLDDGELQFVEAVQTLEDARQRIEALAALLPGQYVIYNKQTGERLCITAGVESRFGVFATRPLCPA*
Ga0066388_1003799723	3300005332	Tropical Forest Soil	MRLSFCILSVLGDLLDGGELHFVETVQTLEAARQRIKALAELRPGLYVIYNKETGERVSIMAGVGD*
Ga0066388_1028635842	3300005332	Tropical Forest Soil	MRLPFCILTVLGDLLDGGQLHFVEAAQTLEAATQRIKALAELKPGQYVIYNEETGEQISVIAGVQS*
Ga0066388_1040079932	3300005332	Tropical Forest Soil	MRSSFCILTVLGDLLDGGELLFVEAVQTLEAARQRIAALAELRPGQYIIYNEETGERVSIITGADS*
Ga0066388_1042765461	3300005332	Tropical Forest Soil	MRCSFCVLTVLGDLLDGGELQFVEAVQSLEDARQRIEALAESRPGQYIIYNDETGERVSVLAGVEG*
Ga0066681_107222881	3300005451	Soil	MRRSFCILMVHGDLLDDGELQFVEAVQTLEDARQRIETLAALLPGQYVIYNKQTGERLCITAGVESRF
Ga0070730_100053752	3300005537	Surface Soil	MRSHYCVLTVLGDLLDGGELHFVEAVQTLQAARQRIEALAELRPGQYVIYNKETGERLSITAGVES*
Ga0070732_100025009	3300005542	Surface Soil	MRCSFCILMVLGDLLDDGELLFVEAVETSEDARQRIEALAALLPGQYVIYNKETGQRLSITAGVEG*
Ga0066670_104647601	3300005560	Soil	MRCSFCILIVHGDLLDDGELQFVEAVQTLEDARQRIEALAALLPGEYVIYNKQTGERLCITSGVESRFGVFAARPLCPA*
Ga0066693_101166862	3300005566	Soil	MRCSFCILMVHGDLLDDGELQFVEAVQTLEDARQRIEALAALLPGEYVIYNKQTGERLCITAGVENRFGVFATRPLCPA*
Ga0066654_103501522	3300005587	Soil	MFPVTTEFDRMRCSFCILIVHGDLLDDGELQFVEAVQTLEDARQRIEALAALLPGEYVIYNKQTGERLCITSGVESRFGVFAARPLCPA*
Ga0066696_101743071	3300006032	Soil	FLLPPIRTEFDRKRCSFCIPMVLSDLLDGGELLFVEAVRTSEAARQRIEALAGLRPGQYVIYNKETNQRISVTAGVEG*
Ga0066696_102453123	3300006032	Soil	MVLGDLLDDGELQFVEAVRTLDDARQRIEALAALLPGEYVIYNKQTGERLCITAGVE
Ga0070715_108367783	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MPSSFCILMVLGDLLDGGELLFVEAVQTSEYARQRIEAPAAFKPGQYVIYNEETGQRLSI
Ga0079222_106409792	3300006755	Agricultural Soil	MRAHYCVLTVLGDLLDGGELHFVEAVQTFEAARQRIEALAELSPGQYVIYNKQTGERVSITAGVESRSEVVAVAHQTAHE*
Ga0079222_114375942	3300006755	Agricultural Soil	DGGELHFVEAVQTLEAARQRIEALAELKPGQYVIYNKETGERLSITAGAES*
Ga0066658_101651341	3300006794	Soil	MRRSFCILMVLGDLLDDGELLFVEAVQTLDDARQRIEALAAILPTQ
Ga0066659_109507761	3300006797	Soil	MRCSFCILMVLGDLLDDGELQFVEAVRTLDDARQRIEALAALLPGEYVIYNKQTGERLCITAGVENRFGVFAIRPLCPA*
Ga0079220_100720303	3300006806	Agricultural Soil	MRSQYCVLTVLGDLLDGGELHFVEAVQTLEAARQRIEALAELKPGQYVIYNKETGERLSITAGAES*
Ga0079220_100814253	3300006806	Agricultural Soil	MRSPFCILCVLGDLLDDGEVRFIEAVPTLEAARRRIEALAELLPGEYVIYNEETGERVLVVAGVED*
Ga0079220_101454181	3300006806	Agricultural Soil	MRYSFCILVVLGDLLDDGELLFVEAVETSEDARQRIEALAALLPGQYVIYNKETGQRLSITAGVEG*
Ga0075426_1000509811	3300006903	Populus Rhizosphere	MRCSFCILMVLGDLLDDGELLFVEAVPTSEAARQRIEALAALLPGQYVIYNKETGQRLSITAGVEG*
Ga0079219_105604161	3300006954	Agricultural Soil	MVPSQNEVWRMRAHYCVLTVLGDLLDGGELHFVEAVQTFEAARQRIEALAELSPGQYVIYNKQTGERVSITAGVESRSEVVAVAHQTAHE*
Ga0099830_107208721	3300009088	Vadose Zone Soil	MPCSFCILIVLGDLLDGGELLFVEAVQTPEAARQRIEALAAFRPGQYVIYNEETGQRLSITAGVER*
Ga0099828_102346623	3300009089	Vadose Zone Soil	VSDLLEGGELLFVEAVQTPEAGRQRIEALAAFRPGQYVIYNEETGERLSITAGVEG*
Ga0066709_1005268312	3300009137	Grasslands Soil	MLVGDLLDAGQLLFLEPVQTSEAARQRIEALAALVLGEYVIYNKQTGERLSIPAGVEG*
Ga0066709_1006370072	3300009137	Grasslands Soil	MRCSFCILIVHGDLLDDGELQFVEAVQTLEDARQRIEALAALLPGQYVIYNKQTGE
Ga0126382_125015111	3300010047	Tropical Forest Soil	MRSHYCVLTVLGDLLDGGELHFVEAVQTLEAARQRIEALAELEPGQYIIYNKETGERVSFTAGMEIPSRH*
Ga0126373_100773722	3300010048	Tropical Forest Soil	MSPVRTEFRGMRLSFCILSVLGDLLDGGELHFVEAVQTLEAARQRIEALAELRPGLYVIYNRETGERVSIMAGVED*
Ga0126373_101995552	3300010048	Tropical Forest Soil	VLGDLLDGGELRFVEAVQTLEAARQRIEALAELEPGQYIIYNKETGERVSIVAGAEVPLRR*
Ga0126373_108536902	3300010048	Tropical Forest Soil	MRSHYCVLTVLGDLLDGGELRFVEAVQTFEAARQRIEALAQLEPGHYIIYNKETGERVSVTAGVEIPAHR*
Ga0126373_111464701	3300010048	Tropical Forest Soil	SRVRTEFEGMRCHFCILTVLGDLLEGGELQFVEAVQTLEAARQRIAALAELRPGQYIIYNEETGERVSIIAGADS*
Ga0126373_113979752	3300010048	Tropical Forest Soil	MRSSFCILTVLGDLLDGGELLFVEAVQTLEAARQRIAALAELRPGQYIIYNEETGERVSIIAVAKS*
Ga0126373_117203351	3300010048	Tropical Forest Soil	SVLGDLLDGGELHFVETVQTLEAARQRIKALAELRPGLYVIYNKETGERVSIMAGVGD*
Ga0134082_101024583	3300010303	Grasslands Soil	MVLGDLLDDGELQFVEAVQTLEDARQRIEALAALLPGQYVIYNKQTGERLCITAGVESRFGVFATRPLCPA*
Ga0134067_100055673	3300010321	Grasslands Soil	MRCSFCILIVHGDLLDDGELQFVEAVRTLDDARQRIEALAALLPGEYVIYNKQTGERLCITAGVESRFGVFATRPLCPA*
Ga0134067_100055675	3300010321	Grasslands Soil	MVLGDLLDDGELLFVEPVQTSEAARQRIEALAALVLGEYVIYNKQTGERLSIPAGVEG*
Ga0134084_100725582	3300010322	Grasslands Soil	MVHGDLLDDGELQFVEAVQTLEDARQRIEALAALLPGQYVIYNKQTGERLCITAGVESRFGVFATRPLCPA*
Ga0126370_101393762	3300010358	Tropical Forest Soil	MRSHYCVLTVLGDLLDGGELRFVEAVQTFEAARQRIEALARLEPGHYIIYNKETGERVSVTAGVETPAHR*
Ga0126370_102499893	3300010358	Tropical Forest Soil	MRFPFCILTVLGDLLDGGELHFVEAAQTLEAATQRIKALAELKPGQYVIYNEETGEQISVIAGVQS*
Ga0126370_122631091	3300010358	Tropical Forest Soil	VLGDLLDGGELQFVEAVQSLEDAKQRIEALAELRPGQYIIYNDETGERVAVTAGVEV*
Ga0126370_122955481	3300010358	Tropical Forest Soil	SSFCILTVLGDLLDGGELLFVEAVQTLEAARQRIAALAELRPGQYIIYNEETGERVSIIAVAKS*
Ga0126376_124459942	3300010359	Tropical Forest Soil	MRSFFCILTVLGDLLNGGKLLFVEAVQTLEAARQRIAAPAELRPGQYIIYNEETGERDSIIVGAESRLLGIFPNGNGDLP*
Ga0126372_104928292	3300010360	Tropical Forest Soil	LLGDLLDGGELQFVEAVQSLEDAKQRIEALAESKPGQYIIYNDQTGERVSVLAGVEA*
Ga0126372_106176452	3300010360	Tropical Forest Soil	GVSRMRSPFCILIVLGDLLDGGELHFVEAAQTLEAATQRIKALAELKPGQYVIYNEETGEQISVIAGVQS*
Ga0126372_109832792	3300010360	Tropical Forest Soil	MSPVRTEFKGMRLSFCILSVLGDLLDGGELHFVETVQTLEAARQRIEALAELKPGLYVIYNRETGERVSIMAGVED*
Ga0126378_100621383	3300010361	Tropical Forest Soil	MRSSFCILTVLGDLLDGGELLFVEAVQTLEAARQRIAALAELRPGQYIIYNEETGERVSIIAGVVR*
Ga0126378_110767962	3300010361	Tropical Forest Soil	MRSHYCVLTVLGDLLDGGELHFVEAVQTLEAAKQRIEALAELEPGQYIIYNKETGERVSIVAGAEVPLRR*
Ga0126378_119773301	3300010361	Tropical Forest Soil	MRSHYCVLTVLGDLLDGGELHFVEAVQTLEAARQRIEALAESEPGQYIIYNKETGERVSFTAGMEIPSRH*
Ga0126378_124767021	3300010361	Tropical Forest Soil	MRFPFCILTVLGDLLDGGELQFVEAVQTIEAARQRISALAELRPGQYIIDDEETGERVSVIVGAEK*
Ga0126379_101676974	3300010366	Tropical Forest Soil	MSPVRTEFKGMRLSFCILSVLGDLLDGGELHFVETVQTLEAARQRIEALAELRPGLYVIYNKETGERVSIMAGVGD*
Ga0126379_138204831	3300010366	Tropical Forest Soil	MRSHYCVLTVLGDLLDGGELHFVEAVQTLEAARQRIEALAELEPGQYIIYNKETGERVSFTTGMEIPSRH*
Ga0126381_1000267322	3300010376	Tropical Forest Soil	VLGDLLDGGELHFVEAVQTLEAAKQRIEALAELEPGQYIIYNKETGERVSIVAGAEVPLRR*
Ga0126381_1008134012	3300010376	Tropical Forest Soil	MRLSFCILSVLGDLLDGGELHFVEAVQTLEAARQRIEALAELRPGLYVIYNRETGERVSIMAGVED*
Ga0126381_1044442282	3300010376	Tropical Forest Soil	MRSHYCVLTVLGDLLDGGELHFVEALQTLEAARQRIEALAELEPGQYIIYNKETGERVSFTVGMEIPSRH*
Ga0124844_11214622	3300010868	Tropical Forest Soil	GKHPYETFRGSNALFIMSPLRTEFKGMRLSFCILSVLGDLLDGGELHFVETVQTLEAARQRIKALAELRPGLYVIYNKETGERVSIMAGVGD*
Ga0137391_110561652	3300011270	Vadose Zone Soil	GDLLDGGELLFVEAVQIPEAARQRIEAPAAFRPGQYVIYNEETGQRLSITAGVEG*
Ga0137388_111353771	3300012189	Vadose Zone Soil	ISEGAALSLMPPVRTESDRIGRSFCILIVLGDLLDDGELLFVEAVQTPEDARQRIEALAAFRPGQCVIYNKETGQRLSITAGVEG*
Ga0137378_100421427	3300012210	Vadose Zone Soil	LLDDGELQFVEAVQTSEAAKQRIEALAALLPGQYVIYNKETGQRLFIAAGLEG*
Ga0126375_116913091	3300012948	Tropical Forest Soil	MSPVRTEFKGMRLSFCILSVLGDLLDGGELHFVETVQTLEAARQRIKALAELRPGLYVIYNK
Ga0126369_100017151	3300012971	Tropical Forest Soil	QNGVWRMRSHYCVLTVLGDLLDGGELRFVEAVQTFEAARQRIEALARLEPGHYIIYNKETGERVSVTAGVETPAHR*
Ga0126369_118449831	3300012971	Tropical Forest Soil	MRFPFCILTVLGDLLDGGELHFVEAAQTLEAATQRIKALAELKPGQYVIYNEETGEQISVVAGVQS*
Ga0134110_100478261	3300012975	Grasslands Soil	MVLGDLLDDGELQFVEAVRTLDDARQRIEALAALLPGEYVIYNKQTGERLCITSGVESRFGVFATRPLCPA*
Ga0134110_100478263	3300012975	Grasslands Soil	MVLGDLLDDGELLFVEAVRTSEAARQRIEALAALVLGEYVIYNKQTGERLSIPAGVEG*
Ga0134087_101068493	3300012977	Grasslands Soil	MRCSFCILIVHGDLLDDGELQFVEAVQTLEDARQRIEALAALLPGQYVIYNKQTGERLCITAGVESRFGVFATRPLCPA*
Ga0134078_100934211	3300014157	Grasslands Soil	MVLGDLLDDGELLFVEAVQTLDDARQRIEALAAILPTQYVIYNKETGQRLSVTAGVEG*
Ga0134078_100934213	3300014157	Grasslands Soil	TEFDKMRRSFCILMVHGDLLDDGELQFVEAVQTLEDARQRIETLAALLPGQYVIYNKQTGERLCITAGVESRFGVFATRPLCPA*
Ga0134079_103254491	3300014166	Grasslands Soil	MVLGDLLDDGELLFVEAVRTSEAARQRIEALAVLVLGEYVIYNKQTGERLSIPACVEG*
Ga0134073_103783711	3300015356	Grasslands Soil	MVHGDLLDDGELQFVEAVRTLDDARQRIEALAALLPGEYVIYNKQTGERLSIPAGVEG*
Ga0182032_115215321	3300016357	Soil	MRCSFCVLTVLGDLLDGGELQFVEAVPSLEDAKRRIEALAESKPGQYIIYNDETG
Ga0187825_103066502	3300017930	Freshwater Sediment	MRCSFCILIVLGDLLDGGELLFVEAVQTPEDAKQRIEALAAFRPGQYVIYNEETGERLSITAGVEG
Ga0066667_102828342	3300018433	Grasslands Soil	MRRSFCILMVLGDLLDDGELLFVEAVRTSEAARQRIEALAGLRPGQYVIYNKETNQRISVTAGVEG
Ga0066669_106453482	3300018482	Grasslands Soil	MRRSFCILMVLGDLLDDGELLFVEPVQTSEAARQRIEALAALVLGEYVIYNKQTGERLSIPAGVEG
Ga0215015_100578882	3300021046	Soil	LVVRPPFGVCMRLPFCILRTLGDVLDGGELHFTEAARTVEAARRRIKTLAELWPGQYVIYNEQTGERLSITASGQTKN
Ga0187846_100573471	3300021476	Biofilm	MRSSFCILTVLGDLPDDGELQFVGAVQTLEIARQRIEIMAEHRPGRYVIYNGETGERIKGVEG
Ga0126371_101131662	3300021560	Tropical Forest Soil	MRLSFCILSVLGDLLDGGELHFVEAVQTLEAARQRIEALAELRPGLYVIYNRETGERVSIMAGVED
Ga0126371_120641272	3300021560	Tropical Forest Soil	MVPSQNGVRRVRSHYCVLTVLGDLLDGGELHFVEAVQTLEAAKQRIEALAELEPGQYIIYNKETGERVSIVAGAEVPLRL
Ga0126371_137362901	3300021560	Tropical Forest Soil	MRCSFCILTVLGDLLDGGELQFVEAVQTIEAARQRISALAELRPGQYIIYDEETGERVSVIVGAEK
Ga0209153_12619071	3300026312	Soil	MPPVRTEFDRMRCSFCILIVHGDLLDDGELQFVEAVQTLEDARQRIEALAALLPGQYVIYNKQTGERLCITAGVESRFGVFATRPLCPA
Ga0209473_11068292	3300026330	Soil	MRCSFCILMVLGDLLDDGELQFVEAVRTLDDARQRIEALAALLPGEYVIYNKQTGERLCITAGVENRFGVFATRPLCPA
Ga0209808_10485472	3300026523	Soil	MRRSFCILMVLGDLLDDGELLFVEAVRTSEAARQRIEALAALVLGEYVIYNKQTGERLSIPAGVEG
Ga0209808_10485474	3300026523	Soil	MFPVTTEFDRMRCSFCILIVHGDLLDDGELQFVEAVQTLEDARQRIEALAALLPGQYVIYNKQTGERLCITAGVESRFGVFATRPLCPA
Ga0209376_12112542	3300026540	Soil	MPPVRTEFDKMRRSFCILMVHGDLLDDGELQFVEAVQTLEDARQRIETLAALLPGQYVIYNKQTGERLCITAGVESRFGVFATRPLCPA
Ga0209805_12407821	3300026542	Soil	MVLGDLLDDGELQFVEAVRTLDDARQRIEALAALLPGEYVIYNKQTGERLCITSGVESRFGVFAARPLCPA
Ga0209156_100816063	3300026547	Soil	MVLSDLLDGGELLFVEAVRTSEAARQRIEALAALVLGEYVIYNKQTGERLSIPAGVEG
Ga0209156_103430642	3300026547	Soil	MVLGDLLDDGELQFVEAVQTLEDARQRIEALAALLPGEYVIYNKQTGERLCITAGVENRFGVFATRPLCPA
Ga0209474_101558782	3300026550	Soil	FETISEGTALFLLPPIRTEFDRKRCSFCIPMVLSDLLDGGELLFVEAVRTSEAARQRIEALAGLRPGQYVIYNKETNQRISVTAGVEG
Ga0209474_101823712	3300026550	Soil	MRCSFCILIVLGDLLDDGELQFVEAVRTLDDARQRIEALAALLPGEYVIYNKQTGERLCITSGVESRFGVFAARPLCPA
Ga0209073_101137722	3300027765	Agricultural Soil	MVPSQNGVWRMRSQYCVLTVLGDLLDGGELHFVEAVQTLEAARQRIEALAELKPGQYVIYNKETGERLSITAGAES
Ga0209073_101693671	3300027765	Agricultural Soil	MRSPFCILCVLGDLLDDGEVRFIEAVPTLEAARRRIEALAELLPGEYVIYNEETGERVLVVAGVED
Ga0209580_100043864	3300027842	Surface Soil	MSRVRTEFDRMRCSFCILMVLGDLLDDGELLFVEAVETSEDARQRIEALAALLPGQYVIYNKETGQRLSITAGVEG
Ga0209166_1000025352	3300027857	Surface Soil	MRSHYCVLTVLGDLLDGGELHFVEAVQTLQAARQRIEALAELRPGQYVIYNKETGERLSITAGVES
Ga0209465_100303994	3300027874	Tropical Forest Soil	VLTVLGDLLDGGELRFVEAVQTFEAARQRIEALAQLEPGHYIIYNKETGERVSVTAGVEIPAHR
Ga0209283_108522711	3300027875	Vadose Zone Soil	APVSDLLEGGELLFVEAVQTPEAGRQRIEALAAFRPGQYVIYNEETGERLSITAGVEG
Ga0307473_101870772	3300031820	Hardwood Forest Soil	MPSSFCILMVLGDLLDGGELLFVEAVQTSEYARQRIEAPAAFKPGQYVIYNEETGQ
Ga0307471_1000002653	3300032180	Hardwood Forest Soil	MPGSFCILVVLGDLLDDGELLFVEAVETSEDARQRIEALAALLPGQYVIYIKETGQRLSITAGVEG
Ga0307471_1007029582	3300032180	Hardwood Forest Soil	MVLGDLLDDGELLFVEAVQTSEAARQRIEALAALLPGQYVIYNKETGDRLFIAAGLEG
Ga0307471_1014566032	3300032180	Hardwood Forest Soil	MVLGDLLDGGELLFVEAVQTSEYARQRIEAPAAFKPGQYVIYNEETGQRLSITAGVER
Ga0307472_1000143712	3300032205	Hardwood Forest Soil	MPSSFCILMVLGDLLDGGELLFVEAVQTSEYARQRIETPAAFKPGQYVIYNEETGQRLSITAGVER
Ga0307472_1026001911	3300032205	Hardwood Forest Soil	MRCSFCILIVLGDLLDDGELLFVEAVPTSEAARQRIETLAALLPGQYVIYNKE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F092768

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences