Metagenome Family F092767

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F092767
Family Type	Metagenome
Number of Sequences	107
Average Sequence Length	100 residues
Representative Sequence	MATRRSAEEVEQVVQQYRASGLSQREFSQQTGIKLSTLGRYVRRDGRREAPQQLVRVKLEVPVEPDSGFVLMLGNGRRIASGWGFCDTALARLIRVAEQV
Number of Associated Samples	84
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	46.23 %
% of genes near scaffold ends (potentially truncated)	29.91 %
% of genes from short scaffolds (< 2000 bps)	87.85 %
Associated GOLD sequencing projects	78
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.45

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (93.458 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (9.346 % of family members)
Environment Ontology (ENVO)	Unclassified (33.645 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (44.860 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 36.72% β-sheet: 8.59% Coil/Unstructured: 54.69%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.45
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.45
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF05717	TnpB_IS66	60.75
PF13007	LZ_Tnp_IS66	14.95
PF01381	HTH_3	3.74
PF00072	Response_reg	0.93
PF01695	IstB_IS21	0.93
PF00135	COesterase	0.93
PF00155	Aminotran_1_2	0.93
PF01609	DDE_Tnp_1	0.93
PF07690	MFS_1	0.93
PF05598	DUF772	0.93
PF03966	Trm112p	0.93
PF12762	DDE_Tnp_IS1595	0.93
PF13619	KTSC	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG3436	Transposase	Mobilome: prophages, transposons [X]	60.75
COG1484	DNA replication protein DnaC	Replication, recombination and repair [L]	0.93
COG2272	Carboxylesterase type B	Lipid transport and metabolism [I]	0.93
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.93
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.93
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.93
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.93
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.93
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	93.46 %
Unclassified	root	N/A	6.54 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	93.46 %
Unclassified	root	N/A	6.54 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	93.46 %
Unclassified	root	N/A	6.54 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	59.81 %
Unclassified	root	N/A	6.54 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.74 %
Synergistetes	phylum	All Organisms → cellular organisms → Bacteria → Synergistetes	0.93 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	41.12 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	15.89 %
Unclassified	root	N/A	6.54 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	2.80 %
Synergistia	class	All Organisms → cellular organisms → Bacteria → Synergistetes → Synergistia	0.93 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	41.12 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	14.95 %
Unclassified	root	N/A	6.54 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2.80 %
Synergistales	order	All Organisms → cellular organisms → Bacteria → Synergistetes → Synergistia → Synergistales	0.93 %
Methylococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales	0.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	41.12 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	14.02 %
Unclassified	root	N/A	6.54 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	2.80 %
Bryobacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae	0.93 %
Synergistaceae	family	All Organisms → cellular organisms → Bacteria → Synergistetes → Synergistia → Synergistales → Synergistaceae	0.93 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	0.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	41.12 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	14.02 %
Unclassified	root	N/A	6.54 %
Cystobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	2.80 %
Methylomagnum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomagnum	0.93 %
unclassified Synergistaceae	no rank	All Organisms → cellular organisms → Bacteria → Synergistetes → Synergistia → Synergistales → Synergistaceae → unclassified Synergistaceae	0.93 %
Bryobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter	0.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	41.12 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	8.41 %
Unclassified	root	N/A	6.54 %
Myxococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae	2.80 %
Synergistaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Synergistetes → Synergistia → Synergistales → Synergistaceae → unclassified Synergistaceae → Synergistaceae bacterium	0.93 %
Methylomagnum ishizawai	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomagnum → Methylomagnum ishizawai	0.93 %
Bryobacter aggregatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	0.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	41.12 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	8.41 %
Unclassified	root	N/A	6.54 %
Myxococcus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → Myxococcus	2.80 %
Synergistaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Synergistetes → Synergistia → Synergistales → Synergistaceae → unclassified Synergistaceae → Synergistaceae bacterium	0.93 %
Methylomagnum ishizawai	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomagnum → Methylomagnum ishizawai	0.93 %
Bryobacter aggregatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	0.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	41.12 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	8.41 %
Unclassified	root	N/A	6.54 %
Myxococcus xanthus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → Myxococcus → Myxococcus xanthus	2.80 %
Synergistaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Synergistetes → Synergistia → Synergistales → Synergistaceae → unclassified Synergistaceae → Synergistaceae bacterium	0.93 %
Methylomagnum ishizawai	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomagnum → Methylomagnum ishizawai	0.93 %
Bryobacter aggregatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001213\|JGIcombinedJ13530_101385944	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	1043	Open in IMG/M
3300001305\|C688J14111_10046133	All Organisms → cellular organisms → Bacteria	1313	Open in IMG/M
3300001686\|C688J18823_10075111	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	2345	Open in IMG/M
3300002568\|C688J35102_117714183	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	501	Open in IMG/M
3300002568\|C688J35102_117825579	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300002568\|C688J35102_120333557	All Organisms → cellular organisms → Bacteria	996	Open in IMG/M
3300003432\|JGI20214J51088_10291618	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	1119	Open in IMG/M
3300003465\|P52013CM_1056189	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	902	Open in IMG/M
3300004463\|Ga0063356_102492107	All Organisms → cellular organisms → Bacteria	793	Open in IMG/M
3300004808\|Ga0062381_10420909	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300005336\|Ga0070680_101349529	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → Myxococcus → Myxococcus xanthus	617	Open in IMG/M
3300005336\|Ga0070680_101951819	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomagnum → Methylomagnum ishizawai	509	Open in IMG/M
3300005338\|Ga0068868_100857423	All Organisms → cellular organisms → Bacteria	823	Open in IMG/M
3300005364\|Ga0070673_101890359	All Organisms → cellular organisms → Bacteria	566	Open in IMG/M
3300005366\|Ga0070659_100979284	All Organisms → cellular organisms → Bacteria	742	Open in IMG/M
3300005367\|Ga0070667_101666193	All Organisms → cellular organisms → Bacteria	600	Open in IMG/M
3300005458\|Ga0070681_10641618	All Organisms → cellular organisms → Bacteria	977	Open in IMG/M
3300005458\|Ga0070681_11666729	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M
3300005466\|Ga0070685_10875552	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	667	Open in IMG/M
3300005531\|Ga0070738_10000843	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	75822	Open in IMG/M
3300005547\|Ga0070693_101652338	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → Myxococcus → Myxococcus xanthus	504	Open in IMG/M
3300005577\|Ga0068857_100746401	All Organisms → cellular organisms → Bacteria	932	Open in IMG/M
3300005578\|Ga0068854_101631203	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → Myxococcus → Myxococcus xanthus	588	Open in IMG/M
3300005587\|Ga0066654_10147399	All Organisms → cellular organisms → Bacteria	1192	Open in IMG/M
3300005587\|Ga0066654_10545479	All Organisms → cellular organisms → Bacteria	638	Open in IMG/M
3300005587\|Ga0066654_10816306	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	530	Open in IMG/M
3300005617\|Ga0068859_100863400	All Organisms → cellular organisms → Bacteria	991	Open in IMG/M
3300005841\|Ga0068863_102724575	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300005841\|Ga0068863_102724865	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300006163\|Ga0070715_10840162	All Organisms → cellular organisms → Bacteria	560	Open in IMG/M
3300006237\|Ga0097621_101513744	All Organisms → cellular organisms → Bacteria	637	Open in IMG/M
3300006237\|Ga0097621_101851430	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300006755\|Ga0079222_10280113	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1073	Open in IMG/M
3300006846\|Ga0075430_100362152	All Organisms → cellular organisms → Bacteria → Acidobacteria	1197	Open in IMG/M
3300007982\|Ga0102924_1208494	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	840	Open in IMG/M
3300009085\|Ga0105103_10088177	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1601	Open in IMG/M
3300009093\|Ga0105240_11145931	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	826	Open in IMG/M
3300009094\|Ga0111539_12504783	All Organisms → cellular organisms → Bacteria	598	Open in IMG/M
3300009165\|Ga0105102_10605039	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	606	Open in IMG/M
3300009430\|Ga0114938_1056256	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	1470	Open in IMG/M
3300009551\|Ga0105238_10480680	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1241	Open in IMG/M
3300009551\|Ga0105238_12780667	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	526	Open in IMG/M
3300009789\|Ga0126307_11536063	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	540	Open in IMG/M
3300010036\|Ga0126305_10196107	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1278	Open in IMG/M
3300010042\|Ga0126314_10220518	All Organisms → cellular organisms → Bacteria	1340	Open in IMG/M
3300010042\|Ga0126314_10364508	All Organisms → cellular organisms → Bacteria	1038	Open in IMG/M
3300010042\|Ga0126314_11511669	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	504	Open in IMG/M
3300010044\|Ga0126310_11665679	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	529	Open in IMG/M
3300010045\|Ga0126311_10948671	All Organisms → cellular organisms → Bacteria	701	Open in IMG/M
3300010045\|Ga0126311_11236634	Not Available	619	Open in IMG/M
3300010046\|Ga0126384_10102765	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2113	Open in IMG/M
3300010359\|Ga0126376_10108021	All Organisms → cellular organisms → Bacteria → Acidobacteria	2139	Open in IMG/M
3300010373\|Ga0134128_11163327	All Organisms → cellular organisms → Bacteria	851	Open in IMG/M
3300010399\|Ga0134127_10985502	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	902	Open in IMG/M
3300010401\|Ga0134121_12322337	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300012212\|Ga0150985_120805625	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	834	Open in IMG/M
3300012951\|Ga0164300_10126559	All Organisms → cellular organisms → Bacteria → Acidobacteria	1163	Open in IMG/M
3300012955\|Ga0164298_10811042	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	671	Open in IMG/M
3300012957\|Ga0164303_10507182	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	774	Open in IMG/M
3300012960\|Ga0164301_10692149	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	766	Open in IMG/M
3300012961\|Ga0164302_11422886	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	567	Open in IMG/M
3300012961\|Ga0164302_11623732	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	538	Open in IMG/M
3300012961\|Ga0164302_11653759	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	535	Open in IMG/M
3300012989\|Ga0164305_10037171	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2734	Open in IMG/M
3300013104\|Ga0157370_10564604	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	1043	Open in IMG/M
3300013105\|Ga0157369_10285081	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	1720	Open in IMG/M
3300013105\|Ga0157369_11121686	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	804	Open in IMG/M
3300013296\|Ga0157374_11615409	Not Available	672	Open in IMG/M
3300013297\|Ga0157378_10343696	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	1456	Open in IMG/M
3300013306\|Ga0163162_12188176	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	635	Open in IMG/M
3300013307\|Ga0157372_13259981	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	517	Open in IMG/M
3300013307\|Ga0157372_13263086	Not Available	517	Open in IMG/M
3300013308\|Ga0157375_11060364	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	948	Open in IMG/M
3300014325\|Ga0163163_10289000	All Organisms → cellular organisms → Bacteria → Synergistetes → Synergistia → Synergistales → Synergistaceae → unclassified Synergistaceae → Synergistaceae bacterium	1692	Open in IMG/M
3300014325\|Ga0163163_12258673	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	603	Open in IMG/M
3300014487\|Ga0182000_10207888	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	755	Open in IMG/M
3300014745\|Ga0157377_10824063	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	686	Open in IMG/M
3300014969\|Ga0157376_10427891	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	1286	Open in IMG/M
3300015357\|Ga0134072_10443773	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	522	Open in IMG/M
3300015371\|Ga0132258_10945549	All Organisms → cellular organisms → Bacteria	2177	Open in IMG/M
3300015372\|Ga0132256_103081234	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	560	Open in IMG/M
3300015372\|Ga0132256_103614770	Not Available	520	Open in IMG/M
3300015374\|Ga0132255_100527908	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1737	Open in IMG/M
3300015374\|Ga0132255_100829296	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1379	Open in IMG/M
3300015374\|Ga0132255_102380305	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	808	Open in IMG/M
3300015374\|Ga0132255_105925851	Not Available	517	Open in IMG/M
3300018084\|Ga0184629_10558622	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	588	Open in IMG/M
3300018433\|Ga0066667_10929306	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	749	Open in IMG/M
3300019487\|Ga0187893_10157318	All Organisms → cellular organisms → Bacteria	1834	Open in IMG/M
3300020147\|Ga0196976_1028094	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	1264	Open in IMG/M
3300022557\|Ga0212123_10371483	All Organisms → cellular organisms → Bacteria	970	Open in IMG/M
3300025914\|Ga0207671_10738152	All Organisms → cellular organisms → Bacteria	782	Open in IMG/M
3300025917\|Ga0207660_10609040	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	890	Open in IMG/M
3300026116\|Ga0207674_11423014	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	663	Open in IMG/M
3300027706\|Ga0209581_1000116	All Organisms → cellular organisms → Bacteria	257580	Open in IMG/M
3300027972\|Ga0209079_10248709	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	605	Open in IMG/M
3300031547\|Ga0310887_11014089	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	530	Open in IMG/M
3300031716\|Ga0310813_11854381	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	567	Open in IMG/M
3300031716\|Ga0310813_12008387	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	545	Open in IMG/M
3300031938\|Ga0308175_100082216	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2908	Open in IMG/M
3300031939\|Ga0308174_11872255	Not Available	516	Open in IMG/M
3300031996\|Ga0308176_10298204	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	1569	Open in IMG/M
3300032829\|Ga0335070_10137551	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2502	Open in IMG/M
3300032829\|Ga0335070_10165102	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	2237	Open in IMG/M
3300032893\|Ga0335069_10135190	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	3072	Open in IMG/M
3300032954\|Ga0335083_10132147	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	2390	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	62.62%
Host-Associated	Host-Associated	37.38%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	53.27%
Plants	Host-Associated → Plants	37.38%
Aquatic	Environmental → Aquatic	9.35%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	52.34%
Rhizosphere	Host-Associated → Plants → Rhizosphere	19.63%
Rhizoplane	Host-Associated → Plants → Rhizoplane	14.02%
Freshwater	Environmental → Aquatic → Freshwater	4.67%
Roots	Host-Associated → Plants → Roots	3.74%
Marine	Environmental → Aquatic → Marine	1.87%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.87%
Sediment	Environmental → Aquatic → Sediment	0.93%
Cave	Environmental → Terrestrial → Cave	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	35.51%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	14.95%
Loam	Environmental → Terrestrial → Soil → Loam	12.15%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	8.41%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	5.61%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.67%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.74%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	3.74%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.80%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.87%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.87%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.93%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.93%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.93%
Sand	Environmental → Terrestrial → Soil → Sand	0.93%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.23%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	14.95%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	8.41%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.48%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	5.61%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	4.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.67%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.74%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.74%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.74%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	3.74%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.80%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	1.87%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.87%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.93%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.93%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.93%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.93%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.93%
Mine Drainage	Environmental → Terrestrial → Soil → Unclassified → Mine Drainage	0.93%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	0.93%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	9.35%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	7.48%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	4.67%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	4.67%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	4.67%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	4.67%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	4.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.74%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.74%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	3.74%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	2.80%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.80%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.80%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	1.87%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.87%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.87%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.87%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	1.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	1.87%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.87%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.87%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	0.93%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	0.93%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.93%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.93%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.93%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.93%
Ore Pile And Mine Drainage Contaminated Soil	Environmental → Terrestrial → Soil → Unclassified → Mine Drainage → Ore Pile And Mine Drainage Contaminated Soil	0.93%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.93%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	0.93%
Microbial Mat On Rocks	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks	0.93%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.93%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.93%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300001305	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003432	Wetland sediment microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site B2 Bulk	Environmental	Open in IMG/M
3300003465	Ore pile and mine drainage contaminated soil microbial communities from Mina do Sossego, Brazil - P5 sample	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004808	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare1Fresh	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005531	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen12_06102014_R2	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300007982	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaG	Environmental	Open in IMG/M
3300009085	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 10-12cm September2015	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009165	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 1-3cm September2015	Environmental	Open in IMG/M
3300009430	Groundwater microbial communities from Big Spring, Nevada to study Microbial Dark Matter (Phase II) - Ash Meadows Big Spring	Environmental	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014487	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG	Environmental	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300019487	White microbial mat communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-4 metaG	Environmental	Open in IMG/M
3300020147	Soil microbial communities from Anza Borrego desert, Southern California, United States - S3+v_5-13C	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027706	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen15_06102014_R2 (SPAdes)	Environmental	Open in IMG/M
3300027972	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 10-12cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ13530_1013859441	3300001213	Wetland	GGMTRRRTREEIQKIVEELQASGLSHRDFCQQTGIKLSTLGRYARRVGGTEQTQQLVRVKLEPPQEPGSGFVLMLGNGRRIASGWGFPDTALARLIRLSESA*
C688J14111_100461331	3300001305	Soil	EVRQVVQQYRVSGLSQREFSQQTGIKLSTLGRYVRMEGRSDSPQQLVRVKLEGPAEPDTGFVLMLGNGRRIASGWEFSDVALAKLIRVVEHA*
C688J18823_100751113	3300001686	Soil	LSQREFSQQTGIKLSTLGRYVRMEGRSDSPQQLVRVKLEGPAEPDTGFVLMLGNGRRIASGWEFSDVALAKLIRVVEHA*
C688J35102_1177141831	3300002568	Soil	PLLIGVAADSETGGMATRRSAEEIEQVIGQYRSSGLSQREFSQHTGIKLSTLGRYLRRSEAPAQLVRVKLEEPSDPDTGFVLMLGNGRRIASGWGFADAGLARLIRVAEQA*
C688J35102_1178255792	3300002568	Soil	MARRRSTEEVRQVVQQYRVSGLSQREFSQQTGIKLSTLGRYVRMEGRSDSPQQLVRVKLEGPAEPDTGFVLMLGNGRRIASGWEFSDVALAKLIRVVEHA*
C688J35102_1203335573	3300002568	Soil	AKRGETGCMAQRRSPEEVRQVVQQYTASGLSQREFSQQTGIKLSTLGRYIRREGRSDGPQQLVRVKLEAPTEPDTGFVLLLGNGRRIASGWEFSDTALAKLIRVVEHA*
JGI20214J51088_102916183	3300003432	Wetland	KIVEELQVSGLSHRDFCQQTGIKLSTLGRYARRVGGTEQTQQLVRVKLEPPQEPGSGFVLMLGNGRRIASGWGFPDTALARLIRLSESA*
P52013CM_10561891	3300003465	Ore Pile And Mine Drainage Contaminated Soil	VVEQYRVSGLSQFEFCQQTGIKLSTLGRYVRRDGRAQQPQQLVRVRVDVPAEPESGFVLMLGNGRRIGSGWGFSDVALARLIRVVENA*
Ga0063356_1024921072	3300004463	Arabidopsis Thaliana Rhizosphere	LVVQQYRASGLSQREFSEQAGIKLSTLGRYVRRGERSEASQQLVRVKLDGPTEQDSGFVLMLVNGRGIASGWTFSETALARLIRVAENA*
Ga0062381_104209092	3300004808	Wetland Sediment	MTRRRTREEIQKIVEELQASGLSQRDFCQQTGIKLSTLGRYARRAGGTEQTQQLVRVKLEPPQEPGSGFVLMLGNGRRIASGWGFPDTALARLIRVSESA*
Ga0070680_1013495291	3300005336	Corn Rhizosphere	MPQRRSAEEVRQVVQEYTASGLSQREFSQQTGIKLSTLGRYVRREGRSGAPQQLVRVKLEAPAEPDSGFVLMLGNGRRIASGWGFS
Ga0070680_1019518191	3300005336	Corn Rhizosphere	MAQRRSAEEVREVVQQYTASGLSQLEFSRQSGIKLSTLGRYIRREGRSDAPQQLVRVKLQAAAEPDTGFVLMLGNGRRIASGWEFSDTALARLIRVAEG
Ga0068868_1008574232	3300005338	Miscanthus Rhizosphere	LIGIAGRGQTESMATRRSAEEVEQVVRQYRVSGLSQREFSQQTGIKLSTLGRYVRRDGRREAPQQLVRVKLEVPVEPDSGFVLMLGNGRRIASGWGFCDTALARLIRVAEQV*
Ga0070673_1018903591	3300005364	Switchgrass Rhizosphere	DEPVLIGIAGRGQTESMATRRSAEEVEQVVRQYRVSGLSQREFSQQTGIKLSTLGRYVRRDGRREAPQQLVRVKLEAPVEPDSGFVLMLGNGRRIASGWGFCDTALARLIRVAEQV*
Ga0070659_1009792842	3300005366	Corn Rhizosphere	MPQRRSAEEVRQVVQEYTASGLSQREFSQQTGIKLSTLGRYVRREGRSGAPQQLVRVKLEAPAEPDSGFVLMLGNGRRIASGWGFSDSALAKLIRIVEHA*
Ga0070667_1016661931	3300005367	Switchgrass Rhizosphere	MARRRGSEEVDQVVQQYRASGLSQREFAQQSGIKLSTLGRYVRRERRSEAPQQLVRVKLEAPAEPDCGFVLMLDNGRRIASGWTFSDAALARLIRVAENA*
Ga0070681_106416183	3300005458	Corn Rhizosphere	GMAQRRSAEEVREVVQQYTASGLSQREFSQQTGIKLSTLGRYVRREGRSDAPQQLVRVKLEAAAEPDTGFVLMLGNGRRIASGWEFSDVALAKLIRVVEHA*
Ga0070681_116667292	3300005458	Corn Rhizosphere	MAQRRSAEEVREVVQQYTASGLSQLEFSRQSGIKLSTLGRYIRREGRSDAPQQLVRVKLQAAAEPDTGFVLMLGNGRRIASGWEFSDTALARLIRVAEGA*
Ga0070685_108755522	3300005466	Switchgrass Rhizosphere	MARRRGSEEVEQVVQQYRASGLSQREFAQQSGIKLSTLGRYVRQERRSEAPQQLVRVKLEAPAEPDCGFVLMLDNGRRIASGWTFSDAALARLIRVAENA*
Ga0070738_1000084356	3300005531	Surface Soil	MRGADCRQTVGMARRRTAEEIQKIVEELQASGLSHRDFCQQTGIKLSTLGRYARRARGSEQPQQLVRVKLDVPQEPGAGFVLMLGNGRRIASGWGFSDTALARLIRVAESA*
Ga0070693_1016523381	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MATRRSAEEVEQVVRQYRVSGLSQREFSQQTGIKLSTLGRYVRRDGRREAPQQLVRVKLEVPVEPDSGFVLMLGNGRRIASGWGFCDTALARLIRVAEQV*
Ga0068857_1007464012	3300005577	Corn Rhizosphere	MARRRSAEEVRQVVEQYAASGLSQREFSQQTGIKLSTLGRYVRDERRSDAPQQLVRVKLEAPVEPDTGFVLMLSNGRRIASGWEFSEAALAKLIRVAEHA*
Ga0068854_1016312031	3300005578	Corn Rhizosphere	MAQRRSVEEVEQVVQQYRASGLSQRDFSQQTGIKLSTLGRYIRRNGESEPPQQLVRVKLEARVEPDPGFVLMLGNGRRIASGWGFCDTALARLIRVA
Ga0066654_101473991	3300005587	Soil	VQQYRASGLSQREFSQQTGIKLSTLGRYVRREGRPDAPQQLVRVKLQAPAEPDTGFVLMLGNGRRIASGWEFSDTALAKLIRVVEHA*
Ga0066654_105454791	3300005587	Soil	ETGGMATRRSAEEIEQVIGQYRSSGLSQREFSQHTGIKLSTLGRYLRRSEAPAQLVRVKLEEPSDPDTGFVLMLGNGRRIASGWGFADAGLARLIRVAEQA*
Ga0066654_108163061	3300005587	Soil	MATRRSAEEVEQVVQQYRASGLSQRDFSQQTGIKLSTLGRYIRRNGESEPPQQLVRVKLEAPVEPDSGFVLMLGNGRRIVGGWGFCDTALARLIRVAEQV*
Ga0068859_1008634003	3300005617	Switchgrass Rhizosphere	EEVEQVVQQYRASGLSQREFAHQAGIKLSTLGRYVRQERRSEAPRQLVRVKLEAPAEPDCGFVLMLDNGRRIASGWTFSDAALARLIRVAENA*
Ga0068863_1027245752	3300005841	Switchgrass Rhizosphere	VEQVVQQYRASGLSQREFAQQSGIKLSTLGRYVRQERRSEAPQQLVRVKLEAPAEPDCEFVLMLDNGRRIASGWTFSDAALARLIRVAENA*
Ga0068863_1027248651	3300005841	Switchgrass Rhizosphere	SMATRRSAEEVEQVVRQYRVSGLSQREFSQQTGIKLSTLGRYVRRDGRREAPQQLVRVKLEAPVEPDSGFVLMLGNGRRIASGWGFCDTALARLIRVAEQV*
Ga0070715_108401621	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	DESILPSVASRGETGGMAARRSTEEIRQVAQQYMVSGLSQREYSQQTGIKLSTLGRYIRRERRSDAPQKLVRVKLEAPAEPDTGFVLMLGNGRRIASGWEFSDAGLAKLIRVVEHS*
Ga0097621_1015137441	3300006237	Miscanthus Rhizosphere	DCGETGCMARRRGSEEVEQVVQQYRASGLSQREFAEQAGIKLSTLGRYVRRDRRSEAPQQLVRVKLEEPAEPDCGFVLMLDNGRRIASGWTFSDTALARLIRVAENA*
Ga0097621_1018514302	3300006237	Miscanthus Rhizosphere	MATRRSAEEVEQVVQQYRASGLSQRDFSQQTGIKLSTLGRYIRRNGESEPPQQLVRVKLEARVEPDPGFVLMLGNGRRIASGWGFCDTALARLIRVAEQV*
Ga0079222_102801132	3300006755	Agricultural Soil	MARRRSVEEVELVVQQYRASGLSQREFSEQAGIKLSTLGRYVRRGERSEASQQLVRVKLEVPAEPDSGFVLMLGNGRRIASGWEFPEPALAKLIRVVEHA*
Ga0075430_1003621521	3300006846	Populus Rhizosphere	RASGLSQREFSQQSGIKLSTLGRYIRRDGRPAAPQELVRVKLEAPVEPDSGFVLMLGNGRRIGSGWGFCDTALARLIRVAEQA*
Ga0102924_12084942	3300007982	Iron-Sulfur Acid Spring	MAQRRSAEEVRQVVQQYTVSGLSQREFSQQTGIKLSTLGRYVRREGRSDAPQQLVRVKLEAPTEPDTGFVLMLGNGRRIASGWEFSDTALAKLIRVVEHA*
Ga0105103_100881771	3300009085	Freshwater Sediment	MATRRSVEEVEQVVEQYRASGLSQREFSQQTGIKLSTLGRYVRRDGRSEARQELVRVKLEAPVEPDSGFVLMLGNGRRIAGGWGFCDTALARLIRVAEHA*
Ga0105240_111459312	3300009093	Corn Rhizosphere	VTAIRGETVGMAQRRSAEEVREVVQQYTASGLSQREFSQQTGIKLSTLGRYVRREGRSDAPQQLVRVKLEAAAEPDTGFVLMLGNGRRIASGWEFSDTALARLIRVAEGA*
Ga0111539_125047832	3300009094	Populus Rhizosphere	MSRRRSVEEVEQVVQQYRASGLSQREFSEQTGIKLSTLGRYVRRDGPPQAAQQLVRVKLKAPAEPDSGFVLMLGNGRRIASGWTFSDTALARLIRVAESA*
Ga0105102_106050392	3300009165	Freshwater Sediment	EQYRASGLSQREFSQQTGIKLSTLGRYVRRDGRSEARQELVRVKLEAPVELDSGFVLMLGNGRRIAGGWGFCDTALARLIRVAEHA*
Ga0114938_10562563	3300009430	Groundwater	MARHRTAEEIQKIVEELQASGLSHREFAQQSGIKLSTLGRYARQARQAVQPQRLVPVRLDALPEPAPGFALMLGNGRRITSGWGFPDQALARLIRVAESA*
Ga0105238_104806802	3300009551	Corn Rhizosphere	LPVTAIRGETGGMAQRRSAEEVREVVQQYTASGLSQREFSQQTGIKLSTLGRYVRREGRSDAPQQLVRVKLEAAAEPDTGFVLMLGNGRRIASGWEFSDTALARLIRVAEGA*
Ga0105238_127806671	3300009551	Corn Rhizosphere	GMARRRSADDVREIVEQYTASGLSQREFSQQTGIKLSTLGRYVRDERRSDAPQQLVRVKLEAPVEPDTGFVLMLSNGRRIASGWEFSEAALAKLIRVAEHA*
Ga0126307_115360632	3300009789	Serpentine Soil	MAQRRSAEEVEQVVQQYRASGLSQREFSQQAGIKLSTLGRYIRRDGRTEASQQLVRVKLEAPAEPDSGFVLMLGKGRRIASGWAFPDTALARLIRVAESA*
Ga0126305_101961071	3300010036	Serpentine Soil	LIGVADRGQTGSMATRRSAEEVDQVVQQYRASGLSQREFSRQTGIKLSTLGRYIRRHGRAEAPPQLVRVKLETPVEPDSGFVLMLGNGRRIASGWGFCDTVLARLIRVAENA*
Ga0126314_102205183	3300010042	Serpentine Soil	LIGVAADSETGGMATRRSAEEIEQVIGQYRSSGLSQREFSQQTGIKLSTLGRYLRRSEAPAQLVRVKLEEPSDPDTGFVLMLGNGRRIASGWGFADAGLARLIRVAEQA*
Ga0126314_103645082	3300010042	Serpentine Soil	LIGVADRGQTGSMARRRSAEEVEQVVQQYRASGLSQRDYAERAGIKLSTLGRYVRRGGHSETPQQLVRVKLEAPAEPDSGFVLMLGNGRRIASGWAFSDPGLARLIRVAESA*
Ga0126314_115116692	3300010042	Serpentine Soil	LIGVAGRGNTGSMARRRSAEEVEQVVQQYRASGLSQREFSEQFGIKLSSLGRYVRRADLPEARQQLVRVKLEAPAEPDSGFVLMLGNGRRIASGWAFSDTALARLIRVAENA*
Ga0126310_116656791	3300010044	Serpentine Soil	EVEQVVQQYRASGLSQREFSQQAGIKLSSLGRYIRRDGRTEASQQLVRVKLEAPAEPDSGFVLMLGNGRRIASGWAFPDTALARLIRVAESA*
Ga0126311_109486712	3300010045	Serpentine Soil	MAQRRSAEEVEQVVQQYRASGLSQREFSQQAGIKLSTLGRYIRRDGRTEASQQLVRVKLEAPAEPDSGFVLMLGNGRRIASGWAFPDTALARLTRVAESA*
Ga0126311_112366342	3300010045	Serpentine Soil	LIGVAADGETGGMATRRRAEEIEQVIGQYRSSGLSQREFSQQTGIKLSTLGRYLRRSEAPAQLVRVKLEEPSDPDTGFVLMLGNGRRIASGWGFADAGLARLIRVAEQA*
Ga0126384_101027652	3300010046	Tropical Forest Soil	LPGEGNSGETDGMARRRSAEEVRQVVEQYTASGLSQREFSQQSGIKLSTLGRYVRHERRSGAPQQLVRVKLEAPVEPDTGFVLMLDNGRRIASG*
Ga0126376_101080213	3300010359	Tropical Forest Soil	LPGEGNSGETDGMARRRSAEEVRQVVEQYTASGLSQREFSQQSGIKLSTLGRYVRYERRSGAPQQLVRVKLEAPVEPDTGFVLMLGNGRRIASGWEFCETALAKLIRVVEHA*
Ga0134128_111633272	3300010373	Terrestrial Soil	MAQRRSAEEVQQVVQRYTASGLSQREFSEQTGIKLSTLGRYIRREGRSDAPQQLVRVKLESPAEPDTGFVLMLGNGRRIASGWEFSDTALARLIRVVEHA*
Ga0134127_109855022	3300010399	Terrestrial Soil	MARRRGSEEVEQVVQQYRASGLSQREFAEQVGINLSTLGRYVRRDRRSEAPQQLVRVKLEAAAGPDSGFVLMLDNGRRIASGWTFSDAALARLIRVAENA*
Ga0134121_123223372	3300010401	Terrestrial Soil	MPQRRSAEEVRQVVQEYTASGLSQREFSQQTGIKLSTLGRYIRRNGESEPPQQLVRVKLEARVEPDPGFVLMLGNGRRIASGWGFCDTALARLIRVAEQV*
Ga0150985_1208056252	3300012212	Avena Fatua Rhizosphere	LIGVAADSETGGMATRRSAEEIEQVIGHYRSSGLSQREFSQHTGIKLSTLGRYLRRSEAPAQLVRVKLEEPSDPDTGFVLMLGNGRRIASGWGFADAGLARLIRVAEQA*
Ga0164300_101265593	3300012951	Soil	MATRRRAEEVEQVVQQYRASGLSQREFSEQTGIKLSTLGRYLRREGRSEARQQLVRVKLEAPVEPDSGFVLMLGNGRRIGSGWGFPETALARLIRVAEQA*
Ga0164298_108110421	3300012955	Soil	AEEVEQVVQQYRASGLSQREFAEQVGINLSTLGRYVRRDRRSEAPHQLVRVKLEEPAEPDCGFVLMLDNGRRIASGWTFSDTALARLIRVAENA*
Ga0164303_105071822	3300012957	Soil	MARRRGAEEVEQVVQQYRASGLSQREFAEQAGIKLSTLGRYVRRDRRSEAPQQLVRVKLEEPAEPDCGFVLMLDNGRRIASGWTFSDTALARLIRVAENA*
Ga0164301_106921492	3300012960	Soil	MATRRRAEEVEQVVQQYRASGLSQREFSEQTGIKLSTLGRYVRREGRSEARQQLVRVKLEAPVEPDSGFVLMLGNGRRIGSGWGFPETALARLIRVAEQA*
Ga0164302_114228862	3300012961	Soil	MAQRRSAEEVRQVVQQYTASGLSQREFSEQSGIKLSTLGRYVRQAGRSDAPQQLVRVNVQAPSEPDTGFVLMLGNGRRIASGWEFSDTALSKLIRVVEHA*
Ga0164302_116237322	3300012961	Soil	MATRRSAEEVEQVVQQYRASGLSQREFSEQTGIKLSTLGRYLRREGRSEARQQLVRVKLEAPVEPDSGFVLMLGNGRRIGSGWGFPETALARLIRVAEQA*
Ga0164302_116537592	3300012961	Soil	LIGIADCSETVCMARRRGAEEVEQIVQQYRASGLSQREFAEQAGIKLSTLGRYVRRDRRSEAPQQLVRVKLEEPAEPDCGFVLMLDNGRRIASGWTFSDTALARLIRVAENA*
Ga0164305_100371714	3300012989	Soil	MARRRGAEEVEQVVQQYRASGLSQREFAEQVGINLSTLGRYVRRDRRSEAPQQLVRVKLEEPAEPDCGFVLMLDNGRRIASGWTFSDTALARLIRVAENA*
Ga0157370_105646041	3300013104	Corn Rhizosphere	LPVTAIRGETGGMAQRRSAEEVREVVQQYTASGLSQLEFSRQSGIKLSTLGRYIRREGRSDAPQQLVRVKLQAAAEPDTGFVLMLGNGRRIASGWEFSDTALARLIRVAEGA*
Ga0157369_102850813	3300013105	Corn Rhizosphere	MPKRVNTEEIKQVIEQYRSSGLSQREFSEQTGIKLSTLGRYLRRSDVPQQLVRVRLESPSEPDSGFVLMLGNGRRIASGWAFADAVLARLIRVAEHA*
Ga0157369_111216861	3300013105	Corn Rhizosphere	AEEVREVVQQYTASGLSQLEFSRQSGIKLSTLGRYIRREGRSDAPQQLVRVKLQAAAEPDTGFVLMLGNGRRIASGWEFSDVALAKLIRVVEHA*
Ga0157374_116154091	3300013296	Miscanthus Rhizosphere	LSQREFSQQTGIKLSTLGRYVRRGQRSEAPQQLVRVKLETAAEPDSGFVLMLDNGRRIASGWTFSDTALARLIRVAENA*
Ga0157378_103436963	3300013297	Miscanthus Rhizosphere	MARRRGSEEVEQVVQQYRASGLSQREFAQQSGIKLSTLGRYVRRERRSEAPQQLVRVKLEAPAEPDCGFVLMLDNGRRIASGWTFSDAALARLIRVAENA*
Ga0163162_121881761	3300013306	Switchgrass Rhizosphere	RSAEEVEQVVQEYRASGLSQREFAQQAGIKLSTLGRYVRRDRRSEAPQQLVRVKLEEPAEPDCGFVLMLDNGRRIASGWTFSDTALARLIRVAENA*
Ga0157372_132599812	3300013307	Corn Rhizosphere	QEYTASGLSQREFSQQTGIKLSTLGRYVRREGRSGAPQQLVRVKLEAPAEPDSGFVLMLGNGRRIASGWGFSDSALAKLIRIVEHA*
Ga0157372_132630862	3300013307	Corn Rhizosphere	VQQYTASGLSQREFSQQTGIKLSTLGRYVRREGRSDAPQQLVRVKLEAAAEPDTGFVLMLGNGRRIASGWEFSDVALAKLIRVVEHA*
Ga0157375_110603642	3300013308	Miscanthus Rhizosphere	LIGVADCGETGCMARRRGSEEVEQVVQQYRASGLSQREFAHQAGIKLSTLGRYVRRERRSEAPQQLVRVKLEAPAESDCGFVLMLDNGRRIASGWTFSDAALARLIRVAENA*
Ga0163163_102890002	3300014325	Switchgrass Rhizosphere	LIGVADCGETGCMARRRGSEEVEQVVQQYRASGLSQREFAHQAGIKLSTLGRYVRRERRSEAPQQLVRVKLEAPAEPDCGFVLMLDNGRRIASGWTFSDAALARLIRVAENA*
Ga0163163_122586731	3300014325	Switchgrass Rhizosphere	MSGRRSAEEIRQVVHQYTVSGLSQREFSQQTGIKLSTLGRYVRRAGRSDAPQQLVRVKLQAPAEPDTGFVLMLGNGRRIASGWGFSDTALGKLIRVVENA*
Ga0182000_102078881	3300014487	Soil	MARRRSAEEVRQVFEQYTASGLSQREFSQQTGIKLSTLGRYVRDERRSDAPQQLVRVKLEAPVEPDTGFVLMLGNGRRIASGWEFSESALAKLIRVVEHA*
Ga0157377_108240632	3300014745	Miscanthus Rhizosphere	ATRRSAEEVEQVVQQYRASGLSQREFSEQAGIKLSTLGRYLRREGGSEARQQLVRVKLEAPVEPDSGFVLMLGNGRRIGRGWGFSETALARLIRVAEQA*
Ga0157376_104278913	3300014969	Miscanthus Rhizosphere	LIGIADRGKTESMATRRSAEEVEQVVQQYRVSGLSQREFSQQTGIKLSTLGRYIRRNGQSEPPQQLVRVKLEAPVEPDSGFVLMLGNGRRIASDTALARLIRVAEQV*
Ga0134072_104437732	3300015357	Grasslands Soil	GCMAQRRSPEEVRQVVQQYTASGLSQREFSQQTGIKLSTLGRYIRREGRSDGPQQLVRVKLEAPTEPDTGFVLLLGNGRRIASGWEFSDVALAKLIRVVEHA*
Ga0132258_109455492	3300015371	Arabidopsis Rhizosphere	MATRRSAEEVEQVVQQYRASGLSQREFSQQTGIKLSTLGRYVRRDGRREAPQQLVRVKLEVPVEPDSGFVLMLGNGRRIASGWGFCDTALARLIRVAEQV*
Ga0132256_1030812342	3300015372	Arabidopsis Rhizosphere	RRSAEEMQQVVEQYRASGLSQREFAQQAGVKLSTLGRYARRDRRSEAPQQLVRVKLEAPAEPDSGFVLMLDNGRRIASGWTFSDTALARLIRVAEDA*
Ga0132256_1036147701	3300015372	Arabidopsis Rhizosphere	LIGIADRGQTESMATRRSAEEVEQVVRQYRVSGLSQREFSQQTGIKLSTLGRYVRRDGRREAPQQLVRVKLEAPVEPDSGFVLMLGNGRRIASGWGFCDTALARLIRVAEQV*
Ga0132255_1005279083	3300015374	Arabidopsis Rhizosphere	LIGIAGRGQTESMATRRSAEEVEQVVQQYRASGLSQREFSQQTGIKLSTLGRYVRRDGRREAPQQLVRVKLEVPVEPDSGFVLMLGNGRRIASGWGFCDTALARLIRVAEQV*
Ga0132255_1008292964	3300015374	Arabidopsis Rhizosphere	MAQRRSVEEVEQVVQQYRASGLSQREFSQQTGIKLSTLGRYVRRGERSETAEPLVRVKLEAPTEPDSGFVLMLGNGRRIASGWTFSD
Ga0132255_1023803052	3300015374	Arabidopsis Rhizosphere	LIVVADCGETGCMARRRSAEEMQQVVEQYRASGLSQREFAQQAGVKLSTLGRYVRRDRRSEAAQQLVRVKLEAAAEPDSGFVLMLDNGRRIASGWTFSDTALARLIRVAENA*
Ga0132255_1059258511	3300015374	Arabidopsis Rhizosphere	RGETGCMAQRRNAEEVRQVVQQYAASGLSQREFSEQTGIKLSTLGRYIRREGRSDAPQQLVRVKLEAAAEPDTGFVLLLGNGRRIASGLEFSDAALAKLIRVVEHA*
Ga0182039_118676131	3300016422	Soil	RRDSEDRGRPAGEWALSHREFSQQSGIKLSTLGRYAVRARRREQPQHLMRVRLDAPQEPDAGFVLMLGNGRRIASGWGFPEAVLIRLIRIAESA
Ga0184629_105586222	3300018084	Groundwater Sediment	MATRRSAEEVEQVVQQYRASGLSQREFSQQAGIKLSTLGRYVRRDGRSETAQELVRVKLETPVAPDSGFVLMLGNGRRIASGWGFCDTALARVIRVAEHA
Ga0066667_109293061	3300018433	Grasslands Soil	MATRRSAEEIEQVIGQYRSSGLSQREFSQHTGIKLSTLGRYLRRSEAPAQLVRVKLEEPSDPDTGFVLMLGNGRRIASGWGFADAGLARLIRVAEQA
Ga0187893_101573183	3300019487	Microbial Mat On Rocks	MATRRSAEEVEQVVQQYRASGLSQREFSQQSGIKLSTLGRYIRQDGRPESPQELVRVKLEAPVEPGSGFVLMLGNGRRIASGWGFAETALARLIQVAEHA
Ga0196976_10280941	3300020147	Soil	MAQRRSAEEVEQVVRQYRESGLSQREFSQQAGIKLSTLGRYVRRGERSDAPQQLVRVNVESAAEAGSGFVLMLGNGRRIASGWAFCDAALARLIRVAESA
Ga0212123_103714832	3300022557	Iron-Sulfur Acid Spring	MAQRRSAEEVRQVVQQYTVSGLSQREFSQQTGIKLSTLGRYVRREGRSDAPQQLVRVKLEAPTEPDTGFVLMLGNGRRIASGWEFSDTALAKLIRVVEHA
Ga0207671_107381522	3300025914	Corn Rhizosphere	VEQVVQQYRASGLSQREFAQHSGIKLSTLGRYVRQERRSEAPQQLVRVKLEAPAEPDCGFVLMLDNGRRIASGWTFSDAALARLIRVAENA
Ga0207660_106090401	3300025917	Corn Rhizosphere	MAQRRSAEEVREVVQQYTASGLSQLEFSRQSGIKLSTLGRYIRREGRSDAPQQLVRVKLQAAAEPDTGFVLMLGNGRRIASGWEFSDTALARLIRVAEGA
Ga0207674_114230142	3300026116	Corn Rhizosphere	ASGLSQREFSQQTGIKLSTLGRYVRDERRSDAPQQLVRVKLEAPVEPDTGFVLMLSNGRRIASGWEFSEAALAKLIRVAEHA
Ga0209581_10001163	3300027706	Surface Soil	MRGADCRQTVGMARRRTAEEIQKIVEELQASGLSHRDFCQQTGIKLSTLGRYARRARGSEQPQQLVRVKLDVPQEPGAGFVLMLGNGRRIASGWGFSDTALARLIRVAESA
Ga0209079_102487091	3300027972	Freshwater Sediment	QTRLDRRCRPGETGRMATRRSVEEVEQVVEQYRASGLSQREFSQQTGIKLSTLGRYVRRDGRSEARQELVRVKLEAPVEPDSGFVLMLGNGRRIAGGWGFCDTALARLIRVAEHA
Ga0310887_110140892	3300031547	Soil	ERIVQQYRASGLSQREFSQQSGIKLSTLGRYIRRDGRPAAPQELVRVKLEAPVEPDSGFVLMLGNGRRIGSGWGFCDTALARLIRVAEQA
Ga0310813_118543812	3300031716	Soil	MRGSATGQTVGMARRRTAEEIQKIVEDLQASGLSHREFCQQTGIKLSTLGRYARQAKRAEGPQQVVRVRLDSPQEPDSGFVLMLGNGRRIASGWNFPDSVLARLIRVTESA
Ga0310813_120083871	3300031716	Soil	VKGRQTDDMARRRSAEEVRQVVEQYAASGLSQREFSQQTGIKLSTLGRYVRDERRSDAPQQLVRVKLEAAVEPDTGFVLMLGNGRRIAIGWEFSEAALAKLIRVVEHA
Ga0308175_1000822161	3300031938	Soil	MARRRSAEEVRQVVQQYTASGLSQREFSQQTGIKLSTLGRYVRREGRSDAPQQLLRVKVQAPAEPDTGFVLMLGNGRRIASGWEFSETTLAKLIRVVEHA
Ga0308174_118722551	3300031939	Soil	LSQREFSQQTGIKLSTLGRYVRMEGRSDSPQQLVRVKLEGPAEPDTGFVLMLGNGRRIASGWEFSDVALAKLIRVVEHA
Ga0308176_102982043	3300031996	Soil	MEQVVREYRASGLSQREFSEQTGVTLSSLGRYVRRDARSETPQPLVRVKLEAPVEPDSGFVLMLGNGRRIACGWAFSDTALARVIRVAENA
Ga0335070_101375512	3300032829	Soil	MARRRNAEEVRQVVEQYAASGLSQREFSEQTGIKLSTLGRYVRHQRGPDARQQLVRVKLEAPAEPDTGFVLMLGNGRRIASGWGFSDTALAKLIRVVEHA
Ga0335070_101651021	3300032829	Soil	MARRRTAEEIQKITEELEASGLSHRKFAEQYGIKLSTLGRYARRARQSQEPQQLVRVKLDAPQESDPGFVLMLGNGRRIASGWGFADSALIRLIRVAESA
Ga0335069_101351902	3300032893	Soil	VVEQYTASGLSQREFSEQTGIKLSTLGRYIRRDGRCDAPQQLVRVKLQPPADPDTGFVLVLGNGRRIASGWEFSDSALARLIRVVEHA
Ga0335083_101321471	3300032954	Soil	LPVPAGRGETGCMARRRSAEEVRQVVEQYAASGLSQREFSEQTGIKLSTLGRYVRRERGPDPPQQLVRVKLQSPAEPDTGFVLMLVNGRRIASGWEFSDSALARLIRVVEHA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F092767

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences