Metagenome / Metatranscriptome Family F092669

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F092669
Family Type	Metagenome / Metatranscriptome
Number of Sequences	107
Average Sequence Length	75 residues
Representative Sequence	HVVGYLYNSNIKDAANVWLRVDRLGADGAVAGTYRRRVVGDVLSGGRSLFDVPVGEAAATYQVSVETVDWVKECR
Number of Associated Samples	96
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	5.71 %
% of genes near scaffold ends (potentially truncated)	89.72 %
% of genes from short scaffolds (< 2000 bps)	82.24 %
Associated GOLD sequencing projects	90
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (77.570 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (8.411 % of family members)
Environment Ontology (ENVO)	Unclassified (33.645 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (37.383 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 62.67% Coil/Unstructured: 37.33%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF02230	Abhydrolase_2	36.45
PF01757	Acyl_transf_3	15.89
PF00881	Nitroreductase	4.67
PF14595	Thioredoxin_9	1.87
PF00296	Bac_luciferase	1.87
PF01061	ABC2_membrane	0.93
PF00501	AMP-binding	0.93
PF02371	Transposase_20	0.93
PF03061	4HBT	0.93
PF00528	BPD_transp_1	0.93
PF07969	Amidohydro_3	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	1.87
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	77.57 %
Unclassified	root	N/A	22.43 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	77.57 %
Unclassified	root	N/A	22.43 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	77.57 %
Unclassified	root	N/A	22.43 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	42.06 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	24.30 %
Unclassified	root	N/A	22.43 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	24.30 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	24.30 %
Unclassified	root	N/A	22.43 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.87 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	24.30 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	24.30 %
Unclassified	root	N/A	22.43 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.87 %

Name	Rank	Taxonomy	Distribution
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	23.36 %
Unclassified	root	N/A	22.43 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	13.08 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.87 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	23.36 %
Unclassified	root	N/A	22.43 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	13.08 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.87 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090015\|GPICI_8682542	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1477	Open in IMG/M
2170459005\|F1BAP7Q01B7Q15	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	512	Open in IMG/M
3300001228\|SwM_140699	Not Available	553	Open in IMG/M
3300002245\|JGIcombinedJ26739_101304589	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	617	Open in IMG/M
3300004052\|Ga0055490_10102027	Not Available	809	Open in IMG/M
3300005183\|Ga0068993_10359532	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	534	Open in IMG/M
3300005328\|Ga0070676_10011088	All Organisms → cellular organisms → Bacteria → Proteobacteria	4898	Open in IMG/M
3300005332\|Ga0066388_103843788	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	766	Open in IMG/M
3300005347\|Ga0070668_100624505	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	945	Open in IMG/M
3300005365\|Ga0070688_100446133	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	966	Open in IMG/M
3300005441\|Ga0070700_101050700	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	672	Open in IMG/M
3300005518\|Ga0070699_101017765	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	760	Open in IMG/M
3300005530\|Ga0070679_102087926	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	516	Open in IMG/M
3300005543\|Ga0070672_101786006	Not Available	553	Open in IMG/M
3300005578\|Ga0068854_100001559	All Organisms → cellular organisms → Bacteria → Proteobacteria	13905	Open in IMG/M
3300005842\|Ga0068858_101737878	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	616	Open in IMG/M
3300005843\|Ga0068860_100178361	All Organisms → cellular organisms → Bacteria	2053	Open in IMG/M
3300005921\|Ga0070766_10965881	Not Available	585	Open in IMG/M
3300006172\|Ga0075018_10019756	All Organisms → cellular organisms → Bacteria	2595	Open in IMG/M
3300006176\|Ga0070765_100012632	All Organisms → cellular organisms → Bacteria	6002	Open in IMG/M
3300006755\|Ga0079222_12426846	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	525	Open in IMG/M
3300006846\|Ga0075430_101544235	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	545	Open in IMG/M
3300006852\|Ga0075433_11301731	All Organisms → cellular organisms → Bacteria → Proteobacteria	630	Open in IMG/M
3300006881\|Ga0068865_101672631	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	573	Open in IMG/M
3300009053\|Ga0105095_10765123	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	540	Open in IMG/M
3300009093\|Ga0105240_10421578	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1499	Open in IMG/M
3300009147\|Ga0114129_11527767	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	820	Open in IMG/M
3300009820\|Ga0105085_1110133	All Organisms → cellular organisms → Bacteria → Proteobacteria	545	Open in IMG/M
3300010048\|Ga0126373_12116563	Not Available	624	Open in IMG/M
3300010362\|Ga0126377_10425754	All Organisms → cellular organisms → Bacteria → Proteobacteria	1345	Open in IMG/M
3300010366\|Ga0126379_11279884	All Organisms → cellular organisms → Bacteria	839	Open in IMG/M
3300010399\|Ga0134127_10038425	All Organisms → cellular organisms → Bacteria → Proteobacteria	3883	Open in IMG/M
3300011419\|Ga0137446_1007370	All Organisms → cellular organisms → Bacteria	1995	Open in IMG/M
3300012096\|Ga0137389_10354710	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1248	Open in IMG/M
3300012133\|Ga0137329_1016685	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	843	Open in IMG/M
3300012174\|Ga0137338_1034170	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1042	Open in IMG/M
3300012189\|Ga0137388_11437572	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	628	Open in IMG/M
3300012361\|Ga0137360_10539876	All Organisms → cellular organisms → Bacteria → Proteobacteria	995	Open in IMG/M
3300012363\|Ga0137390_10516129	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1168	Open in IMG/M
3300012363\|Ga0137390_10776641	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	917	Open in IMG/M
3300012363\|Ga0137390_10909608	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	834	Open in IMG/M
3300012363\|Ga0137390_11720626	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	561	Open in IMG/M
3300012918\|Ga0137396_11000835	Not Available	605	Open in IMG/M
3300012986\|Ga0164304_10431164	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	945	Open in IMG/M
3300013104\|Ga0157370_10233489	All Organisms → cellular organisms → Bacteria → Proteobacteria	1702	Open in IMG/M
3300014326\|Ga0157380_11922178	Not Available	652	Open in IMG/M
3300014326\|Ga0157380_12475098	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	585	Open in IMG/M
3300017927\|Ga0187824_10049380	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1295	Open in IMG/M
3300018054\|Ga0184621_10292263	Not Available	576	Open in IMG/M
3300018060\|Ga0187765_10447954	Not Available	807	Open in IMG/M
3300018068\|Ga0184636_1092991	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1028	Open in IMG/M
3300018075\|Ga0184632_10265631	Not Available	747	Open in IMG/M
3300018084\|Ga0184629_10438375	Not Available	685	Open in IMG/M
3300018084\|Ga0184629_10486101	Not Available	644	Open in IMG/M
3300018422\|Ga0190265_13507177	Not Available	523	Open in IMG/M
3300019887\|Ga0193729_1218054	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	635	Open in IMG/M
3300020004\|Ga0193755_1206363	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	557	Open in IMG/M
3300020060\|Ga0193717_1189877	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	565	Open in IMG/M
3300020070\|Ga0206356_11211783	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	523	Open in IMG/M
3300020150\|Ga0187768_1045500	Not Available	971	Open in IMG/M
3300020580\|Ga0210403_11477208	Not Available	512	Open in IMG/M
3300020581\|Ga0210399_10024480	All Organisms → cellular organisms → Bacteria	4793	Open in IMG/M
3300021090\|Ga0210377_10582508	Not Available	633	Open in IMG/M
3300021403\|Ga0210397_11618915	Not Available	503	Open in IMG/M
3300021432\|Ga0210384_10006126	All Organisms → cellular organisms → Bacteria	12880	Open in IMG/M
3300021559\|Ga0210409_11439161	Not Available	565	Open in IMG/M
3300025321\|Ga0207656_10370660	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	717	Open in IMG/M
3300025912\|Ga0207707_11377975	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	563	Open in IMG/M
3300025913\|Ga0207695_10861225	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	786	Open in IMG/M
3300025938\|Ga0207704_11530058	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	573	Open in IMG/M
3300025971\|Ga0210102_1050367	Not Available	900	Open in IMG/M
3300025981\|Ga0207640_10001134	All Organisms → cellular organisms → Bacteria → Proteobacteria	14617	Open in IMG/M
3300026035\|Ga0207703_11486276	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	652	Open in IMG/M
3300026320\|Ga0209131_1228251	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	807	Open in IMG/M
3300026356\|Ga0257150_1057867	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	579	Open in IMG/M
3300026514\|Ga0257168_1003874	All Organisms → cellular organisms → Bacteria → Proteobacteria	2407	Open in IMG/M
3300026514\|Ga0257168_1108142	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	619	Open in IMG/M
3300026551\|Ga0209648_10100848	All Organisms → cellular organisms → Bacteria → Proteobacteria	2365	Open in IMG/M
3300027364\|Ga0209967_1071140	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	543	Open in IMG/M
3300027424\|Ga0209984_1061526	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	556	Open in IMG/M
3300027651\|Ga0209217_1045819	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1330	Open in IMG/M
3300027671\|Ga0209588_1173478	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	678	Open in IMG/M
3300027695\|Ga0209966_1023359	All Organisms → cellular organisms → Bacteria	1215	Open in IMG/M
3300027894\|Ga0209068_10018912	All Organisms → cellular organisms → Bacteria → Proteobacteria	3341	Open in IMG/M
3300028380\|Ga0268265_10092872	All Organisms → cellular organisms → Bacteria	2416	Open in IMG/M
3300028589\|Ga0247818_10739418	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	684	Open in IMG/M
3300028590\|Ga0247823_10793012	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	711	Open in IMG/M
3300028792\|Ga0307504_10041463	All Organisms → cellular organisms → Bacteria → Proteobacteria	1274	Open in IMG/M
3300028792\|Ga0307504_10168157	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	756	Open in IMG/M
3300028793\|Ga0307299_10349647	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M
3300028812\|Ga0247825_10153019	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1582	Open in IMG/M
3300028906\|Ga0308309_10029396	All Organisms → cellular organisms → Bacteria	3749	Open in IMG/M
3300030336\|Ga0247826_11140842	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	623	Open in IMG/M
3300031720\|Ga0307469_10012534	All Organisms → cellular organisms → Bacteria → Proteobacteria	4248	Open in IMG/M
3300031720\|Ga0307469_10141000	All Organisms → cellular organisms → Bacteria → Proteobacteria	1785	Open in IMG/M
3300031720\|Ga0307469_11445353	Not Available	657	Open in IMG/M
3300031820\|Ga0307473_10339560	All Organisms → cellular organisms → Bacteria	961	Open in IMG/M
3300031908\|Ga0310900_11783716	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	523	Open in IMG/M
3300031962\|Ga0307479_10088847	All Organisms → cellular organisms → Bacteria → Proteobacteria	2995	Open in IMG/M
3300032180\|Ga0307471_100109168	All Organisms → cellular organisms → Bacteria → Proteobacteria	2539	Open in IMG/M
3300032180\|Ga0307471_100307188	Not Available	1676	Open in IMG/M
3300032180\|Ga0307471_102808527	Not Available	618	Open in IMG/M
3300033550\|Ga0247829_10782221	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	795	Open in IMG/M
3300033551\|Ga0247830_10771602	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	764	Open in IMG/M
3300034818\|Ga0373950_0118000	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	585	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	76.64%
Host-Associated	Host-Associated	23.36%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	61.68%
Plants	Host-Associated → Plants	23.36%
Aquatic	Environmental → Aquatic	14.95%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	61.68%
Rhizoplane	Host-Associated → Plants → Rhizoplane	12.15%
Rhizosphere	Host-Associated → Plants → Rhizosphere	11.21%
Sediment	Environmental → Aquatic → Sediment	9.35%
Freshwater	Environmental → Aquatic → Freshwater	2.80%
Marine	Environmental → Aquatic → Marine	2.80%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	48.60%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	12.15%
Loam	Environmental → Terrestrial → Soil → Loam	10.28%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	9.35%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.48%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.74%
Wetlands	Environmental → Aquatic → Marine → Wetlands	2.80%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.87%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.87%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.93%
Sand	Environmental → Terrestrial → Soil → Sand	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.56%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	14.95%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	12.15%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	9.35%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	7.48%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.48%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.61%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.67%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.74%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.74%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	2.80%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.87%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.87%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.87%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.93%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.41%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.48%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	7.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	7.48%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	4.67%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	4.67%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	2.80%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	2.80%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.80%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.80%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.80%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	2.80%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.80%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.87%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.87%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.87%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.87%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.87%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.87%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.87%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.93%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.93%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.93%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.93%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.93%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.93%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.93%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.93%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.93%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.93%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.93%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090015	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
2170459005	Grass soil microbial communities from Rothamsted Park, UK - July 2009 direct MP BIO1O1 lysis 0-21cm	Environmental	Open in IMG/M
3300001228	Switchgrass rhizosphere microbial communities from Knoxville, Tennessee, USA - 12_joined	Host-Associated	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004052	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqC_D2	Environmental	Open in IMG/M
3300005183	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D1	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300009053	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009820	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_50_60	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011419	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT357_2	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012133	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT121_2	Environmental	Open in IMG/M
3300012174	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT366_2	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300017927	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018068	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_90_b2	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300020004	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2	Environmental	Open in IMG/M
3300020060	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2c2	Environmental	Open in IMG/M
3300020070	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020150	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_20_MG	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021090	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_b1 redo	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300025321	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025971	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqC_D2 (SPAdes)	Environmental	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental	Open in IMG/M
3300026356	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-A	Environmental	Open in IMG/M
3300026514	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-B	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027122	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G01A2-11 (SPAdes)	Environmental	Open in IMG/M
3300027364	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co AM (SPAdes)	Host-Associated	Open in IMG/M
3300027424	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027651	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027695	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes)	Host-Associated	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028589	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1	Environmental	Open in IMG/M
3300028590	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day30	Environmental	Open in IMG/M
3300028596	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glycerol_Day14	Environmental	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028812	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M
3300034818	Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPICI_02341530	2088090015	Soil	VVGYLYNRNIKDAANVWLRVDRVAPDGTVAGSYRRRVVGDVLSGGRSLFDVPVGEPTATYRVSVETLDWVKECR
E41_04477180	2170459005	Grass Soil	RVDRLGGDGAVAGTYRRRVVGDVLSGGRSLFDVPVGEAGATYQVSVETVDWVKECR
SwM_1406991	3300001228	Switchgrass Rhizosphere	LYNRNMKDGANVMLRVDRIGSDGAVTGTYRRRVVGDVLSGGRSVFDVPVADVGTYRVSVEAVDWVKECR*
JGIcombinedJ26739_1013045892	3300002245	Forest Soil	ARGRAHVVGYLYNTRIQDAANVWLRVDRVGADGAVAGTYRGRVVGDVLSGGRLFFDVPVGEAGASYQVSVDSVEWVKECR*
Ga0055490_101020272	3300004052	Natural And Restored Wetlands	RIGADGAVTATYRRRVVGDVLSGGRSLFEVPVGEPGANYRVAVETVDWVKECR*
Ga0068993_103595322	3300005183	Natural And Restored Wetlands	LYNDNYKDAANVWLRVDQLATDGVVASTYRRRVVGDVLSGGRSVFEVPVADARGRYRVTVETADWVKECR*
Ga0070676_100110882	3300005328	Miscanthus Rhizosphere	MTGPAGGYLRSEWAVEPAPGGRAHVVGYLYNRNIKDAANVWLRVDRVAPDGTVAGSYRRRVVGDVLSGGRSLFDVPVGEPTATYRVSVETLDWVKECR*
Ga0066388_1038437881	3300005332	Tropical Forest Soil	VWLRVDRVGPDGTVTGSYRRRVVGDVLSGNRSIFDVPVGEASATYRVSVETLDWVKECR*
Ga0070668_1006245052	3300005347	Switchgrass Rhizosphere	VVGYLYNRNIKDAANVWLRVDRVAPDGTVAGSYRRRVVGDVLSGGRSLFDVPVGEPTATYRVSVETLDWVKECR*
Ga0070688_1004461331	3300005365	Switchgrass Rhizosphere	VAPDGTVAGSYRRRVVGDVLSGGRSLFDVPVGEPTATYRVSVETLDWVKECR*
Ga0070700_1010507001	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	RAHVVGYLYNRNIKDAANVWLRVDRVAPDGTVAGSYRRRVVGDVLSGGRSLFDVPVGEPTATYRVSVETLDWVKECR*
Ga0070699_1010177652	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	VASSPHLRSEWSVEAPAAGRAHVVGYLYNSNINDAANVWLRVDRLGADGAVAGTYRRRVVGDVLSGGRSLFDVPVDEAAATYQVSVETVDWVKECR*
Ga0070679_1020879261	3300005530	Corn Rhizosphere	AEWTVEPTRTGRAQVVGYLHNSNIKDAANVWLRVDQLGADGAVAGSYRRRVVGDVLSGGRSVFAVPVADAGARYRVTVETADWVKECR*
Ga0070672_1017860062	3300005543	Miscanthus Rhizosphere	AANVWLRVDQLGADGAVAGSYRRRVVGDVLSGGRSVFAVPVADAGARYRVTVETADWVKECR*
Ga0068854_1000015591	3300005578	Corn Rhizosphere	DAANVWLRVDRVAPDGTVAGSYRRRVVGDVLSGGRSLFDVPVGEPTATYRVSVETLDWVKECR*
Ga0068858_1017378781	3300005842	Switchgrass Rhizosphere	DHGVPYADSLRAEWTVEPTRTGRAQVVGYLHNSNIKDAANVWLRVDQLGADGAVAGSYRRRVVGDVLSGGRSVFAVPVADAGARYRVTVETADWVKECR*
Ga0068860_1001783611	3300005843	Switchgrass Rhizosphere	LYNRNIKDAANVWLRVDRVAPDGTVAGSYRRRVVGDVLSGGRSLFDVPVGEPTATYRVSVETLDWVKECR*
Ga0070766_109658811	3300005921	Soil	VWSLRGPDGPTWWGIYNRNIKDAARVLMRVDRVGADGTVTGTYRARVVGDVFSRDRGLFDVPVPEATAIYRVSVEAVDWVKECR*
Ga0075018_100197561	3300006172	Watersheds	VDRLGADGAVAGTYRRRVVGDVLSGGRALFDVPVGEAGAAYQVSVEAVDWVKECR*
Ga0070765_1000126326	3300006176	Soil	VWSLRGPDGPTWWGIYNRNIKDAARVLMRVDRVGADGTVTGTYRARVVGDVFSRDRGLFDVPVLEATAIYRVSVEAVDWVKECR*
Ga0079222_124268461	3300006755	Agricultural Soil	VWLRVDRLGADGAVAATYRRRVVGDVFSGSRSLFEVPVPEAGATYRVTVEAADWIKECR*
Ga0075430_1015442352	3300006846	Populus Rhizosphere	RVAPDGTVAGSYRRRVVGDVLSGGRSLFDVPVGEPTATYRVSVETLDWVKECR*
Ga0075433_113017312	3300006852	Populus Rhizosphere	IMDGANVVLRVDRLGSDGAVTGTYRGRVVGDVLSGGRSLFDVPVAETGTYRVTVEAVDWVKECR*
Ga0068865_1016726311	3300006881	Miscanthus Rhizosphere	IKDAANVWLRVDRVAPDGTVAGSYRRRVVGDVLSGGRSLFDVPVGEPTATYRVSVETLDWVKECR*
Ga0105095_107651232	3300009053	Freshwater Sediment	YVPYADSLRPEWTVESTRAGRPQVVGYLHNSNIKDAANVWLRVDQLGADGAVASSYRRRVVGDVLSGGRSLFAVPVADAGADYRVAVETADWVKECR*
Ga0105240_104215782	3300009093	Corn Rhizosphere	AHVVGYLYNRNIKDAANVWLRVDRVAPDGTVAGSYRRRVVGDVLSGGRSLFDVPVGEPTATYRVSVETLDWVKECR*
Ga0114129_115277672	3300009147	Populus Rhizosphere	MDGANVLLRVDRLGSDGAVTGTYRGRVLGDVLSGGRSLFGVPVAETGTYRVTVEAVDWVKECR*
Ga0105085_11101331	3300009820	Groundwater Sand	ANVWLRVERVAADGSVSGTYRRRMVGDVLGGGRSVFDVPVGEAAATYRVTVETVDWVKECR*
Ga0126373_121165632	3300010048	Tropical Forest Soil	DRVGADGAVAASYRRRVVGDVFSGSRSLFEVPVPEAAATYRVTVEAADWVKECR*
Ga0126377_104257541	3300010362	Tropical Forest Soil	NVLLRVDRIGSDGAVIGTYRRRVVGDVLSGGRSLFDVPVAETGTYRVTVETVDWVKECR*
Ga0126379_112798842	3300010366	Tropical Forest Soil	AHLVGYLYNQNLNDAANVWLRAERVAQDGTVTGVYRSRVVGDVLSGNRLAFDVPVAEADATYVLHVEAVDWVKECR*
Ga0134127_100384256	3300010399	Terrestrial Soil	LRVDQLGADGAVAGSYRRRVVGDVLSGGRSLFAVPVGDAAARYRVTVETADWVKECR*
Ga0137446_10073704	3300011419	Soil	PYADSLRSEWTVELTRAGRAQVVGYLHNDNLKDAANVWLRVDQLGADGAVAGSYRRRVVGDVLSGGRSLFAVPVADAGGRYRVTVETADWVKECR*
Ga0137389_103547101	3300012096	Vadose Zone Soil	PHLRSEWSVEAPAAGRAHVVGDLYNSNIKDAANVWLRVDRLGADGAVAGTYRRRVVGDVLSGGRSLFDVPVGEAGATYQVSVETVDWVKECR*
Ga0137329_10166852	3300012133	Soil	YADSLRSEWTVGPTRAGRAQVVGYLHNDNIKDAANVWLRVDQLGADGAVAGSYRRRVVGDVLSGGRSLFAVPVADAGGRYRVTVETADWVKECR*
Ga0137338_10341701	3300012174	Soil	EWTVEPTRAGRAQVVGYLHNSNIKDAANVWLRVDQLGADGAVAGSYRRRVVGDVLSGGRSLFAVPVADAGARYRVTVETADWVKECR*
Ga0137388_114375722	3300012189	Vadose Zone Soil	YLYNSRVQDAANVWLRVDRLGADGAVAGTYRRRVVGDVLSGGRSLFDVPVGEAGATYQVSVETVDWVKECR*
Ga0137360_105398761	3300012361	Vadose Zone Soil	HVVGYLYNSNIKDAANVWLRVDRLGADGAVAGTYRRRVVGDVLSGGRSLFDVPVGEAAATYQVSVETVDWVKECR*
Ga0137390_105161291	3300012363	Vadose Zone Soil	AVPYADSLRSEWTVEPTGAGRAQVVGYLHNDNIKDAANVWLRVDQLGADGAVAGSYRRRVVGDVLSGGRSLFAVPVADAGARYRVTVETADWVKECR*
Ga0137390_107766411	3300012363	Vadose Zone Soil	AAGRAHVVGYLYNSNIKDAANVWLRVDRLGADGAVAGTYRRRVVGDVLSGGRSLFDVPVGEAGATYQVSVETVDWVKECR*
Ga0137390_109096082	3300012363	Vadose Zone Soil	AAGRAHVVGYLYNSNIKDAANVWLRVDRLGADGAVAGTYRRRVVGDVLSGGRSLFDVPVGEAAATYQVSVETVGWVKECR*
Ga0137390_117206262	3300012363	Vadose Zone Soil	AVPYADSLRSEWTVEPTGAGRAQVVGYLHNDNIKDAANVWLRVDQLGADGAVAGSYRRRVVGDVLSGGRSLFAVPVVDAGARYRVTVETADWVKECR*
Ga0137396_110008352	3300012918	Vadose Zone Soil	LHNSNIKDAANVWLRVDQLGADGAVAGSYRRRVVGDVLSGGRSLFAVPVADAGARYRVTVETADWVKECR*
Ga0164304_104311642	3300012986	Soil	WLRVDRVAPDGTVAGSYRRRVVGDVLSGGRSLFDVPVGEPTATYRVSVETLDWVKECR*
Ga0157370_102334891	3300013104	Corn Rhizosphere	GGYLRSEWAVEPAPGGRAHVVGYLYNRNIKDAANVWLRVDRVAPDGTVAGSYRRRVVGDVLSGGRSLFDVPVGEPTATYRVSVETLDWVKECR*
Ga0157380_119221781	3300014326	Switchgrass Rhizosphere	HNSNIKDAANVWLRVDQLGADGAVAGSYRRRVVGDVLSGGRSVFAVPVADAGARYRVTVETADWVKECR*
Ga0157380_124750982	3300014326	Switchgrass Rhizosphere	RVDRVAPDGTVAGSYRRRVVGDVLSGGRSLFDVPVGEPTATYRVSVETLDWVNECR*
Ga0187824_100493802	3300017927	Freshwater Sediment	SPLLQPEWTVEPARGGGAHVVGYLYNRNIKDAANVWLRVDRLGADGAVAGTYRRRVVGDVLSGNRSLFDVPVGEGGATYRVAVETVDWVKECR
Ga0184621_102922632	3300018054	Groundwater Sediment	AANVWLRVDQLGPDGAVAGSYRRRVVGDVLSGGRSVFAVPVADAGARYRVTVETADWVKECR
Ga0187765_104479542	3300018060	Tropical Peatland	GRAHVVGYLYNSNIKDAARVVMRVDRVAADGTVAGTYRAWVIGDVLSNDRGLFDVPVPEATATYRVSVEAVDLVKECR
Ga0184636_10929911	3300018068	Groundwater Sediment	LRSEWTVEPTRAGRAQVVGYLHNDNIKDAANVWLRVDQLGADGAVAGSYRRRVVGDVLSGGRSLFAVPVADAGARYRVTVETADWVKECR
Ga0184632_102656312	3300018075	Groundwater Sediment	GYLHNDNIKDAANVWLRVDQLGADGAVAGSYRRRVVGDVLSGGRSLFAVPVVDAGARYRVTVETADWVKECR
Ga0184629_104383752	3300018084	Groundwater Sediment	EWTVEPTRAGRAQVVGYLHNDNIKDAANVWLRVDQLGADGAVAGSYRRRVVGDVLSGGRSLFAVPVADAGARYRVTV
Ga0184629_104861012	3300018084	Groundwater Sediment	ANVRLRVDQLGADGAVAGSYRRRVVGDVLSGGRSLFAVPVADAGARYRVTVETADWVKEC
Ga0190265_135071771	3300018422	Soil	ANVWLRVDQLGADGAVTGRYRRRVVGDVPSGGRSVFAVPVADAGARYRVTVETADWVKEC
Ga0193729_12180542	3300019887	Soil	NVWLRVDRLGADGAVAGTYRRRVVGDVLSGGRSLFDVPVGEAGATYQVSVETVDWVKECR
Ga0193755_12063631	3300020004	Soil	PTRTGRAQVVGYLHNSNIKDAANVWLRVDQLGADGAVAGSYRRRVVGDVLSGGRSVFAVPVADAGARYRVTVETADWVKECR
Ga0193717_11898771	3300020060	Soil	EWTVEPTRAGRAQVVGYLHNDNIKDAANVWLRVDQLGADGAVAGSYRRRVVGDVLSGGRSLFAVPVADAGARYRVTVETADWVKECR
Ga0206356_112117832	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	RVAPDGTVAGSYRRRVVGDVLSGGRSLFDVPVGEPTATYRVSVETLDWVKECR
Ga0187768_10455002	3300020150	Tropical Peatland	GRAHVVGYLYNSNIKDAARVVMRVDRVAADGTVAGTYRAWVVGDVLSHDRGLFDVPVPEATATYRVSVEAVDWVKECR
Ga0210403_114772081	3300020580	Soil	GRAHVVGYLYNSNIKDAARVLMRVDRVGADGTVTGTYRARVVADVLSGDRGLFDVPVPEATATYRVGVEAVDWVKECR
Ga0210399_100244802	3300020581	Soil	VGFDAGALASAQTPGVQYPDSLRTEWSVVSTRAGRAHVVGYLYNSNIKDAARVLMRVDRVGADGTVTGTYRARVVADVLSGDRGLFDVPVPEATATYRVGVEAVDWVKECR
Ga0210377_105825081	3300021090	Groundwater Sediment	WLRVDQLGADGAVTGSYRRRVVGDVLSGGRSLFAVPVADAGGRYRVTVETADWVKECR
Ga0210397_116189152	3300021403	Soil	GPTWWGIYNSNIKDAARVLMRVDRVGADGTVTGTYRARVVGDVFSRDRGLFDVPVPEATAIYRVSVEAVDWVKECR
Ga0210384_100061267	3300021432	Soil	VWSLRGPDGPTWWGIYNSNIKDAARVLMRVDRVGADGTVTGTYRARVVGDVFSRDRGLFDVPVPEATAIYRVSVEAVDWVKECR
Ga0210409_114391612	3300021559	Soil	PDGPTWWGIYNSNIKDAARVLMRVDRVGADGTVTGTYRARVVGDVFSRDRGLFDVPVPEATAIYRVSVEAVDWVKECR
Ga0207656_103706602	3300025321	Corn Rhizosphere	RAHVVGYLYNRNIKDAANVWLRVDRVAPDGTVAGSYRRRVVGDVLSGGRSLFDVPVGEPTATYRVSVETLDWVKECR
Ga0207707_113779751	3300025912	Corn Rhizosphere	HGVPYADSLRAEWTVEPTRTGRAQVVGYLHNSNIKDAANVWLRVDQLGADGAVAGSYRRRVVGDVLSGGRSVFAVPVADAGARYRVTVETADWVKECR
Ga0207695_108612251	3300025913	Corn Rhizosphere	AHVVGYLYNRNIKDAANVWLRVDRVAPDGTVAGSYRRRVVGDVLSGGRSLFDVPVGEPTATYRVSVETLDWVKECR
Ga0207704_115300582	3300025938	Miscanthus Rhizosphere	IKDAANVWLRVDRVAPDGTVAGSYRRRVVGDVLSGGRSLFDVPVGEPTATYRVSVETLDWVKECR
Ga0210102_10503672	3300025971	Natural And Restored Wetlands	VERIGADGAVTATYRRRVVGDVLSGGRSLFEVPVGEPGANYRVAVETVDWVKECR
Ga0207640_100011341	3300025981	Corn Rhizosphere	KDAANVWLRVDRVAPDGTVAGSYRRRVVGDVLSGGRSLFDVPVGEPTATYRVSVETLDWVKECR
Ga0207703_114862761	3300026035	Switchgrass Rhizosphere	DHGVPYADSLRAEWTVEPTRTGRAQVVGYLHNSNIKDAANVWLRVDQLGADGAVAGSYRRRVVGDVLSGGRSVFAVPVADAGARYRVTVETADWVKECR
Ga0209131_12282511	3300026320	Grasslands Soil	PYLRSEWGVEARSAGRAHVVGYLYNSRVQDAANVWLRVDRLGADGAVAGTYRGRVVGDVLSGGRSLFDVPVGEAGATYQVSVETVDWVKECR
Ga0257150_10578672	3300026356	Soil	YNSRVQDAANVWLRVDRLGADGAVAGTYRRRVVGDVLSGGRSLFDVPVGEAGATYQVSVETVDWVKECR
Ga0257168_10038744	3300026514	Soil	VDRLDADGAVAGTYRRRVVGDVLSGGRSLFDVPVGEAGATYQVSVETVDWVKECR
Ga0257168_11081422	3300026514	Soil	APGRAHVVGYLYNSNIKDAANVWLRVDRLGADGAVAGTYRRRVVGDVLSGGRSLFDVPVGEAGATYQVSVETVDWVKECR
Ga0209648_101008484	3300026551	Grasslands Soil	HVVGYLYNSRVQDAANVWLRVDRLGGDGAVAGTYRRRVVGDVLSGGRSLFDVPVGEAGATYQVSVETVDWVKECR
Ga0207538_10005524	3300027122	Soil	RIGGDGAVTGTYRRRVVGDVLSGGRSLFDVPVADAGTYRVTVEAVDWVKECR
Ga0209967_10711401	3300027364	Arabidopsis Thaliana Rhizosphere	PGARARVVGYLYNDHIKDGANVMLRVDRIGGDGAVTGTYRRRVVGDVLSGGRSLFDVPVADAGTYRVTVEAVDWVKECR
Ga0209984_10615262	3300027424	Arabidopsis Thaliana Rhizosphere	GGRARVVGYLYNDHIKDGANVMLRVDRIGGDGAVTGTYRRRVVGDVLSGGRSLFDVPVADAGTYRVTVEAVDWVKECR
Ga0209217_10458192	3300027651	Forest Soil	RAHVVGYLYNTRIQDAANVWLRVDRVGADGAVAGTYRGRVVGDVLSGGRLFFDVPVGEAGASYQVSVDSVEWVKECR
Ga0209588_11734782	3300027671	Vadose Zone Soil	SVEAPAAGRAHVVGYLYNSNIKDAANVWLRVDRLGADGAVAGTYRRRVVGDVLSGGRSLFDVPVGEAGATYQVSVETVDWVKECR
Ga0209966_10233592	3300027695	Arabidopsis Thaliana Rhizosphere	HVVGYLYNRNIKDAANVWLRVDRVAPDGTVAGSYRRRVVGDVLSGGRSLFDVPVGEPTATYRVSVETLDWVKECR
Ga0209068_100189121	3300027894	Watersheds	IAHHVGAPAAGRAHVVGYLYNSNIKDAANVWLRVDRLGADGAVAGTYRRRVVGDVLSGGRALFDVPVGEAGAAYQVSVEAVDWVKECR
Ga0268265_100928724	3300028380	Switchgrass Rhizosphere	TGAAGGYMRSEWAVEPAPGGRAHVVGYLYNRSIKDAANVWLRVDRVAPDGTVAGSYRRRVVGDVLSGGRSLFDVPVGEPTATYRVSVETLDWVKECR
Ga0247818_107394182	3300028589	Soil	LYNRNIKDAANVWLRVDRVAPDGTVAGSYRRRVVGDVLSGGRSLFDVPVGEPTATYRVSVETLDWVKECR
Ga0247823_107930121	3300028590	Soil	YMRSEWAVEPAPGGRAHVVGYLYNRSIKDAANVWLRVDRVAPDGTVAGSYRRRVVGDVLSGGRSLFDVPVGEPTATYRVSVETLDWVKECR
Ga0247821_102490532	3300028596	Soil	VSHHAPDGTVAGSYRRRVVGDVLSGGRSLFDVPVGEPTATYRVSVETLDWVKECR
Ga0307504_100414631	3300028792	Soil	DSLWPEWTVEPTRTGRAQVVGYLHNSNIKDAANVWLRVDQLGADGAVAGSYRRRVVGDVLSGGRSMFAVPVADGGGRYRVTVDTVDWVKECR
Ga0307504_101681571	3300028792	Soil	VVGYLYNSRVQDAANVWLRVDRLGADGAVAGTYRRRVVGDVLSGGRSLFDVPVGEAGATYQVSVETVDWVKECR
Ga0307299_103496472	3300028793	Soil	ANVWLRVDQLGADGAVASSYRRRVVGDVLSGGRSLFAVPVADAGARYRVTVETADWVKEC
Ga0247825_101530191	3300028812	Soil	IHPQPHVGRAHVVGYLYNRNIKDAANVWLRVDRVAPDGTVAGSYRRRVVGDVLSGGRSLFDVPVGEPTATYRVSVETLDWVKECR
Ga0308309_100293962	3300028906	Soil	VWSLRGPDGPTWWGIYNRNIKDAARVLMRVDRVGADGTVTGTYRARVVGDVFSRDRGLFDVPVLEATAIYRVSVEAVDWVKECR
Ga0247826_111408421	3300030336	Soil	ADLRAHVVGYLYNRSIKDAANVWLRVDRVAPDGTVAGSYRRRVVGDVLSGGRSLFDVPVGEPTATYRVSVETLDWVKECR
Ga0307469_100125341	3300031720	Hardwood Forest Soil	SRIQDAANVWLRVDRLGADGAVAGTYRGRVVGDVLSGGRSLFDVPVGEAGATYQVSVETVDWVKECR
Ga0307469_101410003	3300031720	Hardwood Forest Soil	RVQDAANVWLRVDRLGADGAVAGTYRGRVVGDVLSGGRSLFDVPVGEAGATYQVSVEAVDWVNVCR
Ga0307469_114453532	3300031720	Hardwood Forest Soil	VWSLRGPDGPTWWGIYNRNIKDAARVLMRVDRVGADGTVTGTYRARVVGDVFSRDRGLFDVPVPEATAIYRVSVEAVDWVKECR
Ga0307473_103395601	3300031820	Hardwood Forest Soil	WNVESTRAGRAHVVGYLYNSNIKDAARVLMRVDRVGADGTVTGTYRARVVGEVLSRDRGIFDVPVPEATATYRVSVEAVDWVEECR
Ga0310900_117837161	3300031908	Soil	RSEWAVEPAPGGRAHVVGYLYNRNIKDAANVWLRVDRVAPDGTVAGSYRRRVVGDVLSGGRSLFDVPVGEPTATYRVSVETLDWVKECR
Ga0307479_100888472	3300031962	Hardwood Forest Soil	VWSLRGPDGPTWWGIYNRNIKDAARVLMRVDRVGADGTVTGTYRARVVGDVSSRDRGLFDVPVPEATAIYRVSVEAVDWVKECR
Ga0307471_1001091681	3300032180	Hardwood Forest Soil	DAANVWLRVDRLGADRAVAGTYRVRVVGDVLSGGRSLFDVPVGEAGATYQVSVETVDWVKECR
Ga0307471_1003071881	3300032180	Hardwood Forest Soil	RAEWTVEPTRTGRAQVVGYLHNSNIKDAANVWLRVDQLGADGAVAGSYRRRVVGDVLSGGRSVFAVPVADAGARYRVTVETADWVKECR
Ga0307471_1028085271	3300032180	Hardwood Forest Soil	PSGVWSLRGPDGPTWWGIYNRNIKDAARVLMRVDRVGADGTVTGTYRARVVGEVLSRDRGIFDVPVPEATATYRVSVEAVDWVEECR
Ga0247829_107822212	3300033550	Soil	PYADSLRAEWTVEPTRTGRAQVVGYLHNSNIKDAANVWLRVDQLGADGAVAGSYRRRVVGDVLSGGRSVFAVPVADAGARYRVTVETADWVKECR
Ga0247830_107716022	3300033551	Soil	PHVGRAHVVGYLYNRNIKDAANVWLRVDRVAPDGTVAGSYRRRVVGDVLSGGRSLFDVPVGEPTATYRVSVETLDWVKECR
Ga0373950_0118000_383_583	3300034818	Rhizosphere Soil	SIKDAANVWLRVDRVAPDGMVAGSYRRRVVGDVLSGGRSLFDVPVGEPTATYRVSVETLDWVKECR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F092669

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences