Metagenome Family F092671

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F092671
Family Type	Metagenome
Number of Sequences	107
Average Sequence Length	89 residues
Representative Sequence	MTDAPLQVDLGAVETLLGNLQFTFVVSPEGDAHIQVYAADPTGAARGGVMLMLDAQGYERLKAIIRGADGVIDRMIGEGRIKRMVLPY
Number of Associated Samples	71
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	75.70 %
% of genes near scaffold ends (potentially truncated)	19.63 %
% of genes from short scaffolds (< 2000 bps)	77.57 %
Associated GOLD sequencing projects	66
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.67

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (97.196 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil (18.692 % of family members)
Environment Ontology (ENVO)	Unclassified (26.168 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (38.318 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 19.83% β-sheet: 28.45% Coil/Unstructured: 51.72%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.67
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.67
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF08448	PAS_4	4.67
PF00072	Response_reg	2.80
PF00856	SET	2.80
PF13646	HEAT_2	2.80
PF01593	Amino_oxidase	2.80
PF14134	DUF4301	2.80
PF12902	Ferritin-like	1.87
PF00486	Trans_reg_C	1.87
PF13432	TPR_16	1.87
PF00106	adh_short	1.87
PF13614	AAA_31	0.93
PF13946	DUF4214	0.93
PF01764	Lipase_3	0.93
PF14534	DUF4440	0.93
PF01022	HTH_5	0.93
PF00480	ROK	0.93
PF03453	MoeA_N	0.93
PF14614	DUF4450	0.93
PF02230	Abhydrolase_2	0.93
PF07470	Glyco_hydro_88	0.93
PF08241	Methyltransf_11	0.93
PF12697	Abhydrolase_6	0.93
PF03400	DDE_Tnp_IS1	0.93
PF13193	AMP-binding_C	0.93
PF07995	GSDH	0.93
PF13414	TPR_11	0.93
PF00589	Phage_integrase	0.93
PF00890	FAD_binding_2	0.93
PF02954	HTH_8	0.93
PF00975	Thioesterase	0.93
PF07992	Pyr_redox_2	0.93
PF13699	DUF4157	0.93
PF02055	Glyco_hydro_30	0.93
PF14509	GH97_C	0.93
PF04055	Radical_SAM	0.93
PF01734	Patatin	0.93
PF01979	Amidohydro_1	0.93
PF00795	CN_hydrolase	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG1940	Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain	Transcription [K]	1.87
COG0303	Molybdopterin Mo-transferase (molybdopterin biosynthesis)	Coenzyme transport and metabolism [H]	0.93
COG1662	Transposase and inactivated derivatives, IS1 family	Mobilome: prophages, transposons [X]	0.93
COG1752	Predicted acylesterase/phospholipase RssA, containd patatin domain	General function prediction only [R]	0.93
COG2133	Glucose/arabinose dehydrogenase, beta-propeller fold	Carbohydrate transport and metabolism [G]	0.93
COG3621	Patatin-like phospholipase/acyl hydrolase, includes sporulation protein CotR	General function prediction only [R]	0.93
COG4667	Predicted phospholipase, patatin/cPLA2 family	Lipid transport and metabolism [I]	0.93
COG5520	O-Glycosyl hydrolase	Cell wall/membrane/envelope biogenesis [M]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.20 %
Unclassified	root	N/A	2.80 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.20 %
Unclassified	root	N/A	2.80 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.20 %
Unclassified	root	N/A	2.80 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	65.42 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.80 %
Unclassified	root	N/A	2.80 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.93 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	0.93 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	59.81 %
Unclassified	root	N/A	2.80 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	0.93 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.93 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.93 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.93 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	59.81 %
Unclassified	root	N/A	2.80 %
unclassified Blastocatellia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia	0.93 %
Chromatiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	0.93 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.93 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.93 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	59.81 %
Unclassified	root	N/A	2.80 %
Blastocatellia bacterium AA13	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium AA13	0.93 %
unclassified Burkholderiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales	0.93 %
Chromatiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae	0.93 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.93 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	59.81 %
Unclassified	root	N/A	2.80 %
Burkholderiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium	0.93 %
Nitrosococcus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Nitrosococcus	0.93 %
Blastocatellia bacterium AA13	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium AA13	0.93 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.93 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	59.81 %
Unclassified	root	N/A	2.80 %
Nitrosococcus watsonii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Nitrosococcus → Nitrosococcus watsonii	0.93 %
Burkholderiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium	0.93 %
Blastocatellia bacterium AA13	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium AA13	0.93 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.93 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002896\|JGI24802J43972_1002056	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1292	Open in IMG/M
3300003203\|JGI25406J46586_10035364	All Organisms → cellular organisms → Bacteria	1824	Open in IMG/M
3300003267\|soilL1_10136290	All Organisms → cellular organisms → Bacteria	1102	Open in IMG/M
3300003321\|soilH1_10043235	All Organisms → cellular organisms → Bacteria	2711	Open in IMG/M
3300004016\|Ga0058689_10003599	All Organisms → cellular organisms → Bacteria	2568	Open in IMG/M
3300004153\|Ga0063455_101224778	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	565	Open in IMG/M
3300005564\|Ga0070664_100394763	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1264	Open in IMG/M
3300005607\|Ga0070740_10001328	All Organisms → cellular organisms → Bacteria	35285	Open in IMG/M
3300005985\|Ga0081539_10171153	All Organisms → cellular organisms → Bacteria	1027	Open in IMG/M
3300006169\|Ga0082029_1780393	Not Available	662	Open in IMG/M
3300006876\|Ga0079217_10255769	All Organisms → cellular organisms → Bacteria	938	Open in IMG/M
3300006918\|Ga0079216_10798237	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	693	Open in IMG/M
3300006918\|Ga0079216_10916859	All Organisms → cellular organisms → Bacteria	663	Open in IMG/M
3300007790\|Ga0105679_10327985	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1099	Open in IMG/M
3300007790\|Ga0105679_10398038	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2115	Open in IMG/M
3300007790\|Ga0105679_11012929	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2572	Open in IMG/M
3300009789\|Ga0126307_11376375	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	572	Open in IMG/M
3300009840\|Ga0126313_10784087	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	775	Open in IMG/M
3300010036\|Ga0126305_10134316	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1525	Open in IMG/M
3300010036\|Ga0126305_11106297	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	546	Open in IMG/M
3300010036\|Ga0126305_11303870	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	501	Open in IMG/M
3300010037\|Ga0126304_10233922	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1207	Open in IMG/M
3300010038\|Ga0126315_10766895	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	633	Open in IMG/M
3300010038\|Ga0126315_11071251	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	543	Open in IMG/M
3300010038\|Ga0126315_11264035	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	502	Open in IMG/M
3300010039\|Ga0126309_10900330	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	586	Open in IMG/M
3300010040\|Ga0126308_10974020	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	593	Open in IMG/M
3300010041\|Ga0126312_10917459	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	639	Open in IMG/M
3300010044\|Ga0126310_11058264	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	643	Open in IMG/M
3300010045\|Ga0126311_10000440	All Organisms → cellular organisms → Bacteria	19740	Open in IMG/M
3300010045\|Ga0126311_10710952	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	804	Open in IMG/M
3300010045\|Ga0126311_10853775	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	737	Open in IMG/M
3300010045\|Ga0126311_11408633	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	582	Open in IMG/M
3300010166\|Ga0126306_10035343	All Organisms → cellular organisms → Bacteria → Acidobacteria	3401	Open in IMG/M
3300010166\|Ga0126306_10287646	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium AA13	1263	Open in IMG/M
3300010166\|Ga0126306_10337340	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1168	Open in IMG/M
3300012093\|Ga0136632_10062357	All Organisms → cellular organisms → Bacteria	1721	Open in IMG/M
3300012093\|Ga0136632_10068198	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1644	Open in IMG/M
3300013297\|Ga0157378_13276494	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	503	Open in IMG/M
3300013307\|Ga0157372_13261405	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	517	Open in IMG/M
3300014487\|Ga0182000_10001831	All Organisms → cellular organisms → Bacteria	4159	Open in IMG/M
3300014487\|Ga0182000_10126700	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	894	Open in IMG/M
3300014488\|Ga0182001_10091743	All Organisms → cellular organisms → Bacteria → Acidobacteria	923	Open in IMG/M
3300014488\|Ga0182001_10176429	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	757	Open in IMG/M
3300014488\|Ga0182001_10379181	All Organisms → cellular organisms → Bacteria	607	Open in IMG/M
3300018429\|Ga0190272_10490062	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1040	Open in IMG/M
3300018432\|Ga0190275_10115711	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Nitrosococcus → Nitrosococcus watsonii	2408	Open in IMG/M
3300018432\|Ga0190275_10738872	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1044	Open in IMG/M
3300018465\|Ga0190269_10042813	All Organisms → cellular organisms → Bacteria → Acidobacteria	2076	Open in IMG/M
3300018465\|Ga0190269_10118008	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1326	Open in IMG/M
3300018465\|Ga0190269_10786041	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	682	Open in IMG/M
3300018466\|Ga0190268_10025879	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1999	Open in IMG/M
3300018466\|Ga0190268_10112957	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1295	Open in IMG/M
3300018466\|Ga0190268_10509892	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	820	Open in IMG/M
3300018466\|Ga0190268_12228932	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	513	Open in IMG/M
3300018890\|Ga0193595_1119891	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	749	Open in IMG/M
3300018920\|Ga0190273_10743239	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	768	Open in IMG/M
3300018920\|Ga0190273_10917406	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	711	Open in IMG/M
3300018946\|Ga0193599_1006869	All Organisms → cellular organisms → Bacteria	4476	Open in IMG/M
3300019377\|Ga0190264_10342422	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	933	Open in IMG/M
3300019767\|Ga0190267_10116619	All Organisms → cellular organisms → Bacteria	1098	Open in IMG/M
3300019767\|Ga0190267_10293293	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	837	Open in IMG/M
3300019767\|Ga0190267_10332665	All Organisms → cellular organisms → Bacteria → Proteobacteria	808	Open in IMG/M
3300019767\|Ga0190267_10437787	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	746	Open in IMG/M
3300019767\|Ga0190267_10450602	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	740	Open in IMG/M
3300020215\|Ga0196963_10080738	All Organisms → cellular organisms → Bacteria	1360	Open in IMG/M
3300020215\|Ga0196963_10156831	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	974	Open in IMG/M
3300020215\|Ga0196963_10183495	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	902	Open in IMG/M
3300021067\|Ga0196978_1000007	All Organisms → cellular organisms → Bacteria	455919	Open in IMG/M
3300021184\|Ga0196959_10030127	All Organisms → cellular organisms → Bacteria	1048	Open in IMG/M
3300024430\|Ga0196962_10081042	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	995	Open in IMG/M
3300025945\|Ga0207679_10385440	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1230	Open in IMG/M
3300027706\|Ga0209581_1012429	All Organisms → cellular organisms → Bacteria	5157	Open in IMG/M
3300027750\|Ga0209461_10003337	All Organisms → cellular organisms → Bacteria	2700	Open in IMG/M
3300028778\|Ga0307288_10164270	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	842	Open in IMG/M
3300030510\|Ga0268243_1001332	All Organisms → cellular organisms → Bacteria	3954	Open in IMG/M
3300030511\|Ga0268241_10048066	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium	909	Open in IMG/M
3300031824\|Ga0307413_11499592	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	596	Open in IMG/M
3300031852\|Ga0307410_10384782	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1130	Open in IMG/M
3300032002\|Ga0307416_101170686	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	874	Open in IMG/M
3300032002\|Ga0307416_102466076	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	619	Open in IMG/M
3300032004\|Ga0307414_10552108	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1027	Open in IMG/M
3300032126\|Ga0307415_100599456	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	980	Open in IMG/M
3300032126\|Ga0307415_101805333	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	592	Open in IMG/M
3300033988\|Ga0334909_012319	All Organisms → cellular organisms → Bacteria → Acidobacteria	1116	Open in IMG/M
3300034002\|Ga0334920_000085	All Organisms → cellular organisms → Bacteria	35847	Open in IMG/M
3300034005\|Ga0334930_037897	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	794	Open in IMG/M
3300034009\|Ga0334944_025709	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1122	Open in IMG/M
3300034009\|Ga0334944_030986	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1020	Open in IMG/M
3300034025\|Ga0334940_002139	All Organisms → cellular organisms → Bacteria	5842	Open in IMG/M
3300034026\|Ga0334946_000117	All Organisms → cellular organisms → Bacteria	46362	Open in IMG/M
3300034026\|Ga0334946_000336	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	13479	Open in IMG/M
3300034030\|Ga0334952_001508	All Organisms → cellular organisms → Bacteria	8896	Open in IMG/M
3300034133\|Ga0334916_007263	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1198	Open in IMG/M
3300034145\|Ga0334963_000480	All Organisms → cellular organisms → Bacteria	15045	Open in IMG/M
3300034172\|Ga0334913_030179	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1179	Open in IMG/M
3300034172\|Ga0334913_034732	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1087	Open in IMG/M
3300034173\|Ga0334925_000587	All Organisms → cellular organisms → Bacteria	11518	Open in IMG/M
3300034221\|Ga0334937_236719	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	504	Open in IMG/M
3300034376\|Ga0334923_002395	All Organisms → cellular organisms → Bacteria → Acidobacteria	3334	Open in IMG/M
3300034376\|Ga0334923_082420	All Organisms → cellular organisms → Bacteria	666	Open in IMG/M
3300034377\|Ga0334931_141561	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	576	Open in IMG/M
3300034391\|Ga0334917_072648	Not Available	643	Open in IMG/M
3300034402\|Ga0334960_027982	Not Available	757	Open in IMG/M
3300034687\|Ga0334905_005594	All Organisms → cellular organisms → Bacteria	1781	Open in IMG/M
3300034779\|Ga0334945_000489	All Organisms → cellular organisms → Bacteria	18139	Open in IMG/M
3300034779\|Ga0334945_025456	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	966	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	85.98%
Host-Associated	Host-Associated	14.02%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	84.11%
Plants	Host-Associated → Plants	14.02%
Aquatic	Environmental → Aquatic	1.87%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	84.11%
Rhizosphere	Host-Associated → Plants → Rhizosphere	10.28%
Freshwater	Environmental → Aquatic → Freshwater	1.87%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.87%
Phyllosphere	Host-Associated → Plants → Phyllosphere	1.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	64.49%
Sand	Environmental → Terrestrial → Soil → Sand	10.28%
Soil Crust	Environmental → Terrestrial → Soil → Soil Crust	8.41%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	8.41%
Ice	Environmental → Aquatic → Freshwater → Ice	1.87%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.87%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.87%
Phylloplane/Leaf Surface	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface	1.87%
Loam	Environmental → Terrestrial → Soil → Loam	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	46.73%
Desert	Environmental → Terrestrial → Soil → Unclassified → Desert	13.08%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	10.28%
Unclassified	Environmental → Terrestrial → Soil → Soil Crust → Unclassified	8.41%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	8.41%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.67%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	1.87%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.87%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.87%
Unclassified	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified	1.87%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.93%

Habitat	Taxonomy	Distribution
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	18.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	17.76%
Sub-Biocrust Soil	Environmental → Terrestrial → Soil → Unclassified → Desert → Sub-Biocrust Soil	11.21%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	8.41%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.48%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	6.54%
Hypolithic Biocrust	Environmental → Terrestrial → Soil → Soil Crust → Unclassified → Hypolithic Biocrust	5.61%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.80%
Biocrust	Environmental → Terrestrial → Soil → Soil Crust → Unclassified → Biocrust	2.80%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	1.87%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.87%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	1.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Desert → Soil	1.87%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	1.87%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	1.87%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.87%
Agave	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified → Agave	1.87%
Termite Nest	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest	0.93%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.93%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002896	Soil microbial communities from Manhattan, Kansas, USA - Sample 300um Nextera	Environmental	Open in IMG/M
3300003203	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300003267	Sugarcane bulk soil Sample L1	Environmental	Open in IMG/M
3300003321	Sugarcane bulk soil Sample H1	Environmental	Open in IMG/M
3300004016	Agave microbial communities from Guanajuato, Mexico - As.Ma.rz	Host-Associated	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005607	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen15_06102014_R2	Environmental	Open in IMG/M
3300005985	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300006169	Termite nest microbial communities from Madurai, India	Environmental	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300007790	Microbial communities of desert soil contaminated with blood from dead anthrax infected zebra in Etosha National Park, Namibia. Combined Assembly of 14 sequencing projects	Environmental	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300012093	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ611 (21.06)	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014487	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG	Environmental	Open in IMG/M
3300014488	Bulk soil microbial communities from Mexico - San Felipe (SF) metaG	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018890	Soil crust microbial communities from Colorado Plateau, Utah, USA - mid-late stage, bundles v1	Environmental	Open in IMG/M
3300018920	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 IS	Environmental	Open in IMG/M
3300018946	Soil crust microbial communities from Colorado Plateau, Utah, USA - mid-late stage, 0 min after wetting v1	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300020215	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1_5	Environmental	Open in IMG/M
3300021067	Soil microbial communities from Anza Borrego desert, Southern California, United States - S3+v_20-13C	Environmental	Open in IMG/M
3300021184	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1+v_20	Environmental	Open in IMG/M
3300024430	Soil microbial communities from Anza Borrego desert, Southern California, United States - S3+v_20	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027706	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen15_06102014_R2 (SPAdes)	Environmental	Open in IMG/M
3300027750	Agave microbial communities from Guanajuato, Mexico - As.Ma.rz (SPAdes)	Host-Associated	Open in IMG/M
3300028778	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142	Environmental	Open in IMG/M
3300030510	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG (v2)	Environmental	Open in IMG/M
3300030511	Bulk soil microbial communities from Mexico - Amatitan (Am) metaG (v2)	Environmental	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032004	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3	Host-Associated	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300033988	Soil microbial communities from Mojave Desert, California, United States - 5NOC	Environmental	Open in IMG/M
3300034002	Biocrust microbial communities from Mojave Desert, California, United States - 16HMC	Environmental	Open in IMG/M
3300034005	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 26HNS	Environmental	Open in IMG/M
3300034009	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 40SMS	Environmental	Open in IMG/M
3300034025	Biocrust microbial communities from Mojave Desert, California, United States - 36SMC	Environmental	Open in IMG/M
3300034026	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 42SMS	Environmental	Open in IMG/M
3300034030	Biocrust microbial communities from Mojave Desert, California, United States - 48SNC	Environmental	Open in IMG/M
3300034133	Biocrust microbial communities from Mojave Desert, California, United States - 12HMC	Environmental	Open in IMG/M
3300034145	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 59SNS	Environmental	Open in IMG/M
3300034172	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 9HMS	Environmental	Open in IMG/M
3300034173	Biocrust microbial communities from Mojave Desert, California, United States - 21HNC	Environmental	Open in IMG/M
3300034221	Biocrust microbial communities from Mojave Desert, California, United States - 33SMC	Environmental	Open in IMG/M
3300034376	Biocrust microbial communities from Mojave Desert, California, United States - 19HNC	Environmental	Open in IMG/M
3300034377	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 27HNS	Environmental	Open in IMG/M
3300034391	Biocrust microbial communities from Mojave Desert, California, United States - 13HMC	Environmental	Open in IMG/M
3300034402	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 56SNS	Environmental	Open in IMG/M
3300034687	Soil microbial communities from Mojave Desert, California, United States - 1NOC	Environmental	Open in IMG/M
3300034779	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 41SMS	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI24802J43972_10020562	3300002896	Soil	MQDAPTQIDLGSIETLLGNLQFTFVISPEGNAHIQVYAIDPSSPAKGGVMLMLDAQRYERLREIIRGADAAIDRMIGEGRIKRMVLPY*
JGI25406J46586_100353643	3300003203	Tabebuia Heterophylla Rhizosphere	MDNAPLQVELGTVETLIGNLQFTFVVSPEGDAHVQVYASDPSNASKNAVSVMLDARGFERLKEIVKGADGVIDRMIREGRIKRMVLPY*
soilL1_101362902	3300003267	Sugarcane Root And Bulk Soil	LEDTPLQVDLGTVETLLGNLEFTFVVSGEGNAHVQVYAGLPPGAGKGGVMIMLDAQGYERLKAIIRGADGVIDRMIGEGKIKRMVLPY*
soilH1_100432353	3300003321	Sugarcane Root And Bulk Soil	MQGETSQTDLGAIETLIGNLQFTFVLSPEGDAHIQVYAVDPSNASKPGVMLMLDAKGLERLKAIVKNAEHVIDRMIREGRIKRMVLPF*
Ga0058689_100035992	3300004016	Agave	LQNPPLHVDLGAVETLLGSLQFTFVVSAEGDAHIQVSASNPSSAGKGDVLLMLDAQGYERLRAIIRGADGVIDRLIREGKVRRMVLPY*
Ga0063455_1012247781	3300004153	Soil	MQGETLQTELGAVETLLGNLQFTFVVNPEGDAHIQVYAIDPSSTGKGGIMLMLDANGFERLKVIVKSADGVIDRMIREGKIKRMVLPY*
Ga0070664_1003947632	3300005564	Corn Rhizosphere	LQEAPLHVDLGAVETLLGNLQFTFVLSAEGDAHIQVYATDPSSAGKGSVMLMLDAQGYERLKAILKGADGVVRRMIGEGKIKRMVLPY*
Ga0070740_100013285	3300005607	Surface Soil	MPDAPLNIALGKVETLIGELEFTFVVSETGDAHVQVSAANAGQGSVLLMLDAGGYERLKAIIRSADGVIDRMIREGRIKRMVLPY*
Ga0081539_101711532	3300005985	Tabebuia Heterophylla Rhizosphere	VQQNPPLHVDLGSIETLLGSLQFTFVVDASGDAHIQVSASNPSGGAKGGDVLLMLDAQGYERLRAIVRGADGVIDRLIREGKVRRMALPY*
Ga0082029_17803931	3300006169	Termite Nest	VTDAPLQVDLGSVETLLGNLQFTFVVSVEGDAHIQLYATDPSRAGGGGVMLMLDAQGYERLKAIVKGADRVIDRM
Ga0079217_102557693	3300006876	Agricultural Soil	VTRAPEGRLTQVQPAPVQIDLGAVETLLGSLNFTFVVSAEGDAHIQVYASDPSSALKSGVMLMLDAQGYERLKAIVKGADAAIDRMLAEGRIKRMVLPY*
Ga0079216_107982372	3300006918	Agricultural Soil	MPDVMPQAPQQIELGAVETLLGNLQFTFVVSAEGDAHIQVYATDPSGPGKGGVMLMLDAQGFERLKAIVKGADGVIDRMIGEGRIRRMVLPY*
Ga0079216_109168592	3300006918	Agricultural Soil	VQPPPVQIDLGAVETLLGNLNFTFIISAEGDAHIQVYASDPSSALKSGVMLMLDAQGYERLKAIVKGADAAIDRMLAEGRIKRMVLPY*
Ga0105679_103279852	3300007790	Soil	MTELQDAPLYIDLGAAETLLGNLQFTFVVSAEGDAHIQVYAADPSSAGKGGVMLMLDAQGYERLKAIVRGADGVIDRMIGEGKIKRMVPPY*
Ga0105679_103980384	3300007790	Soil	MQGETQQTDLGSIETLIGNLQFTFVVSPEGDAHIQIYAADPSSASRPGVALMLDANGFERLKAIVRNADGVIDRMISQGRIKRMVLPF*
Ga0105679_110129292	3300007790	Soil	MTTQGEPPKPLHTDLGSVETLIGNLHFTFVVSPEGDAHIQLYAADPSSASKSGVTLMLDANGFERLKAIVRNADGVIDRMISEGRIKRMVLPF*
Ga0126307_113763751	3300009789	Serpentine Soil	MMAEDKPVTDAPLQIDLGAVETLLGNLQFTFVVSPEGDAHIQIYATDPSSATKSGVTLMLDANGLERLKAIVRNTDGVIDRMIREGRIKR
Ga0126313_107840871	3300009840	Serpentine Soil	MTMQGEPLHTELGAVETLIGNLQFTFVISPEGDAHIQVYAADPSSASKSGVTLMLDASGFERLKAIVRNADGVIDRMIREGRIKRMVLPF*
Ga0126305_101343162	3300010036	Serpentine Soil	VTDTSLLVELGAVETLLGNLQFTFVVSAEGDAHIQVYAADPSSAGKGGVMLMLDAQGYERLKEIIKGTDGVIDRMIREGKIKRMVLPY*
Ga0126305_111062972	3300010036	Serpentine Soil	VDLGAVETLLGNLQFTFVVSAEGDAHIQVYAKDPSSPSKGGVMLMLDAQGYERLKAIIRDADAVADRMIGQGRIKRMVLPY*
Ga0126305_113038701	3300010036	Serpentine Soil	MPDAPLQIELGAVETLLGNLQFTFVVSAEGDAHIQVYATDPSSTGKGGVMLMLDAQGYERLKAILGGADGVIDRMIREGRIRRMVLPY*
Ga0126304_102339222	3300010037	Serpentine Soil	VTDASLLVELGAVETLLGNLQFTFVVSAEGDAHIQVYAADPSSAGKGGVMLMLDAQGYERLKEIIKGTDGVIDRMIREGKIKRMVLPY*
Ga0126315_107668952	3300010038	Serpentine Soil	LQESPLQIDLGAVETLLGSLQLTFVVSAEGDAHIQVYATDPSSSGKGGVMLMLDAQGYERLKGIIRGADVVIDRMIGEGKIRRMVLPY*
Ga0126315_110712512	3300010038	Serpentine Soil	MTFEDKPMTDAPLQIDLGAVETLLGNLQFTFVVSPEGDAHIQVYAADPTSAVKGGVMVMLDAQGHERLKAIIRGADGVIDRMIGEG
Ga0126315_112640352	3300010038	Serpentine Soil	GKETNAVPDAPLQIDLGAVETLLGNLQFTFVVSAEGDAHIQVYATDPSTAGRGGVMLMLDARGYERLKEIVRGADGVIDRMIAEGKIKRMVLPY*
Ga0126309_109003301	3300010039	Serpentine Soil	MGRRIRVGKESKDVTDAPLQIELGSVETLLGNLQFTFVVSPAGDAHIQVYATYPSTAGKGGVMLMLDARGYERLKAIVRGADGVIDRMISEGKIRRMVLPY*
Ga0126308_109740202	3300010040	Serpentine Soil	VETLLGNLQFTFVVNGDGDAHIQVYATDPTGAGKGGVMLMLDAQGYERLKAIVEGADRVIDRMIGEGKIKRMV
Ga0126312_109174592	3300010041	Serpentine Soil	MSDAAQQIELGAVETLLGNLQFTFVVSPEGDAHIQVYAKDPSSPSKGGVMLMLDAQGYERLKAIIRDADAVADRMIGQGRIKRMVLPY*
Ga0126310_110582642	3300010044	Serpentine Soil	MKRRGEPESEDKENRPMEGEPLHKDLGAVETLIGNLQFTFVVSPEGDAHIQIYATDPSSASKHGVTLMLDANGFERLKAIVRNADGVIDRLIREGRIKRMVLPF*
Ga0126311_1000044014	3300010045	Serpentine Soil	MTTQGEPLHTDLGAIETLIGNLQFTFVVSPEGDAHIQIYATDPSSATKSGVTLMLDANGLERLKAIVRNTDGVIDRMIREGRIKRMILPF*
Ga0126311_107109521	3300010045	Serpentine Soil	IIQTADVRQDLSHTDGVWLYNVGKETNDMQEAPVQLELGSVETLLGNLQLTFVVSPEGDAHIQLYATDPSAAGKGGVMLMLDARGFERLKEIVRGADGVIDRMISEGTIKRMVLPY*
Ga0126311_108537751	3300010045	Serpentine Soil	VAWLYNVGKETNDMQEAPLQLELGSVETLLGNLQFTFVVSPEGDAHIQVYATDPSASGKGGVMLMLDARGYERLKEIVGGADGVI
Ga0126311_114086332	3300010045	Serpentine Soil	MEGEPLHKDLGAVETLIGNLQFTFVVSPEGDAHIQIYAADPSSASKHGVTLMLDANGFERLKAIVRNADGVIDRLIREGRIKRMVLPF*
Ga0126306_100353433	3300010166	Serpentine Soil	MTMQGEPLHTELGSVETLIGNLQFTFVISPEGDAHIQVYAADPSSASKSGVTLMLDANGFERLKVIVRNADGVIDRMIREGRIKRMVLPF*
Ga0126306_102876461	3300010166	Serpentine Soil	PLQLDLGTVETLIGNLQFTFVVSPEGDAHVQVSASNPPNAGGVMVMLDAGGFERLKAIVKGADGVIDRLIGEGRIKRMVLPY*
Ga0126306_103373402	3300010166	Serpentine Soil	VKPNKEKTPLPDAPLRVDLGAAETLIGSLRFTFVVSAEGDAYVQVDAGDPTNAGRGGAMVMLDANGYERLKAIIKGADDVIDRLIREGRIKRMVLPY*
Ga0136632_100623573	3300012093	Polar Desert Sand	MQDALSQIDLGAVETLIGNLQFTFVVSPNGDAHLQVYATDPSRASKAGVSVMLDANGFEQLKAIIKGADGVIDRMIQEGRIKRMVLPY*
Ga0136632_100681982	3300012093	Polar Desert Sand	MQETPLQVDLGTVETLIGNLQFTFVMSPEGDAHIQVYAGDPSSMSRASVMVMLDANGYERLKAIIKGADGVIDRLIKEGRIKRMVLPY*
Ga0157378_132764941	3300013297	Miscanthus Rhizosphere	MQSETSQTDLGTIETLIGNLQFTFVLSPEGDAHIQVYAVDPSSASKGGVMLMLDAKGLERLKAIVKNAESVIDRMIREGRIKRMVMPF*
Ga0157372_132614052	3300013307	Corn Rhizosphere	DRRKHPEVVTTLQEAPLHVDLGAVETLLGNLQFTFVLSAEGDAHIQVYATDPSSAGKGGVMLMLDAQGYERLKAILKGADGVVRRMIGEGKIKRMVLPY*
Ga0182000_100018313	3300014487	Soil	LKKEVNGVARKETDTLQQNPPLHVDLGSIETLLGSLQFTFVVDASGDAHIQVSASNPSGGAKGGDVLLMLDAQGYERLRSIVRGADGVIDRLIREGKVRRMALPY*
Ga0182000_101267002	3300014487	Soil	VTTELQDAPLHIDLGTVETLLGNLQFTFVVSAGGDAHIQVYATDPSSAGKGGVMLMLDAQGYERLKAVIKGADGVIDRMIGEGKIRRMVLPY*
Ga0182001_100917432	3300014488	Soil	MPDAPVQLDLGAVETLIGSLQFNFVVSPEGDAHIQVSASNPSSAGSVMLMLDANGFEQLKTIIKGADRVIDRLIREGRIKRMVLPY*
Ga0182001_101764291	3300014488	Soil	MAGVPLQVELGTVETLLGNLRFTFVVNAEGDGHVQVYATDPSDLKKKDIVVMLDAGGYERLKTIIKETDAVIDRMIRAGRIKKMVLPY*
Ga0182001_103791812	3300014488	Soil	LQQNPPLHVDLGSVETLLGSLQFTFVVSAEGDAHIQVSASNPSGGAGKGDVLLMLDAQGYERLRGIIRGADGVIDRLIREGKVRR
Ga0190272_104900622	3300018429	Soil	MPDAPLQVDLGAVETLIGGLRFTFVVSGEGDAHIQVDAGNPSSAGVMVMLDANGYEQLKAIIKGADGVIDRLIREGRIKRMVLPY
Ga0190275_101157113	3300018432	Soil	MPDAPVQLDLGSVETLLGNLQFTFVVSPEGDAHIQVFATDPSAAGKGGVMLMLDARGYERLKAIVGGVDGVIDRMIAEGKIKRMVLPY
Ga0190275_107388722	3300018432	Soil	VQPTSSKVDLGAVETLLGSLSFTFVVSAEGDAHIQVYAADPSNAGKPGVMLMLDAQGFERLKAIVKGADATIDRMIVEGRIKRMVLPY
Ga0190269_100428133	3300018465	Soil	MSDAPPQPDAPLQLDLGSVETLLGNLQFTFVVSPEGDAHIQVYATDPSTAGRGGVMLMLDARGYERLKAIVGGADGVIDRMIAEGKIKRMVLPY
Ga0190269_101180082	3300018465	Soil	LQDSPLHIDLGTVETLLGNLQFTFVVSAEGDAHIQVYATDPSSAAKGGVMLTLDAHGYERLKAIIRGADGVIDRMIGEGKIKRMVLPY
Ga0190269_107860411	3300018465	Soil	GAVETLLGSLQFTFVVSAEGDAHIQVFATDPSTPGRGGVMLMLDAGGFERLKSIVKGADGVIDRMIAEGRIRRMVLPY
Ga0190268_100258793	3300018466	Soil	MQEAPLQLELGSVETLLGNLQFTFVVSPEGDAHIQLYATDPSTAGKGGVMLMLDARGFERLKEIVRGTDGVIDRMISEGKIRRMVLPY
Ga0190268_101129572	3300018466	Soil	VTDDPLQIDLGAVETLLGNLQFTFVVSAEGDAHIQVYATDPSSAAKGGVMLTLDAHGYERLKAIIRGADGVIDRMIGEGKIKRMVLPY
Ga0190268_105098922	3300018466	Soil	VQPTSSKVDLGAVETLLGNLSFTFVVSAEGDAHIQVYAADPSNAGKPGVMLMLDAQGFERLKAIVKGADATIDRMIVEGRIKRMVLPY
Ga0190268_122289321	3300018466	Soil	MPDAPLQLDLGAVETLIGSLRFTFVVSAEGDAYVQVDAGDPTNAGRGGAMLMLDANGYEKLKAIIKGADDVIDRLIREGRIKRMVLPY
Ga0193595_11198912	3300018890	Soil	MQDPKQQIDLGAVETLLGNLQFTFVVSGEGDAHIQVYATDPSGPGRGGVMLMLDAQGYERLKAIIKGADGVIDRMIGEGRIRRMVLPY
Ga0190273_107432391	3300018920	Soil	MTAEDKPVTDATPQMDLGAVETLLGNLQFTFVVSPEGDAHIQIYAADTTSAVKGGIMIMLDAQGYERLKAIIKGADRVIDRMIGEGRIKRMVLPY
Ga0190273_109174061	3300018920	Soil	RGGGAELGDEENMTTQGEPLHAELGSVETLIGNLQFTFVVSPEGDAHIQVYAADPSSASKSGVTLMLDANGFERLKAVVRNADGVIDRMIREGRIKRMVLPF
Ga0193599_10068692	3300018946	Soil	MADAPLHVDLGTLETLIGSLQLTFVVSAEGDAHLQLYATDPSRAGGAGVLLMLDAAGYERLKGLVREADSTIDRMIAEGRIKRMVLPY
Ga0190264_103424222	3300019377	Soil	MPDAPLQVDLGAVETLIGSLRFTFVVSAEGDAYVQVDAGDPTNAGRGGAMLMLDANGYEKLKAIIKGADDVIDRLIREGRIKRMVLPY
Ga0190267_101166192	3300019767	Soil	VTDAPLQIDLGAVETLLGNLQFTFVVSPEGDAHIQVYATDPTSAVKSGIMLMLDAQGHEKLKAIIKSADGVIDRMIGE
Ga0190267_102932932	3300019767	Soil	LENAPLQVDLGAVETLLGNLQFTFVVSAEGDAHIQVYAKDPSSPSKGGVMLMLDAQGYERLKAIIRDADAVADRMIGQGRIKRMVLPY
Ga0190267_103326651	3300019767	Soil	VADAPFQVDLGAVETLIGNLQFTFVLSPEGDAHIQVYAANPSSAGGVTLMLDANGFDRLKSVVREADNMIDRLIGEGRIKRM
Ga0190267_104377872	3300019767	Soil	MQEAPLQLELGSVETLLGNLQFTFVVSPEGDAHIQVYATDPSTAGKGGVMLMLDARGYERLKEIVRGTDGVIDRMISEGKIKRMVLP
Ga0190267_104506022	3300019767	Soil	MTTQGEPLYTELGAVETLIGNLQFTFVISPEGDAHIQVYAADPSSASKYGVTLMLDANGFERLKAIVRNADGVIDRMIREGRIKRMVLPF
Ga0196963_100807382	3300020215	Soil	MQDAPVQIDLGSVETLIGNLQFTFVVSPEGDAHLQLYASDPSSAGKAGVSLMLDAGGYERLKAIIRDADGVIDRMISEGRIKRMVLPY
Ga0196963_101568311	3300020215	Soil	MADAPLQIELGTLETLIGNLQFTFVVSADGDGHLQLYATDPSRAGGAGVLLMLDAAGYERLKAVIRDADSTIDRMIGEGRIKRMVMPY
Ga0196963_101834951	3300020215	Soil	ERKTTDVTDAPLQIDLGSVETLLGNLQFTFVVSAEGDAHVQVYATDASKAGGGGVVLMLDAQGYERLKAIVKGADRVIDRMIGEGKIKRMVLPY
Ga0196978_1000007125	3300021067	Soil	VTDAPLQIDLGSVETLLGNLQFTFVVSAEGDAHVQLYATDPSKAGGGGVVLMLDAQGLERLKAIVKGADRVIDRMIAEGKIKRMVLPY
Ga0196959_100301273	3300021184	Soil	PDAPLQLDLGSVETLLGNLQFTFIVSPEGDAHIQVYATDPSAAGKGGVMLMLDARGYERLKAIVGGTDRVIDRMIAEGKIKRMVLPY
Ga0196962_100810421	3300024430	Soil	MPDAPLQVDLGAVETLIGTLRFTFVVSGEGDAYMQVDAGNPSGTGVMVMLDANGYEQLKAIFKGADGVIDRLIREGRIKRMVLPY
Ga0207679_103854402	3300025945	Corn Rhizosphere	LQEAPLHVDLGAVETLLGNLQFTFVLSAEGDAHIQVYATDPSSAGKGSVMLMLDAQGYERLKAILKGADGVVRRMIGEGKIKRMVLPY
Ga0209581_10124293	3300027706	Surface Soil	MPDAPLNIALGKVETLIGELEFTFVVSETGDAHVQVSAANAGQGSVLLMLDAGGYERLKAIIRSADGVIDRMIREGRIKRMVLPY
Ga0209461_100033373	3300027750	Agave	LQNPPLHVDLGAVETLLGSLQFTFVVSAEGDAHIQVSASNPSSAGKGDVLLMLDAQGYERLRAIIRGADGVIDRLIREGKVRRMVLPY
Ga0307288_101642701	3300028778	Soil	MQGETLQTELGAVETLLGNLQFTFVVSPEGDAHIQVYAIDPSSAGKGGVMLMLDANGFERLKAIVKGADGLIDRMIREGKIKRMVLPY
Ga0268243_10013323	3300030510	Soil	LQQNPPLHVDLGSIETLLGSLQFTFVVDASGDAHIQVSASNPSGGAKGGDVLLMLDAQGYERLRSIVRGADGVIDRLIREGKVRRMALPY
Ga0268241_100480661	3300030511	Soil	PHPARRAWRTKVQDTPLQVDLGTVETLIGSLQFTFVLSQGGDAHIQVDASAPSKGGVVLMLDAQGFERLKAIVAGADGVIDRMIAEGKVRRMVLPY
Ga0307413_114995921	3300031824	Rhizosphere	TKLQEAPLHVDLGTVETLLGHLQFIFVVSAEGDAHIQVYASDPSNAGKGGVMLMLDAQGYERLKEIVRGADAAADRMIREGKIKRMVLPY
Ga0307410_103847822	3300031852	Rhizosphere	MTKLQEAPLHVDLGTVETLLGHLQFIFVVSAEGDAHIQVYASDPSNAGKGGVMLMLDAQGYERLKEIVRGADAAADRMIREGKIKRMVLPY
Ga0307416_1011706862	3300032002	Rhizosphere	MTKLQEAPLHVDLGTIETLLGHLQFTFVVSAEGDAHIQVYASDPSSAGKGGVMLMLDAQGYERLKEIVRGADTTADRMIREGKIKRMVLPY
Ga0307416_1024660762	3300032002	Rhizosphere	VKDNTQEPAATQIELGSVETLLGNLQFTFVVSPGGDAHIQVYAADPSSAGKGGVMIMLDAQGYERLKAIVKGADGVIDRMIVEGKIKRMVLPY
Ga0307414_105521082	3300032004	Rhizosphere	LQEAPLHVDLGTVETLLGHLQFIFVVSAEGDAHIQVYASDPSNAGKGGVMLMLDAQGYERLKEIVRGADAAADRMIREGKIKRMVLPY
Ga0307415_1005994562	3300032126	Rhizosphere	MPDAPLQLDLGSVETLLGNLQFTFVVSPEGDGHILVYATDPSTTGKGGVMLMLDAQGYERLKAIVKGADGLIDRMINEGKIKRMVLPY
Ga0307415_1018053331	3300032126	Rhizosphere	MPEAPVQIDLGAVETLLGNLQFTFVLSPEGDAHIQVYAVDPSSAGKGSVMMMLDAAAFEQLKAVVRDADGVIDRLLAQGKVKRMVLPY
Ga0334909_012319_381_644	3300033988	Soil	MQEAPLQIDLGTVETLLGNLQFTFVVNAEGDAHIQLSVDSASATKGGVVLMLDAQGYERLKSVVKGADSVIDRMIAEGRIRRMVLPY
Ga0334920_000085_35430_35696	3300034002	Hypolithic Biocrust	MPEAPVQIELGAEETLLGNLQFTFVMSPEGDAHIQVYASDPSSAGKGGVMLMLDAGGYEQLKAIVRGADKAIDRLIAEGRVKRMVLPY
Ga0334930_037897_296_568	3300034005	Sub-Biocrust Soil	MHMPEAPVQIELGAVETLLGNLQFTFVMSPEGDAHIQVYASDPSGAGKGGVLLMLDAAGYERLKAVVRGADGVIDRLIAEGRVKRMVLPY
Ga0334944_025709_20_286	3300034009	Sub-Biocrust Soil	MPDTPLQLELGAVETLLGNLQFTFVVSAEGDAHIQVYATDPSRPGKDGVMLMLDAGGFERLKAIVRGADGAIDRMIAEGRIKRMVLPY
Ga0334944_030986_502_768	3300034009	Sub-Biocrust Soil	MTDAPLQVDLGAVETLLGNLQFTFVVSPEGDAHIQVYAADPTGAARGGVMLMLDAQGYERLKAIIRGADGVIDRMIGEGRIKRMVLPY
Ga0334940_002139_4903_5169	3300034025	Biocrust	LQDAPLQVDLGSVETLLGNLQFTFVVSPEGDAHVQLYVTDPSAAGKAGVMVMLDAQGYERLKAIISGADSVIDRMIREGRIKRMVLPY
Ga0334946_000117_43307_43573	3300034026	Sub-Biocrust Soil	LQNAPLQVDLGAVETLLGNLQFTFVVSAEGDAHIQVYARDPSSPSKGGVMLMLDARGYERLKAIIRDADAAADRMIGEGRIKRMVLPY
Ga0334946_000336_5839_6105	3300034026	Sub-Biocrust Soil	MPDATHQVDLGAVETLLGNLQFTFVVSAEGDAHIQVYATDPSKPGKDGVMLMLDARGFEGLKAVVRGADGVIDRMIAEGKIKRMVLPY
Ga0334952_001508_5874_6179	3300034030	Biocrust	MNFGRGLWKETFSVQNAPLQVDLGAVETLLGNLQFTFVVSPEGDAHIQLYATDPSSPGKGGVMLMLDAQGFERLKAIVRGADGVIDRMIGEGKIRRMVLPY
Ga0334916_007263_481_747	3300034133	Hypolithic Biocrust	MADAPLHVDLGTLETLIGSLQLTFVVSGEGDAHLQLYATDPSRAGGAGVLLMLDAAGYERLKGLVREADSTIDRMIAEGRIKRMVLPY
Ga0334963_000480_1559_1825	3300034145	Sub-Biocrust Soil	MPEAPVQIELGAVETLLGNLQFTFVMSPEGDAHIQVYASDPSSAGKGGVMLMLDAGGYERLKAVVRGADKVIDRLIVEGKVKRMVLPY
Ga0334913_030179_81_347	3300034172	Sub-Biocrust Soil	MQEAPLHIDLGTVETLLGHLQFTFVVSAEGDAHVQVYASDPSSPVKGGVMLMLDAQGFERLKGIIKGADGVIDRMIGEGKIRRMVLPY
Ga0334913_034732_692_964	3300034172	Sub-Biocrust Soil	MSGKPDAATQVDLGTVETLLGSLQFTFVVDAEGDAHIQVYATDPSGPGKGVVIMLDAQGYERLKAIVGGAERAIDRMIAGGKIRRMVLPY
Ga0334925_000587_5562_5828	3300034173	Hypolithic Biocrust	MTDAPLQIDLGAVETLLGNLQFTFVVSPEGDAHIQVYATDPTSAVKAGIMVMLDAQGHEKLKAIIKGADGVIDRMIGEGRIKRMVLPY
Ga0334937_236719_119_388	3300034221	Biocrust	MQDAHPQQLDLGAVETLLGNLQFTFVVSPEGDAHVQVYATDPTSASKGGVVIMLDAAGYERLKSIIGDADRAIDRMIAEGRIRRMVLPY
Ga0334923_002395_931_1254	3300034376	Hypolithic Biocrust	VPRRSGSVRGFEFGKETDIMPDAPVQIELGAVETLLGNLQFTFVVSAEGDAHIQVYATDPSKAGRDGVMLMLDGRGYERLREIIRGADGAIDRLIGEGKIKRMVLPY
Ga0334923_082420_415_666	3300034376	Hypolithic Biocrust	VRFKLEDTPPQVDLGTVETLLGSLQFTFVLSPEGDAHIQVYAVDPSSAGKGGVMLMLDAQGYERLKAIINGADRVIDRMIGEGK
Ga0334931_141561_94_372	3300034377	Sub-Biocrust Soil	VRFKLEDTPPQVDLGTVETLLGSLQFTFVLSPEGDAHIQVYAVDPSSAGKGGVMLMLDAQGYERLKAIINGADRVIDRMIGEGKIRRMVLPY
Ga0334917_072648_122_388	3300034391	Hypolithic Biocrust	MQQPPVHIDLGTVETLIGSVQFTFVVSADGDAHVQVSASNPTGGGKGEVLVLLDGNGFERLKQIIRGADGVIDRMIREGRIKRMVLPY
Ga0334960_027982_57_326	3300034402	Sub-Biocrust Soil	LQQNPPLHVDLGAVETLLGSLQFTFVVSAEGDAHIQVSASNPSSAGKGDVLLMLDAQGYERLRAIVRGADGVIDRLIREGRVRRMVLPY
Ga0334905_005594_1293_1577	3300034687	Soil	MQDTPSEKEAPLQVDLGTVETLIGNLQFTFVISPEGDAHIQLYAGDPAGVGQGRVLLMLDAQGFERLKAIVKGADREIDRMIREGRIKRMVLPY
Ga0334945_000489_8384_8653	3300034779	Sub-Biocrust Soil	MQDAPSQQLDLGAVETLLGSLQFTFVVSPEGDAHVQVYAADPTSAAKGGVMIMLDAAGYERLKAIIKGADRAIDRMIAEGRIKRMVLPY
Ga0334945_025456_615_902	3300034779	Sub-Biocrust Soil	MTAEDKPVTDAPLQIDLGAVETLLGNLQFTFIVSPEGDAHIQVYAADPTSAAKGGVMLMLDAQGYERLRAIIKGADGVIDRMIGEGKIKRMVLPY

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F092671

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences