NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F092729

Metagenome Family F092729

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F092729
Family Type Metagenome
Number of Sequences 107
Average Sequence Length 68 residues
Representative Sequence MTSKRYQIQQKLKPLYEIRTRVGTQFSKAKEANDTETIEIWERVWKAVAKEIVALHDETYAINDKENGIVKS
Number of Associated Samples 76
Number of Associated Scaffolds 107

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 85.98 %
% of genes near scaffold ends (potentially truncated) 28.04 %
% of genes from short scaffolds (< 2000 bps) 85.98 %
Associated GOLD sequencing projects 64
AlphaFold2 3D model prediction Yes
3D model pTM-score0.73

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (71.963 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine
(59.813 % of family members)
Environment Ontology (ENVO) Unclassified
(92.523 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(73.832 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 65.00%    β-sheet: 0.00%    Coil/Unstructured: 35.00%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.73
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP familySCOP domainRepresentative PDBTM-score
a.47.5.1: FlgN-liked2fupa12fup0.869
a.24.9.1: alpha-catenin/vinculind3rf3b23rf30.8281
a.2.5.1: Prefoldind1fxkc_1fxk0.82802
a.30.2.1: Homodimeric domain of signal transducing histidine kinased2c2aa12c2a0.82423
a.2.8.1: Eukaryotic DNA topoisomerase I, dispensable insert domaind1k4ta11k4t0.82422


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 107 Family Scaffolds
PF06067DUF932 1.87
PF16363GDP_Man_Dehyd 0.93



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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A71.96 %
All OrganismsrootAll Organisms28.04 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000158|SI54feb11_100mDRAFT_c1021286Not Available1107Open in IMG/M
3300000187|SI53jan11_100mDRAFT_c1033631Not Available698Open in IMG/M
3300001683|GBIDBA_10086409All Organisms → Viruses → Predicted Viral1021Open in IMG/M
3300002511|JGI25131J35506_1000758All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium5515Open in IMG/M
3300002760|JGI25136J39404_1073205Not Available640Open in IMG/M
3300002760|JGI25136J39404_1081940Not Available604Open in IMG/M
3300002760|JGI25136J39404_1091951Not Available570Open in IMG/M
3300002760|JGI25136J39404_1114856Not Available509Open in IMG/M
3300002760|JGI25136J39404_1118412Not Available502Open in IMG/M
3300004457|Ga0066224_1224982Not Available711Open in IMG/M
3300005427|Ga0066851_10195260Not Available637Open in IMG/M
3300006164|Ga0075441_10157108Not Available856Open in IMG/M
3300006738|Ga0098035_1029556All Organisms → Viruses → Predicted Viral2087Open in IMG/M
3300006738|Ga0098035_1094396Not Available1046Open in IMG/M
3300006750|Ga0098058_1133549Not Available660Open in IMG/M
3300006751|Ga0098040_1092867Not Available912Open in IMG/M
3300006752|Ga0098048_1151419Not Available691Open in IMG/M
3300006753|Ga0098039_1156901Not Available777Open in IMG/M
3300006754|Ga0098044_1346075Not Available564Open in IMG/M
3300006789|Ga0098054_1040100All Organisms → Viruses → Predicted Viral1814Open in IMG/M
3300006793|Ga0098055_1042477Not Available1854Open in IMG/M
3300006900|Ga0066376_10129237All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → SAR202 cluster → SAR202 cluster bacterium1553Open in IMG/M
3300006921|Ga0098060_1217638Not Available520Open in IMG/M
3300006924|Ga0098051_1033831Not Available1442Open in IMG/M
3300006929|Ga0098036_1036173Not Available1545Open in IMG/M
3300007963|Ga0110931_1026421All Organisms → Viruses → Predicted Viral1753Open in IMG/M
3300007963|Ga0110931_1140522Not Available726Open in IMG/M
3300008050|Ga0098052_1164445Not Available874Open in IMG/M
3300008216|Ga0114898_1007814All Organisms → cellular organisms → Bacteria4398Open in IMG/M
3300008217|Ga0114899_1268279Not Available521Open in IMG/M
3300009135|Ga0118736_10012839All Organisms → Viruses → Predicted Viral1867Open in IMG/M
3300009172|Ga0114995_10225407Not Available1038Open in IMG/M
3300009370|Ga0118716_1038798All Organisms → cellular organisms → Bacteria3080Open in IMG/M
3300009370|Ga0118716_1242126Not Available800Open in IMG/M
3300009409|Ga0114993_11182416Not Available539Open in IMG/M
3300009412|Ga0114903_1003028All Organisms → cellular organisms → Bacteria5821Open in IMG/M
3300009425|Ga0114997_10162414All Organisms → Viruses → Predicted Viral1311Open in IMG/M
3300009602|Ga0114900_1013305All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon3249Open in IMG/M
3300009619|Ga0105236_1018480Not Available795Open in IMG/M
3300009619|Ga0105236_1064190Not Available506Open in IMG/M
3300009622|Ga0105173_1107424Not Available517Open in IMG/M
3300010149|Ga0098049_1133248Not Available771Open in IMG/M
3300010149|Ga0098049_1253066Not Available535Open in IMG/M
3300010150|Ga0098056_1074602Not Available1163Open in IMG/M
3300010150|Ga0098056_1118485All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Rhodopirellula → unclassified Rhodopirellula → Rhodopirellula sp.900Open in IMG/M
3300010155|Ga0098047_10055859All Organisms → Viruses → Predicted Viral1557Open in IMG/M
3300010155|Ga0098047_10356396Not Available550Open in IMG/M
3300010883|Ga0133547_10273400Not Available3528Open in IMG/M
3300013098|Ga0164320_10162355Not Available1012Open in IMG/M
3300017703|Ga0181367_1087036Not Available538Open in IMG/M
3300017718|Ga0181375_1071767Not Available566Open in IMG/M
3300017757|Ga0181420_1091350Not Available943Open in IMG/M
3300017775|Ga0181432_1082636Not Available940Open in IMG/M
(restricted) 3300024259|Ga0233437_1082363All Organisms → Viruses → Predicted Viral1686Open in IMG/M
(restricted) 3300024518|Ga0255048_10001832All Organisms → cellular organisms → Bacteria14195Open in IMG/M
3300025052|Ga0207906_1043511Not Available608Open in IMG/M
3300025066|Ga0208012_1005414All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon2561Open in IMG/M
3300025066|Ga0208012_1005760Not Available2460Open in IMG/M
3300025103|Ga0208013_1050446Not Available1132Open in IMG/M
3300025108|Ga0208793_1048391All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon1322Open in IMG/M
3300025118|Ga0208790_1052223Not Available1281Open in IMG/M
3300025118|Ga0208790_1105036Not Available818Open in IMG/M
3300025122|Ga0209434_1154211Not Available622Open in IMG/M
3300025125|Ga0209644_1000144Not Available21708Open in IMG/M
3300025125|Ga0209644_1067150Not Available833Open in IMG/M
3300025125|Ga0209644_1070025Not Available816Open in IMG/M
3300025125|Ga0209644_1144823Not Available566Open in IMG/M
3300025128|Ga0208919_1002159All Organisms → cellular organisms → Bacteria10536Open in IMG/M
3300025128|Ga0208919_1171960Not Available662Open in IMG/M
3300025128|Ga0208919_1192296Not Available616Open in IMG/M
3300025133|Ga0208299_1127438Not Available826Open in IMG/M
3300025241|Ga0207893_1021109Not Available907Open in IMG/M
3300025241|Ga0207893_1033421Not Available730Open in IMG/M
3300025267|Ga0208179_1101169Not Available568Open in IMG/M
3300025300|Ga0208181_1002097All Organisms → cellular organisms → Bacteria7345Open in IMG/M
3300025719|Ga0209252_1150819Not Available748Open in IMG/M
3300025873|Ga0209757_10065888Not Available1079Open in IMG/M
3300025873|Ga0209757_10088525Not Available940Open in IMG/M
3300025873|Ga0209757_10213411Not Available612Open in IMG/M
3300025873|Ga0209757_10245309Not Available569Open in IMG/M
3300027714|Ga0209815_1147765Not Available751Open in IMG/M
3300027752|Ga0209192_10306845Not Available570Open in IMG/M
3300027779|Ga0209709_10325007Not Available643Open in IMG/M
(restricted) 3300027861|Ga0233415_10246180Not Available834Open in IMG/M
3300028706|Ga0257115_1068689Not Available996Open in IMG/M
3300031519|Ga0307488_10054343All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → SAR202 cluster → SAR202 cluster bacterium3086Open in IMG/M
3300031588|Ga0302137_1072458Not Available1367Open in IMG/M
3300031598|Ga0308019_10162953Not Available880Open in IMG/M
3300031605|Ga0302132_10324764Not Available708Open in IMG/M
3300031605|Ga0302132_10421213Not Available598Open in IMG/M
3300031606|Ga0302119_10066896Not Available1484Open in IMG/M
3300031606|Ga0302119_10188264All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → SAR202 cluster → SAR202 cluster bacterium805Open in IMG/M
3300031627|Ga0302118_10122252All Organisms → Viruses → Predicted Viral1286Open in IMG/M
3300031627|Ga0302118_10186684Not Available998Open in IMG/M
3300031775|Ga0315326_10129324All Organisms → cellular organisms → Bacteria1653Open in IMG/M
3300031800|Ga0310122_10064318All Organisms → Viruses → Predicted Viral1915Open in IMG/M
3300032011|Ga0315316_10227151All Organisms → Viruses → Predicted Viral1561Open in IMG/M
3300032019|Ga0315324_10104321All Organisms → Viruses → Predicted Viral1066Open in IMG/M
3300032032|Ga0315327_10225040Not Available1177Open in IMG/M
3300032032|Ga0315327_10699094Not Available621Open in IMG/M
3300032048|Ga0315329_10051511All Organisms → Viruses → Predicted Viral2001Open in IMG/M
3300032048|Ga0315329_10085213Not Available1584Open in IMG/M
3300032048|Ga0315329_10472393All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Poribacteria → unclassified Candidatus Poribacteria → Candidatus Poribacteria bacterium668Open in IMG/M
3300032048|Ga0315329_10639158Not Available563Open in IMG/M
3300032360|Ga0315334_10506478All Organisms → Viruses → Predicted Viral1034Open in IMG/M
3300032360|Ga0315334_10807459Not Available812Open in IMG/M
3300032360|Ga0315334_11662268Not Available544Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine59.81%
SeawaterEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater11.21%
Deep OceanEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean7.48%
Marine OceanicEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine Oceanic2.80%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater2.80%
MarineEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine2.80%
MarineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine1.87%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine1.87%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater1.87%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine0.93%
MarineEnvironmental → Aquatic → Marine → Inlet → Unclassified → Marine0.93%
Sackhole BrineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine0.93%
MarineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine0.93%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine0.93%
Hydrothermal Vent PlumeEnvironmental → Aquatic → Marine → Hydrothermal Vents → Unclassified → Hydrothermal Vent Plume0.93%
Marine SedimentEnvironmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Sediment0.93%
Marine SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Marine Sediment0.93%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000158Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - 54 02/08/11 100mEnvironmentalOpen in IMG/M
3300000187Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - 53 01/11/11 100mEnvironmentalOpen in IMG/M
3300001683Hydrothermal vent plume microbial communities from Guaymas Basin, Gulf of California - IDBA assemblyEnvironmentalOpen in IMG/M
3300002511Marine viral communities from the Pacific Ocean - ETNP_2_1000EnvironmentalOpen in IMG/M
3300002760Marine viral communities from the Pacific Ocean - ETNP_6_1000EnvironmentalOpen in IMG/M
3300004457Marine viral communities from Newfoundland, Canada MC-1EnvironmentalOpen in IMG/M
3300005427Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV65EnvironmentalOpen in IMG/M
3300006164Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG002-DNAEnvironmentalOpen in IMG/M
3300006738Marine viral communities from the Subarctic Pacific Ocean - 3_ETSP_OMZ_AT15126 metaGEnvironmentalOpen in IMG/M
3300006750Marine viral communities from the Subarctic Pacific Ocean - 19_ETSP_OMZ_AT15317 metaGEnvironmentalOpen in IMG/M
3300006751Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaGEnvironmentalOpen in IMG/M
3300006752Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaGEnvironmentalOpen in IMG/M
3300006753Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaGEnvironmentalOpen in IMG/M
3300006754Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaGEnvironmentalOpen in IMG/M
3300006789Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaGEnvironmentalOpen in IMG/M
3300006793Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaGEnvironmentalOpen in IMG/M
3300006900Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_Bottom_ad_5009_LV_AEnvironmentalOpen in IMG/M
3300006921Marine viral communities from the Subarctic Pacific Ocean - 21_ETSP_OMZ_AT15319 metaGEnvironmentalOpen in IMG/M
3300006924Marine viral communities from the Subarctic Pacific Ocean - 14B_ETSP_OMZ_AT15311_CsCl metaGEnvironmentalOpen in IMG/M
3300006929Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaGEnvironmentalOpen in IMG/M
3300007963Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (version 2)EnvironmentalOpen in IMG/M
3300008050Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaGEnvironmentalOpen in IMG/M
3300008216Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_GeostarEnvironmentalOpen in IMG/M
3300008217Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_215EnvironmentalOpen in IMG/M
3300009135Marine sediment microbial communities from methane seeps within Hudson Canyon, US Atlantic Margin - Hudson Canyon PC-16 382 cmbsfEnvironmentalOpen in IMG/M
3300009172Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_154EnvironmentalOpen in IMG/M
3300009370Combined Assembly of Gp0127930, Gp0127931EnvironmentalOpen in IMG/M
3300009409Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_150EnvironmentalOpen in IMG/M
3300009412Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s2EnvironmentalOpen in IMG/M
3300009425Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_136EnvironmentalOpen in IMG/M
3300009602Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_231EnvironmentalOpen in IMG/M
3300009619Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3827_250EnvironmentalOpen in IMG/M
3300009622Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3321_4155EnvironmentalOpen in IMG/M
3300010149Marine viral communities from the Subarctic Pacific Ocean - 13B_ETSP_OMZ_AT15268_CsCl metaGEnvironmentalOpen in IMG/M
3300010150Marine viral communities from the Subarctic Pacific Ocean - 17B_ETSP_OMZ_AT15314_CsCl metaGEnvironmentalOpen in IMG/M
3300010155Marine viral communities from the Subarctic Pacific Ocean - 12_ETSP_OMZ_AT15267 metaGEnvironmentalOpen in IMG/M
3300010883western Arctic Ocean co-assemblyEnvironmentalOpen in IMG/M
3300013098Subseafloor sediment microbial communities from Guaymas Basin, Gulf of California, Mexico - Guay11, Core 4567-28, 0-3 cmEnvironmentalOpen in IMG/M
3300017703Marine viral communities from the Subarctic Pacific Ocean - ?Lowphox_02 viral metaGEnvironmentalOpen in IMG/M
3300017718Marine viral communities from the Subarctic Pacific Ocean - Lowphox_11 viral metaGEnvironmentalOpen in IMG/M
3300017757Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 43 SPOT_SRF_2013-05-22EnvironmentalOpen in IMG/M
3300017775Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 55 SPOT_SRF_2014-07-17EnvironmentalOpen in IMG/M
3300024259 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_122_August2016_200_MGEnvironmentalOpen in IMG/M
3300024518 (restricted)Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_2EnvironmentalOpen in IMG/M
3300025052Marine viral communities from the Pacific Ocean - LP-37 (SPAdes)EnvironmentalOpen in IMG/M
3300025066Marine viral communities from the Subarctic Pacific Ocean - 15B_ETSP_OMZ_AT15312_CsCl metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025103Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025108Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025118Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025122Marine viral communities from the Pacific Ocean - ETNP_2_300 (SPAdes)EnvironmentalOpen in IMG/M
3300025125Marine viral communities from the Pacific Ocean - ETNP_2_1000 (SPAdes)EnvironmentalOpen in IMG/M
3300025128Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025133Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025241Marine viral communities from the Deep Pacific Ocean - MSP-121 (SPAdes)EnvironmentalOpen in IMG/M
3300025267Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_Geostar (SPAdes)EnvironmentalOpen in IMG/M
3300025300Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s6 (SPAdes)EnvironmentalOpen in IMG/M
3300025719Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI074_LV_135m_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025873Marine viral communities from the Pacific Ocean - ETNP_6_1000 (SPAdes)EnvironmentalOpen in IMG/M
3300027714Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG002-DNA (SPAdes)EnvironmentalOpen in IMG/M
3300027752Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_154 (SPAdes)EnvironmentalOpen in IMG/M
3300027779Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_136 (SPAdes)EnvironmentalOpen in IMG/M
3300027861 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_12_MGEnvironmentalOpen in IMG/M
3300028706Marine microbial communities from Saanich Inlet, British Columbia, Canada - SI112_100mEnvironmentalOpen in IMG/M
3300031519Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 0.2EnvironmentalOpen in IMG/M
3300031588Marine microbial communities from Western Arctic Ocean, Canada - CBN3_SCMEnvironmentalOpen in IMG/M
3300031598Marine microbial communities from water near the shore, Antarctic Ocean - #284EnvironmentalOpen in IMG/M
3300031605Marine microbial communities from Western Arctic Ocean, Canada - CB9_32.1EnvironmentalOpen in IMG/M
3300031606Marine microbial communities from Western Arctic Ocean, Canada - AG5_TmaxEnvironmentalOpen in IMG/M
3300031627Marine microbial communities from Western Arctic Ocean, Canada - AG5_33.1EnvironmentalOpen in IMG/M
3300031775Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 80m 32315EnvironmentalOpen in IMG/M
3300031800Marine microbial communities from Western Arctic Ocean, Canada - CB6_Bottom_1051EnvironmentalOpen in IMG/M
3300032011Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 60m 3416EnvironmentalOpen in IMG/M
3300032019Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 21515EnvironmentalOpen in IMG/M
3300032032Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 100m 32315EnvironmentalOpen in IMG/M
3300032048Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 32315EnvironmentalOpen in IMG/M
3300032360Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 34915EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
SI54feb11_100mDRAFT_102128623300000158MarineMTSRRYQIQQKLKPLYEIRTRCGTQFAKAKEANDTETIEIWERVWKAVANEIVALHDETYEINDKENGIVKS*
SI53jan11_100mDRAFT_103363113300000187MarineIQQKLKPLYEIRTRCGTQFAKAKEANDTETIEIWERVWKAVANEIVALHDETYEINDKENGIVKS*
GBIDBA_1008640933300001683Hydrothermal Vent PlumeMTSRRYQIQQKLKPLYEIRTRVSTQFRKAKDANDTDTIEIWERVWFAVTNEILALHNETYEINDKEKLMKS*
JGI25131J35506_100075833300002511MarineMTSKRYQIQQKLKPLYEIRTRVGTQFGKAKEANDTDTIEIWERVWFAVTNEIVALHEDAHELKEKEIK*
JGI25136J39404_107320533300002760MarineMPEPSKQYQLQQKLKPLYELRTRVSTQFRKAKDANDTDTIEIWERVWFAVTDEIVALHEERHELKEIK*
JGI25136J39404_108194013300002760MarineYEIRTRVSTQFGKAKEANDTDTIEIWERVWFAVTNEIVALHNETYEINDKENGIVKS*
JGI25136J39404_109195123300002760MarineMTSKRYQIQQKLKPLYEIRTRVSTQFRLAKEANDTDTIEIWERVWWAVANEIVALH
JGI25136J39404_111485623300002760MarineYQIQQKLKPLYEIRTRISTQFRKAKDANDTETIEIWERVWNAVANEIVALHDETYEINDIERLAVREKEKLMKS*
JGI25136J39404_111841223300002760MarineMTSKRYQIQQKLKPLYEIRTRVXTQFAKAKEANDTDTIEIWERVWKAVANEIVALHEEAYEMKEKEIN*
Ga0066224_122498223300004457MarineMTSKRYQIQQKLKPLYEIRTRVSTQFRAAKNANDTDTIEIWERVWKAVTNEIVALHDEAELKYSIFK*
Ga0066851_1019526013300005427MarineMTSKRYQIQQKLKPLYEIRTRVGTQFRKAREANDTDTLEIWERVWKAVAKEIIALHEDNHKLKEVK*
Ga0075441_1015710813300006164MarineMPEPSKRYQIQQKLKPLYEIRTRVSTQFRKAKDANDTETIEIWERVWKAVANEIVALHEDAHELKEKEISDFEQFALDIE*
Ga0098035_102955633300006738MarineMTSKRYQTQQKLKPLYEIRTRVSTQFRKAKDANDTDTIEIWERVWKAVAKEIVALHEDAHELKEVK*
Ga0098035_109439623300006738MarineMTSRRYQIQQKLKPLYEIRTRVGTQFSKAKEANDTETIEIWERVWKAVAKEIVALHDETYAINDKENGIVKS*
Ga0098058_113354923300006750MarineMASRRYQIQQKLKPLYEIRTRVGTQFSKAKEANDTETIEIWERVWKAVAKEIVALHDETYAINDKENGIVKS*
Ga0098040_109286733300006751MarineMTSKRYQIQQKLKPLYEIRTRVGTQFRKAREANDTDTIEIWERVWKAVAKEIVALHEDAHKLKEVK*
Ga0098048_115141913300006752MarineMTSKRYQTQQKLKPLYEIRTRVGTQFRKAKDANDTETIEIWERVWKAVAKEIVSLHEEAH
Ga0098039_115690123300006753MarineMASRRYQIQQKLKPLYEIRTRVGTQFRKAKDANDTETIEIWERVWFAVANEIVALHNETYEINDKETAIMKS*
Ga0098044_134607523300006754MarineMTSRRYQIQQKLKPLYEIRTRIGTQFSKAKEANDTETIEIWERVWKAVAKEIVALHDETYEINDKEKLMKS*
Ga0098054_104010023300006789MarineMTSKRYQTQQKLKPLYEIRTRVGTQFRKAKDANDTETIEIWERVWKAVAKEIIALHEDNHKLKEVK*
Ga0098055_104247723300006793MarineMTSKRYQTQKKLKPLYEIRTRVGTQFRKAKDANDTETIEIWERVWKAVAKEIIALHEDNHKLKEVK*
Ga0066376_1012923733300006900MarineMSHNTSKLYQTMQKLKPLYEIRTRIGTQFRAAKEANDTDTIEIWERVWKAVAKEIVALHGDIDEVREHLKAKEMEVK*
Ga0098060_121763833300006921MarineMASRRYQIQQKLKPLYEIRTRIGTQFSKAKEANDTETIEIWERVWKAVAKEIVSLHEEAHEAKGVK*
Ga0098051_103383113300006924MarineVKTIPTKGNIMTSKRYQTQQKLKPLYEIRTRVGTQFRKAKDANDTETIEIWERVWKAVAKEIIALHEDNHKLKEVK*
Ga0098036_103617333300006929MarineMNSKRYRIQQKLKPLYEIRTRVGTQFRKAREANDTDTLEIWERVWKAVAKEIVSLHEEAHEEKEVK*
Ga0110931_102642123300007963MarineMTSKRYQTQQKLKPLYEIRTRVGTQFRKAKDANDTETIEIWERVWKAVAKEIVSLHEEAHEAKGVK*
Ga0110931_114052223300007963MarineMPEPSKLYQTMQKLKPLYEIRTRIGTQFSKAKEANDTDTIEIWERVWKAVAAEIVA
Ga0098052_116444523300008050MarineMTSKRYQIQQKLKPLYEIRTRVGTQFRKAREANDTDTIEIWERVWKAVAKEIVALHEDAHELKEVK*
Ga0114898_100781483300008216Deep OceanMTSKRYQIQQKLKPLYEIRTRVGTQFSKAKEANDTETIEIWERVWKAVAKEIVALHDETYAINDKENGIVKS*
Ga0114899_126827913300008217Deep OceanMTSKRYQIQQKLKPLYEIRTRVGTQFRKAREANDTETIEIWERVWKAVAKEIVALHDETYAINDKENGIVKS*
Ga0118736_1001283923300009135Marine SedimentMPKPSKQYRIQQKLKPLYEIRTRIGTQFSKAKEANDTETIEIWERVWKAVAKEIVALHEENHKLKELK*
Ga0114995_1022540723300009172MarineMITSKRYQIQQKLKPLYEIRTRVSTQFRKAKEANDTETIEIWERVWKAVTNEIVALHDEAELKYSIFK*
Ga0118716_103879853300009370MarineMTSRRYQIQQKLKPLYEIRTRVGTQFRKAKDANDTETIEIWERVWKAVAKEIVALHDETYAINDKENGIVKS*
Ga0118716_124212633300009370MarineKPLYEIRTRVGTQFSKAKEANDTETIEIWERVWKAVAKEIVALHDETYEINDKENGIVKS
Ga0114993_1118241613300009409MarineMTSKRYQIQQKLKPLYEIRTRCGTQFRKAKEANDTDTIEIWERVWKAVANEIVALHDEAELKYTIFK*
Ga0114903_1003028113300009412Deep OceanMTSRRYQIQQKLKPLYEIRTRIGTQFSKAKEANDTETIEIWERVWKAVAKEIVALHDETYAINDKENGIVKS*
Ga0114997_1016241443300009425MarineMITSKRYQIQQKLKPLYEIRTRVSTQFRKAKKANDTETIEIWERVWKSVTNEIVALHDEAELKYTIFK*
Ga0114900_101330513300009602Deep OceanYQIQQKLKPLYEIRTRVGTQFRKAREANDTETIEIWERVWKAVAKEIVALHDETYAINDKENGIVKS*
Ga0105236_101848033300009619Marine OceanicMASRRYQIQQKLKPLYEIRTRIGTQFRKAREANDTDTIEIWERVWKAVAAEIVAL
Ga0105236_106419023300009619Marine OceanicMTSRRYQIQQKLKPLYEIRTRVGTQFSKAKEANDTETIEIWERVWKAVAKEIVALHDETYAINDKENGIVKA*
Ga0105173_110742423300009622Marine OceanicMTSKRYQIQQKLKPLYEIRTRVSTQFRLAKEANDTDTIEIWERVWWAVANEIVALHEDAHELKETSWVAGERK*
Ga0098049_113324813300010149MarineMTSRRYQIQQKLKPLYEIRTRVGTQFSKAKEANDTETIEIWERVWKAVAKEIVSLHEEAHEEKEVK*
Ga0098049_125306623300010149MarineMTSKRYQTQQKLKPLYEIRTRVDTQFRKAKDANDTETIEIWERVWKAVAKEIIALHEDNHKLKEVK*
Ga0098056_107460243300010150MarineMTSRRYQIQQKLKPLYEIRTRIGTQFSKAKEANDTETIEIWERVWKAVAKEIVSL
Ga0098056_111848513300010150MarineKLKPLYEIRTRVGTQFSKAKEANDTETIEIWERVWKAVAKEIVALHDETYAINDKENGIVKS*
Ga0098047_1005585933300010155MarineMTSKRYQIQQKLKPLYEIRTRVSTQFRKAKDANDTDTIEIWERVWKAVAKEIVALHEDAHKLKEVK*
Ga0098047_1035639623300010155MarineMASRRYQIQQKLKPLYEIRTRVGTQFRKAKDANDTETIEIWERVWKAVAKEIIALHEDNHKLKEVK*
Ga0133547_1027340023300010883MarineMTSRRYQIQQKLKPLYEIRTRIGTQFGKAKEANDTDTIEIWERVWKAVAKEIVALHDEAHEIKLEKTSGITKD*
Ga0164320_1016235533300013098Marine SedimentMTSRRYQIQQKLKPLYEIRTRVGTQFRKAKDANDTDTIEIWERVWFAVTNEIVALHNETYEINDKENGIVKS*
Ga0181367_108703613300017703MarineMTSKRYQIQQKLKPLYEIRTRVGTQFSKAKEANDTETIEIWERVWKAVAKEIVALHDETYAINDKENGIVKS
Ga0181375_107176723300017718MarineMNSKRYRIQQKLKPLYEIRTRVGTQFRKAREANDTDTLEIWERVWKAVAKEIVALHDETYAINDKENGIVKS
Ga0181420_109135033300017757SeawaterMTSKRYQIQQKLKPLYEIRTRVGTQFRKAKDANDTETIEIWERVYFAVAKEIIALHEDNHKLKELK
Ga0181432_108263613300017775SeawaterMKGKIMTSRRYQIQQKLKPLYEIRTRVGTQFRKAREANDTDTIEIWERVWKVVAAEIVALHEEAHELKESQKS
(restricted) Ga0233437_108236323300024259SeawaterMTSRRYQIQQKLKPLYEIRTRCGTQFAKAKEANDTETIEIWERVWKAVANEIVALHDETYEINDKENGIVKS
(restricted) Ga0255048_10001832223300024518SeawaterMTSRRYQIQQKLKPLYEIRTRVGTQFSKAREANDTETIEIWERVWKAVAKEIVALHDETYAINDKENGIVKS
Ga0207906_104351123300025052MarineMTSKRYQIQQKLKPLYEIRTRVGTQFGKAKEANDTDTIEIWERVWFAVTNEIVALHNETYEINDKEKLMKS
Ga0208012_100541413300025066MarineMTSRRYQIQQKLKPLYEIRTRVGTQFSKAKEANDTETIEIWERVWKAVAKEIVALHDETYAINDKENGIVKS
Ga0208012_100576043300025066MarineMTSKRYQTQQKLKPLYEIRTRVGTQFRKAKDANDTETIEIWERVWKAVAKEIIALHEDNHKLKEVK
Ga0208013_105044613300025103MarineMTSRRYQIQQKLKPLYEIRTRIGTQFSKAKEANDTETIEIWERVWKAVAKEIVALHDETYEINDKEKLMKS
Ga0208793_104839113300025108MarineGKIMTSRRYQIQQKLKPLYEIRTRIGTQFSKAKEANDTETIEIWERVWKAVAKEIVALHDETYAINDKENGIVKS
Ga0208790_105222313300025118MarineMNSKRYRIQQKLKPLYEIRTRVGTQFRKAREANDTDTLEIWERVWKAVAKEIVSLHEEAHEEKEVK
Ga0208790_110503623300025118MarineMTSKRYQIQQKLKPLYEIRTRIGTQFAKAKKANDTDTIEIWERVWKAVAKEIVALHDEAD
Ga0209434_115421133300025122MarineMTSRRYQIQQKLKPLYEIRTRVGTQFSKAKEANDTETIEIWERVWKAVAKEIVALHDETYAINDKEN
Ga0209644_1000144183300025125MarineMTSKRYQIQQKLKPLYEIRTRVGTQFGKAKEANDTDTIEIWERVWFAVTNEIVALHEDAHELKEKEIK
Ga0209644_106715023300025125MarineMTSKRYQIQQKLKPLYEIRTRVGTQFSKAREANDTETIEIWERVWKAVAKEIVALHDETYAINDKENGIVKS
Ga0209644_107002513300025125MarineMTSRRYQIQQKLKPLYEIRTRVGTQFRKAKDANDTDTIEIWERVWFAVTNEIVALHNETYEINDKENGIVKS
Ga0209644_114482313300025125MarineMPEPSKQYQLQQKLKPLYELRTRVSTQFRKAKDANDTDTIEIWERVWFAVTDEIVALHEERHELKEIK
Ga0208919_100215933300025128MarineMASRRYQIQQKLKPLYEIRTRVGTQFSKAKEANDTETIEIWERVWKAVAKEIVALHDETYAINDKENGIVKS
Ga0208919_117196023300025128MarineMPEPSKLYQTMQKLKPLYEIRTRIGTQFSKAKEANDTDTIEIWERVWKAVAAEIVALHEEAHEAKEDKPE
Ga0208919_119229613300025128MarineMTSKRYQIQQKLKPLYEIRTRIGTQFSKAKEANDTETIEIWERVWKAVAKEIVSLHEEAHEAKGVKXTIYILSFXMICEKVE
Ga0208299_112743823300025133MarineMTSKRYQIQQKLKPLYEIRTRVGTQFRKAREANDTDTIEIWERVWKAVAKEIVALHEDAHELKEVK
Ga0207893_102110913300025241Deep OceanMSHKNQSPRYQLQQKLKPLYEIRTRIGTQFRAAKAANDTDTIEIWERVWKAVAKEIVALH
Ga0207893_103342123300025241Deep OceanMSHNTSKLYQTMQKLKPLYELRTRVSTQFRKAKDANDTDTIEIWERVWKAVTDEIVALHNEKEMEVK
Ga0208179_110116923300025267Deep OceanMTSKRYQIQQKLKPLYEIRTRVGTQFRKAREANDTETIEIWERVWKAVAKEIVALHDETYAINDKENGIVKS
Ga0208181_100209713300025300Deep OceanMTSRRYQIQQKLKPLYEIRTRIGTQFSKAKEANDTETIEIWERVWKAVAKEIVALHDETYAIN
Ga0209252_115081913300025719MarineMTSKRYQIQQKLKPLYEIRTRCGTQFAKAKEANDTDTIEIWERVWKAVANEIVALHDE
Ga0209757_1006588813300025873MarineIQQKLKPLYEIRTRIGTQFRKAREANDTDTIEIWERVWKAVTDEIVALHNETYEINDKENGTVKS
Ga0209757_1008852513300025873MarineMTSRRYQIQQKLKPLYEIRTRISTQFRKAKDANDTETIEIWERVWNAVANEIVALHDETYEINDIERLAVREKEKLMKS
Ga0209757_1021341123300025873MarineMTSKRYQIQQKLKPLYEIRTRVSTQFGKAKEANDTDTIEIWERVWFAVTNEIVALHNETYEINDKENGIVKS
Ga0209757_1024530913300025873MarineMQKLKPLYELRTRVGTQFSKAKDANDTDTIEIWERVWKAVTDEIVALHNEKEMEVK
Ga0209815_114776533300027714MarineMPEPSKRYQIQQKLKPLYEIRTRVSTQFRKAKDANDTETIEIWERVWKAVANEIVALHEDAHELKEKEISDFEQFALDIE
Ga0209192_1030684513300027752MarineTQQNNPVLERDNMITSKRYQIQQKLKPLYEIRTRVSTQFRKAKEANDTETIEIWERVWKAVTNEIVALHDEAELKYSIFK
Ga0209709_1032500733300027779MarineMTSRRYQIQQKLKPLYEIRTRVGTQFGKAKEANDTETIEIWERVWKAVTNEIVALHDETYEINDKEKLMKS
(restricted) Ga0233415_1024618023300027861SeawaterMTSKRYQIQQKLKPLYEIRTRCGTQFAKAKEANDTDTIEIWERVWKAVANEIVALHDEAYAINTDKRHAK
Ga0257115_106868923300028706MarineMTSRRYQIQQKLKPLYEIRTRCGTQFAKAKEANDTETIEIWERVWKAVANEIVALHDEAYAINTDKRHAK
Ga0307488_1005434343300031519Sackhole BrineMTSKRYQIQQKLKPLYEIRTRIGTQFRKAREANDTDTLEIWERVWKAVAAEIVALHEEAHEAKENHV
Ga0302137_107245823300031588MarineMITSKRYQIQQKLKPLYEIRTRVSTQFRKAKKANDTETIEIWERVWKSVTNEIVALHDEAELKYTIFK
Ga0308019_1016295313300031598MarineMTSKRYQIQQKLKPLYEIRTRVSTQFRAAKEANDTDTIEIWERVWKAVAKEIVALHDEADLMKIAKT
Ga0302132_1032476413300031605MarineMTSKRYQIQQKLKPLYEIRTRIGTQFRKAREANDTDTLEIWERVWKAVAAEIVALHEEAH
Ga0302132_1042121313300031605MarineMTSKRYQLQQKLKPLYEIRTRISTQFRLAKEANDTDTIEIWERVWSAVANEIVALHDEAD
Ga0302119_1006689613300031606MarineMTSRRYQIQQKLKPLYEIRTRIGTQFGKAKEANDTDTIEIWERVWKAVAKEIVALHDEAHEIKLEKTSGITKD
Ga0302119_1018826413300031606MarineMKGTIMTSRRYQIQQKLKPLYEIRTRVSTQFRKAKDANDTETIEIWERVWKAVAAEIVALHEDAHELKEKEISDFEQFALDIE
Ga0302118_1012225233300031627MarineYEIRTRIGTQFGKAKEANDTDTIEIWERVWKAVAKEIVALHDEAHEIKLEKTSGITKD
Ga0302118_1018668413300031627MarineMTSKRYQIQQKLKPLYEIRTRIGTQFRMAKEANDTDTIEIWERVWFAVANEIVAL
Ga0315326_1012932423300031775SeawaterMTSKRYQIQQKLKPLYEIRTRVGTQFRKAKDANDTETIEIWERVYFAVAKEIIALHDETYAINDKENGIVKS
Ga0310122_1006431823300031800MarineMSHKNQSTRYQLQQKLKPLYEIRTRCGTQFAKAKKNGETDTIEIWERVWNAVAKEIVALHEECHELKEVK
Ga0315316_1022715143300032011SeawaterMPKPSKQYRIQQKLKPLYEIRTRIGTQFSKAKEANDTETIEIWERVWKAVAKEIVALHEENHKLKEVK
Ga0315324_1010432113300032019SeawaterMTSKRYQIQQKLKPLYEIRTRIGTQFRKAREANDTDTIEIWERVWKAVANEIVALHDEADLMKIA
Ga0315327_1022504023300032032SeawaterMTSKRYQIQQKLKPLYEIRTRVGTQFRKAKDANDTETIEIWERVWKAVAKEIVALHDETYAINDKENGIVKS
Ga0315327_1069909413300032032SeawaterMKGTKIMTSRIYQIQQKLKPLYEIRTRIGTQFSKAKEANDTETIEIWERVWKAVAKEIVALHDETYAINDKENGIVKS
Ga0315329_1005151113300032048SeawaterMTSKRYQVQQKLKPLYEIRTRVSTQFRAAKDANDTDTIEIWERVYFAVTNEIVALHDEAHELKSKANVGS
Ga0315329_1008521323300032048SeawaterMKGKIMTSRRYQIQQKLKPLYEIRTRVSTQFAKAKEANDTETIEIWERVWRAVANEIVALHEEAHEQKESQKS
Ga0315329_1047239323300032048SeawaterMPSKLYQTMQKLKPLYEIRTRVGTQFRKAKDANDTDTIEIWERVWFAVTDEIVALHDQKINTEN
Ga0315329_1063915813300032048SeawaterMTSRRYQIQQKLKPLYEIRTRVGTQFSKAKEANDTETIEIWERVWKAVAKEIVALHDETYEINDKENGIVKS
Ga0315334_1050647813300032360SeawaterMTSKRYQIQQKLKPLYEIRTRIGTQFRKAREANDTDTIEIWERVWKAVAAEIVALHDEADLMK
Ga0315334_1080745913300032360SeawaterMTSKRYQIQQKLKPLYEIRTRVGTQFRTAKDANDTETIEIWERVWKAVAKEIVALHDETYAINDKENGIVKS
Ga0315334_1166226823300032360SeawaterMTSKRYQVQQKLKPLYEIRTRVSTQFRAAKDANDTDTIEIWERVYFAVTNEIVALHDEAHELKSKANVSS


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