Metagenome Family F092708

Overview

Basic Information

• Family ID: F092708
• Family Type: Metagenome
• Number of Sequences: 107
• Average Sequence Length: 54 residues
• Representative Sequence: MINYNLILYIGIAFYVAIFFTFIAYQMHDRKKDREQWLSDQLTKSFNKAKNDNR
• Number of Associated Samples: 70
• Number of Associated Scaffolds: 107

Quality Assessment

• Transcriptomic Evidence: No
• Most common taxonomic group: Unclassified
• % of genes with valid RBS motifs: 48.60 %
• % of genes near scaffold ends (potentially truncated): 12.15 %
• % of genes from short scaffolds (< 2000 bps): 91.59 %
• Associated GOLD sequencing projects: 57
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.46

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Unclassified (88.785 % of family members)
• NCBI Taxonomy ID: N/A
• Taxonomy: N/A

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (51.402 % of family members)
• Environment Ontology (ENVO): Unclassified (92.523 % of family members)
• Earth Microbiome Project Ontology (EMPO): Free-living → Saline → Water (saline) (80.374 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Transmembrane (alpha-helical)
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 59.76%
  β-sheet: 0.00%
  Coil/Unstructured: 40.24%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF03237	Terminase_6N	2.80
PF13759	2OG-FeII_Oxy_5	1.87

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	88.79 %
All Organisms	root	All Organisms	11.21 %

Level 2

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	88.79 %
Viruses	superkingdom	All Organisms → Viruses	7.48 %
cellular organisms	root	All Organisms → cellular organisms	3.74 %

Level 3

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	88.79 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	3.74 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	3.74 %
environmental samples	no rank	All Organisms → Viruses → environmental samples	1.87 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.87 %

Level 4

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	88.79 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	3.74 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	1.87 %
uncultured virus	species	All Organisms → Viruses → environmental samples → uncultured virus	1.87 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.87 %

Level 5

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	88.79 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	3.74 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	1.87 %
uncultured virus	species	All Organisms → Viruses → environmental samples → uncultured virus	1.87 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.87 %

Level 6

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	88.79 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	3.74 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1.87 %
uncultured virus	species	All Organisms → Viruses → environmental samples → uncultured virus	1.87 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.87 %

Level 7

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	88.79 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	1.87 %
uncultured virus	species	All Organisms → Viruses → environmental samples → uncultured virus	1.87 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.87 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	0.93 %

Level 8

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	88.79 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	1.87 %
uncultured virus	species	All Organisms → Viruses → environmental samples → uncultured virus	1.87 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.87 %
uncultured Mediterranean phage uvDeep-CGR2-KM24-C165	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Mediterranean phage uvDeep-CGR2-KM24-C165	0.93 %

Level 9

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	88.79 %
Flavobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	1.87 %
uncultured virus	species	All Organisms → Viruses → environmental samples → uncultured virus	1.87 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.87 %
uncultured Mediterranean phage uvDeep-CGR2-KM24-C165	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Mediterranean phage uvDeep-CGR2-KM24-C165	0.93 %

Level 10

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	88.79 %
unclassified Flavobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae	1.87 %
uncultured virus	species	All Organisms → Viruses → environmental samples → uncultured virus	1.87 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.87 %
uncultured Mediterranean phage uvDeep-CGR2-KM24-C165	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Mediterranean phage uvDeep-CGR2-KM24-C165	0.93 %

Level 11

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	88.79 %
Flavobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	1.87 %
uncultured virus	species	All Organisms → Viruses → environmental samples → uncultured virus	1.87 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.87 %
uncultured Mediterranean phage uvDeep-CGR2-KM24-C165	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Mediterranean phage uvDeep-CGR2-KM24-C165	0.93 %

Associated Scaffolds

Scaffold	Taxonomy	Length
3300001450|JGI24006J15134_10007430	Not Available	5546
3300001450|JGI24006J15134_10049887	Not Available	1717
3300001450|JGI24006J15134_10060342	All Organisms → Viruses → Predicted Viral	1502
3300001450|JGI24006J15134_10075003	Not Available	1284
3300001450|JGI24006J15134_10161486	Not Available	722
3300001450|JGI24006J15134_10181055	Not Available	661
3300001450|JGI24006J15134_10196653	Not Available	618
3300001450|JGI24006J15134_10197199	Not Available	617
3300001743|JGI24515J20084_1022607	Not Available	563
3300002511|JGI25131J35506_1027164	Not Available	786
3300002760|JGI25136J39404_1084198	Not Available	596
3300004448|Ga0065861_1056831	All Organisms → Viruses → Predicted Viral	1424
3300004460|Ga0066222_1098902	Not Available	1798
3300006164|Ga0075441_10369102	Not Available	520
3300006340|Ga0068503_10436378	Not Available	641
3300006340|Ga0068503_10460168	Not Available	2018
3300006340|Ga0068503_10588535	Not Available	580
3300006752|Ga0098048_1201216	Not Available	587
3300006810|Ga0070754_10430703	Not Available	574
3300006928|Ga0098041_1021890	Not Available	2088
3300006929|Ga0098036_1140962	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	737
3300006929|Ga0098036_1215239	Not Available	583
3300006929|Ga0098036_1271615	Not Available	511
3300008216|Ga0114898_1152474	Not Available	665
3300008216|Ga0114898_1157879	Not Available	651
3300008219|Ga0114905_1282253	Not Available	513
3300008220|Ga0114910_1148885	Not Available	667
3300009173|Ga0114996_10158337	Not Available	1859
3300009173|Ga0114996_10457943	Not Available	968
3300009173|Ga0114996_10707652	Not Available	737
3300009409|Ga0114993_10537198	Not Available	865
3300009425|Ga0114997_10281775	Not Available	926
3300009425|Ga0114997_10373602	Not Available	775
3300009425|Ga0114997_10387852	Not Available	757
3300009604|Ga0114901_1144650	Not Available	717
3300009605|Ga0114906_1114244	Not Available	960
3300009620|Ga0114912_1107212	Not Available	667
3300009622|Ga0105173_1014812	Not Available	1132
3300009622|Ga0105173_1107035	Not Available	518
3300009786|Ga0114999_11231707	Not Available	532
3300009786|Ga0114999_11319921	Not Available	510
3300010883|Ga0133547_10494591	Not Available	2473
3300011013|Ga0114934_10166389	Not Available	1035
3300011013|Ga0114934_10254463	Not Available	800
3300017728|Ga0181419_1131871	Not Available	605
3300017738|Ga0181428_1139872	Not Available	566
3300017741|Ga0181421_1063058	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	977
3300017751|Ga0187219_1059450	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1241
3300017756|Ga0181382_1136436	Not Available	647
3300017757|Ga0181420_1104407	Not Available	870
3300017758|Ga0181409_1197267	Not Available	581
3300017762|Ga0181422_1259958	Not Available	512
3300017763|Ga0181410_1169541	Not Available	607
3300017765|Ga0181413_1172982	Not Available	648
3300017769|Ga0187221_1166043	Not Available	649
3300017771|Ga0181425_1212001	Not Available	605
3300017772|Ga0181430_1068202	Not Available	1084
3300017772|Ga0181430_1076397	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Mediterranean phage uvDeep-CGR2-KM24-C165	1014
3300021791|Ga0226832_10206698	Not Available	769
(restricted) 3300024052|Ga0255050_10016693	Not Available	1381
(restricted) 3300024517|Ga0255049_10541115	Not Available	541
(restricted) 3300024518|Ga0255048_10077065	Not Available	1656
3300025045|Ga0207901_1017360	Not Available	991
3300025045|Ga0207901_1038470	Not Available	643
3300025045|Ga0207901_1040143	Not Available	628
3300025071|Ga0207896_1003363	Not Available	3006
3300025071|Ga0207896_1020828	Not Available	1137
3300025110|Ga0208158_1018183	Not Available	1859
3300025125|Ga0209644_1013742	Not Available	1714
3300025125|Ga0209644_1068177	Not Available	827
3300025125|Ga0209644_1115300	Not Available	638
3300025128|Ga0208919_1009436	Not Available	4062
3300025138|Ga0209634_1180020	Not Available	830
3300025168|Ga0209337_1175808	Not Available	898
3300025168|Ga0209337_1215925	Not Available	765
3300025168|Ga0209337_1337815	Not Available	523
3300025236|Ga0207884_1008496	All Organisms → cellular organisms → Bacteria	2082
3300025236|Ga0207884_1024979	Not Available	1064
3300025251|Ga0208182_1018069	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	1791
3300025300|Ga0208181_1106508	Not Available	534
3300025305|Ga0208684_1023729	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	1894
3300025873|Ga0209757_10075861	Not Available	1011
3300025873|Ga0209757_10077679	All Organisms → Viruses → environmental samples → uncultured virus	999
3300025873|Ga0209757_10203746	Not Available	627
3300025873|Ga0209757_10312082	Not Available	501
3300027714|Ga0209815_1203526	Not Available	610
3300027779|Ga0209709_10072506	Not Available	1894
3300027813|Ga0209090_10396157	Not Available	664
3300027838|Ga0209089_10264762	Not Available	991
3300027838|Ga0209089_10325052	Not Available	870
3300027844|Ga0209501_10485229	Not Available	712
3300027847|Ga0209402_10432801	Not Available	784
3300031605|Ga0302132_10074730	Not Available	1734
3300031605|Ga0302132_10276287	Not Available	786
3300031606|Ga0302119_10021372	Not Available	2754
3300031606|Ga0302119_10122373	Not Available	1047
3300031701|Ga0302120_10230507	Not Available	697
3300031773|Ga0315332_10584042	Not Available	697
3300031801|Ga0310121_10025827	All Organisms → cellular organisms → Bacteria	4194
3300032011|Ga0315316_11599764	Not Available	509
3300033742|Ga0314858_023053	Not Available	1386
3300033742|Ga0314858_092787	Not Available	763
3300034628|Ga0326755_020303	Not Available	652
3300034629|Ga0326756_003340	Not Available	1985
3300034654|Ga0326741_026937	Not Available	1008
3300034654|Ga0326741_032025	All Organisms → Viruses → environmental samples → uncultured virus	913
3300034654|Ga0326741_083939	Not Available	523

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Class

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Category

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Type

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	68.22%
Strait	Environmental → Aquatic → Marine → Strait	13.08%
Unclassified	Environmental → Aquatic → Marine → Unclassified	6.54%
Coastal	Environmental → Aquatic → Marine → Coastal	4.67%
Inlet	Environmental → Aquatic → Marine → Inlet	2.80%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	1.87%
Volcanic	Environmental → Aquatic → Marine → Volcanic	1.87%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	0.93%

Subtype

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	65.42%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	13.08%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	6.54%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	4.67%
Aphotic Zone	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone	2.80%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	2.80%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	1.87%
Unclassified	Environmental → Aquatic → Marine → Volcanic → Unclassified	1.87%
Diffuse Flow	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow	0.93%

Habitat

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	51.40%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	13.08%
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	11.21%
Filtered Seawater	Environmental → Aquatic → Marine → Unclassified → Unclassified → Filtered Seawater	4.67%
Marine	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone → Marine	2.80%
Seawater	Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater	2.80%
Marine Oceanic	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine Oceanic	1.87%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	1.87%
Sea-Ice Brine	Environmental → Aquatic → Marine → Coastal → Unclassified → Sea-Ice Brine	1.87%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	1.87%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	1.87%
Deep Subsurface	Environmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface	1.87%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	0.93%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	0.93%
Hydrothermal Vent Fluids	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Hydrothermal Vent Fluids	0.93%

Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OID	Sample Name	Habitat Type
3300001450	Marine viral communities from the Pacific Ocean - LP-53	Environmental
3300001743	Marine viral communities from the Pacific Ocean - LP-38	Environmental
3300002511	Marine viral communities from the Pacific Ocean - ETNP_2_1000	Environmental
3300002760	Marine viral communities from the Pacific Ocean - ETNP_6_1000	Environmental
3300004448	Marine viral communities from Newfoundland, Canada BC-1	Environmental
3300004460	Marine viral communities from Newfoundland, Canada BC-1	Environmental
3300006164	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG002-DNA	Environmental
3300006340	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_2_0770m	Environmental
3300006752	Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaG	Environmental
3300006810	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01	Environmental
3300006928	Marine viral communities from the Subarctic Pacific Ocean - 8_ETSP_OMZ_AT15162 metaG	Environmental
3300006929	Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG	Environmental
3300008216	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_Geostar	Environmental
3300008219	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_b05	Environmental
3300008220	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_908	Environmental
3300009173	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_134	Environmental
3300009409	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_150	Environmental
3300009425	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_136	Environmental
3300009604	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s16	Environmental
3300009605	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_M9	Environmental
3300009620	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_51	Environmental
3300009622	Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3321_4155	Environmental
3300009786	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_126	Environmental
3300010883	western Arctic Ocean co-assembly	Environmental
3300011013	Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 4SBTROV10_white metaG	Environmental
3300017728	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 42 SPOT_SRF_2013-04-24	Environmental
3300017738	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 51 SPOT_SRF_2014-02-12	Environmental
3300017741	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 44 SPOT_SRF_2013-06-19	Environmental
3300017751	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 13 SPOT_SRF_2010-07-21 (version 2)	Environmental
3300017756	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 5 SPOT_SRF_2009-10-22	Environmental
3300017757	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 43 SPOT_SRF_2013-05-22	Environmental
3300017758	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 32 SPOT_SRF_2012-05-30	Environmental
3300017762	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 45 SPOT_SRF_2013-07-18	Environmental
3300017763	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 33 SPOT_SRF_2012-06-20	Environmental
3300017765	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 36 SPOT_SRF_2012-09-28	Environmental
3300017769	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 5 SPOT_SRF_2009-10-22 (version 2)	Environmental
3300017771	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 48 SPOT_SRF_2013-11-13	Environmental
3300017772	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 53 SPOT_SRF_2014-04-10	Environmental
3300021791	Hydrothermal fluids microbial communities from Mariana Back-Arc Basin vent fields, Pacific Ocean - Daikoku_FS921 150_kmer	Environmental
3300024052 (restricted)	Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_5	Environmental
3300024517 (restricted)	Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_3	Environmental
3300024518 (restricted)	Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_2	Environmental
3300025045	Marine viral communities from the Pacific Ocean - LP-46 (SPAdes)	Environmental
3300025071	Marine viral communities from the Pacific Ocean - LP-36 (SPAdes)	Environmental
3300025110	Marine viral communities from the Subarctic Pacific Ocean - 8_ETSP_OMZ_AT15162 metaG (SPAdes)	Environmental
3300025125	Marine viral communities from the Pacific Ocean - ETNP_2_1000 (SPAdes)	Environmental
3300025128	Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (SPAdes)	Environmental
3300025138	Marine viral communities from the Pacific Ocean - LP-40 (SPAdes)	Environmental
3300025168	Marine viral communities from the Pacific Ocean - LP-53 (SPAdes)	Environmental
3300025236	Marine viral communities from the Deep Pacific Ocean - MSP-144 (SPAdes)	Environmental
3300025251	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_906 (SPAdes)	Environmental
3300025300	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s6 (SPAdes)	Environmental
3300025305	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_b05 (SPAdes)	Environmental
3300025873	Marine viral communities from the Pacific Ocean - ETNP_6_1000 (SPAdes)	Environmental
3300027714	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG002-DNA (SPAdes)	Environmental
3300027779	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_136 (SPAdes)	Environmental
3300027813	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_152 (SPAdes)	Environmental
3300027838	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_150 (SPAdes)	Environmental
3300027844	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_134 (SPAdes)	Environmental
3300027847	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_126 (SPAdes)	Environmental
3300031605	Marine microbial communities from Western Arctic Ocean, Canada - CB9_32.1	Environmental
3300031606	Marine microbial communities from Western Arctic Ocean, Canada - AG5_Tmax	Environmental
3300031701	Marine microbial communities from Western Arctic Ocean, Canada - AG5_Bottom	Environmental
3300031773	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 100m 34915	Environmental
3300031801	Marine microbial communities from Western Arctic Ocean, Canada - CB27_Tmax_986	Environmental
3300032011	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 60m 3416	Environmental
3300033742	Sea-ice brine viral communities from Beaufort Sea near Barrow, Alaska, United States - 2018 seawater	Environmental
3300034628	Seawater viral communities from Mid-Atlantic Ridge, Atlantic Ocean - 543_2961	Environmental
3300034629	Seawater viral communities from Mid-Atlantic Ridge, Atlantic Ocean - 543_2600	Environmental
3300034654	Seawater viral communities from Mid-Atlantic Ridge, Atlantic Ocean - 487_2244	Environmental

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI24006J15134_100074303	3300001450	Marine	MINYNVVLYVMLFVYVAIIIAFVLYQMNDRKKDREQWLSDQLSKSFEKGKNYERDQIRK*
JGI24006J15134_100498877	3300001450	Marine	MNYNIILYVGIAFYVAIFIAFIMYQMHDREEDRKQWLSDQLTPSFNKEKGKK*
JGI24006J15134_100603422	3300001450	Marine	MINYNLVMYIGLAFYVAIFFTFIAYQMHERKLDREQWLSNQLTKSFNKAKNDSR*
JGI24006J15134_100750031	3300001450	Marine	MIDYNLILYIGLAFYVAIFFTFIVYQMHDRKKDREQWLSDQLSISFEKGKKEDAKNQL*
JGI24006J15134_101614862	3300001450	Marine	RMINYNLILYVGIAFYVAIFFTFIAYQMHDRKKDREQWLSDQLTKSFNKAKNVNR*
JGI24006J15134_101810552	3300001450	Marine	MNYNIILYVGIAFYIAIFITFIVYQMHDREEDRKQWLSDQLTPSFNKEKKKK*
JGI24006J15134_101966532	3300001450	Marine	MNYDIILYVGIAFYVAIFITFIVYQMHDREEDRKQWLSDQLTPSFNKEKKKK*
JGI24006J15134_101971992	3300001450	Marine	MINYNLVLWIGLAFYVAIFFTFIVYQMHDRKKDREQWLSDQLTKSFDKAKNDSR*
JGI24515J20084_10226071	3300001743	Marine	MINYNLVLYVGIAFYALIFITFIAYQMHDRKKDREQWLSDQLTESFNKAKEMENKWKQ*
JGI25131J35506_10271642	3300002511	Marine	MINYNLVLYIGLAFYALIFFTFIAYQMHDRKKDREQWLSDQLIEPFNKAKEMKKRANR*
JGI25136J39404_10841981	3300002760	Marine	MIDYNLVLYIGIAFYALIFFTFIAYQMHDRKLDKEQSLSDRLTPSFNKAKRDE*
Ga0065861_10568313	3300004448	Marine	MNYNIILYIGIAFYIAIFITFIMYQMHDREEDRKQWLSDQLTPSFNKEKEKK*
Ga0066222_10989025	3300004460	Marine	MNYNIILYVGIAFYVAIFITFIMYQMHDREEDRKQWLSDQLTKAFNKEKEKK*
Ga0075441_103691022	3300006164	Marine	MNYNIILYVGIAFYVAIFITFIVYQMHDREEDRKQWLSDQLTKAFNKAKEEEKK*
Ga0068503_104363782	3300006340	Marine	MINYNLVLYVGIAFYALIFVLFITNEMDKRKKDIEQWKLNQSFNKAKEMEKSANR*
Ga0068503_104601681	3300006340	Marine	MINYNLVLYVGIAFYALIFITFIVYQMHDRKLDKEQWLSDQLTESFNKAKKDE*
Ga0068503_105885352	3300006340	Marine	MIDYNLVLYIGIAFYALIFITFIVYQMHDRKLDKEQWKNDELTKSFNKAKNDSR*
Ga0098048_12012161	3300006752	Marine	MIDYNLVLWIGLAFYIALFFTFIVYQMHDRKKDREQWLSDELTKSFNKAKNDNR*
Ga0070754_104307032	3300006810	Aqueous	MINYNLVLWIGLAFCIAIFFTFIVYQMHERKKDREQWLSDQLTPSFNKGKNDSR*
Ga0098041_10218904	3300006928	Marine	MINYNLVLWIGLAFYVAIFFTFIVYQMHDRKKDREQWLSDELTKSFNKAKNDNR*
Ga0098036_11409621	3300006929	Marine	KMNYNIILCVGIAFYIAIFIAFIVYHMHDREEDRKQWLSDQLTPSFNKEKEKNKFK*
Ga0098036_12152392	3300006929	Marine	MNYDIILYVGIAFYIAIFITFIVYQMHDREEDRKQWLSDQLTPSFNKEKEKNKFK*RIN*
Ga0098036_12716151	3300006929	Marine	YNIILYVGIAFYVAIFITFIVYQMHDRKEDRKQWLSDQLTPSFNKEKGKK*
Ga0114898_11524742	3300008216	Deep Ocean	MNYNIILYVGIAFYIAIFITFIMYQMHDREEDRKQWLSDQLTPSFNKGKKEEKK*
Ga0114898_11578791	3300008216	Deep Ocean	MINYNLVLWIGLAFYVAIFFTFIVYQMHYRKKDREQWLSDQLTKSFNKGKNDNR*
Ga0114905_12822532	3300008219	Deep Ocean	MNYNIILYVGIAFYVAIFITFIMYQMHDREEDRKQWLSDQLTPSFNKEKGKK*
Ga0114910_11488852	3300008220	Deep Ocean	MNYNIILYVGIAFYIAIFITFIMYQMHDREEDRKQWLSDQLTKAFNKEKGKK*
Ga0114996_101583371	3300009173	Marine	MYIGLAFYVAIFFTFIVYQMHDRKLDREQWLSNQLTKSFNKAKNDSR*
Ga0114996_104579432	3300009173	Marine	MNYNLVLWIGLAFYIAIFFTFIVYQMHERKLDREQWLSDQLTPSFNKGKKR*
Ga0114996_107076521	3300009173	Marine	MINYNLVLWIGLAFYIAIFFTFIVYQMHDRKKDREQWLSDQLTPSFNKGKK*
Ga0114993_105371981	3300009409	Marine	MNYNLVLWIGLAFYIAIFFTFIVYQMHERKLDREQWLSDQLTPSFNKGKNDNR*
Ga0114997_102817751	3300009425	Marine	MINYNLILYVGIAFYIAIFFTFIVYQMHERKLDREQWLSDQLTPSFNKGKNDNR*
Ga0114997_103736022	3300009425	Marine	MINYNLVLWIGLAFYIAIFFTFIVYQMHERKKDREQWLSDQLTISFNKGKNVNR*
Ga0114997_103878521	3300009425	Marine	MYIGLAFYVAIFFTFIVYQMHERKLDREQWLSNQLTKSFNKAKNDSR*
Ga0114901_11446501	3300009604	Deep Ocean	KKGEKMNYNIILYVGIAFYVAIFITFIMYQMHDREEDRKQWLSDQLTKAFNKEKGKK*
Ga0114906_11142442	3300009605	Deep Ocean	MNYNIILYVGIAFYVAIFITFIMYQMHDREEDRKQWLSDQLTKAFNKEKGKK*
Ga0114912_11072121	3300009620	Deep Ocean	LDRLIIQITKKGEKMNYNIILYVGIAFYIAIFITFIMYQMHDREEDRKQWLSDQLTPSFNKEKGKK*
Ga0105173_10148123	3300009622	Marine Oceanic	MIDYNLVLWIGLAFYIAIFITFIMYQMHDRKLDREQWLSDQLTQSINKAKNDNR*
Ga0105173_11070351	3300009622	Marine Oceanic	MINYNLVLYIGIAFYALIFFTFIAYQMHDRKKDREQWRLTQSYNKAKNDNR*
Ga0114999_112317071	3300009786	Marine	MINYNLVLWIGLAFYVAIFFTFIVYQMHDRKKDREQWLSDQLTPSFNKGKNVDR*
Ga0114999_113199211	3300009786	Marine	MYIGLAFYVAIFFTFIAYQMHERKLDREQWLSNQLTKSFNKAKNDSR*
Ga0133547_104945912	3300010883	Marine	MEGKKQMINYNLILYIGLAFYVAIFFTFIVYQMHDRKKDRQQWLSNQLSISFEKGKKEDAKNQS*
Ga0114934_101663891	3300011013	Deep Subsurface	MNYNIILYVGIAFYVAIFITFIVYQMHDREEDRKQWLSDQLTKAFNKEKEKNNYPQDNL*
Ga0114934_102544632	3300011013	Deep Subsurface	MNYNIILYVGIAFYVGIFITFIMYQMHDREEDRKQWLSDQLTKAFNKEKGKK*
Ga0181419_11318712	3300017728	Seawater	MNYNIILYVGIAFYIAIFITFIVYQMHDREEDRKQWLSDQLTKAFNKEKGKK
Ga0181428_11398722	3300017738	Seawater	MNYNIILYVGIAFYIAIFITFIVYQMHDREEDRKQWLSDQLTPSFNKEKEKNKFKXRIN
Ga0181421_10630582	3300017741	Seawater	MNYDIILYVGIAFYIAIFITFIVYQMHDREEDRKQWLSDQLTPSFNKEKEKK
Ga0187219_10594505	3300017751	Seawater	NYNIILYVGIAFYVAIFIAFIMYQMHDREEDRKQWLSDQLTPSFNKEKEKNKFK
Ga0181382_11364362	3300017756	Seawater	MNYNIILYVGIAFYIAIFITFIVYQMHDREEDRKQWLSDQLTKAFNKEKEKNNYPQDNL
Ga0181420_11044071	3300017757	Seawater	MNYNIILYVGIAFYIAIFITFIMYQMHDREEDRKQWLSDQLTPSFNKEKGKK
Ga0181409_11972671	3300017758	Seawater	MNYNIILYVGIAFYVAIFITFIMYQMHDREEDRKQWLSDQLTKAFNKEKGKK
Ga0181422_12599582	3300017762	Seawater	ILYVGIAFYVAIFITFIMYQMHDREEDRKQWLSDQLTPSFNKEKEKNKFK
Ga0181410_11695412	3300017763	Seawater	MNYNIILYVGIAFYVAIFIAFIMYQMHDREEDRKQWLSDQLTKAFNKEKGKK
Ga0181413_11729821	3300017765	Seawater	MNYNIILCVGIAFYIAIFITFIVYQMHDREEDRKQWLSDQLTKAFNKEKGKK
Ga0187221_11660432	3300017769	Seawater	MNYNIILYVGIAFYIAIFITFIVYQMHDREEDRKQWLSDQLTPSFNKEKEKK
Ga0181425_12120011	3300017771	Seawater	MNYNIILYVGIAFYVAIFIAFIMYQMHDREEDRKQWLSDQLTKSFNKGKNDNR
Ga0181430_10682024	3300017772	Seawater	MNYNIILYVGIAFYVAIFIAFIMYQMHDREEDRKQWLSDQLTKAFNKEKEKNNYPQDNL
Ga0181430_10763972	3300017772	Seawater	MNYDIILYVGIAFYIAIFITFIVYQMHDREEDRKQWLSDQLTPSFNKEKEKNKFK
Ga0226832_102066983	3300021791	Hydrothermal Vent Fluids	MNYNIILYVGIAFYVAIFITFIMYQMHDREEDRKQWLSDQLTKAFNKEKEKNNYPQDNL
(restricted) Ga0255050_100166933	3300024052	Seawater	MNYNLVLWIGLAFYVAIFFTFIVYQMHDRKKDREQWLSDQLTPSFNKGKNDANN
(restricted) Ga0255049_105411153	3300024517	Seawater	MINYNLILYIGIAFYVAIFFTFIAYQMHDRKKDREQWLSDQLTKSFNKAKNDNR
(restricted) Ga0255048_100770655	3300024518	Seawater	MINYNLVMYIGLAFYVAIFFTFIVYQMHDRKKDREQWLSNQLTKSFDKAKNDNR
Ga0207901_10173602	3300025045	Marine	MINYNLVLWVGLAFYVAIFFTFIVYQMHDRKKDREQWLSDQLTKSFNKEKNVNR
Ga0207901_10384701	3300025045	Marine	MINYNLVMYIGLAFYIAIFFTFIVYQMHERKLDRELFRQEQLHNSFMKAKNDSFMKAKNDNR
Ga0207901_10401431	3300025045	Marine	MINYNLVMYIGLAFYVAIFFTFIAYQMHERKLDREQWLSNQLTKSFNKAKNDSR
Ga0207896_10033633	3300025071	Marine	MINYNVVLYVMLFVYVAIIIAFVLYQMNDRKKDREQWLSDQLSKSFEKGKNYERDQIRK
Ga0207896_10208281	3300025071	Marine	MINYNLILYVGIAFYVAIFFTFIAYQMHDRKKDREQWLSDQLTKSFNKAKNVNR
Ga0208158_10181831	3300025110	Marine	MINYNLVLWIGLAFYVAIFFTFIVYQMHDRKKDREQWLSDELTKSFNKAKNDNR
Ga0209644_10137423	3300025125	Marine	MINYNLVLYIGLAFYALIFFTFIAYQMHDRKKDREQWLSDQLIEPFNKAKEMKKRANR
Ga0209644_10681771	3300025125	Marine	MINYNLVLYVGIAFYALIFVLFIANEMNKRKKDIEQWKLTQSYNKAKDDNR
Ga0209644_11153001	3300025125	Marine	MIDYNLVLYIGIAFYALLFITFIVYQMHDRKLDREQWKNNELTKSFNKAKEMEKSANR
Ga0208919_10094367	3300025128	Marine	MIDYNLVLWIGLAFYIALFFTFIVYQMHDRKKDREQWLSDELTKSFNKAKNDNR
Ga0209634_11800203	3300025138	Marine	MNYDIILYVGIAFYVAIFITFIVYQMHDREEDRKQWLSDQLTPSFNKEKEKK
Ga0209337_11758082	3300025168	Marine	MIDYNLILYIGLAFYVAIFFTFIVYQMHDRKKDREQWLSDQLSISFEKGKKEDAKNQL
Ga0209337_12159253	3300025168	Marine	MYIGLAFYVAIFFTFIANEMDKRKKDREQWLSDQLTKSFDKAKNDNR
Ga0209337_13378153	3300025168	Marine	MNYNIILYVGIAFYVAIFIAFIMYQMHDREEDRKQWLSDQLTPSFNKEKGKK
Ga0207884_10084961	3300025236	Deep Ocean	MGCMINYNLVLYIGIAFYALIFFTFIAYQMHDRKKDREQWRLTQSYNKAKNDNR
Ga0207884_10249792	3300025236	Deep Ocean	MMINYNLVLYVGLAFYVLIFVLFIANEMNKRKKDIEQWKLTQSYNKAKDDNR
Ga0208182_10180691	3300025251	Deep Ocean	MNYNIILYVGIAFYIAIFITFIMYQMHDREEDRKQWLSDQLTKAFNKEKGKK
Ga0208181_11065081	3300025300	Deep Ocean	MINYNLVLWIGLAFYVAIFFTFIMYQMHDRKKDREQWLSDQLTKSFNKGKNDNR
Ga0208684_10237291	3300025305	Deep Ocean	IILYVGIAFYIAIFITFIMYQMHDREEDRKQWLSDQLTKAFNKEKGKK
Ga0209757_100758613	3300025873	Marine	MINYNLVLYIGLAFYALIFFTFIAYQMHDRKKDIEQWKLNQSFNKAKEMEKVAN
Ga0209757_100776793	3300025873	Marine	GLAFYALIFFTFIAYQMHDRKKDREQWLSDQLIEPFNKAKEMKKRANR
Ga0209757_102037462	3300025873	Marine	MINYNLVLYVGIAFYALIFITFIVYQMHDRKLDKEQWKNDELTKSFNKAKNDSRQDV
Ga0209757_103120821	3300025873	Marine	MINYNLVLYVGIAFYALIFFTFIAYQMHDRKKDIEQWKLTQSYNKAKDDNR
Ga0209815_12035261	3300027714	Marine	MINYNLVLYIGIAFYALIFFTFIAYQMHDRKKDREQWLSDQLTPSFNKGKNVSR
Ga0209709_100725061	3300027779	Marine	MINYNLVLWIGLAFYIAIFFTFIVYQMHERKKDREQWLSDQLTISFNKGKNVNR
Ga0209090_103961572	3300027813	Marine	MINYNLVMYIGLAFYVAIFFTFIAYQMHERKLDREQWLSDQLTPSFNKGKNVDR
Ga0209089_102647622	3300027838	Marine	MYIGLAFYVAIFFTFIVYQMHERKLDREQWLSNQLTKSFNKAKNDSR
Ga0209089_103250521	3300027838	Marine	MNYNLVLWIGLAFYIAIFFTFIVYQMHDRKKDREQWLSDQLTPSFNKGKK
Ga0209501_104852292	3300027844	Marine	MNYNLVLWIGLAFYIAIFFTFIVYQMHERKLDREQWLSDQLTPSFNKGKNDNR
Ga0209402_104328011	3300027847	Marine	MINYNLVLWIGLAFYVAIFFTFIVYQMHDRKKDREQWLSDQLTPSFNKGKNVDR
Ga0302132_100747302	3300031605	Marine	MINYNLVMYIGLAFYVAIFFTFIVYQMHERKLDREQWLSNQLTKSFNKAKNDSR
Ga0302132_102762872	3300031605	Marine	MEGKKQMINYNLMLYIGLAFYVAIFFTFIVYQMHDRKKDRQQWLSNQLSISFEKGKKEDAKNQS
Ga0302119_100213722	3300031606	Marine	MINYNLVLWIGLAFYIAIFFTFIVCQMHERKLDREQWLSDQLTPSFNKGKNDNR
Ga0302119_101223731	3300031606	Marine	MINYNLVLWIGLAFYVAIFFTFIVYQMHDRKKDREQWLSDQLTPSFNKGKNVNR
Ga0302120_102305071	3300031701	Marine	MGSMINYNLVLWVGLTFYVLIIVVFITNEMDKRKKDREQWRLTQSYNKAKNDNR
Ga0315332_105840422	3300031773	Seawater	MINYNLVLWIGLAFYVAIFFTFIVYQMHDRKKDREQWLSDQLTKSFNKGKNDNR
Ga0310121_100258275	3300031801	Marine	MINYNLVLYIGIAFYALIFFTFIAYQMHDRKLDKEQWLSDQLTESFNKAKEMEKHANR
Ga0315316_115997642	3300032011	Seawater	MYIGLAFYVAIFFTFIVYQMHDRKKDREQWLSNQLTKSFDKAKNDNR
Ga0314858_023053_1238_1384	3300033742	Sea-Ice Brine	MINYNLVLWIGLAFYVAIFFTFIVYQMHDRKKDREQWLSDQLTPSFNKG
Ga0314858_092787_135_302	3300033742	Sea-Ice Brine	MINYNLVLYVGIAFYALIFVLFIANEMNKRKKDIEQWKLNQSFNKAKEMEKRANR
Ga0326755_020303_494_649	3300034628	Filtered Seawater	MINYNLVLYIGIAFYALIFFTFIAYQMHDRKKDREQWRLTQSYNKAKNVNR
Ga0326756_003340_315_479	3300034629	Filtered Seawater	MGPMINYNLVLYIGIAFYALIFFTFIAYQMHDRKKDREQWRLTQSYNKAKNVNR
Ga0326741_026937_89_253	3300034654	Filtered Seawater	MINYNLVLYIGLAFYVAIFFTFIAYQMHDRKKDRAQWLSDQLTKSFNKAKNDSR
Ga0326741_032025_488_646	3300034654	Filtered Seawater	MIDYNLVLYVGIAFYALIFITFIVYQMHDRKLDKEQWLSDQLTKSFNKAKND
Ga0326741_083939_352_516	3300034654	Filtered Seawater	MINYNLVLWIGLAFYVAIFFTFIAYQMHDRKLDKEQWLSDQLTISFNKAKNDNR