NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F092606

Metagenome / Metatranscriptome Family F092606

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F092606
Family Type Metagenome / Metatranscriptome
Number of Sequences 107
Average Sequence Length 118 residues
Representative Sequence VMSTPHTDFEVDLIRDLRAIGAAEADAEAYVRGVRRGGVMVFATGSAEKADAAAEIMNHNCAVEIEELSASVPHLPSTVGDDVAPGRDSSVQAGRVRSPGAGARLFVW
Number of Associated Samples 88
Number of Associated Scaffolds 107

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 14.95 %
% of genes near scaffold ends (potentially truncated) 83.18 %
% of genes from short scaffolds (< 2000 bps) 77.57 %
Associated GOLD sequencing projects 84
AlphaFold2 3D model prediction Yes
3D model pTM-score0.44

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (69.159 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland
(27.103 % of family members)
Environment Ontology (ENVO) Unclassified
(72.897 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Water (non-saline)
(59.813 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 27.21%    β-sheet: 5.88%    Coil/Unstructured: 66.91%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.44
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 107 Family Scaffolds
PF11897DUF3417 7.48
PF02922CBM_48 4.67
PF05239PRC 3.74
PF04343DUF488 3.74
PF00479G6PD_N 2.80
PF02353CMAS 1.87
PF04366Ysc84 1.87
PF01238PMI_typeI_C 1.87
PF00871Acetate_kinase 1.87
PF02348CTP_transf_3 1.87
PF02878PGM_PMM_I 1.87
PF13419HAD_2 0.93
PF02781G6PD_C 0.93
PF16491Peptidase_M48_N 0.93
PF14720NiFe_hyd_SSU_C 0.93
PF12849PBP_like_2 0.93
PF03992ABM 0.93
PF14559TPR_19 0.93
PF09990DUF2231 0.93
PF09364XFP_N 0.93
PF06100MCRA 0.93
PF02879PGM_PMM_II 0.93
PF16326ABC_tran_CTD 0.93
PF11752DUF3309 0.93
PF05532CsbD 0.93
PF04041Glyco_hydro_130 0.93
PF02502LacAB_rpiB 0.93

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 107 Family Scaffolds
COG0364Glucose-6-phosphate 1-dehydrogenaseCarbohydrate transport and metabolism [G] 3.74
COG3189Uncharacterized conserved protein YeaO, DUF488 familyFunction unknown [S] 3.74
COG0033Phosphoglucomutase/phosphomannomutaseCarbohydrate transport and metabolism [G] 2.80
COG1109PhosphomannomutaseCarbohydrate transport and metabolism [G] 2.80
COG0282Acetate kinaseEnergy production and conversion [C] 1.87
COG1083CMP-N-acetylneuraminic acid synthetase, NeuA/PseF familyCell wall/membrane/envelope biogenesis [M] 1.87
COG1212CMP-2-keto-3-deoxyoctulosonic acid synthetaseCell wall/membrane/envelope biogenesis [M] 1.87
COG1482Mannose-6-phosphate isomerase, class ICarbohydrate transport and metabolism [G] 1.87
COG1861Spore coat polysaccharide biosynthesis protein SpsF, cytidylyltransferase familyCell wall/membrane/envelope biogenesis [M] 1.87
COG3426Butyrate kinaseEnergy production and conversion [C] 1.87
COG2226Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenGCoenzyme transport and metabolism [H] 1.87
COG22272-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylaseCoenzyme transport and metabolism [H] 1.87
COG2230Cyclopropane fatty-acyl-phospholipid synthase and related methyltransferasesLipid transport and metabolism [I] 1.87
COG2930Lipid-binding SYLF domain, Ysc84/FYVE familyLipid transport and metabolism [I] 1.87
COG4716Myosin-crossreactive antigen (function unknown)Function unknown [S] 0.93
COG3237Uncharacterized conserved protein YjbJ, UPF0337 familyFunction unknown [S] 0.93
COG2152Predicted glycosyl hydrolase, GH43/DUF377 familyCarbohydrate transport and metabolism [G] 0.93
COG0698Ribose 5-phosphate isomerase RpiBCarbohydrate transport and metabolism [G] 0.93

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms69.16 %
UnclassifiedrootN/A30.84 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001417|JGI20196J14858_1024288Not Available518Open in IMG/M
3300003369|JGI24140J50213_10046114All Organisms → cellular organisms → Bacteria1559Open in IMG/M
3300005336|Ga0070680_100638695All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia914Open in IMG/M
3300005337|Ga0070682_101775163All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia538Open in IMG/M
3300005541|Ga0070733_10197462All Organisms → cellular organisms → Bacteria → Acidobacteria1315Open in IMG/M
3300006173|Ga0070716_100320470All Organisms → cellular organisms → Bacteria1086Open in IMG/M
3300006640|Ga0075527_10117188Not Available742Open in IMG/M
3300006642|Ga0075521_10472167All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus613Open in IMG/M
3300006795|Ga0075520_1173756Not Available927Open in IMG/M
3300009518|Ga0116128_1060766All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Telmatospirillum → Telmatospirillum siberiense1171Open in IMG/M
3300009519|Ga0116108_1007011All Organisms → cellular organisms → Bacteria4575Open in IMG/M
3300009519|Ga0116108_1015900All Organisms → cellular organisms → Bacteria2670Open in IMG/M
3300009547|Ga0116136_1000263All Organisms → cellular organisms → Bacteria35187Open in IMG/M
3300009616|Ga0116111_1159815Not Available531Open in IMG/M
3300009617|Ga0116123_1123752All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae677Open in IMG/M
3300009624|Ga0116105_1002117All Organisms → cellular organisms → Bacteria → Acidobacteria4376Open in IMG/M
3300009637|Ga0116118_1138798All Organisms → cellular organisms → Bacteria792Open in IMG/M
3300009640|Ga0116126_1008690All Organisms → cellular organisms → Bacteria4952Open in IMG/M
3300009643|Ga0116110_1024816All Organisms → cellular organisms → Bacteria2289Open in IMG/M
3300009644|Ga0116121_1129436Not Available795Open in IMG/M
3300009645|Ga0116106_1037850All Organisms → cellular organisms → Bacteria1639Open in IMG/M
3300009645|Ga0116106_1258733Not Available554Open in IMG/M
3300009646|Ga0116132_1214718Not Available584Open in IMG/M
3300009760|Ga0116131_1038206Not Available1609Open in IMG/M
3300009762|Ga0116130_1137276All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae770Open in IMG/M
3300009764|Ga0116134_1001915All Organisms → cellular organisms → Bacteria10347Open in IMG/M
3300009764|Ga0116134_1143248All Organisms → cellular organisms → Bacteria846Open in IMG/M
3300009764|Ga0116134_1299702Not Available553Open in IMG/M
3300010341|Ga0074045_10005829All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae10682Open in IMG/M
3300010341|Ga0074045_10016316All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae5962Open in IMG/M
3300010343|Ga0074044_10022061All Organisms → cellular organisms → Bacteria4587Open in IMG/M
3300010371|Ga0134125_10510110All Organisms → cellular organisms → Bacteria1332Open in IMG/M
3300010371|Ga0134125_10841820All Organisms → cellular organisms → Bacteria → Acidobacteria1008Open in IMG/M
3300010373|Ga0134128_10268481All Organisms → cellular organisms → Bacteria1913Open in IMG/M
3300010373|Ga0134128_13185008Not Available504Open in IMG/M
3300010396|Ga0134126_10638877Not Available1214Open in IMG/M
3300010396|Ga0134126_11512961Not Available740Open in IMG/M
3300013100|Ga0157373_11129138Not Available589Open in IMG/M
3300014151|Ga0181539_1000552All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae44821Open in IMG/M
3300014151|Ga0181539_1198022All Organisms → cellular organisms → Bacteria773Open in IMG/M
3300014151|Ga0181539_1218991All Organisms → cellular organisms → Bacteria723Open in IMG/M
3300014152|Ga0181533_1127533All Organisms → cellular organisms → Bacteria1077Open in IMG/M
3300014155|Ga0181524_10211477All Organisms → cellular organisms → Bacteria940Open in IMG/M
3300014155|Ga0181524_10339617All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium GWE2_37_16672Open in IMG/M
3300014158|Ga0181521_10011163All Organisms → cellular organisms → Bacteria → Acidobacteria8656Open in IMG/M
3300014164|Ga0181532_10288552Not Available932Open in IMG/M
3300014164|Ga0181532_10399663All Organisms → cellular organisms → Bacteria763Open in IMG/M
3300014164|Ga0181532_10667560All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium561Open in IMG/M
3300014165|Ga0181523_10461403All Organisms → cellular organisms → Bacteria704Open in IMG/M
3300014200|Ga0181526_10448671All Organisms → cellular organisms → Bacteria → Proteobacteria → Acidithiobacillia → Acidithiobacillales → Thermithiobacillaceae → Thermithiobacillus → Thermithiobacillus tepidarius818Open in IMG/M
3300014491|Ga0182014_10038953All Organisms → cellular organisms → Bacteria3477Open in IMG/M
3300014495|Ga0182015_10288549All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium1075Open in IMG/M
3300014499|Ga0182012_10292684Not Available1101Open in IMG/M
3300014838|Ga0182030_10769654All Organisms → cellular organisms → Bacteria → Acidobacteria887Open in IMG/M
3300017925|Ga0187856_1046202All Organisms → cellular organisms → Bacteria → Proteobacteria1940Open in IMG/M
3300017925|Ga0187856_1292167Not Available563Open in IMG/M
3300017931|Ga0187877_1008824All Organisms → cellular organisms → Bacteria → Acidobacteria6591Open in IMG/M
3300017935|Ga0187848_10411163All Organisms → cellular organisms → Bacteria557Open in IMG/M
3300017946|Ga0187879_10003370All Organisms → cellular organisms → Bacteria10772Open in IMG/M
3300017946|Ga0187879_10013902All Organisms → cellular organisms → Bacteria → Acidobacteria5055Open in IMG/M
3300017946|Ga0187879_10073748All Organisms → cellular organisms → Bacteria1979Open in IMG/M
3300017996|Ga0187891_1035646All Organisms → cellular organisms → Bacteria2193Open in IMG/M
3300018002|Ga0187868_1068069All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1461Open in IMG/M
3300018005|Ga0187878_1252706All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae641Open in IMG/M
3300018008|Ga0187888_1331980All Organisms → cellular organisms → Bacteria → Acidobacteria580Open in IMG/M
3300018009|Ga0187884_10150218All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Telmatospirillum → Telmatospirillum siberiense982Open in IMG/M
3300018013|Ga0187873_1275434Not Available620Open in IMG/M
3300018014|Ga0187860_1212621All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum786Open in IMG/M
3300018016|Ga0187880_1008542All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis6955Open in IMG/M
3300018017|Ga0187872_10107047All Organisms → cellular organisms → Bacteria1390Open in IMG/M
3300018021|Ga0187882_1108118All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1177Open in IMG/M
3300018022|Ga0187864_10119557All Organisms → cellular organisms → Bacteria1343Open in IMG/M
3300018023|Ga0187889_10354824Not Available640Open in IMG/M
3300018025|Ga0187885_10077346All Organisms → cellular organisms → Bacteria1648Open in IMG/M
3300018025|Ga0187885_10151903All Organisms → cellular organisms → Bacteria1095Open in IMG/M
3300018037|Ga0187883_10010511All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae5258Open in IMG/M
3300018037|Ga0187883_10694983All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum531Open in IMG/M
3300018038|Ga0187855_10373647All Organisms → cellular organisms → Bacteria → Acidobacteria831Open in IMG/M
3300018040|Ga0187862_10106634All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1934Open in IMG/M
3300018046|Ga0187851_10442213Not Available741Open in IMG/M
3300018047|Ga0187859_10035041All Organisms → cellular organisms → Bacteria2703Open in IMG/M
3300018057|Ga0187858_10367129All Organisms → cellular organisms → Bacteria900Open in IMG/M
3300019082|Ga0187852_1436213All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum508Open in IMG/M
3300020069|Ga0197907_10545836Not Available700Open in IMG/M
3300020070|Ga0206356_11457373All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum501Open in IMG/M
3300020078|Ga0206352_10340126Not Available699Open in IMG/M
3300023090|Ga0224558_1087110All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia1127Open in IMG/M
3300025464|Ga0208076_1041752Not Available800Open in IMG/M
3300025480|Ga0208688_1080203All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae649Open in IMG/M
3300025496|Ga0208191_1129281Not Available502Open in IMG/M
3300025500|Ga0208686_1117308Not Available554Open in IMG/M
3300025553|Ga0208080_1035871All Organisms → cellular organisms → Bacteria1432Open in IMG/M
3300025612|Ga0208691_1105959Not Available633Open in IMG/M
3300025878|Ga0209584_10311174Not Available606Open in IMG/M
3300025888|Ga0209540_10340605All Organisms → cellular organisms → Bacteria838Open in IMG/M
3300026116|Ga0207674_11537956All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae634Open in IMG/M
3300027867|Ga0209167_10164543Not Available1170Open in IMG/M
3300028798|Ga0302222_10349357Not Available577Open in IMG/M
3300028860|Ga0302199_1075534Not Available1120Open in IMG/M
3300028866|Ga0302278_10057386All Organisms → cellular organisms → Bacteria2377Open in IMG/M
3300028882|Ga0302154_10238316Not Available911Open in IMG/M
3300029817|Ga0247275_1006946All Organisms → cellular organisms → Bacteria → Acidobacteria4928Open in IMG/M
3300029817|Ga0247275_1179576Not Available520Open in IMG/M
3300029915|Ga0311358_10379304All Organisms → cellular organisms → Bacteria1154Open in IMG/M
3300031040|Ga0265754_1025833Not Available577Open in IMG/M
3300033402|Ga0326728_10055727All Organisms → cellular organisms → Bacteria → Proteobacteria5617Open in IMG/M
3300033818|Ga0334804_011673Not Available3423Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland27.10%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland21.50%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog11.21%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil8.41%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil5.61%
BogEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Bog3.74%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere2.80%
Bog Forest SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil2.80%
BogEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Bog2.80%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.87%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil1.87%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere1.87%
SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Soil1.87%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.93%
PalsaEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa0.93%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere0.93%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa0.93%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil0.93%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.93%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.93%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001417Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 shallow-092012EnvironmentalOpen in IMG/M
3300003369Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 002-22AEnvironmentalOpen in IMG/M
3300005336Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaGEnvironmentalOpen in IMG/M
3300005337Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaGEnvironmentalOpen in IMG/M
3300005541Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1EnvironmentalOpen in IMG/M
3300006173Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaGEnvironmentalOpen in IMG/M
3300006640Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost305-11BEnvironmentalOpen in IMG/M
3300006642Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-DEnvironmentalOpen in IMG/M
3300006795Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-BEnvironmentalOpen in IMG/M
3300009518Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_150EnvironmentalOpen in IMG/M
3300009519Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_150EnvironmentalOpen in IMG/M
3300009547Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_40EnvironmentalOpen in IMG/M
3300009616Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_100EnvironmentalOpen in IMG/M
3300009617Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_100EnvironmentalOpen in IMG/M
3300009624Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10EnvironmentalOpen in IMG/M
3300009637Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_40EnvironmentalOpen in IMG/M
3300009640Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_40EnvironmentalOpen in IMG/M
3300009643Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_40EnvironmentalOpen in IMG/M
3300009644Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_10EnvironmentalOpen in IMG/M
3300009645Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40EnvironmentalOpen in IMG/M
3300009646Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_150EnvironmentalOpen in IMG/M
3300009760Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_100EnvironmentalOpen in IMG/M
3300009762Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_40EnvironmentalOpen in IMG/M
3300009764Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40EnvironmentalOpen in IMG/M
3300010341Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2EnvironmentalOpen in IMG/M
3300010343Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1EnvironmentalOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010396Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2EnvironmentalOpen in IMG/M
3300013100Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaGHost-AssociatedOpen in IMG/M
3300014151Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_60_metaGEnvironmentalOpen in IMG/M
3300014152Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_60_metaGEnvironmentalOpen in IMG/M
3300014155Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_60_metaGEnvironmentalOpen in IMG/M
3300014158Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaGEnvironmentalOpen in IMG/M
3300014164Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaGEnvironmentalOpen in IMG/M
3300014165Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaGEnvironmentalOpen in IMG/M
3300014200Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaGEnvironmentalOpen in IMG/M
3300014491Permafrost microbial communities from Stordalen Mire, Sweden - 612S2D metaGEnvironmentalOpen in IMG/M
3300014495Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaGEnvironmentalOpen in IMG/M
3300014499Permafrost microbial communities from Stordalen Mire, Sweden - 612S2S metaGEnvironmentalOpen in IMG/M
3300014838Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300017925Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_40EnvironmentalOpen in IMG/M
3300017931Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_100EnvironmentalOpen in IMG/M
3300017935Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40EnvironmentalOpen in IMG/M
3300017946Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10EnvironmentalOpen in IMG/M
3300017996Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_40EnvironmentalOpen in IMG/M
3300018002Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_40EnvironmentalOpen in IMG/M
3300018005Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_150EnvironmentalOpen in IMG/M
3300018008Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_40EnvironmentalOpen in IMG/M
3300018009Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40EnvironmentalOpen in IMG/M
3300018013Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_100EnvironmentalOpen in IMG/M
3300018014Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_40EnvironmentalOpen in IMG/M
3300018016Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_40EnvironmentalOpen in IMG/M
3300018017Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_40EnvironmentalOpen in IMG/M
3300018021Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_150EnvironmentalOpen in IMG/M
3300018022Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_40EnvironmentalOpen in IMG/M
3300018023Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_100EnvironmentalOpen in IMG/M
3300018025Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_100EnvironmentalOpen in IMG/M
3300018037Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10EnvironmentalOpen in IMG/M
3300018038Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10EnvironmentalOpen in IMG/M
3300018040Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150EnvironmentalOpen in IMG/M
3300018046Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10EnvironmentalOpen in IMG/M
3300018047Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10EnvironmentalOpen in IMG/M
3300018057Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150EnvironmentalOpen in IMG/M
3300019082Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_40EnvironmentalOpen in IMG/M
3300020069Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300020070Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300020078Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300023090Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 20-24EnvironmentalOpen in IMG/M
3300025464Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 shallow-072012 (SPAdes)EnvironmentalOpen in IMG/M
3300025480Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_150 (SPAdes)EnvironmentalOpen in IMG/M
3300025496Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_40 (SPAdes)EnvironmentalOpen in IMG/M
3300025500Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40 (SPAdes)EnvironmentalOpen in IMG/M
3300025553Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 deep-092012 (SPAdes)EnvironmentalOpen in IMG/M
3300025612Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10 (SPAdes)EnvironmentalOpen in IMG/M
3300025878Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D (SPAdes)EnvironmentalOpen in IMG/M
3300025888Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 011-21A (SPAdes)EnvironmentalOpen in IMG/M
3300026116Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027867Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300028798Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_2EnvironmentalOpen in IMG/M
3300028860Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N2_3EnvironmentalOpen in IMG/M
3300028866Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N3_2EnvironmentalOpen in IMG/M
3300028882Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N2_3EnvironmentalOpen in IMG/M
3300029817Soil microbial communities from Marcell Experimental Forest, Minnesota, USA - Bog25EnvironmentalOpen in IMG/M
3300029915III_Bog_E1 coassemblyEnvironmentalOpen in IMG/M
3300031040Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE6 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300033402Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MNEnvironmentalOpen in IMG/M
3300033818Peat soil microbial communities from Stordalen Mire, Sweden - 713 S-3-MEnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI20196J14858_102428813300001417Arctic Peat SoilKQIHLVEDEMAKTAVGLFENRSSVDEVVRDLEASGFLGKEVRVLSEPPDMADNGLLSTPHTDFEVGLMRELRAIGAAEVDAAAYVDGVRHGSVMVFATGPGEKADAAVAIMNRHCAVESEELNASVPHLPSTHQDDTAASRDGSVEAGRFRSPGAGARLFVW*
JGI24140J50213_1004611413300003369Arctic Peat SoilMAKTAVGLFENRSSVDEVVRDLEASGFLGKEVRVLSEPPDMADNGLLSTPHTDFEVGLMRELRAIGAAEVDAAAYVDGVRHGSVMVFATGPGEKADAAVAIMNRHCAVESEELNASVPHLPSTHQDDTAASRDGSVEAGRFRSPGAGARLFVW*
Ga0070680_10063869513300005336Corn RhizosphereMMSIPHTDFEVDLVRELRTVGAAEADAEAYVKGVRHGGVIIFASGSDEKVDAAAEIMNRHSAVELEELGASEPHLQSSLTPARSSSGQTGRIRSCGGGARLFVW*
Ga0070682_10177516313300005337Corn RhizosphereTDFEVDLVRELRTVGAAEADAEAYVKGVRDGGVIIFASGSDEKVEAAAEIMNRHSAVELEELGASEPHLQSSLTPARSSSGQTGRIRSCGGGARLFVW*
Ga0070733_1019746233300005541Surface SoilMELFTTFMAGSGTMSIPHTDFEVDFIRELRTAGAAEADAEAYVKGLRGGGVIVFASGSDEKVDAAAEIMNRHCAVELEELRALEPHLHSSMTPGRSSSGQTGRIRSSGGGARLFVW*
Ga0070716_10032047013300006173Corn, Switchgrass And Miscanthus RhizosphereREIAGSGTMSTPHTDFEVDLVRELRTIGAAEGDAEAYVQGVRRGGVIVFATGSSEKAEAAAEIMNRHRALEIEELSASEPHLPGTDHDGMTPGRNTSVQSGRVRSAGGGARLFVW*
Ga0075527_1011718813300006640Arctic Peat SoilGLMRELRAIGAAEVDAAAYVDGVRHGSVMVFATGPGEKADAAVAIMNRHCAVESEELNASVPHLPSTHQDDTAASRDGSVEAGRFRSPGAGARLFVW*
Ga0075521_1047216713300006642Arctic Peat SoilFENPASVDEIVRDLEASGILSKDVRVLAEPRAMAGSGVMSIPHTDFEVGLTRDLTAFGVVEPDAEAYVRGVRHGGVMVFATGPGEKADAAAEIMNRHHAVEIEELSGSEPHLPITDRDDTASGRDSPVLAGRVRSSGGGARLFVW*
Ga0075520_117375613300006795Arctic Peat SoilSTPHTDFEVGLMRELRAIGAAEVDAAAYVDGVRHGSVMVFATGPGEKADAAVAIMNRHCAVESEELNASAPHLPSTHQDDPAASRDSSVEAGRFRSPGAGARLFVW*
Ga0116128_106076623300009518PeatlandMAKTAVGLFQNPGSVDEVVRELKASGFAQKDVRVLREPREMAGSGVMSTPHTDFEVDLTRDLMAIGASEADAEAYVRGIRRGGVMVFATGEKADAAVRIMNHHRGVEIEELSASAPQLPSPVGDDVAPNRDSSAQTGRVRSAGTDARLFVW*
Ga0116108_100701113300009519PeatlandMAGSGVMSTPHTDFEVDLIRDLRAIGAAEADAEAYVRGVRRGGVMVFATGPGEKADAAAEIMNRHCAVEIEELSASVPHLPSTAGDDVAPGRDSSVQAGRVRSPGAGARLFVW*
Ga0116108_101590023300009519PeatlandMAKTAVGLFENPSSVDDVVHELEASGFPRNDVRVLGEPREMAGSGVMSTPHTDFEVDLTRDLMAIGASEADAEAYVRGIRRGGVMVFATGEKADAAVRIMNHHRGVEIEELSASAPQLPSPVGDDVAPNRDSSAQTGRVRSAGTDARLFVW*
Ga0116136_1000263303300009547PeatlandVLQIKLVEANMAKTAVGLFQNPGSVDEVVRELKASGFAQKDVRVLREPREMAGSGVMSTPHTDFEVDLTRDLMAIGASEADAEAYVRGIRRGGVMVFATGEKADAAVRIMNHHRGVEIEELSASAPQLPSPVGDDVAPNRDSSAQTGRVRSAGTDARLFVW*
Ga0116111_115981513300009616PeatlandMAGSGVMSTPHTDFEVELTRELKTIGATEADAEAYVRGVRRGGVMVFATGSPEKADAAAEIMNHHCAVEIEELSASVPHLPSTVGDDVAPARDSSVQSGRVRSPGAGARLFVW*
Ga0116123_112375223300009617PeatlandRSSVLQIKLMEVNMAKTAVGLFENPGSVDEVVRELKASGFAQKDVRVLREPREMAGSGVMSTPHTDFEVDLTRDLMAIGASEADAEAYVRGIRRGGVMVFATGEKADAAVRIMNHHRGVEIEELSASAPQLPSPVGDDVAPNRDSSAQTGRVRSAGTDARLFVW*
Ga0116105_100211723300009624PeatlandLQVSKRISSHPLPSNQIGLVDEMKPDDFKPVKSSVLQIKLMEVNVAKTAVGLFENPGSVDEVVRELKASGIPQKDVRVLCEPREMAGSGVMSTPHTDFEVDLIRDLRAIGAAEADAEAYVRGVRRGAVMVFATGSAEKADAAAEIMNHNCAVEIEELSTSVPHLPSTVGDDVAPGRDGSVQAGRVRSPGAGARLFVW*
Ga0116118_113879823300009637PeatlandEVDLIRDLRAIGAAEADAEAYVRGVRRGGVMVFATGSAEKADAAAEIMNHNCAVEIEELSASVPHLPSTVGDDVAPGRDSSVQAGRVRSPGAGARLFVW*
Ga0116126_100869073300009640PeatlandDLRAIGAAEADAEAYVRGVRRGGVMVFATGSPEKADAAAEIMNHNCAVEIEELSASVPHLPSTVGVDVAPGRDSSVQAGRVRSPGGGARLFVW*
Ga0116110_102481613300009643PeatlandKDVRVLGEPREMAGSGVMSIRHTDFEVDLIRELRTIGAAEADAEAYVEGVRRGGVMVFATDSGEKADAAAEIMNRHHAVEIEELSGSEPHLHRTDRDDMAPGRDSSVLAGRVRSSGGGARLFVW*
Ga0116121_112943613300009644PeatlandFEVDLIRDLRAIGAAEADAEAYVRGVRRGGVMVFATGSAEKADAAAEIMNHNCAVEIEELSTSVPHLPSTVGDDVAPGRDGSVQAGRVRSPGAGARLFVW*
Ga0116106_103785013300009645PeatlandVMDIPHTDFEVDLIRELKTIGATEADAEAYVQGVRRGGVMVFATDSGEKTDAAAEIMNRHHAVEIEELSGSEPHLAGTDGNDVAPGRQSSFMAGRIRSSGGGARLFVW*
Ga0116106_125873313300009645PeatlandPGSVEEVVRELKASGIPQKDVRVLREPREMAGGGVMSTPHTDFEVDLIRDLRAIGAAEADAEAYVRGLRRGGVMVFATGSAEKADAAAEIMNHNSAVEIEELSASVPHLPSTVGDDVAPARDSSVQAGRVRSPGGGARLFVW*
Ga0116132_121471823300009646PeatlandMDISHTDFEVELTRELKTIGATEADAEAYVQGVRRGGVMVFATDSGEKTDAAAEIMNRHHAVEIEELSGSEPHLAGTDGNDVAPGRQSSFMAGRIRSSGGGARLFVW*
Ga0116131_103820643300009760PeatlandRDMAGSGVMSTPHTDFEVDLIRDLRAIGAAEADAEAYVRGVRRGGVMVFATGPGEKADAAAEIMNRHCAVEIEELSASVPHLPSTAGDDVAPGRDSSVQAGRVRSPGAGARLFVW*
Ga0116130_113727613300009762PeatlandMSTPHTDFEVDLTRDLMAIGASEADAEAYVRGIRRGGVMVFATGEKADAAVRIMNHHRGVEIEELSASAPQLPSPVGDDVAPNRDSSAQTGRVRSAGTDARLFVW*
Ga0116134_1001915103300009764PeatlandVDLIRDLRAIGAAEADAEAYVRGLRRGGVMVFATGSAEKADAAAEIMNHNSAVEIEELSASVPHLPSTVGDDVAPARDSSVQAGRVRSPGGGARLFVW*
Ga0116134_114324813300009764PeatlandMSTPRTDFEVDLIRDLRAIGAAEADAEAYVRGVRRGGVMVFATGSPEKADAAAAIMNQNCAVEIEELSASAPHLPSTVGDDAPSGRDSSIQVGRVRSPGAGARLFVW*
Ga0116134_129970213300009764PeatlandPREMAGSGVMSTPHTDFEVDLIRDLRAIGAAEADAEAYVRGVRRGGVMVFATGSAEKADGAAEIMNHNCAVEIEELSASVPHLPSTVGGDVAPGRDSSVQAGRVRSPGAGARLFVW*
Ga0074045_1000582913300010341Bog Forest SoilPHTDFEVDLIRDLRAIGAAEADAEAYVRGVRRGGVMVFATGSPEKADAAAEIMNHNCAVEIEELSASVPHLPSTVGVDVAPGRDSSVQAGRVRSPGGGARLFVW*
Ga0074045_1001631613300010341Bog Forest SoilPHTDFEVDLIRDLRAIGAAEADAEAYVRGVRRGGVMVFATGSAEKADAAAEIMNHNCAVEIEELSTSVPHLPSTVGDDVAPGRDGSVQAGRVRSPGAGARLFVW*
Ga0074044_1002206113300010343Bog Forest SoilPHTDFEVDLIRDLRAIGAAEADAEAYVRGVRRGGVMVFATGSAEKADAAAEIMNHNCAVEIEELSTSVPHLPSTVGDDVAPGRDGSVQAGRVRSPGAGAR*
Ga0134125_1051011023300010371Terrestrial SoilMFKSFNLAAIRSNSSSELHAILASMPWADFEVDLVRELRTVGAAEADAEAYVKGVRDGGVIIFASGSDEKVDAAAEIMNRYSAVELEELGASEPHLQSSMTPARSSSGQTGRIRSCGGGARLFVW*
Ga0134125_1084182033300010371Terrestrial SoilSGMMSTPHTDFEVDLIRELRTVGAAEADAEAYVKGVRGGGVIIFASGSDEKVDAAAEIMNRHSAVELEELGGSEPHLHSSMTPGRNSSGQIGRIRSSGGGARLFVW*
Ga0134128_1026848153300010373Terrestrial SoilEMAGSGMMSTPHTDFEVDLIRELRTVGAAETDAEAYVKGVRGGGVIVFASGSDEKVDAAAEIMNRHSAVELEELGASEPHLHSSTTPARSSSGQTGRIRSSGGGARLFVW*
Ga0134128_1318500813300010373Terrestrial SoilMMSIPHTDFEVDLVRELRTVGAAEADAEAYVKGVRDGGVIIFASGSDEKVDAAAEIMNRYSAVELEELGASEPHLQSSMTPARSSSGQTGRIRSCGGGARLFVW*
Ga0134126_1063887713300010396Terrestrial SoilMAGRGMMSIPHTDFEVDLVRELRTVGAAEADAEAYVKGVRHGGVIISASGSDEKVDAAAEIMNRHSAVELEELGASEPHLQSSLTPARSSSGQTGRIRSCGGGARLFVW*
Ga0134126_1151296113300010396Terrestrial SoilPHTDFEVDLVRELRTVGAAEADAEAYVKGVRRGGVILFASGSDEKVDAAAEIMNRHSAVELEELNASEPHLHSSTTPRRDSSDQTGRIRSSGGGVRLFVW*
Ga0157373_1112913813300013100Corn RhizosphereAVERALVASLTRLGQAVAAYRGAAEADAEAYVKGLRGGGVIVFASGSDEKVDTAAEIMNRHCAIELEELRASEPHLHSSMTSGRSNSGQTGRIRSSGGGARLFVW*
Ga0181539_1000552403300014151BogMAKTAVGLFQNPGSVDEVVRELKTSGFAQKDVRVLREPREMAGSGVMSTPHTDFEVDLTRDLMAIGASEADAEAYVRGIRRGGVMVFATGEKADAAVKIMNHHRAVEIEELSASAPQLPSPVGDDVAPNRDSSAQTGRVRSAGTDARLFVW*
Ga0181539_119802223300014151BogLGEPREMAGSGVMSTPHTDFEVDLIRDLRAIGAAEADAEAYVRGVRRGGVMVFATGSPEKADAAAEIMNHHCAVEIEELSVSVPHLPGTVGDDVAPARDSSVQAGRVRSPGAGARLFVW*
Ga0181539_121899113300014151BogTDFEVDLIRDLRAIGAAEADAEAYVRGVRRGGVMVFATGSAEKADAAAEIMNHNCAVEIEELSASVPHLPSTVGDDVAPGRDSSVQAGRVRSPGAGARLFVW*
Ga0181533_112753313300014152BogMSTPHTDFEVDLTRDLMAIGASEADAEAYVRGIRRGGVMVFATGEKADAAVKIMNHHRAVEIEELSASAPQLPSPVGDDVAPNRDSSAQTGRVRSAGTDARLFVW*
Ga0181524_1021147713300014155BogKASGIPQKDVRVLGEPREMAGTGVMDIPHTDFEVDLIRELKTIGATETDAEAYVQGVRRGGVMVFATDSGEKTDAAAEIMNRHHAVEIEELSGSEPHLPRTDGNDMGPGRQSSVMTGRIRSSGGGARLFVW*
Ga0181524_1033961713300014155BogEADAEAYVRGVRRGGVMVFATGSPEKADAAAEIMNHHCAVEIEELSVSVPHLPGTVGDDVAPARDSSVQAGRVRSPGAGARLFVW*
Ga0181521_1001116363300014158BogPHTDFEVDLIRDLRAIGAAEADAEAYVRGVRRGGVMVFATGSAEKADAAAEIMNHNCAVEIEELSASVPHLPSTVGDDVAPGRDSSVQAGRVRSPGAGARLFVW*
Ga0181532_1028855213300014164BogHTDFEVDLTRELKTIGATEADAEAYVQGVRRGGVMVFATDSGEKTDAAAEIMNRHHAVEIEELSGSEPHLPSTDGNDMAPGRQSSVMAGRIRSSGGGARLFVW*
Ga0181532_1039966323300014164BogLREPREMAGSGVMSTPHTDFEVDLIRDLRAIGAAEADAAAAIMNQNCAVEIEELSASAPHLPSTVGDDAPSGRDSSIQVGRVRSPGAGARLFVW*
Ga0181532_1066756013300014164BogIRDLRAIGAAEADAEAYVRGVRRGGVMVFATGSAEKADAAAEIMNHNCAVEIEELSASVPHLPSTVGDDVAPGRDSSVQAGRVRSPGAGARLFVW*
Ga0181523_1046140313300014165BogREPREMAGSGVMSTPHTDFEVDLIRDLRAIGAAETDAEAYVRGVRRGGVMVFATGSAEKADAAAEIMNHNCAVEIEELSAGVPHLPSTVGGDVAPGRDSSVQAGRVRSPGAGARLFVW*
Ga0181526_1044867113300014200BogDLEASGFPRKDVRILGEPREMAGSGVMGIPHTDFEVDLTRELKTIGATEADAEAYVQGVRRGGVMVFATDSGEKTDAAAEIMNRHHAVEIEELSGSEPHLPSTDGNDMAPGHQSSVMAGRIRSSGGGARLFVW*
Ga0182014_1003895333300014491BogEVVRELKASGIPQKDVRVLREPREMAGSGVMSTPHTDFEVDLIRDLRAIGATETDAEAYVRGVRRGGVMVFATGSAEKADAAAEIMNHNCAVEIEELSASVPHLPSTVGGDVAPGRDSSVQAGRVRSPGAGARLFVW*
Ga0182015_1028854913300014495PalsaIGATEADAEAYVQGVRRGGVMVFATDSGEKTDAAAEIMNRHRAVEIEELSGSEPHLPSTDGNDMAPGRQSSVMAGRIRSSGGGARLFVW*
Ga0182012_1029268413300014499BogTDFEVDLIRDLKSFGALEADAEAYVRGVRRGGVMVFATGSPAMADNAAVIMNRHYAVEIEELSSPVAYLPSAEENETVPGREGSSQAGRVRASGSGARLFVW*
Ga0182030_1076965413300014838BogQKDVRVLREPREMAGSGVMSTPHTDFEVDLIRDLRAIGAAETDAEAYVRGVRRGGVMVFATGSAEKADAAAEIMNHNCAVEIEELSASVPHLPSTVGGDVAPGRDSSVQAGRVRTPGAGARLFVW*
Ga0187856_104620223300017925PeatlandMAKTAVGLFQNPGSVDEVVRELKASGFAQKDVRVLREPREMAGSGVMSTPHTDFEVDLTRDLMAIGASEADAEAYVRGIRRGGVMVFATGEKADAAVKIMNHHRAVEIEELSASAPQLPSPVGDDVAPNRDSSAQTGRVRSAGTDARLFVW
Ga0187856_129216723300017925PeatlandTRELKTIGATEADAEAYVQGVRRGGVMVFATDSGEKTDAAAEIMNRHHAVEIEELSGSEPHLAGTDGNDVAPGRQSSFMAGRIRSSGGGARLFVW
Ga0187877_100882463300017931PeatlandMAKTAVGLFQNPGSVDEVVRELKASGFAQKDVRVLREPREMAGSGVMSTPHTDFEVDLTRDLMAIGASEADAEAYVRGIRRGGVMVFATGEKADAAVRIMNHHRGVEIEELSASAPQLPSPVGDDVAPNRDSSAQTGRVRSAGTDARLFVW
Ga0187848_1041116313300017935PeatlandDFEVDLIRDLRAIGATEADAEAYVRGVRRGGVMVFATGSPEKADAAAEIMNHHCAVEIEELSASVPHLPSTVGDDVAPARDSSVQSGRVRSPGAGARLFVW
Ga0187879_10003370123300017946PeatlandMARTAVGLFENPGSVEEVVRELKASGIPQKDVRVLREPREMAGGGVMSTPHTDFEVDLIRDLRAIGAAEADAEAYVRGLRRGGVMVFATGSAEKADAAAEIMNHNSAVEIEELSASVPHLPSTVGDDVAPARDSSVQAGRVRSPGGGARLFVW
Ga0187879_1001390213300017946PeatlandVMSTPHTDFEVDLIRDLRAIGAAEADAEAYVRGVRRGGVMVFATGSAEKADAAAEIMNHNCAVEIEELSASVPHLPSTVGDDVAPGRDSSVQAGRVRSPGAGARLFVW
Ga0187879_1007374813300017946PeatlandDVRVLREPREMAGSGVMTTPHTDFEVDLIRDLRAIGATETDAEAYVRGVRRGGVMVFATGSPEKADAAAEIMNHNCAVEIEELSASVPHLPSTVGVDVAPGRDSSVQAGRVRSPGGGARLFVW
Ga0187891_103564623300017996PeatlandMAKTAVGLFQNPGSVDEVVRELKTSGFAQKDVRVLREPREMAGSGVMSTPHTDFEVDLTRDLMAIGASEADAEAYVRGIRRGGVMVFATGEKADAAVKIMNHHRAVEIEELSASAPQLPSPVGDDVAPNRDSSAQTGRVRSAGTDARLFVW
Ga0187868_106806913300018002PeatlandMAKTAVGLFQNPGSVDEVVRELKASGFAQKDVRVLREPREMAGSGVMSTPHTDFEVDLTRDLMAIGASEADAEAYVRGIRRGGVMVFATGEKADAAVKIMNHHRGVEIEELSASAPQLPSPVGDDVALNRDSSAQTGRVRSAGTDARLFVW
Ga0187878_125270613300018005PeatlandHTDFEVDLTRDLMAIGASEADAEAYVRGIRRGGVMVFATGEKADAAVRIMNHHRGVEIEELSASAPQLPSPVGDDVAPNRDSSAQTGRVRSAGTDARLFVW
Ga0187888_133198013300018008PeatlandVLGEPREMAGSGVMSTPRTDFDVDLIRDLRAIGAAEADAEAYVRGLRRGGVMVFATGSAEKADAAAEIMNHNSAVEIEELSASVPHLPSTVGDDVAPARDSSVQAGRVRSPGGGARLFVW
Ga0187884_1015021813300018009PeatlandPHTDFEVDLTRDLMAIGASEADAEAYVRGIRRGGVMVFATGEKADAAVRIMNHHRGVEIEELSASAPQLPSPVGDDVAPNRDSSAQTGRVRSAGTDARLFVW
Ga0187873_127543413300018013PeatlandREMAGSGVMSTPHTDFEVDLIRDLRAIGAAEADAEAYVRGVRRGGVMVFATGPGEKADAAAEIMNRHCAVEIEELSASVPHLPSTAGDDVAPGRDSSVQAGRVRSPGAGARLFVW
Ga0187860_121262113300018014PeatlandKDVRVLGEPREMAGSGVMSIRHTDFEVDLIRELRTIGAAEADAEAYVEGVRRGGVMVFATDSGEKADAAAEIMNRHHAVEIEELSGSEPHLHRTDRDDMAPGRDSSVLAGRVRSSGGGARLFVW
Ga0187880_100854293300018016PeatlandVRELKASGIPQKDVRVLREPREMAGSGVMSTPHTDFEVDLIRDLRAIGAAEADAEAYVRGVRRGGVMVFATGSPEKADAAAEIMNHNCAVEIEELSASVPHLPSTVGVDVAPGRDSSVQAGRVRSPGGGARLFVW
Ga0187872_1010704723300018017PeatlandVRELKASGIPQKDVRVLREPREMAGSGVMSTPHTDFEVDLIRDLRAIGAAEADAEAYVRGVRRGGVMVFATGSAEKADAAAEIMNHNCAVEIEELSASVPHLPSTVGDDVAPGRDSSVQAGRVRSPGAGARLFVW
Ga0187882_110811833300018021PeatlandTDFEVDLIRDLRAIGAAEADAEAYVRGLRRGGVMVFATGSAEKADAAAEIMNHNSAVEIEELSASVPHLPSTVGDDVAPARDSSVQAGRVRSPGGGARLFVW
Ga0187864_1011955723300018022PeatlandVDEVVRELKASGIPQKDVRVLREPREMAGSGVMSTPHTDFEVDLIRDLRAIGAAEADAEAYVRGVRRGGVMVFATGSAEKADAAAEIMNHNCAVEIEELSASVPHLPSTVGDDVAPGRDSSVQAGRVRSPGAGARLFVW
Ga0187889_1035482413300018023PeatlandMARTAVGLFENPGSVEEVVRELKASGIPQKDVRVLREPREMAGGGVMSTPHTDFEVDLIRDLRAIGAAEADAEAYVRGLRRGGVMVFATGSAEKADAAAEIMNHNSAVEIEELSASVPHLPSTVGDDVAPARDSS
Ga0187885_1007734623300018025PeatlandGSGVMSTPHTDFEVDLIRDLRAIGAAEADAEAYVRGVRRGGVMVFATGSPEKADAAAEIMNHHCAVEIEELSVSVPHLPGTVGDDVAPARDSSVQAGRVRSPGAGARLFVW
Ga0187885_1015190313300018025PeatlandTPHTDFEVDLIRDLRAIGAAEADAEAYVRGVRRGGVMVFATGSPEKADAAAAIMNQNCAVEIEELSASAPHLPSTVGDDAPSGRDSSIQVGRVRSPGAGARLFVW
Ga0187883_1001051113300018037PeatlandPHTDFEVDLIRDLRAIGAAEADAEAYVRGVRRGGVMVFATGSPEKADAAAEIMNHNCAVEIEELSASVPHLPSTVGVDVAPGRDSSVQAGRVRSPGGGARLFVW
Ga0187883_1069498313300018037PeatlandPHTDFEVDLIRDLRAIGAAEADAEAYVRGVRRGGVMVFATGSAEKADAAAEIMNHNCAVEIEELSTSVPHLPSTVGDDVAPGRDGSVQAGRVRSPGAGARLFVW
Ga0187855_1037364713300018038PeatlandPHTDFEVDLIRDLRAIGAAEADAEAYVRGVRRGGVMVFATGSPEKADAAAEIMNHNCAVEIEELSASVPHLPSTVGDDVAPGRDSSVQAGRVRSPGAGARLFVW
Ga0187862_1010663433300018040PeatlandVMSTPHTDFEVDLIRDLRAIGAAEADAEAYVRGVRRGGVMVFATGSPEKADAAAEIMNHNCAVEIEELSASVPHLPSTVGVDVAPGRDSSVQAGRVRSPGGGARLFVW
Ga0187851_1044221313300018046PeatlandGFPRKDVRILGEPREMAGSGVMGIPHTDFEVDLTRELKTIGATEADAEAYVQGVRRGGVMVFATDSGEKTDAAAEIMNRHHAVEIEELSGSEPHLPSTDGNDMAPGRQSSVMAGRIRSSGGGARLFVW
Ga0187859_1003504153300018047PeatlandEVDLIRDLRAIGAAEADAEAYVRGVRRGGVMVFATGSPEKADAAAEIMNHNCAVEIEELSASVPHLPSTVGVDVAPGRDSSVQAGRVRSPGGGARLFVW
Ga0187858_1036712913300018057PeatlandREPREMAGSGVMSTPHTDFEVDLIRDLRAIGATEADAEAYVRGVRRGGVMVFATGSAEKADAAAEIMNHNCAVEIEELSASVPHLPSTVGDDVAPGRDSSVQAGRVRSPGAGARLFVW
Ga0187852_143621313300019082PeatlandIPQKDVRVLREPREMAGSGVMSTPHTDFEVDLIRDLRAIGAAEADAEAYVRGVRRGGVMVFATGSAEKADAAAEIMNHNCAVEIEELSASVPHLPSTVGDDVAPGRDSSVQAGRVRSPGAGARLFVW
Ga0197907_1054583613300020069Corn, Switchgrass And Miscanthus RhizosphereLVRELRTVGAAEADAEAYVKGVRRGGVILFASGSDEKVDAAAEIMNRHSAVELEELNASEPHLHSSTTPRRDSSDQTGRIRSSGGGVRLFVW
Ga0206356_1145737313300020070Corn, Switchgrass And Miscanthus RhizosphereMSIPHTDFEVDLVRELRTVGAAEADAEAYVKGVRDGGVIIFASGSDEKVDAAAEIMNRYSAVELEELGASEPHLQSSMTPARSSSGQTGRIRSCGGGARLFVW
Ga0206352_1034012613300020078Corn, Switchgrass And Miscanthus RhizosphereADMAGRGGLSIPHTDFEVALVRELRTGGAAEADAEAYVKGVRDGGVIIFASGSDEKVDAAAEIMNRYSAVELEELGASEPHLQSSMTPARSSSGQTGRIRSCGGGARLFVW
Ga0224558_108711023300023090SoilKASGIPQKDVRVLREPREMAGSGVMSTPHTDFEVDLIRDLRAIGAAEADAEAYVRGVRRGGVMVFATGSAEKADAAAEIMNHNCAVEIEELSASVPHLPSTVGDDVAPGRDSSVQAGRVRSPGAGARLFVW
Ga0208076_104175223300025464Arctic Peat SoilMAKTAVGLFENRSSVDEVVRDLEASGFLGKEVRVLSEPPDMADNGLLSTPHTDFEVGLMRELRAIGAAEVDAAAYVDGVRHGSVMVFATGPGEKADAAVAIMNRHCAVESEELNASVPHLPSTHQDDTAASRDGSVEAGRFRSPGAGARLFVW
Ga0208688_108020313300025480PeatlandMAGSGVMSTPHTDFEVDLTRDLMAIGASEADAEAYVRGIRRGGVMVFATGEKADAAVRIMNHHRGVEIEELSASAPQLPSPVGDDVAPNRDSSAQTGRVRSAGTDARLFVW
Ga0208191_112928113300025496PeatlandEVVRELKASGIPQKDVRVLGEPREMAGSGVMSTPHTDFEVDLIRDLRAIGATEADAEAYVRGVRRGGVMVFATGSPEKADAAAEIMNHHCAVEIEELSASVPHLPSTVGDDVAPARDSSVQSGRVRSPGAGARLFVW
Ga0208686_111730823300025500PeatlandNPGSVEEVVRELKASGIPQKDVRVLREPREMAGGGVMSTPHTDFEVDLIRDLRAIGAAEADAEAYVRGLRRGGVMVFATGSAEKADAAAEIMNHNSAVEIEELSASVPHLPSTVGDDVAPARDSSVQAGRVRSPGGGARLFVW
Ga0208080_103587123300025553Arctic Peat SoilTGVMDIPHTDFEVDLIRELKTIGATEADAEAYVQGVRRGGVMVFATDSGEKTDAAAEIMNRHHAVEIEELSGSEPHLPRTDGNDMAPGRQSSVMAGRIRSSGGGARLFVW
Ga0208691_110595913300025612PeatlandPRKDVRILGEPREMAGSGVMDISHTDFEVELTRELKTIGATEADAEAYVQGVRRGGVMVFATDSGEKTDAAAEIMNRHHAVEIEELSGSEPHLAGTDGNDVAPGRQSSFMAGRIRSSGGGARLFVW
Ga0209584_1031117413300025878Arctic Peat SoilVVRDLEGSGILPKDIRVLGEPREMAGSGVTSIPHTDFEVGLTRDLTAFGVVEPDAEAYVRGVRHGGVMVFATGPGEKADAAAEIMNRHHAVEIEELSGSEPHLPITDRDDTASGRDSPVLAGRVRSSGGGARLFVW
Ga0209540_1034060523300025888Arctic Peat SoilRELKTIGATEADAEAYVQGVRRGGVMVFATDSGEKTDAAAEIMNRHHAVEIEELSGSEPHLPRTDGNDMAPGRQSSVMAGRIRSSGGGARLFVW
Ga0207674_1153795613300026116Corn RhizosphereNDIRVLSEPVDMAARGMMSIPHTDFEVDLVRELRTVGAAEADAEAYVTGVRHGGVIISASGSDEKVDAAAEIMNRHSAVELEELGASEPHLQSSLTPARSSSGQTGDSFFRWQRAPV
Ga0209167_1016454333300027867Surface SoilMELFTTFMAGSGTMSIPHTDFEVDFIRELRTAGAAEADAEAYVKGLRGGGVIVFASGSDEKVDAAAEIMNRHCAVELEELRALEPHLHSSMTPGRSSSGQTGRIRSSGGGARLFVW
Ga0302222_1034935713300028798PalsaMAGSGVMSTPHTDFEVDLTRDLRAFGADEAQAQAYVEGVRRGGVMVFATGSSPMADNAASIMNQNSAVDIEESGASETHLPGTDNSGEGESAPERDVSFQAGRVRTSGSAARLFVW
Ga0302199_107553413300028860BogPHTDFEVDLIRDLKSFGALEADAEAYVRGVRRGGVMVFATGSPAMADNAAVIMNRHYAVEIEELSSPVAYLPSAEENETVPGREGSSQAGRVRASGSGARLFVW
Ga0302278_1005738613300028866BogVDSVVLELEASGFPRTDVRVLGEPRDMAGSGVLSTPHTDFEVDLIRDLKSFGALEADAEAYVRGVRRGGVMVFATGSPAMADNAAVIMNRHYAVEIEELSSPVAYLPSAEENETVPGREGSSQAGRVRASGSGARLFVW
Ga0302154_1023831613300028882BogTPHTDFEVDLIRDLKSFGALEADAEAYVRGVRRGGVMVFATGSPAMADNAAVIMNRHYAVEIEELSSPVAYLPSAEENETVPGREGSSQAGRVRASGSGARLFVW
Ga0247275_100694613300029817SoilVMSTPHTDFEVDLIRDLRAIGAAEADAEAYVRGVRRGGVMVFATGSPEKADAAAEIMNHNCAVEIEELSASVPHLPSTVGDDVAPGRDSSVQAGRVRSPGAGARLFVW
Ga0247275_117957613300029817SoilAEADAEAYVRGVRRGGVMVFATGSPEKADAAAAIMNQNCAVEIEELSASAPHLPSTVGDDAPSGRDSSIQVGRVRSPGAGARLFVW
Ga0311358_1037930423300029915BogPRNDVRILGEPREMAGSGVMDIPHTDFEVDLIRELKTIGATEADAEAYVQGVRRGGVMVFATDSGEKTDAAAEIMNRHHAVEIEELSGSEPHLPRTDGNDMAPSRQRSVMAGRIRSSGGGARLFVW
Ga0265754_102583313300031040SoilAGSGVMDISHTDFEVELTRELKTIGATEADAEAYVQGVRRGGVMVFATDSGEKTDAAAEIMNRHHAVEIEELSGSEPHLAGTDGNDVAPGRQSSFMAGRIRSSGGGARLFVW
Ga0326728_1005572743300033402Peat SoilVGLIQELKTIGAAKADAEAYVRGVRRGGVMVFVTGSGNQTNTAAEIMNRHHAVEIEKLNASELHLPGTEGEDIAPDRNNSVQTGRARSTGDGARLFAW
Ga0334804_011673_3070_34113300033818SoilMAGSGVMDIPHTDFEVDLIRELKTIGATEADAEAYVQGVRRGGVMVFATDSGEKTDAAAEIMNRHHAVEIEELSGSEPHLPRTDGNDMAPSRQRSVMAGRIRSSGGGARLFVW

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.