NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F092737

Metagenome Family F092737

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F092737
Family Type Metagenome
Number of Sequences 107
Average Sequence Length 55 residues
Representative Sequence MTALWYKWYIHLREEGGYSIGTALVAGWWNASVNEQYWTEGPKKWVDNRPERYYRG
Number of Associated Samples 68
Number of Associated Scaffolds 107

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 51.40 %
% of genes near scaffold ends (potentially truncated) 41.12 %
% of genes from short scaffolds (< 2000 bps) 84.11 %
Associated GOLD sequencing projects 57
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (53.271 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine
(45.794 % of family members)
Environment Ontology (ENVO) Unclassified
(86.916 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(82.243 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 42.86%    Coil/Unstructured: 57.14%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 107 Family Scaffolds
PF03796DnaB_C 13.08
PF136402OG-FeII_Oxy_3 11.21
PF01883FeS_assembly_P 8.41
PF07486Hydrolase_2 2.80
PF01180DHO_dh 2.80
PF03060NMO 1.87
PF04851ResIII 1.87
PF00383dCMP_cyt_deam_1 1.87
PF06945DUF1289 1.87
PF00462Glutaredoxin 1.87
PF11056UvsY 0.93
PF00478IMPDH 0.93
PF00149Metallophos 0.93
PF02796HTH_7 0.93
PF01370Epimerase 0.93
PF02945Endonuclease_7 0.93

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 107 Family Scaffolds
COG0305Replicative DNA helicaseReplication, recombination and repair [L] 13.08
COG1066DNA repair protein RadA/Sms, contains AAA+ ATPase domainReplication, recombination and repair [L] 13.08
COG2070NAD(P)H-dependent flavin oxidoreductase YrpB, nitropropane dioxygenase familyGeneral function prediction only [R] 4.67
COG0042tRNA-dihydrouridine synthaseTranslation, ribosomal structure and biogenesis [J] 2.80
COG0069Glutamate synthase domain 2Amino acid transport and metabolism [E] 2.80
COG0167Dihydroorotate dehydrogenaseNucleotide transport and metabolism [F] 2.80
COG1304FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomeraseEnergy production and conversion [C] 2.80
COG3773Cell wall hydrolase CwlJ, involved in spore germinationCell cycle control, cell division, chromosome partitioning [D] 2.80
COG0516IMP dehydrogenase/GMP reductaseNucleotide transport and metabolism [F] 1.87
COG3313Predicted Fe-S protein YdhL, DUF1289 familyGeneral function prediction only [R] 1.87


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A53.27 %
All OrganismsrootAll Organisms46.73 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000101|DelMOSum2010_c10031130All Organisms → Viruses → Predicted Viral2931Open in IMG/M
3300000101|DelMOSum2010_c10031368All Organisms → Viruses → Predicted Viral2914Open in IMG/M
3300001450|JGI24006J15134_10032388All Organisms → Viruses → Predicted Viral2279Open in IMG/M
3300004097|Ga0055584_101654923Not Available662Open in IMG/M
3300004448|Ga0065861_1031498Not Available528Open in IMG/M
3300006164|Ga0075441_10048209All Organisms → Viruses → Predicted Viral1695Open in IMG/M
3300006164|Ga0075441_10059307All Organisms → Viruses → Predicted Viral1505Open in IMG/M
3300006164|Ga0075441_10100566All Organisms → Viruses → Predicted Viral1109Open in IMG/M
3300006191|Ga0075447_10199245Not Available659Open in IMG/M
3300006193|Ga0075445_10042220All Organisms → Viruses → Predicted Viral1844Open in IMG/M
3300006947|Ga0075444_10106898All Organisms → Viruses → Predicted Viral1217Open in IMG/M
3300006947|Ga0075444_10282002Not Available645Open in IMG/M
3300009077|Ga0115552_1252379Not Available712Open in IMG/M
3300009124|Ga0118687_10003677Not Available5370Open in IMG/M
3300009172|Ga0114995_10064127All Organisms → Viruses → Predicted Viral2079Open in IMG/M
3300009172|Ga0114995_10091938All Organisms → Viruses → Predicted Viral1705Open in IMG/M
3300009172|Ga0114995_10211527All Organisms → Viruses → Predicted Viral1075Open in IMG/M
3300009172|Ga0114995_10810806Not Available513Open in IMG/M
3300009173|Ga0114996_10164617All Organisms → Viruses → Predicted Viral1816Open in IMG/M
3300009173|Ga0114996_10990103Not Available598Open in IMG/M
3300009193|Ga0115551_1148413All Organisms → cellular organisms → Archaea1074Open in IMG/M
3300009409|Ga0114993_10379618All Organisms → Viruses → Predicted Viral1065Open in IMG/M
3300009409|Ga0114993_10487918Not Available917Open in IMG/M
3300009409|Ga0114993_10564985Not Available840Open in IMG/M
3300009420|Ga0114994_10463128All Organisms → Viruses → environmental samples → uncultured marine virus837Open in IMG/M
3300009420|Ga0114994_10711270All Organisms → cellular organisms → Bacteria655Open in IMG/M
3300009425|Ga0114997_10018902All Organisms → Viruses → Predicted Viral4721Open in IMG/M
3300009425|Ga0114997_10448732All Organisms → cellular organisms → Bacteria692Open in IMG/M
3300009425|Ga0114997_10510797Not Available639Open in IMG/M
3300009425|Ga0114997_10652022All Organisms → cellular organisms → Archaea552Open in IMG/M
3300009426|Ga0115547_1065743All Organisms → Viruses → Predicted Viral1243Open in IMG/M
3300009428|Ga0114915_1159900Not Available635Open in IMG/M
3300009440|Ga0115561_1214203Not Available729Open in IMG/M
3300009441|Ga0115007_11352750Not Available500Open in IMG/M
3300009467|Ga0115565_10578663Not Available501Open in IMG/M
3300009476|Ga0115555_1465469Not Available500Open in IMG/M
3300009496|Ga0115570_10425555Not Available562Open in IMG/M
3300009512|Ga0115003_10068711All Organisms → Viruses → Predicted Viral2214Open in IMG/M
3300009512|Ga0115003_10204048All Organisms → Viruses → Predicted Viral1187Open in IMG/M
3300009512|Ga0115003_10329739Not Available902Open in IMG/M
3300009512|Ga0115003_10474132All Organisms → cellular organisms → Archaea733Open in IMG/M
3300009512|Ga0115003_10615630Not Available633Open in IMG/M
3300009512|Ga0115003_10775624All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae557Open in IMG/M
3300009526|Ga0115004_10215009All Organisms → Viruses → Predicted Viral1149Open in IMG/M
3300009526|Ga0115004_10429628Not Available782Open in IMG/M
3300009705|Ga0115000_10206881All Organisms → Viruses → Predicted Viral1292Open in IMG/M
3300009705|Ga0115000_10228127All Organisms → Viruses → Predicted Viral1222Open in IMG/M
3300009705|Ga0115000_10626799Not Available668Open in IMG/M
3300009706|Ga0115002_10100925All Organisms → cellular organisms → Bacteria2360Open in IMG/M
3300009785|Ga0115001_10567372Not Available695Open in IMG/M
3300009785|Ga0115001_10843518All Organisms → cellular organisms → Archaea551Open in IMG/M
3300009785|Ga0115001_10969193Not Available510Open in IMG/M
3300009786|Ga0114999_10106657All Organisms → Viruses → Predicted Viral2431Open in IMG/M
3300009786|Ga0114999_10746583Not Available728Open in IMG/M
3300009786|Ga0114999_10873610All Organisms → cellular organisms → Bacteria659Open in IMG/M
3300010883|Ga0133547_10975925Not Available1642Open in IMG/M
3300014818|Ga0134300_1015061All Organisms → Viruses → Predicted Viral1983Open in IMG/M
3300014973|Ga0134293_1019825Not Available860Open in IMG/M
3300017697|Ga0180120_10181393Not Available880Open in IMG/M
3300020165|Ga0206125_10075601Not Available1506Open in IMG/M
3300020165|Ga0206125_10229897Not Available712Open in IMG/M
3300020166|Ga0206128_1031239Not Available2827Open in IMG/M
3300020175|Ga0206124_10016494Not Available3835Open in IMG/M
3300020175|Ga0206124_10354800Not Available551Open in IMG/M
3300020182|Ga0206129_10266492Not Available709Open in IMG/M
3300020382|Ga0211686_10438608Not Available524Open in IMG/M
3300021365|Ga0206123_10334103Not Available637Open in IMG/M
3300021957|Ga0222717_10000230Not Available49036Open in IMG/M
3300022072|Ga0196889_1050732Not Available805Open in IMG/M
(restricted) 3300023109|Ga0233432_10313173Not Available720Open in IMG/M
(restricted) 3300024264|Ga0233444_10247952Not Available794Open in IMG/M
3300025138|Ga0209634_1251980Not Available638Open in IMG/M
3300025168|Ga0209337_1068195All Organisms → Viruses → Predicted Viral1770Open in IMG/M
3300025276|Ga0208814_1150266Not Available524Open in IMG/M
3300025276|Ga0208814_1156229Not Available507Open in IMG/M
3300025652|Ga0208134_1109370Not Available751Open in IMG/M
3300025680|Ga0209306_1214915Not Available519Open in IMG/M
3300025712|Ga0209305_1027417All Organisms → cellular organisms → Archaea2151Open in IMG/M
3300025822|Ga0209714_1029367All Organisms → Viruses → Predicted Viral2006Open in IMG/M
3300025870|Ga0209666_1337006All Organisms → cellular organisms → Archaea582Open in IMG/M
3300025881|Ga0209309_10375315Not Available619Open in IMG/M
3300027752|Ga0209192_10018381All Organisms → Viruses → Predicted Viral3539Open in IMG/M
3300027752|Ga0209192_10118362All Organisms → Viruses → Predicted Viral1076Open in IMG/M
3300027779|Ga0209709_10233452All Organisms → Viruses → environmental samples → uncultured marine virus829Open in IMG/M
3300027780|Ga0209502_10198520Not Available925Open in IMG/M
3300027780|Ga0209502_10258795Not Available769Open in IMG/M
3300027788|Ga0209711_10080259All Organisms → Viruses → Predicted Viral1699Open in IMG/M
3300027788|Ga0209711_10314513All Organisms → cellular organisms → Archaea672Open in IMG/M
3300027813|Ga0209090_10499897Not Available567Open in IMG/M
3300027847|Ga0209402_10144149Not Available1601Open in IMG/M
3300027849|Ga0209712_10652217Not Available582Open in IMG/M
3300031143|Ga0308025_1222907Not Available636Open in IMG/M
3300031510|Ga0308010_1043519All Organisms → Viruses → Predicted Viral1858Open in IMG/M
3300031510|Ga0308010_1106362All Organisms → Viruses → Predicted Viral1082Open in IMG/M
3300031510|Ga0308010_1248544Not Available626Open in IMG/M
3300031519|Ga0307488_10060425All Organisms → Viruses → Predicted Viral2893Open in IMG/M
3300031519|Ga0307488_10063313All Organisms → Viruses → Predicted Viral2811Open in IMG/M
3300031519|Ga0307488_10136942Not Available1732Open in IMG/M
3300031519|Ga0307488_10141601All Organisms → Viruses → Predicted Viral1696Open in IMG/M
3300031519|Ga0307488_10780969Not Available531Open in IMG/M
3300031598|Ga0308019_10153564Not Available912Open in IMG/M
3300031626|Ga0302121_10098264All Organisms → cellular organisms → Archaea862Open in IMG/M
3300031659|Ga0307986_10384956Not Available564Open in IMG/M
3300031687|Ga0308008_1060061All Organisms → cellular organisms → Archaea900Open in IMG/M
3300031696|Ga0307995_1234106Not Available637Open in IMG/M
3300031721|Ga0308013_10075692All Organisms → Viruses → Predicted Viral1347Open in IMG/M
3300031721|Ga0308013_10300646All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → unclassified Pelagibacterales → Pelagibacterales bacterium564Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine45.79%
Pelagic MarineEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine10.28%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine9.35%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine7.48%
SeawaterEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Seawater6.54%
Sackhole BrineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine4.67%
Deep OceanEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean2.80%
MarineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine2.80%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater1.87%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous1.87%
MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine1.87%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient0.93%
MarineEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine0.93%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water0.93%
Pelagic MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine0.93%
SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment0.93%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000101Marine microbial communities from Delaware Coast, sample from Delaware MO Early Summer May 2010EnvironmentalOpen in IMG/M
3300001450Marine viral communities from the Pacific Ocean - LP-53EnvironmentalOpen in IMG/M
3300004097Pelagic marine sediment microbial communities from the LTER site Helgoland, North Sea, for post-phytoplankton bloom and carbon turnover studies - OSD3 (Helgoland) metaGEnvironmentalOpen in IMG/M
3300004448Marine viral communities from Newfoundland, Canada BC-1EnvironmentalOpen in IMG/M
3300006164Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG002-DNAEnvironmentalOpen in IMG/M
3300006191Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG104-DNAEnvironmentalOpen in IMG/M
3300006193Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG029-DNAEnvironmentalOpen in IMG/M
3300006947Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG017-DNAEnvironmentalOpen in IMG/M
3300009077Pelagic marine microbial communities from North Sea - COGITO_mtgs_110328EnvironmentalOpen in IMG/M
3300009124Marine sediment microbial communities from methane seeps within Hudson Canyon, US Atlantic Margin - Hudson Canyon PC-16 72 cmbsfEnvironmentalOpen in IMG/M
3300009172Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_154EnvironmentalOpen in IMG/M
3300009173Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_134EnvironmentalOpen in IMG/M
3300009193Pelagic marine microbial communities from North Sea - COGITO_mtgs_110321EnvironmentalOpen in IMG/M
3300009409Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_150EnvironmentalOpen in IMG/M
3300009420Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_152EnvironmentalOpen in IMG/M
3300009425Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_136EnvironmentalOpen in IMG/M
3300009426Pelagic marine microbial communities from North Sea - COGITO_mtgs_100420EnvironmentalOpen in IMG/M
3300009428Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_55EnvironmentalOpen in IMG/M
3300009440Pelagic marine microbial communities from North Sea - COGITO_mtgs_110512EnvironmentalOpen in IMG/M
3300009441Marine eukaryotic phytoplankton communities from Arctic Ocean - Arctic Ocean ARC135M MetagenomeEnvironmentalOpen in IMG/M
3300009467Pelagic marine microbial communities from North Sea - COGITO_mtgs_110530EnvironmentalOpen in IMG/M
3300009476Pelagic marine microbial communities from North Sea - COGITO_mtgs_110407EnvironmentalOpen in IMG/M
3300009496Pelagic marine microbial communities from North Sea - COGITO_mtgs_120524EnvironmentalOpen in IMG/M
3300009512Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_88EnvironmentalOpen in IMG/M
3300009526Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_90EnvironmentalOpen in IMG/M
3300009705Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_128EnvironmentalOpen in IMG/M
3300009706Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_86EnvironmentalOpen in IMG/M
3300009785Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_130EnvironmentalOpen in IMG/M
3300009786Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_126EnvironmentalOpen in IMG/M
3300010883western Arctic Ocean co-assemblyEnvironmentalOpen in IMG/M
3300014818Marine microbial communities to study oil droplet degradation from Trondheimsfjord, Norway - 0152 : 8 days incubationEnvironmentalOpen in IMG/M
3300014973Marine microbial communities to study oil droplet degradation from Trondheimsfjord, Norway - 0116 : 2 days incubationEnvironmentalOpen in IMG/M
3300017697Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.2_DNA (version 2)EnvironmentalOpen in IMG/M
3300020165Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160331_1EnvironmentalOpen in IMG/M
3300020166Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160426_1EnvironmentalOpen in IMG/M
3300020175Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160321_2EnvironmentalOpen in IMG/M
3300020182Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160502_2EnvironmentalOpen in IMG/M
3300020382Marine microbial communities from Tara Oceans - TARA_B100000780 (ERX556058-ERR599059)EnvironmentalOpen in IMG/M
3300021365Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160316_1EnvironmentalOpen in IMG/M
3300021957Estuarine water microbial communities from San Francisco Bay, California, United States - C33_18DEnvironmentalOpen in IMG/M
3300022072Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 (v3)EnvironmentalOpen in IMG/M
3300023109 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_122_August2016_10_MGEnvironmentalOpen in IMG/M
3300024264 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_124_October2016_10_MGEnvironmentalOpen in IMG/M
3300025138Marine viral communities from the Pacific Ocean - LP-40 (SPAdes)EnvironmentalOpen in IMG/M
3300025168Marine viral communities from the Pacific Ocean - LP-53 (SPAdes)EnvironmentalOpen in IMG/M
3300025276Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_55 (SPAdes)EnvironmentalOpen in IMG/M
3300025652Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (SPAdes)EnvironmentalOpen in IMG/M
3300025680Pelagic marine microbial communities from North Sea - COGITO_mtgs_110328 (SPAdes)EnvironmentalOpen in IMG/M
3300025712Pelagic marine microbial communities from North Sea - COGITO_mtgs_110321 (SPAdes)EnvironmentalOpen in IMG/M
3300025822Pelagic marine microbial communities from North Sea - COGITO_mtgs_110414 (SPAdes)EnvironmentalOpen in IMG/M
3300025870Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S3LV_125m_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025881Pelagic marine microbial communities from North Sea - COGITO_mtgs_120412 (SPAdes)EnvironmentalOpen in IMG/M
3300027752Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_154 (SPAdes)EnvironmentalOpen in IMG/M
3300027779Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_136 (SPAdes)EnvironmentalOpen in IMG/M
3300027780Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_90 (SPAdes)EnvironmentalOpen in IMG/M
3300027788Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_88 (SPAdes)EnvironmentalOpen in IMG/M
3300027813Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_152 (SPAdes)EnvironmentalOpen in IMG/M
3300027847Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_126 (SPAdes)EnvironmentalOpen in IMG/M
3300027849Marine eukaryotic phytoplankton communities from Arctic Ocean - Arctic Ocean - Greenland ARC118M Metagenome (SPAdes)EnvironmentalOpen in IMG/M
3300031143Marine microbial communities from water near the shore, Antarctic Ocean - #422EnvironmentalOpen in IMG/M
3300031510Marine microbial communities from water near the shore, Antarctic Ocean - #129EnvironmentalOpen in IMG/M
3300031519Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 0.2EnvironmentalOpen in IMG/M
3300031598Marine microbial communities from water near the shore, Antarctic Ocean - #284EnvironmentalOpen in IMG/M
3300031626Marine microbial communities from Western Arctic Ocean, Canada - CB21_surfaceEnvironmentalOpen in IMG/M
3300031659Marine microbial communities from Ellis Fjord, Antarctic Ocean - #82EnvironmentalOpen in IMG/M
3300031687Marine microbial communities from water near the shore, Antarctic Ocean - #125EnvironmentalOpen in IMG/M
3300031696Marine microbial communities from Ellis Fjord, Antarctic Ocean - #262EnvironmentalOpen in IMG/M
3300031721Marine microbial communities from water near the shore, Antarctic Ocean - #181EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
DelMOSum2010_1003113093300000101MarineMTALWYKWYIHLREEGYSIGTALVAGWWNASVNAQYWTEGPKKWVDNRPKRYYRG*
DelMOSum2010_1003136873300000101MarineMTALWYKWYIHLREEGYSIGTALVAGWWNASINAQYWTEGPKKWVDNRPERYYRG*
JGI24006J15134_1003238863300001450MarineMTALWYKWYIHLREEGGYSIGTALVAGWWNASVNEAYWTEGPKKWVDNRPERPYRG*
Ga0055584_10165492323300004097Pelagic MarineMTALWYKWYIHLREDGYGVGTALVAGWWNASVNEQYWTEGPKKWVDDRPVRYYRGTL*
Ga0065861_103149823300004448MarineMTALWYKWYIHLREEGYSIGTALVAGWWNASINAQYWTEGPKKWVDNR
Ga0075441_1004820923300006164MarineMTALWYKWYIHLREEGGYTIGTALVAGWWNASVNEAYWMEGPKKWVDNRPERYYRG*
Ga0075441_1005930753300006164MarineMDERERVYNRMTALWYKWYIHLREEGGYSIGTALVAGWWNASLNDQYWTEGPKKWVDNRPKRYYGG*
Ga0075441_1010056623300006164MarineMTALWYKWYIHLREEGGYTIGTALVAGWWNASVNEAYWMEGPKKWVDNRPKRYYRG*
Ga0075447_1019924513300006191MarineYKWYIHLREEGGYTIGTALVAGWWNASVNEAYWMEGPKKWVDNRPKRYYRG*
Ga0075445_1004222023300006193MarineMTALWYKWYIHLREEGGYTIFTALVAGWWNASVNEAYWMEGPKKWVDNRPKRYYRG*
Ga0075444_1010689823300006947MarineMTALWYKWYIHLREEGGYTIGTALVAGWWNASVNEAYWMEGPKKWVDNR
Ga0075444_1028200223300006947MarineWYKWYIHFREEGCNVLSSIVEGWWNAILNDLYWTEGPKKWVDNRPERPYREE*
Ga0115552_125237923300009077Pelagic MarineMTALWYKWYIHLREEGYSIGTALVAGWWNASINAQYWTEGPKKWVDNRPKRYYRG*
Ga0118687_1000367783300009124SedimentMDENEWIYNRMTALWYKWYIHLREEGGYSIVTALVAGWWSASVNEQYWTEGPKKWVDNRPKRYYRG*
Ga0114995_1006412723300009172MarineMTALWYKWYIHLREEGGYSIGTALVAGWWNASVNEQYWTEGPKKWVDNRPERYYRG*
Ga0114995_1009193823300009172MarineMTALWYKWYIHFREEGCNVMPSIVEGWWNAILNDLYWTEGPKKWVDNRPKRYYRG*
Ga0114995_1021152723300009172MarineMTALWYKWYIHLREDGYSIGTALVAGWWNASVNEAYWTEGPKKWVDNRPERYYRG*
Ga0114995_1081080633300009172MarineWYIHLREEGGYSIGTALVAGWWNASINEAYWTEGPKKWVDNRPERYYRG*
Ga0114996_1016461763300009173MarineTALWYKWYNHLREEGGYSIGTALVAGWWNASINEAYWTEGPKKWVDNRPERYYRG*
Ga0114996_1099010333300009173MarineWIHNRMTALWYKWYIHFRGEGCNVLPSIIEGWWNAILNDLYWTEGPKKWVDNRPERYYRG
Ga0115551_114841323300009193Pelagic MarineMTALWYKWYIHFREEGCNVLPSIVEGWWNAILNDLHWHEGPKKWVDNRPERYYRG*
Ga0114993_1037961823300009409MarineMTALWYKWYIHFREEGCNVLSSIVEGWWNAILNDLYWTEGPKKWVDNRPEKPYREE*
Ga0114993_1048791823300009409MarineMTALWYKWYIHLRDDGYSIGTALVAGWWNASLNAAYWTEGPKKWVDNRPQRYYRG*
Ga0114993_1056498523300009409MarineMTALWYKWYIHLREEGYSISTALTAGWWNASVNEQYWTEGPKKWVDNRPERYYRG*
Ga0114994_1046312813300009420MarineVTALWYKWYNHLREEGGYSIGTALVAGWWNASINEAYWTEGPKKWVDNRPKRPYRG*
Ga0114994_1071127023300009420MarineMTALWYKWYIHFREEGCNVLSSIVEGWWNAILNDLYWTEGPKKWVDNRPERPYREE*
Ga0114997_1001890253300009425MarineVTALWYKWYNHLREEGGYSIGTALVAGWWNASINEAYWMEGPKKWVDNRPKRPYRG*
Ga0114997_1044873223300009425MarineMTALWYKWYIHLREEGGYSIGTALVAGWWNASLNAAYWTEGPKKWVDNRDKYYRGNDD*
Ga0114997_1051079733300009425MarineMTALWYKWYIHLREEGGYSIGTALVAGWWNASLNAAYWTEGPKKWADNRDNYYRGNEND*
Ga0114997_1065202223300009425MarineMTALWYKWYIHLREDGYSIGTALVAGWWNASVNEAYWMEGPKKWVDNRPKRYYRG*
Ga0115547_106574323300009426Pelagic MarineMTALWYKWYIHLREEGYSIGTALVAGWWNASVNEQYWTEGPKKWVDNRPDRYYRG*
Ga0114915_115990023300009428Deep OceanHRMTALWYKWYIHLREEGGYTIGTALVAGWWNASVNEAYWMEGPKKWVDNRPKRYYRG*
Ga0115561_121420313300009440Pelagic MarineALWYKWYIHLREEGYSIGTALVAGWWNASVNEQYWTEGPKKWVDNRPDRYYRG*
Ga0115007_1135275023300009441MarineMTALWYKWYIHLRDDGYSIGTALVAGWWNASLNAAYWTEGPKKWVDNRPDRYYRG*
Ga0115565_1057866323300009467Pelagic MarineMTALWYKWYIHLREEGGYSIGTALVAGWWNASINAQYWTEGPKKWVDNRPKRYYRG*
Ga0115555_146546923300009476Pelagic MarineMTALWYKWYIHFREEGCNVLPSIVEGWWNAILNDLHWHEGPKKWVDNRPEKYYRG*
Ga0115570_1042555523300009496Pelagic MarineMTALWYKWYIHLREDGYGVGTALVAGWWNASINAQYWTEGPKKWVDNRPKRYYRG*
Ga0115003_1006871143300009512MarineMTALWYKWYIHLREEGGYSIVTALVAGWWNASVNEAYWMEGPKKWVDNRPKRYYRG*
Ga0115003_1020404823300009512MarineMTALWYKWYIHFREEGCNVMPSIVEGWWNAILNDLYWTEGPKK
Ga0115003_1032973923300009512MarineVTALWYKWYNHLREEGGYSIGTALVAGWWNASINEAYWMEGPKKWVDNRPERYYKG*
Ga0115003_1047413213300009512MarineALWYKWYIHFREEGCNVMPSIVEGWWNAILNDLYWTEGPKKWVDNRPKRYYRG*
Ga0115003_1061563033300009512MarineEWIHNRMTALWYKWYIHLREEGGYSIGTALVAGWWNASLNAAYWTEGPKKWVDNRPERYYRG*
Ga0115003_1077562413300009512MarineMDENEWIYNRMTALWYKWYIHLREEGCNVLPSIVEGWWNAILNDLRWHEGPKKWVDNRPERYYRG*
Ga0115004_1021500913300009526MarineNRMTALWYKWYIHLREEGGYSIGTALVAGWWNASLNAAYWTEGPKKWVDNRPERYYRG*
Ga0115004_1042962823300009526MarineMTALWYKWYIHLREEGGYSIGTALVAGWWNASLNAAYWTEGPKKWVDNRPERYYRG*
Ga0115000_1020688123300009705MarineMTALWYKWYIHLREEGGYSIGTGLVAGWWNASVNEAYWMEGPKKWVDDRPVRYYRG*
Ga0115000_1022812713300009705MarineMTALWYKWYIHFREEGCNVMPSIVEGWWNAILNDLYWTEGPKKWVDN
Ga0115000_1062679923300009705MarineMTALWYKWYIHLREEGGYSIGTALVAGWWNASLNAAYWTEGPKKWADNRDNYYRG
Ga0115002_1010092543300009706MarineYKWYIHLREEGGYSIGTALVAGWWNASINEAYWMEGPKKWVDNRPQRYYRG*
Ga0115001_1056737213300009785MarineRMTALWYKWYIHLREEGGYSIGTALVAGWWNASINEAYWMEGPKKWVDNRPERYYRG*
Ga0115001_1084351813300009785MarineREEGCNVLPSIVEGWWNAILNDLHWHEGPKKWVDNRPERYYRG*
Ga0115001_1096919323300009785MarineDEDEWIHHRMTALWYKWYIHLREEGGYTIATALVAGWWNASVNEAYWMEGPKKWVDNRPKRPYRG*
Ga0114999_1010665723300009786MarineMTALWYKWYIHLREVGGYSIGTALVAGWWNASVNEQYWTEGPKKWVDNRPERYYRG*
Ga0114999_1074658323300009786MarineSMTALWYKWYIHLREEGGYSIGTALVAGWWNASVNAAYWTEGPKKWVDNRPQRYYRG*
Ga0114999_1087361023300009786MarineMTALWYKWYIHFREEGCNVLSSIVEGWWNAILNDLYWTEGPKKWVDNRPEKPFK*
Ga0133547_1097592513300010883MarineMTALWYKWYIHLREEGYSISTALTAGWWNASVNEQYWTEGPKKWVDDRPVRYYRG*
Ga0134300_101506133300014818MarineMDENEWIYNRMTALWYKWYIHFREEGCNVLPSIVEGWWNAILNDLYWTEGPKKWVDNRPERPYRG*
Ga0134293_101982513300014973MarineMTALWYKWYIHFREEGCNVLPSIVEGWWNAILNDLYWHEGPKKWVDNRPERYYRG*
Ga0180120_1018139313300017697Freshwater To Marine Saline GradientIHLREEGYSIGTALVAGWWNASINAQYWTEGPKKWVDNRPERYYRG
Ga0206125_1007560133300020165SeawaterHLREDGYGVGTALVAGWWNASVNEQYWTEGPKKWVDDRPVRYYRGTL
Ga0206125_1022989733300020165SeawaterMTALWYKWYIHLREDGYSVGTALVAGWWNASVNEQYWTEGPKKWVDDRPVRYYRGTL
Ga0206128_103123963300020166SeawaterMTALWYKWYIHLREDGYGVGTALVAGWWNASVNEQYWTEGPKKWVDDRPVRGYRGTL
Ga0206124_1001649473300020175SeawaterMTALWYKWYIHLREDGYGVGTALVAGWWNASVNEQYWTEGPKKWVDDRPVRYYRGTL
Ga0206124_1035480013300020175SeawaterRRMASMTALWYKWYIHLREEGYSIGTALVAGWWNASVNEQYWTEGPKKWVDNRPDRYYRG
Ga0206129_1026649223300020182SeawaterMTALWYKWYIHLREEGYSIGTALVAGWWNASVNEQYWTEGPKKWVDNRPDRYYRG
Ga0211686_1043860823300020382MarineMTALWYKWYIHLREEGGYTIGTALVAGWWNASVNEAYWMEGPKKWVDNRPERYYRG
Ga0206123_1033410333300021365SeawaterYKWYIHLREDGYGVGTALVAGWWNASVNEQYWTEGPKKWVDDRPVRYYRGTL
Ga0222717_10000230833300021957Estuarine WaterMTALWYKWYIHLREEGYSIGTALVAGWWNASINAQYWTEGPKKWVDNRPDRYYRG
Ga0196889_105073233300022072AqueousGIHNRMTALWYKWYIHLREEGYSIGTALVAGWWNASVNAQYWTEGPKKWVDNRPERYYRG
(restricted) Ga0233432_1031317323300023109SeawaterMTALWYKWYIHLREEGGYSIVTALVAGWWNASVNEQYWTEGPKKWVDNRPKRYYRG
(restricted) Ga0233444_1024795223300024264SeawaterMTALWYKWYIHLREEGGYSIGTALVAGWWNASVNEQYWTEGPKKWVDNRPERYYRG
Ga0209634_125198013300025138MarineEGMTALWYKWYIHLREEGGYSIGTALVAGWWNASVNEAYWTEGPKKWVDNRPERPYRG
Ga0209337_106819523300025168MarineMTALWYKWYIHLREEGGYSIGTALVAGWWNASVNEAYWTEGPKKWVDNRPERPYRG
Ga0208814_115026623300025276Deep OceanMTALWYKWYIHLREEGGYTIGTALVAGWWNASVNEAYWMEGPKKWVDNRPKRYYRG
Ga0208814_115622923300025276Deep OceanMTALWYKWYIHFREEGCNVLSSIVEGWWNAILNDLYWTEGPKKWVDNRPERPYREE
Ga0208134_110937023300025652AqueousMTALWYKWYIHLREEGYSIGTALVAGWWNASVNAQYWTEGPKKWVDNRPKRYYRG
Ga0209306_121491523300025680Pelagic MarineMTALWYKWYIHLREEGYSIGTALVAGWWNASINAQYWTEGPKKWVDNRPKRYYRG
Ga0209305_102741733300025712Pelagic MarineMTALWYKWYIHFREEGCNVLPSIVEGWWNAILNDLHWHEGPKKWVDNRPERYYRG
Ga0209714_102936743300025822Pelagic MarineMTALWYKWYIHLREEGYSIGTALVAGWWNASVNEQYWTEGPKKWVDNRPDRYYR
Ga0209666_133700633300025870MarineMTALWYKWYIHLREEGYSISTALTAGWWNASVNEQYWTEGPKKWVDDRPVRYYRG
Ga0209309_1037531523300025881Pelagic MarineMTALWYKWYIHFREEGCNVLPSIVEGWWNAILNDLHWHEGPKKWVDNRP
Ga0209192_1001838173300027752MarineMTALWYKWYIHFREEGCNVMPSIVEGWWNAILNDLYWTEGPKKWVDNRPKRYYRG
Ga0209192_1011836233300027752MarineMTALWYKWYIHLREDGYSIGTALVAGWWNASVNEAYWTEGPKKWVDNRPERYYRG
Ga0209709_1023345213300027779MarineVTALWYKWYNHLREEGGYSIGTALVAGWWNASINEAYWMEGPKKWVDNRPKRPYRG
Ga0209502_1019852023300027780MarineMTALWYKWYIHLREEGYSIGTALVAGWWNASINAQYWTEGPKKWVDNRPERYYRG
Ga0209502_1025879513300027780MarineHNRMTALWYKWYIHLREEGGYSIGTALVAGWWNASLNAAYWTEGPKKWVDNRPERYYRG
Ga0209711_1008025933300027788MarineMASMTALWYKWYIHLREDGYSIGTALVAGWWNASVNEAYWTEGPKKWVDNRPERYYRG
Ga0209711_1031451313300027788MarineHNRMTALWYKWYIHLREEGCNVLPSIVEGWWNAILNDLHWHEGPKKWVDNRPERYYRG
Ga0209090_1049989723300027813MarineMTALWYKWYIHLREEGGYSIGTALVAGWWNASLNAAYWTEGPKKWVDNRPERYYRG
Ga0209402_1014414933300027847MarineMTALWYKWYIHLREEGGYSIGTALVAGWWNASLNAAYWTEGPKKWADNRDKYYR
Ga0209712_1065221733300027849MarineKWYIHFREEGCNVMPSIVEGWWNAILNDLYWTEGPKKWVDNRPERYYRG
Ga0308025_122290723300031143MarineVTALWYKWYNHLREEGGYSIGTALVAGWWNAILNDLRWTEGPKKWVDNRPKRPYRG
Ga0308010_104351913300031510MarineVTALWYKWYNHLREEGGYSIGTALVAGWWNAILNDLRWTEGPKK
Ga0308010_110636243300031510MarineTALWYKWYIHLREEGGYTIGTALVAGWWNASVNEAYWMEGPKKWVDNRPERYYRG
Ga0308010_124854413300031510MarineEDEWIHDRMTALWYKWYIHLREEGGYTIGTALVAGWWNASVNEAYWMEGPKKWVDNRPERYYRG
Ga0307488_1006042523300031519Sackhole BrineMTALWYKWYIHFREEGCNVLPSIVEGWWNAILNDLYWTEGPKKWIDNRPQRYYRG
Ga0307488_1006331323300031519Sackhole BrineMTALWYKWYIHLREEGGYSIVTALVAGWWNASVNEAYWMEGPKKWVDNRPKRYYRG
Ga0307488_1013694253300031519Sackhole BrineMTALWYKWYIHLREEGYSISTALTAGWWNASVNEQYWTEGPRKWVDDRPVRYYRGTL
Ga0307488_1014160123300031519Sackhole BrineMTALWYKWYIHFREEGCNVLSSIVEGWWNAILNDLYWTEGPKKWVDNRPEKPFK
Ga0307488_1078096913300031519Sackhole BrineNRMTALWYKWYIHLREEGGYSIGTALVAGWWNASINEAYWMEGPKKWVDNRPERPYRG
Ga0308019_1015356433300031598MarineIHLREEGGYTIGTALVAGWWNASVNEAYWMEGPKKWVDNRPKRYYRG
Ga0302121_1009826423300031626MarineMTALWYKWYIHLREEGGYSIGTALVAGWWNASVNEAYWMEGPKKWVDNRPDRYYRG
Ga0307986_1038495623300031659MarineALWYKWYIHLREEGGYTIGTALVAGWWNASVNEAYWMEGPKKWVDNRPKRYYRG
Ga0308008_106006113300031687MarineRMTALWYKWYILLRNEHNASVMVSLIEGWWNAILNDLYYTEGPKKWIDNRPCTIHEG
Ga0307995_123410613300031696MarineKWYIHLREEGGYSIGTALVAGWWNASVNEAYWMEGPKKWVDNRPERYYRG
Ga0308013_1007569213300031721MarineVTALWYKWYNHLREEGGYSIGTALVAGWWNAILNDLRWTEGPKKWVDN
Ga0308013_1030064623300031721MarineIHLREEGGYSISTALVAGWWNAILNDLYWTEGPKKWVDNRPERYYRG


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