NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F092723

Metagenome Family F092723

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F092723
Family Type Metagenome
Number of Sequences 107
Average Sequence Length 41 residues
Representative Sequence MMYELKVPNGTYKADNLFRLFFVVFQHRLHHLIKDGKFMD
Number of Associated Samples 85
Number of Associated Scaffolds 107

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 38.32 %
% of genes near scaffold ends (potentially truncated) 30.84 %
% of genes from short scaffolds (< 2000 bps) 73.83 %
Associated GOLD sequencing projects 79
AlphaFold2 3D model prediction Yes
3D model pTM-score0.33

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (64.486 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine
(32.710 % of family members)
Environment Ontology (ENVO) Unclassified
(84.112 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(72.897 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 29.41%    β-sheet: 11.76%    Coil/Unstructured: 58.82%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.33
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 107 Family Scaffolds
PF16805Trans_coact 17.76
PF02511Thy1 10.28
PF08993T4_Gp59_N 10.28
PF14090HTH_39 6.54
PF08804gp32 3.74
PF05118Asp_Arg_Hydrox 3.74
PF00383dCMP_cyt_deam_1 1.87
PF12705PDDEXK_1 1.87
PF00111Fer2 1.87
PF03237Terminase_6N 1.87
PF08994T4_Gp59_C 1.87
PF02562PhoH 0.93
PF00145DNA_methylase 0.93
PF01503PRA-PH 0.93
PF01818Translat_reg 0.93
PF00271Helicase_C 0.93
PF16510P22_portal 0.93
PF01370Epimerase 0.93

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 107 Family Scaffolds
COG1351Thymidylate synthase ThyX, FAD-dependent familyNucleotide transport and metabolism [F] 10.28
COG3555Aspartyl/asparaginyl beta-hydroxylase, cupin superfamilyPosttranslational modification, protein turnover, chaperones [O] 3.74
COG0270DNA-cytosine methylaseReplication, recombination and repair [L] 0.93
COG1702Phosphate starvation-inducible protein PhoH, predicted ATPaseSignal transduction mechanisms [T] 0.93
COG1875Predicted ribonuclease YlaK, contains NYN-type RNase and PhoH-family ATPase domainsGeneral function prediction only [R] 0.93


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A64.49 %
All OrganismsrootAll Organisms35.51 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000101|DelMOSum2010_c10083918Not Available1397Open in IMG/M
3300000101|DelMOSum2010_c10152095All Organisms → cellular organisms → Archaea847Open in IMG/M
3300000949|BBAY94_10044572Not Available1235Open in IMG/M
3300001450|JGI24006J15134_10107083Not Available992Open in IMG/M
3300001771|Beebe_1012853Not Available1546Open in IMG/M
3300001781|Deep_1079444All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium590Open in IMG/M
3300002144|M2t2BS2_10264155All Organisms → Viruses → Predicted Viral1356Open in IMG/M
3300002242|KVWGV2_10187136Not Available505Open in IMG/M
3300003540|FS896DNA_10251555Not Available964Open in IMG/M
3300003702|PicMicro_10018036Not Available10582Open in IMG/M
3300004870|Ga0071103_149422All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon607Open in IMG/M
3300005838|Ga0008649_10043692All Organisms → Viruses → Predicted Viral2018Open in IMG/M
3300005913|Ga0075108_10013063All Organisms → Viruses → Predicted Viral3261Open in IMG/M
3300005969|Ga0066369_10260286All Organisms → cellular organisms → Archaea559Open in IMG/M
3300006002|Ga0066368_10040528All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1629Open in IMG/M
3300006002|Ga0066368_10079250Not Available1135Open in IMG/M
3300006002|Ga0066368_10097600Not Available1012Open in IMG/M
3300006002|Ga0066368_10176845Not Available729Open in IMG/M
3300006013|Ga0066382_10324682Not Available529Open in IMG/M
3300006019|Ga0066375_10197743Not Available626Open in IMG/M
3300006164|Ga0075441_10203066Not Available738Open in IMG/M
3300006166|Ga0066836_10862621Not Available547Open in IMG/M
3300006190|Ga0075446_10072010Not Available1040Open in IMG/M
3300006191|Ga0075447_10032579All Organisms → Viruses → Predicted Viral2001Open in IMG/M
3300006308|Ga0068470_1094524Not Available2343Open in IMG/M
3300006310|Ga0068471_1182054All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae2964Open in IMG/M
3300006310|Ga0068471_1388203All Organisms → cellular organisms → Archaea → DPANN group1100Open in IMG/M
3300006310|Ga0068471_1626342Not Available1038Open in IMG/M
3300006311|Ga0068478_1226995Not Available555Open in IMG/M
3300006339|Ga0068481_1349883Not Available760Open in IMG/M
3300006340|Ga0068503_10194334Not Available5028Open in IMG/M
3300006340|Ga0068503_10216719Not Available855Open in IMG/M
3300006340|Ga0068503_10366937Not Available1224Open in IMG/M
3300006340|Ga0068503_10369575Not Available1669Open in IMG/M
3300006347|Ga0099697_1163583Not Available1797Open in IMG/M
3300006754|Ga0098044_1038270Not Available2082Open in IMG/M
3300006900|Ga0066376_10095611Not Available1851Open in IMG/M
3300006921|Ga0098060_1116149Not Available752Open in IMG/M
3300006929|Ga0098036_1127037All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Podoviridae → unclassified Podoviridae → Puniceispirillum phage HMO-2011781Open in IMG/M
3300006947|Ga0075444_10018054All Organisms → Viruses → Predicted Viral3704Open in IMG/M
3300008216|Ga0114898_1051745All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1307Open in IMG/M
3300008219|Ga0114905_1032977Not Available1976Open in IMG/M
3300009172|Ga0114995_10209640All Organisms → Viruses → Predicted Viral1081Open in IMG/M
3300009172|Ga0114995_10362943Not Available795Open in IMG/M
3300009173|Ga0114996_10068703Not Available3106Open in IMG/M
3300009409|Ga0114993_10048812Not Available3390Open in IMG/M
3300009420|Ga0114994_10105296Not Available1919Open in IMG/M
3300009512|Ga0115003_10590071Not Available648Open in IMG/M
3300009605|Ga0114906_1004684All Organisms → cellular organisms → Bacteria6434Open in IMG/M
3300009703|Ga0114933_10024025All Organisms → Viruses → Predicted Viral4710Open in IMG/M
3300009786|Ga0114999_10501958Not Available936Open in IMG/M
3300010883|Ga0133547_10198975All Organisms → Viruses → Predicted Viral4271Open in IMG/M
3300010883|Ga0133547_11452196Not Available1291Open in IMG/M
3300011013|Ga0114934_10022744All Organisms → Viruses → Predicted Viral3458Open in IMG/M
3300011128|Ga0151669_115534All Organisms → Viruses → Predicted Viral2103Open in IMG/M
3300017775|Ga0181432_1085295Not Available927Open in IMG/M
3300017775|Ga0181432_1214486Not Available604Open in IMG/M
3300020372|Ga0211683_10023769All Organisms → Viruses → Predicted Viral2084Open in IMG/M
3300020376|Ga0211682_10027613All Organisms → Viruses → Predicted Viral2309Open in IMG/M
3300020382|Ga0211686_10284818Not Available678Open in IMG/M
3300020458|Ga0211697_10021969Not Available2725Open in IMG/M
3300020458|Ga0211697_10101557Not Available1194Open in IMG/M
3300020458|Ga0211697_10109734All Organisms → Viruses → Predicted Viral1144Open in IMG/M
3300020472|Ga0211579_10000086Not Available70671Open in IMG/M
3300021089|Ga0206679_10266284Not Available939Open in IMG/M
3300021375|Ga0213869_10087043All Organisms → Viruses → Predicted Viral1543Open in IMG/M
3300021979|Ga0232641_1392149Not Available528Open in IMG/M
3300024344|Ga0209992_10029220All Organisms → Viruses → Predicted Viral2836Open in IMG/M
3300024348|Ga0244776_10929398Not Available513Open in IMG/M
3300025128|Ga0208919_1074083All Organisms → Viruses → Predicted Viral1127Open in IMG/M
3300025138|Ga0209634_1272483All Organisms → cellular organisms → Archaea599Open in IMG/M
3300025188|Ga0207913_1021816Not Available1085Open in IMG/M
3300025267|Ga0208179_1021379Not Available1763Open in IMG/M
3300025267|Ga0208179_1069157All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium748Open in IMG/M
3300025280|Ga0208449_1080318Not Available805Open in IMG/M
3300025282|Ga0208030_1131473Not Available603Open in IMG/M
3300025652|Ga0208134_1114784All Organisms → cellular organisms → Archaea724Open in IMG/M
3300026087|Ga0208113_1028849Not Available1619Open in IMG/M
3300027622|Ga0209753_1042443Not Available1283Open in IMG/M
3300027687|Ga0209710_1066672All Organisms → Viruses → Predicted Viral1545Open in IMG/M
3300027709|Ga0209228_1036979Not Available1748Open in IMG/M
3300027779|Ga0209709_10079745Not Available1778Open in IMG/M
3300027813|Ga0209090_10455010Not Available605Open in IMG/M
3300027838|Ga0209089_10009061Not Available7720Open in IMG/M
3300027838|Ga0209089_10018514Not Available4968Open in IMG/M
3300027838|Ga0209089_10570576Not Available600Open in IMG/M
3300028197|Ga0257110_1137985Not Available991Open in IMG/M
3300028487|Ga0257109_1049548Not Available1350Open in IMG/M
3300028489|Ga0257112_10004319Not Available5352Open in IMG/M
3300031142|Ga0308022_1055530All Organisms → Viruses → Predicted Viral1225Open in IMG/M
3300031510|Ga0308010_1160566Not Available833Open in IMG/M
3300031594|Ga0302131_1018130All Organisms → Viruses → Predicted Viral2980Open in IMG/M
3300031598|Ga0308019_10178869Not Available830Open in IMG/M
3300031603|Ga0307989_1029996All Organisms → Viruses → Predicted Viral1210Open in IMG/M
3300031626|Ga0302121_10026391All Organisms → Viruses → Predicted Viral1927Open in IMG/M
3300031721|Ga0308013_10248344Not Available640Open in IMG/M
3300031800|Ga0310122_10172579All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1021Open in IMG/M
3300031800|Ga0310122_10320966Not Available677Open in IMG/M
3300031801|Ga0310121_10010026Not Available7492Open in IMG/M
3300031801|Ga0310121_10033204All Organisms → Viruses → Predicted Viral3602Open in IMG/M
3300031802|Ga0310123_10116740All Organisms → Viruses1846Open in IMG/M
3300031802|Ga0310123_10437010Not Available835Open in IMG/M
3300031802|Ga0310123_10673709Not Available631Open in IMG/M
3300032019|Ga0315324_10051789Not Available1527Open in IMG/M
3300032138|Ga0315338_1023543Not Available2822Open in IMG/M
3300032278|Ga0310345_10173185Not Available1942Open in IMG/M
3300032278|Ga0310345_11141146All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium762Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine32.71%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine10.28%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine9.35%
MarineEnvironmental → Aquatic → Marine → Oceanic → Aphotic Zone → Marine8.41%
Deep OceanEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean7.48%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine4.67%
SeawaterEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater2.80%
Deep SubsurfaceEnvironmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface2.80%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Seawater1.87%
MarineEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Marine1.87%
MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine1.87%
Hydrothermal Vent PlumeEnvironmental → Aquatic → Marine → Hydrothermal Vents → Unclassified → Hydrothermal Vent Plume1.87%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater1.87%
MarineEnvironmental → Aquatic → Marine → Oceanic → Abyssal Plane → Marine0.93%
MarineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine0.93%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous0.93%
SeawaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Seawater0.93%
MarineEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine0.93%
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine0.93%
Hydrothermal Vent FluidsEnvironmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Hydrothermal Vent Fluids0.93%
Diffuse Hydrothermal Flow Volcanic VentEnvironmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Diffuse Hydrothermal Flow Volcanic Vent0.93%
Marine, Hydrothermal Vent PlumeEnvironmental → Aquatic → Marine → Hydrothermal Vents → Unclassified → Marine, Hydrothermal Vent Plume0.93%
Marine SedimentEnvironmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Sediment0.93%
Saline LakeEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Lake0.93%
MarineEnvironmental → Aquatic → Unclassified → Unclassified → Unclassified → Marine0.93%
Macroalgal SurfaceHost-Associated → Algae → Green Algae → Ectosymbionts → Unclassified → Macroalgal Surface0.93%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000101Marine microbial communities from Delaware Coast, sample from Delaware MO Early Summer May 2010EnvironmentalOpen in IMG/M
3300000949Macroalgal surface ecosystem from Botany Bay, Sydney, Australia - BBAY94Host-AssociatedOpen in IMG/M
3300001450Marine viral communities from the Pacific Ocean - LP-53EnvironmentalOpen in IMG/M
3300001771Hydrothermal vent plume microbial communities from the Mid Cayman Rise - Beebe SitesEnvironmentalOpen in IMG/M
3300001781Hydrothermal vent plume microbial communities from the Mid Cayman Rise - Deep SitesEnvironmentalOpen in IMG/M
3300002144Marine microbial communities from the Baltic Sea, analyzing arctic terrigenous carbon compounds - M2t2BS2 (113f)EnvironmentalOpen in IMG/M
3300002242Marine sediment microbial communities from Kolumbo Volcano mats, Greece - white/grey matEnvironmentalOpen in IMG/M
3300003540Diffuse hydrothermal flow volcanic vent microbial communities from Axial Seamount, northeast Pacific ocean - Sample FS896_ElGuapo_DNAEnvironmentalOpen in IMG/M
3300003702Hydrothermal vent plume microbial communities from the Mid Cayman Rise - Piccard2013-Plume - Microbial AssemblyEnvironmentalOpen in IMG/M
3300004870Mid-Atlantic Ridge North Pond Expedition - Sample Bottom Water CTD 2012EnvironmentalOpen in IMG/M
3300005838Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S2LV_130m_DNAEnvironmentalOpen in IMG/M
3300005913Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UK1EnvironmentalOpen in IMG/M
3300005969Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S7_td_Bottom_ad_4513_LV_AEnvironmentalOpen in IMG/M
3300006002Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S7_td_NADW_ad_2505m_LV_AEnvironmentalOpen in IMG/M
3300006013Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S23_td_NADW_ad_2500m_LV_BEnvironmentalOpen in IMG/M
3300006019Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_NADW_ad_2500m_LV_AEnvironmentalOpen in IMG/M
3300006164Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG002-DNAEnvironmentalOpen in IMG/M
3300006166Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV91EnvironmentalOpen in IMG/M
3300006190Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG058-DNAEnvironmentalOpen in IMG/M
3300006191Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG104-DNAEnvironmentalOpen in IMG/M
3300006308Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_2_0500mEnvironmentalOpen in IMG/M
3300006310Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_3_0500mEnvironmentalOpen in IMG/M
3300006311Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT231_1_1000mEnvironmentalOpen in IMG/M
3300006339Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT232_3_0500mEnvironmentalOpen in IMG/M
3300006340Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_2_0770mEnvironmentalOpen in IMG/M
3300006347Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT224_1_1000mEnvironmentalOpen in IMG/M
3300006754Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaGEnvironmentalOpen in IMG/M
3300006900Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_Bottom_ad_5009_LV_AEnvironmentalOpen in IMG/M
3300006921Marine viral communities from the Subarctic Pacific Ocean - 21_ETSP_OMZ_AT15319 metaGEnvironmentalOpen in IMG/M
3300006929Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaGEnvironmentalOpen in IMG/M
3300006947Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG017-DNAEnvironmentalOpen in IMG/M
3300008216Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_GeostarEnvironmentalOpen in IMG/M
3300008219Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_b05EnvironmentalOpen in IMG/M
3300009172Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_154EnvironmentalOpen in IMG/M
3300009173Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_134EnvironmentalOpen in IMG/M
3300009409Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_150EnvironmentalOpen in IMG/M
3300009420Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_152EnvironmentalOpen in IMG/M
3300009512Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_88EnvironmentalOpen in IMG/M
3300009605Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_M9EnvironmentalOpen in IMG/M
3300009703Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 4SBTROV12_W25 metaGEnvironmentalOpen in IMG/M
3300009786Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_126EnvironmentalOpen in IMG/M
3300010883western Arctic Ocean co-assemblyEnvironmentalOpen in IMG/M
3300011013Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 4SBTROV10_white metaGEnvironmentalOpen in IMG/M
3300011128Seawater microbial communities from Japan Sea near Toyama Prefecture, Japan - 2014_2, 0.02EnvironmentalOpen in IMG/M
3300017775Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 55 SPOT_SRF_2014-07-17EnvironmentalOpen in IMG/M
3300020372Marine microbial communities from Tara Oceans - TARA_B100000787 (ERX556133-ERR599090)EnvironmentalOpen in IMG/M
3300020376Marine microbial communities from Tara Oceans - TARA_B100000795 (ERX555997-ERR599121)EnvironmentalOpen in IMG/M
3300020382Marine microbial communities from Tara Oceans - TARA_B100000780 (ERX556058-ERR599059)EnvironmentalOpen in IMG/M
3300020458Marine microbial communities from Tara Oceans - TARA_B100000749 (ERX556123-ERR599000)EnvironmentalOpen in IMG/M
3300020472Marine microbial communities from Tara Oceans - TARA_B100001250 (ERX556017-ERR598995)EnvironmentalOpen in IMG/M
3300021089Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 100m 12015EnvironmentalOpen in IMG/M
3300021375Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO132EnvironmentalOpen in IMG/M
3300021979Hydrothermal fluids microbial communities from Mariana Back-Arc Basin vent fields, Pacific Ocean - Hafa_FS926 _150kmerEnvironmentalOpen in IMG/M
3300024344Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaG (SPAdes)EnvironmentalOpen in IMG/M
33000243480.2um to 3um size fraction coassemblyEnvironmentalOpen in IMG/M
3300025128Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025138Marine viral communities from the Pacific Ocean - LP-40 (SPAdes)EnvironmentalOpen in IMG/M
3300025188Marine microbial communities from the Deep Atlantic Ocean - MP2913 (SPAdes)EnvironmentalOpen in IMG/M
3300025267Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_Geostar (SPAdes)EnvironmentalOpen in IMG/M
3300025280Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s17 (SPAdes)EnvironmentalOpen in IMG/M
3300025282Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_M9 (SPAdes)EnvironmentalOpen in IMG/M
3300025652Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (SPAdes)EnvironmentalOpen in IMG/M
3300026087Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S7_td_NADW_ad_2505m_LV_A (SPAdes)EnvironmentalOpen in IMG/M
3300027622Marine microbial communities from oxygen minimum zone in mesopelagic equatorial Pacific - METZYME_3_550m (SPAdes)EnvironmentalOpen in IMG/M
3300027687Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_138 (SPAdes)EnvironmentalOpen in IMG/M
3300027709Marine microbial communities from oxygen minimum zone in mesopelagic equatorial Pacific - METZYME_3_150m (SPAdes)EnvironmentalOpen in IMG/M
3300027779Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_136 (SPAdes)EnvironmentalOpen in IMG/M
3300027813Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_152 (SPAdes)EnvironmentalOpen in IMG/M
3300027838Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_150 (SPAdes)EnvironmentalOpen in IMG/M
3300028197Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2015_P26_10mEnvironmentalOpen in IMG/M
3300028487Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2011_P26_2000mEnvironmentalOpen in IMG/M
3300028489Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2015_P26_1000mEnvironmentalOpen in IMG/M
3300031142Marine microbial communities from water near the shore, Antarctic Ocean - #353EnvironmentalOpen in IMG/M
3300031510Marine microbial communities from water near the shore, Antarctic Ocean - #129EnvironmentalOpen in IMG/M
3300031594Marine microbial communities from Western Arctic Ocean, Canada - CB9_20mEnvironmentalOpen in IMG/M
3300031598Marine microbial communities from water near the shore, Antarctic Ocean - #284EnvironmentalOpen in IMG/M
3300031603Marine microbial communities from Ellis Fjord, Antarctic Ocean - #185EnvironmentalOpen in IMG/M
3300031626Marine microbial communities from Western Arctic Ocean, Canada - CB21_surfaceEnvironmentalOpen in IMG/M
3300031721Marine microbial communities from water near the shore, Antarctic Ocean - #181EnvironmentalOpen in IMG/M
3300031800Marine microbial communities from Western Arctic Ocean, Canada - CB6_Bottom_1051EnvironmentalOpen in IMG/M
3300031801Marine microbial communities from Western Arctic Ocean, Canada - CB27_Tmax_986EnvironmentalOpen in IMG/M
3300031802Marine microbial communities from Western Arctic Ocean, Canada - CB6_AW_1057EnvironmentalOpen in IMG/M
3300032019Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 21515EnvironmentalOpen in IMG/M
3300032138Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - ASW #8EnvironmentalOpen in IMG/M
3300032278Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-500_MGEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
DelMOSum2010_1008391833300000101MarineMYTLKVPNGTYKSDSLFVLFWTVIKHRIHHLIKDGKFDD*
DelMOSum2010_1015209523300000101MarineMTYELKVPNGTYTANNLFVLFFTVVKHRLHHLIKDRKFMD*
BBAY94_1004457253300000949Macroalgal SurfaceMMYELKVPNGTYKADNLFRLFFVVLQHRLKHLIKDGKFMD*
JGI24006J15134_1010708333300001450MarineMTYELKVPNGTYMANNLFVLFFTVVKHRLHHLIKDGKFMD*
Beebe_101285323300001771Hydrothermal Vent PlumeMYELKVPNGTYKADNLFWLLIALFRHRFQHLIKNGKFMD*
Deep_107944423300001781Hydrothermal Vent PlumeMYHTVGRIHNIMYELKVPDGTYKADNLFWLLTAVFRHRFQHLI
M2t2BS2_1026415523300002144MarineMTYELKVPNGKYTADSLFVLFFIVVKHRLHHLIKDKKFMD*
KVWGV2_1018713623300002242Marine SedimentKTGATTDMTYELKVPNGTYKSDNLFWLLVAVFKHRLHHLIKDGKYMD*
FS896DNA_1025155533300003540Diffuse Hydrothermal Flow Volcanic VentMMYELKVPNGTYKADNLFRLFFVVFQHRLHHLIKDGKFKD*
PicMicro_1001803693300003702Marine, Hydrothermal Vent PlumeMYTLKVPNGIYKSDSLFVLFYTVLKHRFYHLVKDGKFHD*
Ga0071103_14942223300004870MarineMYELKVPDGTYKADNLFWLLIAVFRHRFQHLIKNGKFMD*
Ga0008649_1004369243300005838MarineMTYELKVKNGTYTADNLFALFFNVVRHRLHHLIKDKKFMD*
Ga0075108_1001306353300005913Saline LakeMKYELKVPNGTYTANNLFVLFFDVFTHRLYHLIKDRKFMD*
Ga0066369_1026028613300005969MarineMYELKVPDGTYKADNLFWLLIAVFRHRFQHLIKDRKFMD*
Ga0066368_1004052853300006002MarineMYELKVPSGTYKADNLFWLLIAVFRHRFQHLIKNGKFMD*
Ga0066368_1007925033300006002MarineMMYELKVPNGTYKADNLFRLFFVVFQHRLKHLIKDGKFMD*
Ga0066368_1009760033300006002MarineMYELKVPNGKYTANNLFVLFFTIVKHRLYHLIKDKKFMD*
Ga0066368_1017684533300006002MarineLSTKTSTVTNMMYELKVPNGTYKADNLFRLFFVVFQHRLHHLIKDGKFKD*
Ga0066382_1032468223300006013MarineMKYELKVPNGTYKADNLFRLFFVVFQHRLHHLIKDGKFKD*
Ga0066375_1019774313300006019MarineMYLTVERTRNIMYELKVPDGTYKADNLFWLLIAVFRHRFQHLIKNGKFMD*
Ga0075441_1020306623300006164MarineMYTLKVPNGTYKSDSLFILFWTVIRHRLYHLIKDGKFND*
Ga0066836_1086262133300006166MarineYTLKVPNGTYKSDSLIILMWTVFRHRLHHLIKDGKFDD*
Ga0075446_1007201043300006190MarineMKYKLKVQNGTYTADNLFVLFFTVVKHRLHHLIKDKKFMD*
Ga0075447_1003257963300006191MarineMTYELKVPNGTYTADNLFALFFNVVRHRLHHLIKDKKFMD*
Ga0068470_109452433300006308MarineMIYELKVPNGTYKADNLFILFFVVFRHRLKHLIKDGKFMD*
Ga0068471_118205473300006310MarineMTYFDINTGMSYELKVPNGTYKADNLFKLFFVVFRHRLKHLIKDGKFMD*
Ga0068471_138820343300006310MarineMYELKVPNGTYKSHNLFWLLVAVFKHRLHHLVKDGKYMD*
Ga0068471_162634233300006310MarineMYELKVPNGTYKANTLLRLLIAVFQHRLQHLIKDGKYMD*
Ga0068478_122699523300006311MarineMIYELKVPNGTYKADNLFRLFFVVFQHRLYHLIKDGKFMD*
Ga0068481_134988323300006339MarineMYELKVPNGTYKANTLLRLLIVVFHHRLRHLIKDGKYMD*
Ga0068503_1019433423300006340MarineMTYELKVPNGTYKSDNLFKLFFVVFQHRLYHLIKDGKFMD*
Ga0068503_1021671913300006340MarineKTSTITNMTYELKVPNGKYKSDSLFWLLVIVFRHRLYHLIKDGKFMD*
Ga0068503_1036693733300006340MarineMYELRVPNGTYKSDSLFRLFVTVLRHRLDHLIKDGKFMD*
Ga0068503_1036957553300006340MarineMMYELKVPNGTYKADNLFRLFFVVFQHRLHHLIKDGKFMD*
Ga0099697_116358373300006347MarineMMYELKVPNGTYKADNLFKLFFVVFQHRLYHLIKDGKFMD*
Ga0098044_103827013300006754MarineMYTLKVPNGTYKSDSLIDLMWRVFRHRLHHLIKDGNFDD*
Ga0066376_1009561123300006900MarineMYELKVPDGTYKADNLFWLLITIFKHRFQHLIKDGKFMD*
Ga0098060_111614913300006921MarineMYTLKVPNGTYKSDSLINLIWKVFRHRLHHLIKEGKFDD*
Ga0098036_112703733300006929MarineMYTLKVPNGTYKSDSLIDLIWKVFRHRLHHLIKEGKFDD*
Ga0075444_1001805423300006947MarineMTYELKVPNGTYTANNLFALFFTVVKHRLHHLIKDGKFMD*
Ga0114898_105174523300008216Deep OceanMYELKVPSGTYKDDNLFWLLVSVFKHRFQHLIKDGRFID*
Ga0114905_103297743300008219Deep OceanMTYELKVPNGTYKADNLFRLFFVVFQHRLHHLIKDGKFKD*
Ga0114995_1020964023300009172MarineMIYELKVPNGTYTADNLFALFFNVVKHRLHHLIKDKKFMD*
Ga0114995_1036294333300009172MarineNMTYELKVPNGTYTADNLFALFFNVVKHRLHHLIKDKKFMD*
Ga0114996_1006870353300009173MarineMKYQLKVQNGTYTADNLFVLFFTVVKHRLHHLIKDKKFMD*
Ga0114993_1004881263300009409MarineMIYELKVPNGKYTANNLFVLFFTVVKHRLHHLIKDRKFMD*
Ga0114994_1010529643300009420MarineMTYELKVPNGTYTADNLFALFFNVVKHRLHHLIKDKKFMD*
Ga0115003_1059007123300009512MarineMTYELKVPNGTYTANNLFALFFTVVKHRLHHLIKDRKFMD*
Ga0114906_100468453300009605Deep OceanMYTLKVPNGTYKADSLIHLLWAVFCHRFHHLITHGKFID*
Ga0114933_1002402533300009703Deep SubsurfaceMYELKVPNGTYKSDNLFWLLVAVFKHRLHHLIKDGKYMD*
Ga0114999_1050195813300009786MarineGSTPNMTYELKVPNGTYTADNLFALFFNVVKHRLHHLIKDKKFMD*
Ga0133547_1019897523300010883MarineMMYELKVPNGTYKADNLFRLFFVVFRHRLKHLIKDGKFKD*
Ga0133547_1145219633300010883MarineMYTLKVPNGTYKSDNLFVLFYIVLKHRLYHLAKDGKFQD*
Ga0114934_1002274463300011013Deep SubsurfaceMYTLKVPNGTYKSDSLFVLFWTVIRHRLHHLIKDGKFDD*
Ga0151669_11553433300011128MarineMKHLKEVPNGTYTADNLFALFFNVVRHRLHHLIKDKKFMD*
Ga0181432_108529533300017775SeawaterMYELKVKNGTYKADNLFWLMWAVFYHRMEHLIQDGKFQD
Ga0181432_121448613300017775SeawaterRIELSTKTSTITNMMYELKVPNGTYKADNLFRLFFVVFQHRLKHLIKDGKFMD
Ga0211683_1002376913300020372MarineMTYELKVPNGTYTADNLFALFFNVVRHRLHHLIKDKKF
Ga0211682_1002761353300020376MarineMKYKLKVQNGTYTADNLFVLFFTVVKHRLHHLIKDKKFMD
Ga0211686_1028481813300020382MarineSRLKFSTSPSTTPRMKYKLKVQNGTYTADNLFVLFFTVVKHRLHHLIKDKKFMD
Ga0211697_1002196913300020458MarineMYELKVKNGVYKADSLFALVKAVLIHRFRHLINDGKWMD
Ga0211697_1010155713300020458MarineMYELKVPDGTYKADNLFWLLIAVFRHRFQHLIKNGK
Ga0211697_1010973443300020458MarineITNTMYELKVPNGTYKSENLFWLLVAIFKHRLHHLVKDGKFMD
Ga0211579_10000086503300020472MarineMYELKVPNGTYKSDNLFWLFVAVFRHRFHHLIKDRKWMD
Ga0206679_1026628413300021089SeawaterYTLKVPNGTYKSDSLFILFWTVIRHRLYHLIKDGKYDD
Ga0213869_1008704353300021375SeawaterYELKVPNGTYTANNLFVLFFTVVKHRLHHLIKDRKFMD
Ga0232641_139214923300021979Hydrothermal Vent FluidsMYELKVPDGTYKADNLFWLLIAVFRHRFQHLIKNGKFMD
Ga0209992_1002922053300024344Deep SubsurfaceMYTLKVPNGTYKSDSLFVLFWTVIRHRLHHLIKDGKFDD
Ga0244776_1092939813300024348EstuarineMIYELKVPNGTYTANNLFVLFFTVVKHRLHHLIKDRKF
Ga0208919_107408353300025128MarineMYTLKVPNGTYKSDSLIDLIWKVFRHRLHHLIKEGKFDD
Ga0209634_127248323300025138MarineMIYELKVPNGTYTADNLFALFFNVVKHRLHHLIKDKKFMD
Ga0207913_102181613300025188Deep OceanIHNIMYELKVPDGTYKADNLFWLLIAVFRHRFQHLIKDRKFMD
Ga0208179_102137953300025267Deep OceanLKVPDGTYKADNLFWLLIAVFRHRFQHLIKNGKFMD
Ga0208179_106915723300025267Deep OceanMYELKVPSGTYKDDNLFWLLVSVFKHRFQHLIKDGRFID
Ga0208449_108031823300025280Deep OceanMTYELKVPNGTYKADNLFRLFFVVFQHRLHHLIKDGKF
Ga0208030_113147313300025282Deep OceanYELKVPNGTYKADNLFRLFFVVFQHRLHHLIKDGKFKD
Ga0208134_111478423300025652AqueousMTYELKVPNGTYTANNLFVLFFTVVKHRLHHLIKDRKFMD
Ga0208113_102884933300026087MarineMMYELKVPNGTYKADNLFRLFFVVFQHRLKHLIKDGKFMD
Ga0209753_104244343300027622MarineMYELKVPNGTYKADSLFLLFVAVFRHRFYHLVHDGKFQD
Ga0209710_106667253300027687MarineMTYELKVPNGTYTADNLFALFFNVVKHRLHHLIKDKKFMD
Ga0209228_103697913300027709MarineVYTLKVPNGTYKSDSLIILMWTVFRHRLHHLIKDGKFD
Ga0209709_1007974553300027779MarineMKYQLKVQNGTYTADNLFVLFFTVVKHRLHHLIKDKKFMD
Ga0209090_1045501013300027813MarinePSSTGTTPRMTYELKVPNGTYTANNLFVLFFTVVKHRLHHLIKDRKFMD
Ga0209089_1000906193300027838MarineMIYELKVPNGKYTANNLFVLFFTVVKHRLHHLIKDRKFMD
Ga0209089_1001851453300027838MarineMMYELKVPNGTYKADNLFRLFFVVFQHRLHHLIKDGKFMD
Ga0209089_1057057613300027838MarineMIYELKVPNGTYKADNLFILFFVVFRHRLKHLIKDGK
Ga0257110_113798533300028197MarineTGTTSSMTYELKVPNGTYTANNLFVLFFTVVKHRLHHLIKDRKFMD
Ga0257109_104954833300028487MarineMKYELKVPNGTYKADNLFRLFFVVFQHRLHHLIKDGKFVD
Ga0257112_1000431993300028489MarineMTYELKVPNGTYKSNSLFWLVVLVLRHRLMHLIKDRKFMD
Ga0308022_105553043300031142MarineMTYELKVPNGTYTADNLFALFFNVVRHRLHHLIKDKKFMD
Ga0308010_116056633300031510MarineSRLKFPTSPSTTPRMKYKLKVQNGTYTADNLFVLFFTVVKHRLHHLIKDKKFMD
Ga0302131_101813023300031594MarineMTYELKVPNGTYTANNLFALFFTVVKHRLHHLIKDREFMD
Ga0308019_1017886933300031598MarineKFPTSPSTTPNMKYKLKVQNGTYTADNLFVLFFTVVKHRLHHLIKDKKFMD
Ga0307989_102999653300031603MarineSTPNMIYELKVPNGTYTADNLFALFFNVVKHRLHHLIKDKKFMD
Ga0302121_1002639163300031626MarineKVPNGTYTADNLFALFFNVVKHRLHHLIKDKKFMD
Ga0308013_1024834423300031721MarinePSTTPRMTYELKVPNGTYTADNLFALFFNVVKHRLHHLIKDKKFMD
Ga0310122_1017257913300031800MarineMYELKVPNGTYKADNLFWLLIAVFRHRFQHLIKNRK
Ga0310122_1032096623300031800MarineRTHNIMYELKVPNGTYKADNLFWLLIAVFRHRFQHLIKNRKFMD
Ga0310121_1001002623300031801MarineMMYELKVPNGTYKADNLFRLFFVVFRHRLKHLIKDGKFKD
Ga0310121_1003320463300031801MarineMYTLKVPNGTYKSDNLFVLFYTVLKHRLYHLAKDGKFQD
Ga0310123_1011674023300031802MarineMKNIKYEYELKVPNGTYKADNLFWLLITVFGHRFHHLIKDRKFMD
Ga0310123_1043701013300031802MarineMYELKVPDGTYKADNLFWLLIAVFRHRFQHLIKNRKFM
Ga0310123_1067370923300031802MarineMYELKVPDGTYKADNLFWLLIAVFRHRFQHLIKDGKFMD
Ga0315324_1005178953300032019SeawaterKVPNGTYKSDSLFILFWTVIRHRLYHLIKDGKYDD
Ga0315338_102354343300032138SeawaterMIYELKVPNGTYKADNLFILFFVVFRHRLKHLIKDGKFMD
Ga0310345_1017318533300032278SeawaterMYELKVPNGTYKANTLLRLLIAVFQHRLQHLIKDGKYMD
Ga0310345_1114114613300032278SeawaterMMYELKVPNGTYKADNLFRLFFVVFQHRLKHLIKD


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