Metagenome Family F092711

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F092711
Family Type	Metagenome
Number of Sequences	107
Average Sequence Length	75 residues
Representative Sequence	MVQLEVTLTGRSKSFTADTLQDCAKQFFDEYGEASKEVVKCQTFEVNNPTEFLIVGGNESCIGYLKQMQQGAIDDK
Number of Associated Samples	74
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	70.09 %
% of genes near scaffold ends (potentially truncated)	27.10 %
% of genes from short scaffolds (< 2000 bps)	78.50 %
Associated GOLD sequencing projects	60
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Unclassified (73.832 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (40.187 % of family members)
Environment Ontology (ENVO)	Unclassified (89.720 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (85.981 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84 1DelMOSum2011_100702654 2DelMOSpr2010_100406765 3DelMOSpr2010_100606483 4DelMOSpr2010_100952373 5JGI20160J14292_100251206 6JGI20159J14440_101745663 7JGI24006J15134_100263828 8JGI24006J15134_100264367 9JGI24006J15134_100800364 10JGI24003J15210_100123057 11JGI24003J15210_101320902 12JGI24004J15324_100209143 13JGI24004J15324_100509914 14JGI24005J15628_100680114 15JGI24005J15628_100897291 16JGI24005J15628_101994343 17KVWGV2_108414193 18Ga0065861_10630234 19Ga0066222_10944142 20Ga0066223_12319422 21Ga0076924_10946051 22Ga0076924_13065951 23Ga0075441_103338972 24Ga0075447_100507013 25Ga0075444_102472202 26Ga0075444_103456152 27Ga0114916_11528752 28Ga0102957_13466032 29Ga0115566_100264602 30Ga0102814_107043591 31Ga0114995_100897541 32Ga0114995_101279653 33Ga0115551_14526291 34Ga0114994_104031581 35Ga0114994_104524253 36Ga0114994_106145573 37Ga0114997_102928002 38Ga0114915_10715422 39Ga0114915_10921074 40Ga0114915_11040581 41Ga0115556_12218302 42Ga0115561_13809382 43Ga0115557_10369482 44Ga0115572_103508513 45Ga0115004_106060071 46Ga0115004_106764123 47Ga0114914_10072682 48Ga0115001_109777421 49Ga0181377_100278812 50Ga0181416_10394721 51Ga0181433_10093395 52Ga0181414_11726613 53Ga0206131_1000056215 54Ga0211682_103023643 55Ga0211687_102600331 56Ga0211577_100924397 57Ga0207905_10107225 58Ga0207890_10668051 59Ga0209535_10122492 60Ga0209535_10332893 61Ga0209535_11023951 62Ga0209535_11207842 63Ga0209535_11596231 64Ga0209535_12140051 65Ga0209336_100967733 66Ga0209336_100983211 67Ga0209336_101243433 68Ga0209336_101923772 69Ga0209634_10356493 70Ga0209634_10878655 71Ga0209634_10943421 72Ga0209634_11610284 73Ga0209337_11335963 74Ga0209337_11549882 75Ga0208031_10226322 76Ga0208031_10339533 77Ga0208032_10206403 78Ga0208814_10228543 79Ga0208814_10901082 80Ga0208148_10195436 81Ga0209716_10201194 82Ga0208134_10666822 83Ga0209600_11849201 84Ga0209308_101563643 85Ga0209223_101480004 86Ga0209384_10233491 87Ga0209384_10342694 88Ga0209482_10252722 89Ga0209383_10349854 90Ga0209710_10225468 91Ga0209192_101174213 92Ga0209502_103197852 93Ga0209711_102468563 94Ga0209090_103291882 95Ga0256368_10222044 96Ga0256368_10270624 97Ga0308010_10252038 98Ga0307488_102234904 99Ga0307488_107278062 100Ga0308014_10521573 101Ga0308004_103341741 102Ga0308012_102904782 103Ga0307984_12091291 104Ga0308011_101297721 105Ga0308017_10566562 106Ga0308002_10915872 107Ga0314858_059802_539_769
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84 1DelMOSum2011_100702654 2JGI24005J15628_100680114 3KVWGV2_108414193 4Ga0209384_10233491
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84 1DelMOSum2011_100702654 2JGI24005J15628_100680114 3KVWGV2_108414193 4Ga0209384_10233491
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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 34.21% β-sheet: 25.00% Coil/Unstructured: 40.79%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF01381	HTH_3	18.69
PF04098	Rad52_Rad22	1.87
PF08291	Peptidase_M15_3	0.93
PF08279	HTH_11	0.93

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	26.17 %
Unclassified	root	N/A	73.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.83 %
Viruses	superkingdom	All Organisms → Viruses	26.17 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	11.21 %
Unclassified	root	N/A	73.83 %
unclassified viruses	clade	All Organisms → Viruses → unclassified viruses	14.02 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	11.21 %
Unclassified	root	N/A	73.83 %
unclassified DNA viruses	no rank	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses	14.02 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	11.21 %
Unclassified	root	N/A	73.83 %
unclassified dsDNA viruses	no rank	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses	14.02 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	11.21 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	14.02 %
Unclassified	root	N/A	73.83 %

Visualization
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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000115\|DelMOSum2011_c10070265	All Organisms → Viruses → Predicted Viral	1266	Open in IMG/M
3300000116\|DelMOSpr2010_c10040676	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	2100	Open in IMG/M
3300000116\|DelMOSpr2010_c10060648	Not Available	1592	Open in IMG/M
3300000116\|DelMOSpr2010_c10095237	All Organisms → Viruses → Predicted Viral	1137	Open in IMG/M
3300001349\|JGI20160J14292_10025120	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	3230	Open in IMG/M
3300001353\|JGI20159J14440_10174566	Not Available	605	Open in IMG/M
3300001450\|JGI24006J15134_10026382	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	2603	Open in IMG/M
3300001450\|JGI24006J15134_10026436	Not Available	2600	Open in IMG/M
3300001450\|JGI24006J15134_10080036	Not Available	1226	Open in IMG/M
3300001460\|JGI24003J15210_10012305	Not Available	3420	Open in IMG/M

Showing 1 to 10 of 107 entries

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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	99.07%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	0.93%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	9.35%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	0.93%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.93%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	6.54%
Oceanic	Environmental → Aquatic → Marine → Oceanic	49.53%
Pelagic	Environmental → Aquatic → Marine → Pelagic	9.35%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	0.93%
Strait	Environmental → Aquatic → Marine → Strait	2.80%
Unclassified	Environmental → Aquatic → Marine → Unclassified	19.63%

Habitat	Taxonomy	Distribution
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	0.93%
Sediment	Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment	0.93%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	49.53%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	19.63%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	9.35%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	9.35%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	6.54%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	2.80%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	1.87%
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	9.35%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	0.93%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	40.19%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	10.28%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	9.35%
Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine	3.74%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	2.80%
Marine Sediment	Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Sediment	0.93%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	8.41%
Pelagic Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine	2.80%
Pond Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water	0.93%
Sackhole Brine	Environmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine	1.87%
Sea-Ice Brine	Environmental → Aquatic → Marine → Coastal → Unclassified → Sea-Ice Brine	2.80%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	2.80%
Seawater	Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater	0.93%

Visualization
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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000115	Marine microbial communities from Delaware Coast, sample from Delaware MO Summer July 2011	Environmental	Open in IMG/M
3300000116	Marine microbial communities from Delaware Coast, sample from Delaware MO Spring March 2010	Environmental	Open in IMG/M
3300001349	Pelagic Microbial community sample from North Sea - COGITO 998_met_10	Environmental	Open in IMG/M
3300001353	Pelagic Microbial community sample from North Sea - COGITO 998_met_09	Environmental	Open in IMG/M
3300001450	Marine viral communities from the Pacific Ocean - LP-53	Environmental	Open in IMG/M
3300001460	Marine viral communities from the Pacific Ocean - LP-28	Environmental	Open in IMG/M
3300001472	Marine viral communities from the Pacific Ocean - LP-32	Environmental	Open in IMG/M
3300001589	Marine viral communities from the Pacific Ocean - LP-40	Environmental	Open in IMG/M
3300002242	Marine sediment microbial communities from Kolumbo Volcano mats, Greece - white/grey mat	Environmental	Open in IMG/M
3300004448	Marine viral communities from Newfoundland, Canada BC-1	Environmental	Open in IMG/M

Showing 1 to 10 of 74 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
DelMOSum2011_100702654	3300000115	Marine	MVQLEVTLTGRSKSFTGETLQDCAKQFFDEYGEAIKEVVKCHTFETTDPTQFMSIGGNESCVGWLKQMQQGVIDDK*
DelMOSpr2010_100406765	3300000116	Marine	MVQLEVTLTGRSKSFTADTLQNCAKQFFDEYGEASKEVVKCHTFETNDPTQFMSIGGNESCVAWLKQMQQGEINDK*
DelMOSpr2010_100606483	3300000116	Marine	MVQLEVTLTGRSKTFTGDTLQDCAKQFFDEYGEASKEIVKCQTFEVNNPAEFLIVGGNESCIGYLKQMQQGAIDDK*
DelMOSpr2010_100952373	3300000116	Marine	MVQLEITLTGRSKSFTGETLQDCAKQFFDEFGEASKEVVKCQTFEVNNPTEFLIVGGNESCLGYLKQMQQGVIDDK*
JGI20160J14292_100251206	3300001349	Pelagic Marine	MVQLEITLTGRSKSFTGDTLQDCAKQFFDEYGEASKEVVKCHTFETNDPTQFMSIGGNESCVAWLKQMQQGAIDDK*
JGI20159J14440_101745663	3300001353	Pelagic Marine	KSFTGDTLQXCAKQFFDEYGEASKEVVKCHTFETNDPTQFMSIGGNESCVAWLKQMQQGAIDDK*
JGI24006J15134_100263828	3300001450	Marine	MVQLEVTLTGRSKSFTADTLQDCAKQFFDEYGEASKEVVKCHTFETNDPTQFMSIGGNESCIGWLNQIKQGVIDDK*
JGI24006J15134_100264367	3300001450	Marine	MVQLEVTLTGRSKSFTGDTLQDCAKQFFNDYGEASKEVVKCYTFESSDPKQYMSIGGNESCLVWLKQMQQGVIDDK*
JGI24006J15134_100800364	3300001450	Marine	MVQLEVTLTGRSKSFTGKTLQDCAKQFFNEYGEASKEVIKCHTFQTTDPTQFMSIGGNESCLAWLKQMQQGVIDDK*
JGI24003J15210_100123057	3300001460	Marine	MVQLEVTLTGRSKSFTADTLQDCAKQFFDEYGEASEEVVKCQTFEVNNPAEFLIVGGNESCIGYLKQMQQGAINDK*
JGI24003J15210_101320902	3300001460	Marine	MVQLEITLTGRSKTFTAETLQDCAKQFFDEFGEASKEVVKCQTFEVNNPTEFLIVGGNESCIGYLKQMQQGAIDDK*
JGI24004J15324_100209143	3300001472	Marine	MVQLEVTLTGRSKSFTGETLQDCAKQFFDEYGEAXKEVVKCHTFETTDPTQFMSIGGNESCIGLVKTNATRSNR*
JGI24004J15324_100509914	3300001472	Marine	QLEVTLTGRSKSFTGETLQDCAKQFFDEFGEASKEVVKCHTFETNDPTQFMSIGGNESCIGWLNQIKQGVIDDK*
JGI24005J15628_100680114	3300001589	Marine	TLTGRSKSFTADTLQDCAKQFFDEYGEASKEVVKCQTFEVNNPTEFLIVGGNESCLGYLKQMQQGAIDDK*
JGI24005J15628_100897291	3300001589	Marine	VTLTGRSKSFTADTLQDCAKQFFDEFGEASKEVVKCQTFEVNNPTEFLIVGGNESCIGYLKQMQQGAINDK*
JGI24005J15628_101994343	3300001589	Marine	RSKSFTADTLQDCAKQFFDEYGEASKEVVKCHTFETNDPTQFMSIGGNESCIGWLNQIKQGVIDDK*
KVWGV2_108414193	3300002242	Marine Sediment	MVQLEITLVGREKSFTAETLQECVEKFYDGYGEAEHEVVKYHTFEASDPSESMSISGNKSCVAWLKQMKQGVINEK*
Ga0065861_10630234	3300004448	Marine	MVQLEVTLTGRSKSFTADTLQDCAKQFFDEYGEASKEVVKCQTFEVNNPTEFLIVGGNESCIGYLKQMQQGAIDDK*
Ga0066222_10944142	3300004460	Marine	MVQLEVTLTGRSKTFTADTLQDCAKQFFDEYGEASKEVVKCQTSEVNNPTEFLIVGGNESCIGYLKQMQQGAIDDK*
Ga0066223_12319422	3300004461	Marine	MVQLEVTLTGRSKSFTADTLQDCAKQFFDEFGESIHEVTKCHTFETNDMTQYMSIGGNESCIGWLKQMQQGAIDDK*
Ga0076924_10946051	3300005747	Marine	LTGRSKSFTGETLQDCAKQFFDEFGEASKEVVKCQTFEVNNPTEFLIVGGNESCLGYLKQMQQGVIDDK*
Ga0076924_13065951	3300005747	Marine	LTGRSKSFTGETLQDCAKQFFDEYGEAIKEVVKCHTFETTDPTQFMSIGGNESCVGWLKQMQQGVIDDK*
Ga0075441_103338972	3300006164	Marine	MIQLEITLTGRSKSFTGDTLQDCAKQFFDEYGEADKEVVKCQTFEVNNPTEFLIVGGNESCIGWLKQMQQGAIDDK*
Ga0075447_100507013	3300006191	Marine	MVQLEITLTGRSKSFTSDTLQDCAKQFFDEFGEASKEVVKCQTFEVNNPTEFLIVGGNESCIGYLKQMQQGAIDDK*
Ga0075444_102472202	3300006947	Marine	MVQLEITLTGRSKSFTADTLQDCAKQFFDEFGEASKEVVKCQTFEVNNPTEFLIVGGNESCLGYLKQMQQGAINDK*
Ga0075444_103456152	3300006947	Marine	MVQLEVTLTGRSKSFTGDTLQDCAKQFFDEYGEASKEVVKCYTFETNDPTQFMSIGGNESCVAWLKQMQQGAIDDK*
Ga0114916_11528752	3300008221	Deep Ocean	MVQLEITLTGRSKSFTSDTLQDCAKQFFDEFGEASKEVVKCHTFEVNDPTQFMSIGGNESCIGWLKQMQQGAIDDK*
Ga0102957_13466032	3300009027	Pond Water	MVQLEITLTGRSKSFTGDTLQDCAKQFFDEYGEASKEVVKCQTFEVNNPTEFLIVGGNESCLGYLKQMQQGVIDDK*
Ga0115566_100264602	3300009071	Pelagic Marine	MVQLEITLTGRSKSFTRDTLQDCAKQFFDEYGEAIKEVVKCHTFETNDPTQFMSIGGNESCVAWLKQMQQGAIDDK*
Ga0102814_107043591	3300009079	Estuarine	MVQLEVTLTGRSKSFTADTLQDCAKQFFDEFGEASKEVVKCQTFEVNNPTEFLIVGGNESCIGYLKQMQQGAINDK*
Ga0114995_100897541	3300009172	Marine	MVQLEVTLTGRSKSFTEKTLQECIAKFFDEYGEAIKEVVECRTFETENPKQYMSVGGNESCVAWLKQMQQGAIDDR*
Ga0114995_101279653	3300009172	Marine	MVQLEVTLTGRSKSFTADTLQDCAKQFFDEFGEASKEVVKCQTFEVNNPAEFLIVGGNESCLGYLKQMQQGAIDDK*
Ga0115551_14526291	3300009193	Pelagic Marine	SKSFTRDTLQDCAKQFFDEYGEAIKEVVKCHTFETNDPTQFMSIGGNESCVAWLKQMQQGAIDDK*
Ga0114994_104031581	3300009420	Marine	MVQLEVTLTGRSKSFTADTLQDCAKQFFDEFGEASKEVVKCQTFEVNNPAEFLIVGGNESCIGYLKQMQQGAINDK*
Ga0114994_104524253	3300009420	Marine	MVQLEITLTGRSKSFTAETLQECVVKFFNEYGEATKEVVKCHTFETQDPEQYMSIGGNESCIGWLKQMQQGAIDDK*
Ga0114994_106145573	3300009420	Marine	MVQLEVTLTGRSKSFTAETLQDCAKQFFDEYGEASKEVVKCQTFEVNNPTEFLIVGGNESCLGYLKQMQQGVIDVK*
Ga0114997_102928002	3300009425	Marine	MVQLEITLTGRSKSFTAETLQECVVKFFNEYGEATKEVVKCHTFETQDSEQYMSIGGNESCIGWLKQMQQGAIDDK*
Ga0114915_10715422	3300009428	Deep Ocean	MVQLEITLTGRSKSFTGDTLQDCAKQFFDEFGEASKEVVKCHTFEVNNPTEFLIVGGNESCIGYLKQMQQGAIDDK*
Ga0114915_10921074	3300009428	Deep Ocean	VQLEITLTGRSKSFTADTLQDCAKQFFDEFGEASKEVVKCQTFEVNNPTEFLIVGGNESCLGYLKQMQQGAINDK*
Ga0114915_11040581	3300009428	Deep Ocean	MVQLEVTLTGRSKSFTGDTLQDCAKQFFDEYGEASKEVVKCYTFETNNPTEYLITGGNESCIGYLKQAQQGIQGDINDK*
Ga0115556_12218302	3300009437	Pelagic Marine	MVQLEITLTGRSKSFTGETLQDCAKQFFDEYGEASKEVVKCQTFEVNNPTEFLIVGGNESCLGYLKQMQQGAIDDK*
Ga0115561_13809382	3300009440	Pelagic Marine	MVQLEITLTGRSKSFTGETLQDCAKQFFDEYGEASKEVVKCQTSEVNNPTEFLIVGGNESCLGYLKQMQQGVIDDK*
Ga0115557_10369482	3300009443	Pelagic Marine	MVQLEITLTGRSKSFIGETLQDCAKQFFDEYGEASKEVVKCQTFEVNNPTEFLIVGGNESCLGYLKQMQQGVIDDK*
Ga0115572_103508513	3300009507	Pelagic Marine	MVQLEITLTGRSKSFIGETLQDCAKQFFDEFGEASKEVVKCQTFEVNNPTEFLIVGGNESCLGYLKQMQQGVIDDK*
Ga0115004_106060071	3300009526	Marine	MVQLEVTLTGRSKSFTADTLQDCAKQFFDEYGEASKEVVKCQTFEVNNPTEFLIVGGNESCIGYLKQMQQGAIDVK*
Ga0115004_106764123	3300009526	Marine	QLEVTLTGRSKSFTADTLQDCAKQFFDEFEEASKEVVKCQTFEVNNPAEFLIVGGNESCIGYLKQMQQGAIDDK*
Ga0114914_10072682	3300009601	Deep Ocean	MVQLEVTLTGRSKSFTSDTLQDCAKQFFDEFGEASKEVVKCHTFEVNDPTQFMSIGGNESCIGWLKQMQQGAIDDK*
Ga0115001_109777421	3300009785	Marine	MVQLEVTLTGRSKSFTADTLQDCAKQFFDEFGEASKEVVKCQTFEVNNPAEFLIVGGNESCIGYLKQMQQGA
Ga0181377_100278812	3300017706	Marine	MVQLEITLTNRSKTFTGDTLQDCAKQFFDEYGEASKEIVKCQTFEVNNPAEFLIVGGNESCIGYLKQMQQGAINDK
Ga0181416_10394721	3300017731	Seawater	FTGETLQDCAKQFFDEYGEAIKEVVKCHTFETTDPTQFMSIGGNESCVGWLKQMQQGVIDDK
Ga0181433_10093395	3300017739	Seawater	MVQLEVTLTGRSKSFTGETLQDCAKQFFDEYGEAIKEVVKCHTFETTDPTQFMSIGGNESCVGWLKQMQQGVVDDK
Ga0181414_11726613	3300017759	Seawater	MVQLEVTLTGRSKSFTGDTLQDCAKQFFDEYGEAIKEVVKCHTFETTDPAQFMSIGGNESCVGWLKQMQQGVIDDK
Ga0206131_1000056215	3300020185	Seawater	MVQLEITLTGRSKSFTGETLQDCAKQFFDEFGEASKEVVKCQTFEVNNPTEFLIVGGNESCLGYLKQMQQGVIDDK
Ga0211682_103023643	3300020376	Marine	KEKIMVQLEVTLTGRSKSFTGDTLQDCAKQFFDEFGEASKEVVKCQTFEVNNPTEFLIVGGNESCIGYLKQMQQGAIDDK
Ga0211687_102600331	3300020396	Marine	NNMVQLEVTLTGRSKSFTKDTLQDCAKQFFDEFGEASKEVVKCQTFEVNNPAEFLIVGGNESCIGYLKQMQQGAIDDK
Ga0211577_100924397	3300020469	Marine	MVQLEVTLTGRSKSFTGETLQDCAKQFFDEYGEAIKEVVKCHTFETTDPAQFMSIGGNESCVGWLKQMQQGVIDDK
Ga0207905_10107225	3300025048	Marine	MVQLEITLTGRSKTFTAETLQDCAKQFFDEYGEASKEVVKCQTFEVNNPTEFLIVGGNESCIGYLKQMQQGAINDK
Ga0207890_10668051	3300025079	Marine	SKSFTADTLQDCAKQFFDEYGEASKEVVKCHTFETNDPTQFMSIGGNESCIGWLNQIKQGVIDDK
Ga0209535_10122492	3300025120	Marine	MVQLEVTLTGRSKSFTADTLQDCAKQFFDEYGEASEEVVKCQTFEVNNPAEFLIVGGNESCIGYLKQMQQGAINDK
Ga0209535_10332893	3300025120	Marine	MVQLEVTLTGRSKSFTGETLQDCAKQFFDEYGEASKEVVKCHTFEITDPTQFMSIGGNESCIGWLKQMQQGVIDDK
Ga0209535_11023951	3300025120	Marine	TLTGRSKSFTADTLQDCAKQFFDEFGEASKEVVKCQTFEVNNPTEFLIVGGNESCIGYLKQMQQGAINDK
Ga0209535_11207842	3300025120	Marine	MVQLEVTLTGRSKSFTGDTLQDCAKQFFNDYGEASKEVVKCYTFESSDPKQYMSIGGNESCLVWLKQMQQGVIDDK
Ga0209535_11596231	3300025120	Marine	MVQLEVTLTGRSKSFTADTLQDCAKQFFDEYGEASKEVVKCHTFETNDPTQFMSIGGNESCIGWLNQIKQGVIDDK
Ga0209535_12140051	3300025120	Marine	MVQLEITLTGRSKTFTAETLQDCAKQFFDEFGEASKEVVKCQTFEVNNPTEFLIVGGNESCIGYLKQMQQGAIDDK
Ga0209336_100967733	3300025137	Marine	MVQLEVTLTGRSKTFTGDTLQDCAKQFFDEYGEASKEIVKCQTFEVNNPAEFLIVGGNESCIGYLKQMQQGAIDDK
Ga0209336_100983211	3300025137	Marine	QLEVTLTGRSKSFTGETLQDCAKQFFDEFGEASKEVVKCHTFETNDPTQFMSIGGNESCIGWLNQIKQGVIDDK
Ga0209336_101243433	3300025137	Marine	MVQLEITLTGRSKSFTADTLQDCAKQFFDEFGEASKEVVKCHTFETNDPTQFMSIGGNESCIGWLKQMQQGVIDDK
Ga0209336_101923772	3300025137	Marine	MVQLEVTLTGRSKSFTGKTLQDCAKQFFNEYGEASKEVIKCHTFQTTDPTQFMSIGGNESCLAWLKQMQQGVIDDK
Ga0209634_10356493	3300025138	Marine	MVQLEVTLTGRSKTFTADTLQDCAKQFFDEYGEASKEVVKCHTFETNDPTQFMSIGGNESCLAWLKQMQQGTIDDK
Ga0209634_10878655	3300025138	Marine	KEIRMVQLEVTLTGRSKSFTADTLQDCAKQFFDEYGEASKEVVKCQTFEVNNPTEFLIVGGNESCLGYLKQMQQGAIDDK
Ga0209634_10943421	3300025138	Marine	KEIRMVQLEVTLTGRSKSFTADTLQDCAKQFFDEYGEASKEVVKCHTFETNDPTQFMSIGGNESCIGWLNQIKQGVIDDK
Ga0209634_11610284	3300025138	Marine	KEIRMVQLEVTLTGRSKSFTADTLQDCAKQFFDEYGEASKEVVKCQTFEVNNPTEFLIVGGNESCLGYLKQMQQGKIDDK
Ga0209337_11335963	3300025168	Marine	MVQLEVTLTGRSKSFTADTLQDCAKQFFDEFGEASKEVVKCQTFEVNNPTEFLIVGGNESCIGYLKQMQQGAINDK
Ga0209337_11549882	3300025168	Marine	MVQLEITLTGRSKTFTAETLQDCAKQFFDEYGEASKEVVKCQTFEVNNPTEFLIVGGNESCLGYLKQMQQGAIDDK
Ga0208031_10226322	3300025237	Deep Ocean	MVQLEVTLTGRSKSFTSDTLQDCAKQFFDEFGEASKEVVKCHTFEVNDPTQFMSIGGNESCIGWLKQMQQGAIDDK
Ga0208031_10339533	3300025237	Deep Ocean	MVQLEITLTGRSKSFTGDTLQDCAKQFFDEFGEASKEVVKCQTFEVNNPTEFLIVGGNESCIGYLKQMQQGAIDDK
Ga0208032_10206403	3300025266	Deep Ocean	MVQLEITLTGRSKSFTADTLQDCAKQFFDEFGEASKEVVKCQTFEVNNPTEFLIVGGNESCLGYLKQMQQGAINDK
Ga0208814_10228543	3300025276	Deep Ocean	MVQLEITLTGRSKSFTSDTLQDCAKQFFDEFGEASKEVVKCHTFEVNDPTQFMSIGGNESCIGWLKQMQQGAIDDK
Ga0208814_10901082	3300025276	Deep Ocean	MVQLEVTLTGRSKSFTGDTLQDCAKQFFDEFGEASKEVVKCQTFEVNNPTEFLIVGGNESCIGYLKQMQQGAIDDK
Ga0208148_10195436	3300025508	Aqueous	MVQLEVTLTGRSKSFTGETLQDCAKQFFDEYGEAIKEVVKCHTFETTDPTQFMSIGGNESCVGWLKQMQQGVIDDK
Ga0209716_10201194	3300025626	Pelagic Marine	MVQLEITLTGRSKSFTGDTLQDCAKQFFDEYGEASKEVVKCHTFETNDPTQFMSIGGNESCVAWLKQMQQGAIDDK
Ga0208134_10666822	3300025652	Aqueous	MVQLEVTLTGRSKSFTADTLQNCAKQFFDEYGEASKEVVKCHTFETNDPTQFMSIGGNESCVAWLKQMQQGEINDK
Ga0209600_11849201	3300025821	Pelagic Marine	TGRSKSFIGETLQDCAKQFFDEYGEASKEVVKCQTFEVNNPTEFLIVGGNESCLGYLKQMQQGVIDDK
Ga0209308_101563643	3300025869	Pelagic Marine	MVQLEITLTGRSKSFTRDTLQDCAKQFFDEYGEAIKEVVKCHTFETNDPTQFMSIGGNESCVAWLKQMQQGAIDDK
Ga0209223_101480004	3300025876	Pelagic Marine	MVQLEITLTGRSKSFIGETLQDCAKQFFDEYGEASKEVVKCQTFEVNNPTEFLIVGGNESCLGYLKQMQQGVIDDK
Ga0209384_10233491	3300027522	Marine	MVQLEITLTGRSKSFTSDTLQDCAKQFFDEFGEASKEVVKCQTFEVNNPTEFLIVGGNESCIG
Ga0209384_10342694	3300027522	Marine	MIQLEITLTGRSKSFTADTLQDCAKQFFDEFGEASKEVVKCQTFEVNNPTEFLIVGGNESCIGWLKQMQQGAIDDK
Ga0209482_10252722	3300027668	Marine	MVQLEITLTGRSKSFTSDTLQDCAKQFFDEFGEASKEVVKCQTFEVNNPTEFLIVGGNESCIGYLKQMQQGAIDDK
Ga0209383_10349854	3300027672	Marine	MIQLEITLTGRSKSFTADTLQDCAKQFFDEFGEASKEVVKCQTFEVNNPTEFLIVGGNESCIGYLKQMQQGAIDDK
Ga0209710_10225468	3300027687	Marine	MVQLEVTLTGRSKSFTADTLQDCAKQFFDEFGEASKEVVKCQTFEVNNPAEFLIVGGNESCLGYLKQMQQGAIDDK
Ga0209192_101174213	3300027752	Marine	MVQLEVTLTGRSKSFTADTLQDCAKQFFDEFEEASKEVVKCQTFEVNNPAEFLIVGGNESCIGYLKQMQQGAIDDK
Ga0209502_103197852	3300027780	Marine	MVQLEITLTGRSKSFTAETLQECVVKFFNEYGEATKEVVKCHTFETQDPEQYMSIGGNESCIGWLKQMQQGAIDDK
Ga0209711_102468563	3300027788	Marine	LTGRSKSFTADTLQDCAKQFFDEFGEASKEVVKCQTFEVNNPTEFLIVGGNESCLGYLKQMQQGVINDK
Ga0209090_103291882	3300027813	Marine	MVQLEVTLTGRSKSFTADTLQDCAKQFFDEFGEASKEVVKCQTFEVNNPAEFLIVGGNESCLGYLKQMQQGVIDVK
Ga0256368_10222044	3300028125	Sea-Ice Brine	MVQLEVTLTGRSKSFTAETLQDCAKQFFDEYGEASKEVVKCQTFEVNNPTEFLIVGGNESCIGYLKQMQQGAIDVK
Ga0256368_10270624	3300028125	Sea-Ice Brine	TFTAETLQDCAKQFFDEYGEASKEVVKCQTFEVNNPTEFLIVGGNESCIGYLKQMQQGAINDK
Ga0308010_10252038	3300031510	Marine	MIQLEITLTGRSKSFTGDTLQDCAKQFFDEFGEASKEVVKCQTFEVNNPTEFLIVGGNESCIGWLKQMQQGAIDDK
Ga0307488_102234904	3300031519	Sackhole Brine	MVQLEVTLTGRSKSFTADTLQDCAKQFFDEFGEASKEVVKCQTFEVNNPTEFLIVGGNESCLGYLKQMQQGAINDK
Ga0307488_107278062	3300031519	Sackhole Brine	QLEITLTGRSKSFTAETLQECVVKFFNEYGEATKEVVKCHTFETQDPEQYMSIGGNESCIGWLKQMQQGAIDDK
Ga0308014_10521573	3300031628	Marine	MVQLEITLTGRSKSFTGDTLQDCAKQFFDEYGEASKEVVKCQTFEVNNPTEFLIVGGNESCIGYLKQMQQGAIDDK
Ga0308004_103341741	3300031630	Marine	MVQLEVTLTGRSKSFTSDTLQDCAKQFFDEFGEASKEVVKCQTFEVNNPTEFLIVGGNESCIGWLKQMQQGAIDDK
Ga0308012_102904782	3300031647	Marine	MVQLEVTLTGRSKSFTSDTLQDCAKQFFDEFGEASKEVVKCHTFEVNDPTQFMSIGGNESCMGWLKQMQQGAIDDK
Ga0307984_12091291	3300031658	Marine	IMVQLEITLTGRSKSFTGDTLQDCAKQFFDEYGEADKEVVKCQTFEVNNPTEFLIVGGNESCIGWLKQMQQGAIDDK
Ga0308011_101297721	3300031688	Marine	KKETIMVQLEITLTGRSKSFTGDTLQDCAKQFFDEYGEASKEVVKCQTFEVNNPTEFLIVGGNESCIGWLKQMQQGAIDDK
Ga0308017_10566562	3300031689	Marine	MVQLEVTLTGRSKSFTADTLQDCAKQFFDEFGEASKEVVKCQTFEVNNPTEFLIVGGNESCIGYLKQMQQGAIDDK
Ga0308002_10915872	3300031703	Marine	MVQLEITLTGRSKSFTADTLQDCAKQFFDEFGEASKEVVKCQTFEVNNPTEFLIVGGNESCIGWLKQMQQGAIDDK
Ga0314858_059802_539_769	3300033742	Sea-Ice Brine	MVQLEVTLTGRSKSFTAETLQDCAKQFFDEYGEASKEVVKCQTFEVNNPTEFLIVGGNESCIGYLKQMQQGAIDDK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F092711

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences