Metagenome Family F092620

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F092620
Family Type	Metagenome
Number of Sequences	107
Average Sequence Length	100 residues
Representative Sequence	VGIAADILGLRNHHFSSVAELLSALEQVCDAPVDKISARVFLAGAAADLVLTNVAAHAAEALSEQPTNRKTRRAASPSRRKNRRSVQGPPPRQRILFA
Number of Associated Samples	90
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	80.19 %
% of genes near scaffold ends (potentially truncated)	24.30 %
% of genes from short scaffolds (< 2000 bps)	73.83 %
Associated GOLD sequencing projects	83
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.49

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (79.439 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (22.430 % of family members)
Environment Ontology (ENVO)	Unclassified (28.972 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (58.879 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 47.62% β-sheet: 0.00% Coil/Unstructured: 52.38%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.49
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.49
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF00072	Response_reg	4.67
PF00994	MoCF_biosynth	3.74
PF03551	PadR	2.80
PF14332	DUF4388	1.87
PF13847	Methyltransf_31	1.87
PF12704	MacB_PCD	1.87
PF08530	PepX_C	1.87
PF04368	DUF507	0.93
PF16657	Malt_amylase_C	0.93
PF01740	STAS	0.93
PF13517	FG-GAP_3	0.93
PF04237	YjbR	0.93
PF09650	PHA_gran_rgn	0.93
PF13683	rve_3	0.93
PF05067	Mn_catalase	0.93
PF00069	Pkinase	0.93
PF01527	HTH_Tnp_1	0.93
PF01797	Y1_Tnp	0.93
PF01197	Ribosomal_L31	0.93
PF03544	TonB_C	0.93
PF13490	zf-HC2	0.93
PF01575	MaoC_dehydratas	0.93
PF02771	Acyl-CoA_dh_N	0.93
PF13545	HTH_Crp_2	0.93
PF11138	DUF2911	0.93
PF01636	APH	0.93
PF06983	3-dmu-9_3-mt	0.93
PF01713	Smr	0.93
PF00440	TetR_N	0.93
PF13561	adh_short_C2	0.93
PF08238	Sel1	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.74
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	2.80
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	2.80
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	2.80
COG2936	Predicted acyl esterase	General function prediction only [R]	1.87
COG0254	Ribosomal protein L31	Translation, ribosomal structure and biogenesis [J]	0.93
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	0.93
COG1943	REP element-mobilizing transposase RayT	Mobilome: prophages, transposons [X]	0.93
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	0.93
COG2315	Predicted DNA-binding protein with Ã¢â‚¬Ëœdouble-wingÃ¢â‚¬â„¢ structural motif, MmcQ/YjbR family	Transcription [K]	0.93
COG2764	Zn-dependent glyoxalase, PhnB family	Energy production and conversion [C]	0.93
COG3546	Mn-containing catalase (includes spore coat protein CotJC)	Inorganic ion transport and metabolism [P]	0.93
COG3865	Glyoxalase superfamily enzyme, possible 3-demethylubiquinone-9 3-methyltransferase	General function prediction only [R]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	79.44 %
Unclassified	root	N/A	20.56 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	79.44 %
Unclassified	root	N/A	20.56 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	79.44 %
Unclassified	root	N/A	20.56 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	58.88 %
Unclassified	root	N/A	20.56 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.87 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.93 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	46.73 %
Unclassified	root	N/A	20.56 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2.80 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.93 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	46.73 %
Unclassified	root	N/A	20.56 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1.87 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.93 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	46.73 %
Unclassified	root	N/A	20.56 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.87 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.93 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	46.73 %
Unclassified	root	N/A	20.56 %
Tistrella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Tistrella	0.93 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	0.93 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	0.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	46.73 %
Unclassified	root	N/A	20.56 %
Tistrella mobilis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Tistrella → Tistrella mobilis	0.93 %
Acidobacterium capsulatum	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium capsulatum	0.93 %
Leucobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Leucobacter	0.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	46.73 %
Unclassified	root	N/A	20.56 %
Leucobacter salsicius	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Leucobacter → Leucobacter salsicius	0.93 %
Tistrella mobilis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Tistrella → Tistrella mobilis	0.93 %
Acidobacterium capsulatum	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium capsulatum	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001593\|JGI12635J15846_10055142	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3007	Open in IMG/M
3300001990\|JGI24737J22298_10181543	Not Available	621	Open in IMG/M
3300004080\|Ga0062385_10228143	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1024	Open in IMG/M
3300004080\|Ga0062385_10540155	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	726	Open in IMG/M
3300004080\|Ga0062385_10641623	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	677	Open in IMG/M
3300004082\|Ga0062384_100028094	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2499	Open in IMG/M
3300004082\|Ga0062384_100125014	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1418	Open in IMG/M
3300004092\|Ga0062389_101095735	Not Available	982	Open in IMG/M
3300004092\|Ga0062389_102763229	Not Available	655	Open in IMG/M
3300004092\|Ga0062389_102903077	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	641	Open in IMG/M
3300004479\|Ga0062595_100132134	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1409	Open in IMG/M
3300004635\|Ga0062388_100156343	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1738	Open in IMG/M
3300005163\|Ga0066823_10130353	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	541	Open in IMG/M
3300005166\|Ga0066674_10066356	All Organisms → cellular organisms → Bacteria	1648	Open in IMG/M
3300005180\|Ga0066685_10349539	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1026	Open in IMG/M
3300005293\|Ga0065715_10522411	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	762	Open in IMG/M
3300005334\|Ga0068869_100797551	All Organisms → cellular organisms → Bacteria	811	Open in IMG/M
3300005367\|Ga0070667_101753905	Not Available	584	Open in IMG/M
3300005435\|Ga0070714_100765495	Not Available	934	Open in IMG/M
3300005440\|Ga0070705_100600839	Not Available	851	Open in IMG/M
3300005557\|Ga0066704_10909081	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Tistrella → Tistrella mobilis	544	Open in IMG/M
3300005610\|Ga0070763_10467244	All Organisms → cellular organisms → Bacteria	718	Open in IMG/M
3300005921\|Ga0070766_10679947	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	695	Open in IMG/M
3300006052\|Ga0075029_100179671	All Organisms → cellular organisms → Bacteria	1313	Open in IMG/M
3300006059\|Ga0075017_101573762	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Leucobacter → Leucobacter salsicius	518	Open in IMG/M
3300006086\|Ga0075019_10727800	Not Available	629	Open in IMG/M
3300006173\|Ga0070716_100204801	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1314	Open in IMG/M
3300006175\|Ga0070712_100064140	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2604	Open in IMG/M
3300006176\|Ga0070765_100292195	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1505	Open in IMG/M
3300006176\|Ga0070765_100444285	Not Available	1214	Open in IMG/M
3300006642\|Ga0075521_10521427	Not Available	583	Open in IMG/M
3300006806\|Ga0079220_12133862	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	502	Open in IMG/M
3300006871\|Ga0075434_102654359	Not Available	501	Open in IMG/M
3300006893\|Ga0073928_10008022	All Organisms → cellular organisms → Bacteria → Acidobacteria	13411	Open in IMG/M
3300006904\|Ga0075424_100959456	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	912	Open in IMG/M
3300007076\|Ga0075435_100633035	Not Available	928	Open in IMG/M
3300009012\|Ga0066710_100564608	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1723	Open in IMG/M
3300009098\|Ga0105245_10067060	Not Available	3250	Open in IMG/M
3300009101\|Ga0105247_10197220	Not Available	1351	Open in IMG/M
3300009137\|Ga0066709_100012808	All Organisms → cellular organisms → Bacteria → Acidobacteria	7850	Open in IMG/M
3300010360\|Ga0126372_10410257	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1240	Open in IMG/M
3300012685\|Ga0137397_10053263	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2908	Open in IMG/M
3300012929\|Ga0137404_11843798	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	563	Open in IMG/M
3300012957\|Ga0164303_10369273	All Organisms → cellular organisms → Bacteria	874	Open in IMG/M
3300012961\|Ga0164302_10199177	All Organisms → cellular organisms → Bacteria → Acidobacteria	1230	Open in IMG/M
3300013297\|Ga0157378_11906912	Not Available	643	Open in IMG/M
3300014151\|Ga0181539_1012178	All Organisms → cellular organisms → Bacteria → Proteobacteria	5533	Open in IMG/M
3300014166\|Ga0134079_10153667	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	930	Open in IMG/M
3300014495\|Ga0182015_10000971	All Organisms → cellular organisms → Bacteria → Acidobacteria	39590	Open in IMG/M
3300014501\|Ga0182024_10028721	All Organisms → cellular organisms → Bacteria → Acidobacteria	9652	Open in IMG/M
3300017822\|Ga0187802_10065742	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1340	Open in IMG/M
3300017924\|Ga0187820_1000467	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8929	Open in IMG/M
3300017928\|Ga0187806_1267685	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	595	Open in IMG/M
3300017930\|Ga0187825_10279942	All Organisms → cellular organisms → Bacteria	617	Open in IMG/M
3300017943\|Ga0187819_10226356	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1098	Open in IMG/M
3300017943\|Ga0187819_10244271	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1052	Open in IMG/M
3300017995\|Ga0187816_10551126	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	519	Open in IMG/M
3300018006\|Ga0187804_10478674	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	558	Open in IMG/M
3300018482\|Ga0066669_10083165	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2162	Open in IMG/M
3300019786\|Ga0182025_1089004	All Organisms → cellular organisms → Bacteria	1284	Open in IMG/M
3300019789\|Ga0137408_1134245	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium capsulatum	1908	Open in IMG/M
3300020579\|Ga0210407_10007325	All Organisms → cellular organisms → Bacteria	8340	Open in IMG/M
3300020579\|Ga0210407_10029309	All Organisms → cellular organisms → Bacteria	4089	Open in IMG/M
3300020579\|Ga0210407_10563776	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	889	Open in IMG/M
3300020579\|Ga0210407_10629859	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	835	Open in IMG/M
3300020580\|Ga0210403_10238389	All Organisms → cellular organisms → Bacteria → Acidobacteria	1493	Open in IMG/M
3300020583\|Ga0210401_10110279	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2583	Open in IMG/M
3300020583\|Ga0210401_10500312	Not Available	1078	Open in IMG/M
3300020583\|Ga0210401_10541006	All Organisms → cellular organisms → Bacteria	1027	Open in IMG/M
3300021170\|Ga0210400_10000237	All Organisms → cellular organisms → Bacteria	67489	Open in IMG/M
3300021178\|Ga0210408_10080613	All Organisms → cellular organisms → Bacteria	2551	Open in IMG/M
3300021401\|Ga0210393_10828576	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	752	Open in IMG/M
3300021407\|Ga0210383_10107714	Not Available	2349	Open in IMG/M
3300021432\|Ga0210384_10066845	All Organisms → cellular organisms → Bacteria	3240	Open in IMG/M
3300021432\|Ga0210384_11395905	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	605	Open in IMG/M
3300021478\|Ga0210402_10238683	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1677	Open in IMG/M
3300021559\|Ga0210409_11525039	Not Available	544	Open in IMG/M
3300022557\|Ga0212123_10008748	All Organisms → cellular organisms → Bacteria → Acidobacteria	15216	Open in IMG/M
3300024178\|Ga0247694_1006818	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1482	Open in IMG/M
3300024179\|Ga0247695_1045522	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	636	Open in IMG/M
3300024182\|Ga0247669_1010222	All Organisms → cellular organisms → Bacteria	1724	Open in IMG/M
3300024290\|Ga0247667_1010702	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1858	Open in IMG/M
3300024290\|Ga0247667_1080864	All Organisms → cellular organisms → Bacteria	598	Open in IMG/M
3300025474\|Ga0208479_1007036	All Organisms → cellular organisms → Bacteria	2401	Open in IMG/M
3300025899\|Ga0207642_10165472	Not Available	1191	Open in IMG/M
3300025933\|Ga0207706_10359274	Not Available	1265	Open in IMG/M
3300025939\|Ga0207665_10121965	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1842	Open in IMG/M
3300025939\|Ga0207665_10498899	All Organisms → cellular organisms → Bacteria	940	Open in IMG/M
3300026035\|Ga0207703_10669660	Not Available	985	Open in IMG/M
3300026377\|Ga0257171_1041609	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	791	Open in IMG/M
3300026481\|Ga0257155_1010471	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1235	Open in IMG/M
3300026498\|Ga0257156_1049549	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	864	Open in IMG/M
3300027660\|Ga0209736_1003154	All Organisms → cellular organisms → Bacteria	5492	Open in IMG/M
3300027701\|Ga0209447_10042054	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1263	Open in IMG/M
3300027768\|Ga0209772_10045807	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1296	Open in IMG/M
3300027829\|Ga0209773_10182889	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	876	Open in IMG/M
3300027898\|Ga0209067_10044288	All Organisms → cellular organisms → Bacteria → Acidobacteria	2267	Open in IMG/M
3300028047\|Ga0209526_10006343	All Organisms → cellular organisms → Bacteria → Acidobacteria	8097	Open in IMG/M
3300028906\|Ga0308309_10212686	Not Available	1600	Open in IMG/M
3300031057\|Ga0170834_104093380	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	526	Open in IMG/M
3300031708\|Ga0310686_103071641	All Organisms → cellular organisms → Bacteria → Acidobacteria	8324	Open in IMG/M
3300031718\|Ga0307474_10282609	All Organisms → cellular organisms → Bacteria	1276	Open in IMG/M
3300031718\|Ga0307474_10637001	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	841	Open in IMG/M
3300031720\|Ga0307469_10405016	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1166	Open in IMG/M
3300031823\|Ga0307478_10093411	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2318	Open in IMG/M
3300031962\|Ga0307479_10067045	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3462	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	87.85%
Host-Associated	Host-Associated	12.15%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	61.68%
Aquatic	Environmental → Aquatic	26.17%
Plants	Host-Associated → Plants	12.15%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	61.68%
Freshwater	Environmental → Aquatic → Freshwater	20.56%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.48%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.67%
Sediment	Environmental → Aquatic → Sediment	3.74%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	45.79%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	20.56%
Loam	Environmental → Terrestrial → Soil → Loam	13.08%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.61%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.74%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.74%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.80%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.87%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.87%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	28.04%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	12.15%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	8.41%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	8.41%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.48%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.61%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.61%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.61%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.74%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.74%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.80%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.87%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.87%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.87%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.87%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	22.43%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	11.21%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	8.41%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.67%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	4.67%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.67%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.80%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.80%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.80%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.80%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.80%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.87%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.87%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	1.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.87%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.93%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.93%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.93%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.93%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.93%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.93%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.93%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.93%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300001990	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3	Host-Associated	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005163	Soil and rhizosphere microbial communities from Laval, Canada - mgHMB	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006642	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014151	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_60_metaG	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017930	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019786	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (PacBio error correction)	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300024178	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK35	Environmental	Open in IMG/M
3300024179	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK36	Environmental	Open in IMG/M
3300024182	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK10	Environmental	Open in IMG/M
3300024290	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK08	Environmental	Open in IMG/M
3300025474	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-3 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026377	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-B	Environmental	Open in IMG/M
3300026481	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-19-A	Environmental	Open in IMG/M
3300026498	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-49-A	Environmental	Open in IMG/M
3300027660	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027701	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027768	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027829	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12635J15846_100551421	3300001593	Forest Soil	MGIAADILGLRNHHFSSVAELLSALDQVCDAPVDKITARVFLAGAAADLVLTNVAAHAAEALSEQSTNRKTRRTASRSRRKNHRSAQGLPPRQRILLG*
JGI24737J22298_101815432	3300001990	Corn Rhizosphere	MGIATDILGLRHHHLSSVAELLAALEQVRDAPVDKILARVFLVGEAADVVLTNVAAHAAEALSEQLPIRKARRVASASRRKNRRFDSGPLPRQR
Ga0062385_102281431	3300004080	Bog Forest Soil	IMGIAADILGLRNKHFSSVSELLAALDQVCDAPVDKISVRVFWASAAADQVLTNVAAHAAEALSELSEQPTSRRTRRTASPSRHKNRRSEQGLLPPRQRILFRIN*
Ga0062385_105401552	3300004080	Bog Forest Soil	HFSSVAELLYALDQVCDAPVDKITARVFLAGAAADLVLTNVAAHAEEAFSELQQPNRKTRRAVRSRRKYRRSVQGPPLQRILFAGGD*
Ga0062385_106416232	3300004080	Bog Forest Soil	IMGIAADILGLRNKHFSSVTELLAALEQVCDAPVDKVSAREYWARAAADQVLTNVAAHAAEALSEQPTNRRARRAASPSRRKNRRSEQGLLSPRQRILFRIN*
Ga0062384_1000280946	3300004082	Bog Forest Soil	MGIAADILALRDHHFSSVTELLAALEQVCDAPVDKIAARVFLASSAADLVLTNVAAHASEALSELQPTNPRTRRAASPSRRKTRRSDQGLQPRQRILFRIIDSSTASSSAPR*
Ga0062384_1001250142	3300004082	Bog Forest Soil	MGIAADILDLRDRHFSSVAELLYALDQVCDAPVDKITARVFLAGAAADLVLTNVAAHAEEAFSELQQPNRKTRRAVRSRRKYRRSVQGPPLQRILFAGGD*
Ga0062389_1010957351	3300004092	Bog Forest Soil	IAAEILGLRHKHFSSVAELLHALEQARYAPPIKRESRAFLAGAAADLVLTNVAAHAAEALMSEQPTNRRTRRAAWSSRRKSRRSEQGPTRQRMLFSIASSSAPR*
Ga0062389_1027632291	3300004092	Bog Forest Soil	FSSVTELLAALEQVCDAPVDKVSAREYWARAAADQVLTNVAAHAAEALSEQPTNRRARRAASPSRRKNRRSEQGLLSPRQRILFRIN*
Ga0062389_1029030772	3300004092	Bog Forest Soil	MGIVADILGLRNKHFSSVIELLAALEQVCDAPADKISARVFWASAAADNVLTNVAAHAAEALSELQQPTNRRTRRAASPSRRKN
Ga0062595_1001321342	3300004479	Soil	MGIAADILALREQHFSSVAELEAALDQVYEAPVDKISARVFLASAAADLVLTNVAAHAAEALNDITAARKTRRPSSSPRRNNRRSVQLPPSRQRILFAII*
Ga0062388_1001563437	3300004635	Bog Forest Soil	FSSVTELLAALEQVCDAPVDKIAARVFLASSAADLVLTNVAAHASEALSELQPTNPRTRRAASPSRRKTRRSDQGLQPRQRILFRIIDSSTASSSAPR*
Ga0066823_101303531	3300005163	Soil	MGIAADILGLRNNHFSSVTELLAALEQVCGAPVDKISARVFWASAAADQVLTNVAAHAAEALGEQPANRRTRRAASPSRRKNRRSEQSLPPRQRILFRTI*
Ga0066674_100663561	3300005166	Soil	MGIAADTLGLRDHHFSSVEELLSALDQVCDAPVDKIAARVFLASAAADLVLTNVAAHAAEALSEQPTNRRNRRTASPPRRKNRRSVQGLPPRQRVLFA*
Ga0066685_103495394	3300005180	Soil	MICCVQSEVKMMGIAADTLGLRDHHFSSVEELLSALDQVCDAPVDKIAARVFLASAAADLVLTNVAAHAAEALSEQPTNRRNRRTASPPRRKNRRSVQGLPPRQRVLFA*
Ga0065715_105224112	3300005293	Miscanthus Rhizosphere	MGIATDILGLRHHHLSSVAELLAALEQVRDAPVDKILARVFLVGEAADVVLTNVAAHAAEALSEQLPIRKARRVASASRRKNRRFDSGSLPRQRVLFA*
Ga0068869_1007975512	3300005334	Miscanthus Rhizosphere	MGIATDILGLRHHHLSSVAELLAALEQVRDAPVDKILARVFLVGEAADVVLTNVAAHAAEALSEQLPIRKARRVASASRRKNRRFDSGPLPRQRVLFA*
Ga0070667_1017539051	3300005367	Switchgrass Rhizosphere	PSLSLGTGERRDWNDMLCLIRGKNMGIATDILGLRHHHLSSVAELLAALEQVRDAPVDKILARVFLVGEAADVVLTNVAAHAAEALSEQLPIRKARRVASASRRKNRRFDSGPLPRQRVLFA*
Ga0070714_1007654952	3300005435	Agricultural Soil	MSIAADILALREHHLSSVTELLAALDQVYEAPVGKISARVFLAGAAADRVLTNVSAHAAEVMSDMTATPVTRRASSSPRRKNRRPIQAPGSRQRILFAII*
Ga0070705_1006008391	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MGIATDILGLRHHHLSSVAELLAALEQVRDAPVDKILARVFLVGEAADVVLTNVAAHAAEALSEQLPIRKARRVASASRHKNRRFDSGPLPRQRVLFA*
Ga0066704_109090811	3300005557	Soil	MGIAADILALRDHHFSSVAELLSALEQVCDAPVDKIASRVFLAGVAADLVLTNVAAHAAEALSGEPTNRRTRQAASSSRRKNRRPVKGLPPRQRILLA*
Ga0070763_104672442	3300005610	Soil	MGIAAEILGLRNRHFSSVSELMAALDQVSEAPVDKIPARVFMANAAADLVLTNVAAHAAEALNEQSTPRKTRRRAPATRRNNRRSVQTPSPRQRILFA*
Ga0070766_106799471	3300005921	Soil	MVCCAPSEVKIVGIAADILGLRNHHFSSVAQLLAALEQVCDAPVDKISARVFLAGAAANLVLTNVAAHAAEALSEQPTNRKTRRAASPSRRKNRRSVQG
Ga0075029_1001796712	3300006052	Watersheds	MGIAADILALRDHHFSSVAELLSALDQVCDAPPDKIIARVFLAGRAADLVLTNVAAYAAEALSEQTTNRKARRVASPSRRRNLRSVQDPLARQRLLLF*
Ga0075017_1015737621	3300006059	Watersheds	MGIAADILALRDHHFSSVAELLSALDQVCDAPPDKIIARVFLAGRAADLVLTNVAAYAAEALSEQTTNRKARRVASPSRRRN
Ga0075019_107278001	3300006086	Watersheds	MGIAADILELRTRHFSSVSELLAALDQVSEAPVDKIPARVFMANAAADLVLTNVAAHAAEALNEQSTPRKTRRRAPATRRNNRRSVQTPSPRQRILFA*
Ga0070716_1002048012	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MSIAADILALREHHLSSVTELLAALDQVYEAPVEKISARVFLAGAAADRVLTNVAAHAAEVMSDMTATPVTRRASSSPRRKNRRPIQAPGSRQRILFAII*
Ga0070712_1000641405	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MGIATDILGLRHHHLSSVAELLAALEQVRDAPVDKVLARVFLVGEAADVVLTNVAAHAAEALSEQLPIRKARRVASASRRKNRRFDSGPLPRQRVLFA*
Ga0070765_1002921954	3300006176	Soil	VCCDSSEVKIVGIAADILGLRNHHFSSVAQLLAALEQVCDAPVDKISARVFLAGAAADLVLTNVAAHAAEALSEEPTNRKTRRAASPSRRKNRRSVQDPSPRQRILFA*
Ga0070765_1004442852	3300006176	Soil	MGIAADILELRTRHFSSVSELMAALDQVSEAPVDKIPARVFMANAAADLVLTNVAAHAAEALNEQSTPRKTRRRAPATRRNNRRSVQTPSPRQRILFA*
Ga0075521_105214271	3300006642	Arctic Peat Soil	MGIAADILGLRNNHFSSVTELLAALEQVCGAPMDKISTRVFRASAAADQVLTNVAAHAAEALGEQPANRRTRRTASPSRRKNRRSEQ
Ga0079220_121338622	3300006806	Agricultural Soil	MGISSDVLGLRDHHFSSVAELLSALEQVCDAPVDKIAARVFLVGAAADLVLTNVAAHAAEALSELPTNSRTRRAASSSRRKNRRSDQG
Ga0075434_1026543592	3300006871	Populus Rhizosphere	MGIATDILGLRHHHLGSVAVLLAALEQVRDAPVDKISARVFLAGEAADVVLTNVAAHAAEALTEQLPIRKARRAASVSLRKNRRFDSGALPRQRVLF
Ga0073928_100080229	3300006893	Iron-Sulfur Acid Spring	VGIAADILGLRNHHFSSVAELLSALEQVCDAPVDKISARVFLAGAAADLVLTNVAAHAVEALSEEPTNRKTRRAASPSRRKNRRSVQGPPSRQRILFA*
Ga0075424_1009594561	3300006904	Populus Rhizosphere	MLCLIQGKNMGIATDILGLRHHHLGSVAVLLAALEQVRDAPVDKISARVFLAGEAADVVLTNVAAHAAEALTEQLPIRKARRAASVSLRKNRRFDSGALPRQRVLFA*
Ga0075435_1006330352	3300007076	Populus Rhizosphere	MGIATDILGLRHHHLGSVAVLLAALEQVRDAPVDKILARVFLAGEAADVVLTNVAAHAAEALTEQLPIRKARRAASVSLRKNRRFDSGALPRQRVLFA*
Ga0066710_1005646081	3300009012	Grasslands Soil	MGIAADILGLRNHHFSSVAELLSALDLVCDAPPNKIAARVFSAGAAADLVLTNVAAHAAEALSEQPMNRQTRRTASPSRRKNRRSVQALPSRQRVLFA
Ga0105245_100670606	3300009098	Miscanthus Rhizosphere	MLCLIRGKNMGIATDILGLRHHHLSSVAELLAALEQVRDAPVDKILARVFLVGEAADVVLTNVAAHAAEALSEQLPIRKARRVASASRRKNRRFDSGPLPRQRVLFA*
Ga0105247_101972202	3300009101	Switchgrass Rhizosphere	MGIATDILGLRHHHLSSVAELLAALEQVRDAPVDKILARVFLVGEAADVVLTNVAAHAAEALTQQLPIRKARRVASASRRKNRRFDSGPLPRQRVLFA*
Ga0066709_1000128084	3300009137	Grasslands Soil	MGIAADTLGLRDHHFSSVEELLSALHQVCDAPVDKIAARVFLASAAADLVLTNVAAHAAEALSEQPTNRRNRRTASPPRRKNRRSVQGLPPRQRVLFA*
Ga0126372_104102572	3300010360	Tropical Forest Soil	MGVAADILRLRNNHFSSVAELLAALEQVCDAPVDKISSRVFFAGAAADLVLTNVAAHAAEALGELATNRKTRRTVSPSRRKNRRSHLGQPPNQHILLTQADRRLLLLPLLR*
Ga0137397_100532633	3300012685	Vadose Zone Soil	MSIAADILGLRNKHFSSVAELLAALEQVAEAPVDKISPRVFLASAAADLVLTNVAAHAAEALSEQPTNRKTRRSASPSRRKNRRSDLGLLSRQRILFA*
Ga0137404_118437982	3300012929	Vadose Zone Soil	VGIAADILGLRNHHFSTVTELLAALEQVRDAPVDKIPARVFLAGAAADLVLTNVAAHTAEALSELPTNRITWRAASPSRRKNRRSVQGSPRQRILFA*
Ga0164303_103692731	3300012957	Soil	MGIATDILGLRHHHLSSVAELLAALEQVRDAPVDKILARVFLVSEAADVVLTNVAAHAAEALSETVPARTARRIGSASRRKNRRFDSGPLPRQRVLFA*
Ga0164302_101991772	3300012961	Soil	TGERRDWNDMLCLIRGKNMGIATDILGLRHHHLSSVAELLAALEQVRDAPVDKILARVFLVSEAADVVLTNVAAHAAEALSEQLPIRKARRVASASRRKNRRFDSGPLPRQRVLFA*
Ga0157378_119069121	3300013297	Miscanthus Rhizosphere	MGIATDILSLRHHHLGSVAELVAALEQVRDAPVDKILARVFLAGEAADVVLTNVAAHAAEALTQQLPIRKARRIALVSRRKNRRFDSGSLPRQRVLFA*
Ga0181539_10121784	3300014151	Bog	MGIARDILGLRNHHFSSVAELLAALEQVCDAPVDKISARVFWADAAADLVLTNVAAHAAEALSEQPTNRKIQRPASPSRRKNRRSVQGPPPRQRMWLA*
Ga0134079_101536671	3300014166	Grasslands Soil	CVQSEVRMMGIAADTLGLRDHHFSSVEELLSALDQVCDAPVDKIAARVFLASAAADLVLTNVAAHAAEALSEQPTNRRNRRTASPPRRKNRRSVQGLPPRQRVLFA*
Ga0182015_100009711	3300014495	Palsa	MGIAIDILGLRNQHFSSVAKLLSALELLHDAPVEKRSARVFLADEAADIVLTNVAAQAADALNDQTPVRKSGRTSSPSRRKNRHFDSGPSPRQRILFG*
Ga0182024_100287219	3300014501	Permafrost	MGIATDILGLRNQHFSSVANLLAALESIHDAPVDKIAARVFLAGEAADIVLTNVAAHAADALNDQTPPRKSRRSPSPSRRKSRHFDTGPSPRQRILFA*
Ga0187802_100657421	3300017822	Freshwater Sediment	MGIAADILGLRDHHFSSVAELLSALDQVCDAPLDKIEARVFLAGAAADLVLTNVAAHAAEALSDQPTNRKTRRAASSSRRKNRRSVQGPPPRQHILLA
Ga0187802_101018923	3300017822	Freshwater Sediment	QTEQLTSVSLFSHYTSVHLSFRTGARCNWDDMLCSIRGKNEAKIMGIAADILGLRDHHFSSVAELLSALDQVCEAPVDKIAARVFLAGAAADLVLTNVAAHAAEALSDQPTNRKTRRAVSPSRRKNRRSVQGPPPRQHILLA
Ga0187820_10004677	3300017924	Freshwater Sediment	MGIAADILGLREHHFSSVAELLSAIDQVYNAPVDKIAARVFLASAAADLVLTNVAAHAAEALSEQPANRKTRRAASQSRRKNRRSMQGLPPRQRILLA
Ga0187806_12676851	3300017928	Freshwater Sediment	KIMGIAADILGLRDHHFSSVAELLSALDQVCEAPVDKIAARVFLAGAAADLVLTNVAAHAAEALSDQPTNRKTRRAVSSSRRKNRRSDQGPPPRQHILLA
Ga0187825_102799422	3300017930	Freshwater Sediment	MGIAAEILGLRNNHFSSVVELLAALERVSDAPVEKITARVFVAGAAADRVLTNVAAHAADALSEQPTKRKTRRVASTSRRKNRRSDLRVLLGQRTLFA
Ga0187819_102263562	3300017943	Freshwater Sediment	MGIAADILGLRDHHFSSVAELLSALDQVCEAPVDKIAARVFLAGAAADLVLTNVAAHAAEALSDQPTNRKTRRAVSPSRRKNRRSVQGPPPRQHILLA
Ga0187819_102442711	3300017943	Freshwater Sediment	MGIAADILGLRDHHFSSVAELLSALDQVCDAPLDKIEARVFLASAAADLVLTNVAAHAAEALSDQPTNRKTRRAASSSRRKNRRSVQGPPPRQHILLA
Ga0187816_105511261	3300017995	Freshwater Sediment	MGIAADILGLRDHHFSSVAELLSALDQVCDAPLDKIEARVFLAGAAADLVLTNVAAHAAEALSDQPTNRKTRRAVSSSRRKNRRSVQGPPPRQHILLA
Ga0187804_104786741	3300018006	Freshwater Sediment	IGMICYAQSEVKIMGIASDILGLRDHHFSSVAELLAALDQVCEAPVDKISARVFLAGVAADLVLTNVAAHAAEALSEQPTNRKTRRAVSPTRRKNRRSVQGPPPRQHILFA
Ga0066669_100831652	3300018482	Grasslands Soil	MGIAADTLGLRDHHFSSVEELLSALDQVCDAPVDKIAARVFLASAAADLVLTNVAAHAAEALSEQPTNRRNRRTASPPRRKNRRSVQGLPPRQRVLFA
Ga0182025_10890041	3300019786	Permafrost	MGIAIDILGLRNQHFSSVAKLLSALELLHDAPVEKRSARVFLADEAADIVLTNVAAQAADALNDQTPVRKSGRTSSPSRRKNRHFDSGPSPRQRILFG
Ga0137408_11342451	3300019789	Vadose Zone Soil	MGIAADILALRDHHFSSVAELLSALEQVCDAPVDKIASRVFLAGVAADLVLTNVAAHAAEALSGEPTNRRTRQAASSSRRKNRRPVKGLPPRQRILLA
Ga0210407_100073259	3300020579	Soil	MGIAADLLALREHHFSSVAELQAALDLVYEAPVDKISARVFVAGAAADLVLTNVAAYAAEALSDMTATPKTRRAASSPRRKNRRSVQPPPSRQRILFAII
Ga0210407_100293093	3300020579	Soil	MGIAAEILGLRNHHFSSVAELLSALDQVCDAPVDKIAARVFLAGAAADLVLTNVAAHAAEALSELATNRKTRRTASASRRKNRRSVEGLPPRQRILFG
Ga0210407_105637761	3300020579	Soil	VGIAADILGLRNHHFSSVAELLSALEQVCDAPVDKISARVFLAGAAADLVLTNVAAHAAEALSEQPTNRKTRRAASPSRRKNRRSVQGPPSRQRILFA
Ga0210407_106298591	3300020579	Soil	MGIAADILGLRDHHFSSVAELLSALDQVCDAPVEKIAARVFLASAAADLVLTNVAAHAAEALSEQPTNRKTRRTASPSRRKNRRSVQGLPPRQRMLLA
Ga0210403_102383891	3300020580	Soil	VGIAADILGLRNHHFSSVAELLSALEQVCDAPVDKISARVFLAGAAADLVLTNVAAHAAEALSEQPTNRKTRRAASPSRRKNRRSVQGPPPRQRILFA
Ga0210401_101102792	3300020583	Soil	MGIAAEILGLRNRHFSSVSELMAALDRVSEALGDKIPARVFLANAAADLVLTNVAAHAAEALNEQTTPRKTRRRAPATRRNNRRSVQTPSPRQRILFA
Ga0210401_105003122	3300020583	Soil	MGIAADILHLRNRHFSSVSELMAALNQVSEAPVDKIPARVFLANAAADLVLTNVAAHAAEALNEQTTPRKTRRRAPAARRNNRRSVQTTSPRQRILFA
Ga0210401_105410062	3300020583	Soil	MGIAADILGLREHHFSSVAELLAALDQVCEAPVDKISARVFLAGVTADLVLTNVAAHAAEALSELTSNRKTRRSCSPARRKNRRSVQPTPPRQRILFATI
Ga0210400_1000023760	3300021170	Soil	MGIAADILGLRGHHFSSVAELLAALEQVCDAPVDKISARVFLATAAADLVLTNVAAHAAEALSEQPTNRKARRAASPSRRKNRRSDLGLLPRQRILFA
Ga0210408_100806131	3300021178	Soil	MGIASDILALREHHFSSVAELLAALEQVCEAPVDKISARVFLAGAAADLVLTNVAAHAAEAMSELATNRKTRRASSPSRRKNRRSVQPTPPRQRILFAII
Ga0210393_108285761	3300021401	Soil	MVCCAQSEVKIVGIAADILGLRNHHFSSVAELLSALEQVCDAPVDKISARVFLAGAAADLVLTNVAAHAAEALSEQPTNRKTRRAASPSRRKNRRSVQGPPPRQRILFA
Ga0210383_101077142	3300021407	Soil	MGIAADILHLRNRHFSSVSELMAALDQVSEAPVDKIPARVFLANAAADLVLTNVAAHAAEALNEQTTPRKTRRRAPATRRNNRRSVQTPSPRQRILFA
Ga0210384_100668453	3300021432	Soil	MGIASDILALREHHFSSVAELLAALEQVCEAPVDKISARVFLAGATADLVLTNVAAHAAEAMSELATNRKTRRASSPSRRKNRRSVQPTPPRQRILFAII
Ga0210384_113959052	3300021432	Soil	VGIAADILGLRNNHFSSVAELLAALEQVCDAPVDKISARVFLAGAAADLVLTNVAAHAAEALSEQPANRKTRRAASPSRRKNRRSVQAPPSRQRILFA
Ga0210402_102386833	3300021478	Soil	MGIAADILGLRDQHFSSVTELLAALEQVADAPIDKISARVFLANAAADLVLTNVAAHAAEALSEPATNRKTRRAASPPRRKNRRSDLALQPRQRILFA
Ga0210409_115250391	3300021559	Soil	MGIAADILHLRNRHFSSVSELMAALDQVSEAPVDKIPARVFLANAAADLVLTNVAAHAAEALNEQTTPRKTRRRAPAARRNNRRSVQTPSPRQRILFA
Ga0212123_1000874811	3300022557	Iron-Sulfur Acid Spring	VGIAADILGLRNHHFSSVAELLSALEQVCDAPVDKISARVFLAGAAADLVLTNVAAHAVEALSEEPTNRKTRRAASPSRRKNRRSVQGPPSRQRILFA
Ga0247694_10068181	3300024178	Soil	MGIPADILGLRAHHFSSVAELLAALEQVCDAPVDKISARVFLAGAAADLVLMNVAAHAAEALSEQPTNRKTRRADSSSRRKNCRSVQGPPPRQRILLA
Ga0247695_10455221	3300024179	Soil	IPADILGLRAHHFSSVAELLAALEQVCDAPVDKISARVFLAGAAADLVLMNVAAHAAEALSEQPTNRKTRRADSSSRRKNCRSVQGPPPRQRILLA
Ga0247669_10102222	3300024182	Soil	MGIAADILALREQHFSSVAELEAALDQVYEAPVDKISARVFLASAAADLVLTNVAAHAAEALNDITAARKTRRPSSSPRRNNRRSVQLPPSRQRILFAII
Ga0247667_10107022	3300024290	Soil	MGIPADILGLRNHHFSSVAELLAALEQVCDAPVDKISARVFLAGAAADLVLMNVAAHAAEALSEQPTNRKTRRADSSSRRKNCRSVQGPPPRQRILLA
Ga0247667_10808641	3300024290	Soil	MGIAADILALREQHFSSVAELEAALDQVYEAPVDKISARVFLASAAADLVLTNVAAHAAEALNDITAARKTRRPSSSPRRNNRRSVQLP
Ga0208479_10070363	3300025474	Arctic Peat Soil	MGIAADILGLRNNHFSSVTELLAALEQVCGAPVDKISARVFWASAAADQVLTNVAAHAAEALSEQPANRRTRRAASPSRRKNRRSEQGLPPHRRILFRII
Ga0207642_101654722	3300025899	Miscanthus Rhizosphere	MGIATDILGLRHHHLSSVAELLAALEQVRDAPVDKILARVFLVGEAADVVLTNVAAHAAEALSEQLPIRKARRVASASRRKNRRFDSGPLPRQRVLFA
Ga0207706_103592741	3300025933	Corn Rhizosphere	MSIATDILGLRHHHLSSVAELLAALEQVRDAPVDKILARVFLVGEAADVVLTNVAAHAAEALSEQLPIRKARRVASASRRKNRRFDSGPLPRQRVLFA
Ga0207665_101219653	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MLCQFEVRKMSIAADILALREHHLSSVTELLAALDQVYEAPVEKISARVFLAGAAADRVLTNVAAHAAEVMSDMTATPVTRRASSSPRRKNRRPIQAPGSRQRILFAII
Ga0207665_104988992	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MGIATDILGLRQHHLSSVAELLAALEQVRDAPVDKILARVFLAGEAADVVLTNVAAHAAEALSEQLPIRKARRVASASRRKNRRFDSGPLPRQRVLFA
Ga0207703_106696602	3300026035	Switchgrass Rhizosphere	MGIATDILGLRHHHLSSVAELLAALEQVRDAPVDKILARVFLVGEAADVVLTNVAAHAAEALSEQLPIRKARRVASASRRKNRRF
Ga0257171_10416091	3300026377	Soil	MGIAADILYLRDHHFSSVTELLAALEQVCDAPVDKISARVFLASAAADLVLTNVAAHAAEALSEEPTNRKTRRAAAPPRRKSRRSVQVPPPRQRILLA
Ga0257155_10104712	3300026481	Soil	MGVAADILALREHYFSSVAELLAALEQVCDAPVDKISARVFLAGAAADLVLTNVAAHAAEALSEQPNRKTQRAALPPRRRNRRSVQLPSPRQRILFA
Ga0257156_10495491	3300026498	Soil	RPFVQVQAVIGMICFAQCEVKIMGIAADILYLRDHHFSSVTELLAALEQVCDAPVDKISARVFLASAAADLVLTNVAAHAAEALSEEPTNRKTRRAAASPRRKSRRSVQVPPPRQRILLA
Ga0209736_10031541	3300027660	Forest Soil	MGIAADILGLRNHHFSSVAELLSALDQVCDAPVDKITARVFLAGAAADLVLTNVAAHAAEALSEQSTNRKTRRTASRSRRKNHRSAQGLPPRQRILLG
Ga0209447_100420542	3300027701	Bog Forest Soil	MSIAAEILGLRHKHFSSVAELLHALEQARYAPPIKREFRAFLAGAASDLVLTNVAAHAAEALSELQQPTNRKTRRAASPSRRKSRRSDPGPSRQRILFRTI
Ga0209772_100458071	3300027768	Bog Forest Soil	MGIAADILGLRNKHFSSVSELLAALDQVCDAPVDKISVRVFWASAAADQVLTNVAAHAAEALSELSEQPTSRRTRRTASPSRHKNRRSEQGLL
Ga0209773_101828892	3300027829	Bog Forest Soil	MGIAADILGLRNKHFSSVSELLAALDQVCDAPVDKISVRVFWASAAADQVLTNVAAHAAEALSELSEQPTSRRTRRTASPSRHKNRRSEQGLLPPRQRILFRIIDSSTASSSTPR
Ga0209067_100442881	3300027898	Watersheds	MGIAADILALRDHHFSSVAELLSALDQVCDAPPDKIIARVFLAGRAADLVLTNVAAYAAEALSEQTTNRKARRVASPSRRRNLRSVQDPLARQRLLLF
Ga0209526_100063435	3300028047	Forest Soil	MGIATDILALRNHHLSSVVELLAAIDQVHEAPVEKVSARVFLAGEAANKVLTNVAAHAAEALNERPPIRKSRQVASTSRRNIRRFDSGPLPHQRILFA
Ga0308309_102126863	3300028906	Soil	MGIAADILELRTRHFSSVSELMAALDQVSEAPVDKIPARVFMANAAADLVLTNVAAHAAEALNEQSTPRKTRRRAPATRRNNRRSVQTPSPRQRILFA
Ga0170834_1040933801	3300031057	Forest Soil	MVCCAQSEVKIVGIAADILGLRNHHFSSVAELLSALEQVCDAPVDKISARVFLAGAAADLVLTNVAAHAAEALSEQPTNRKTRRAASPSRRKNRRSVQGLPPRQRMLFA
Ga0310686_1030716418	3300031708	Soil	MGIAADILDLRHRHFSSVAELLSALEQVRNAPPWKIAAREFLASAAADLVLTNVAAHAEEAFSELQQPNRKTRRAVRSRRKYRRSVQGPPPQRILFAGGD
Ga0307474_102826091	3300031718	Hardwood Forest Soil	MGIAADILALREHHLSSVTELLAALDQVCEAPLDKISARVFLASAAADLVLTNVAAHAAEAMSELATNRKTRRPSSPSRRKNRRSVQ
Ga0307474_106370012	3300031718	Hardwood Forest Soil	MVCCAQSEVKIVGIAADILGLRNHHFSSVAELLSALEQVCDAPVDKISARVFLAGAAADLVLTNVAAHAAEALSEQPTNRKTRRAASPSRRKNRRSVQGPPSRQRILFA
Ga0307469_104050161	3300031720	Hardwood Forest Soil	MGIGADILGLRNHHFSSVAELLSALDQVCDAPPDKIAARVYSAGAAADLVLTNVAAHAAEALSEQPANRKTRRSPSPSRRKNRRSVQGLPPRQCILFA
Ga0307478_100934114	3300031823	Hardwood Forest Soil	VLDSEVKIVGIAADILGLRNHHFSSVAELLSALEQVCDAPVDKISARVFLAGAAADLVLTNVAAHAVEALSEEPTNRKTRRAASPSRRKNRRSVQGPPSRQRILFA
Ga0307479_100670451	3300031962	Hardwood Forest Soil	VGIAADILGLRNHYFSSVAELLAALEQVRDAPVDKISARVFLAGAAADLVLTNVAAHAVEALSEQSTNRKTRRAASPSRRKNRRSVQGPPPRQHMLFA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F092620

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences