NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F092584

Metagenome / Metatranscriptome Family F092584

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F092584
Family Type Metagenome / Metatranscriptome
Number of Sequences 107
Average Sequence Length 60 residues
Representative Sequence VLRSIENPNDVIVTHTFDSREAAREFFAMPELKEAMSQAGVNADSVEISYFDEVESGTLVGV
Number of Associated Samples 97
Number of Associated Scaffolds 107

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 1.87 %
% of genes near scaffold ends (potentially truncated) 95.33 %
% of genes from short scaffolds (< 2000 bps) 91.59 %
Associated GOLD sequencing projects 93
AlphaFold2 3D model prediction Yes
3D model pTM-score0.48

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (99.065 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(21.495 % of family members)
Environment Ontology (ENVO) Unclassified
(30.841 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(47.664 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 22.22%    β-sheet: 4.44%    Coil/Unstructured: 73.33%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.48
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 107 Family Scaffolds
PF01230HIT 5.61
PF01966HD 3.74
PF13450NAD_binding_8 3.74
PF03992ABM 2.80
PF01594AI-2E_transport 2.80
PF00440TetR_N 1.87
PF13487HD_5 1.87
PF10431ClpB_D2-small 0.93
PF01872RibD_C 0.93
PF12681Glyoxalase_2 0.93
PF13456RVT_3 0.93
PF08359TetR_C_4 0.93
PF03861ANTAR 0.93
PF02557VanY 0.93
PF01494FAD_binding_3 0.93
PF13302Acetyltransf_3 0.93
PF00027cNMP_binding 0.93
PF00903Glyoxalase 0.93
PF00155Aminotran_1_2 0.93
PF07498Rho_N 0.93
PF03703bPH_2 0.93
PF07221GlcNAc_2-epim 0.93
PF06224HTH_42 0.93

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 107 Family Scaffolds
COG0628Predicted PurR-regulated permease PerMGeneral function prediction only [R] 2.80
COG06542-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductasesEnergy production and conversion [C] 1.87
COG0262Dihydrofolate reductaseCoenzyme transport and metabolism [H] 0.93
COG0578Glycerol-3-phosphate dehydrogenaseEnergy production and conversion [C] 0.93
COG0644Dehydrogenase (flavoprotein)Energy production and conversion [C] 0.93
COG0665Glycine/D-amino acid oxidase (deaminating)Amino acid transport and metabolism [E] 0.93
COG1309DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmATranscription [K] 0.93
COG1876LD-carboxypeptidase LdcB, LAS superfamilyCell wall/membrane/envelope biogenesis [M] 0.93
COG1985Pyrimidine reductase, riboflavin biosynthesisCoenzyme transport and metabolism [H] 0.93
COG2173D-alanyl-D-alanine dipeptidaseCell wall/membrane/envelope biogenesis [M] 0.93
COG2942Mannose or cellobiose epimerase, N-acyl-D-glucosamine 2-epimerase familyCarbohydrate transport and metabolism [G] 0.93
COG3214DNA glycosylase YcaQ, repair of DNA interstrand crosslinksReplication, recombination and repair [L] 0.93
COG3402Uncharacterized membrane protein YdbS, contains bPH2 (bacterial pleckstrin homology) domainFunction unknown [S] 0.93
COG3428Uncharacterized membrane protein YdbT, contains bPH2 (bacterial pleckstrin homology) domainFunction unknown [S] 0.93
COG3707Two-component response regulator, AmiR/NasT family, consists of REC and RNA-binding antiterminator (ANTAR) domainsTranscription [K] 0.93

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms99.07 %
UnclassifiedrootN/A0.93 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001431|F14TB_102025165All Organisms → cellular organisms → Bacteria2515Open in IMG/M
3300003998|Ga0055472_10262882All Organisms → cellular organisms → Bacteria547Open in IMG/M
3300004081|Ga0063454_100727918All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria753Open in IMG/M
3300005168|Ga0066809_10051062All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Bogoriellaceae → Georgenia → Georgenia subflava927Open in IMG/M
3300005184|Ga0066671_10634276All Organisms → cellular organisms → Bacteria694Open in IMG/M
3300005186|Ga0066676_10373152All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium958Open in IMG/M
3300005186|Ga0066676_10793709All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria642Open in IMG/M
3300005330|Ga0070690_100876221All Organisms → cellular organisms → Bacteria701Open in IMG/M
3300005435|Ga0070714_100074122All Organisms → cellular organisms → Bacteria2950Open in IMG/M
3300005439|Ga0070711_100138691All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1820Open in IMG/M
3300005440|Ga0070705_100741706All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales775Open in IMG/M
3300005444|Ga0070694_101021103All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia687Open in IMG/M
3300005451|Ga0066681_10584922All Organisms → cellular organisms → Bacteria688Open in IMG/M
3300005454|Ga0066687_10953209All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria512Open in IMG/M
3300005455|Ga0070663_101456693All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales608Open in IMG/M
3300005546|Ga0070696_100015928All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia5055Open in IMG/M
3300005553|Ga0066695_10805205All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria542Open in IMG/M
3300005558|Ga0066698_10058485All Organisms → cellular organisms → Bacteria2455Open in IMG/M
3300005560|Ga0066670_10898616All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria539Open in IMG/M
3300005560|Ga0066670_11038820All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria501Open in IMG/M
3300005563|Ga0068855_101482491All Organisms → cellular organisms → Bacteria697Open in IMG/M
3300005563|Ga0068855_102281562All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia542Open in IMG/M
3300005574|Ga0066694_10618205All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria505Open in IMG/M
3300005587|Ga0066654_10621021All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria600Open in IMG/M
3300005842|Ga0068858_100996688All Organisms → cellular organisms → Bacteria821Open in IMG/M
3300006049|Ga0075417_10701763All Organisms → cellular organisms → Bacteria → Terrabacteria group520Open in IMG/M
3300006058|Ga0075432_10362972All Organisms → cellular organisms → Bacteria616Open in IMG/M
3300006173|Ga0070716_100774165All Organisms → cellular organisms → Bacteria740Open in IMG/M
3300006575|Ga0074053_11858017All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria613Open in IMG/M
3300006581|Ga0074048_13481057All Organisms → cellular organisms → Bacteria1495Open in IMG/M
3300006606|Ga0074062_12359030All Organisms → cellular organisms → Bacteria687Open in IMG/M
3300006791|Ga0066653_10082681All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_64_151420Open in IMG/M
3300006791|Ga0066653_10134294All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1181Open in IMG/M
3300006791|Ga0066653_10201740All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1007Open in IMG/M
3300006854|Ga0075425_101388069All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales795Open in IMG/M
3300006854|Ga0075425_102149005All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria622Open in IMG/M
3300006904|Ga0075424_102357450All Organisms → cellular organisms → Bacteria559Open in IMG/M
3300006969|Ga0075419_11062053All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. WSM1253592Open in IMG/M
3300009148|Ga0105243_13026792All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria510Open in IMG/M
3300009176|Ga0105242_10192136All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1808Open in IMG/M
3300009812|Ga0105067_1087122All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria550Open in IMG/M
3300009823|Ga0105078_1012247All Organisms → cellular organisms → Bacteria932Open in IMG/M
3300009840|Ga0126313_11540729All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium leguminosarum553Open in IMG/M
3300010044|Ga0126310_11127341All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria625Open in IMG/M
3300010154|Ga0127503_10999886All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales1608Open in IMG/M
3300010322|Ga0134084_10127512All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria837Open in IMG/M
3300010375|Ga0105239_13214097All Organisms → cellular organisms → Bacteria532Open in IMG/M
3300010399|Ga0134127_10192733All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1889Open in IMG/M
3300010400|Ga0134122_12981174All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria527Open in IMG/M
3300010403|Ga0134123_10101570All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2290Open in IMG/M
3300011439|Ga0137432_1180140All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Bogoriellaceae → Georgenia → Georgenia subflava682Open in IMG/M
3300012198|Ga0137364_11286729All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria545Open in IMG/M
3300012205|Ga0137362_11546526All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria550Open in IMG/M
3300012955|Ga0164298_10075651All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1709Open in IMG/M
3300012955|Ga0164298_11158209All Organisms → cellular organisms → Bacteria → Terrabacteria group583Open in IMG/M
3300012957|Ga0164303_10483205All Organisms → cellular organisms → Bacteria → Terrabacteria group788Open in IMG/M
3300012960|Ga0164301_11931289All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria500Open in IMG/M
3300012961|Ga0164302_10290783All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1061Open in IMG/M
3300012975|Ga0134110_10447327All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria580Open in IMG/M
3300012986|Ga0164304_10658180All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria790Open in IMG/M
3300014325|Ga0163163_10580902All Organisms → cellular organisms → Bacteria1184Open in IMG/M
3300014326|Ga0157380_12290951All Organisms → cellular organisms → Bacteria605Open in IMG/M
3300015359|Ga0134085_10124113All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1084Open in IMG/M
3300015371|Ga0132258_10191270All Organisms → cellular organisms → Bacteria4957Open in IMG/M
3300015373|Ga0132257_104598779All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium502Open in IMG/M
3300018052|Ga0184638_1194637All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Bogoriellaceae → Georgenia → Georgenia subflava715Open in IMG/M
3300018429|Ga0190272_10725651All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Bogoriellaceae → Georgenia → Georgenia subflava900Open in IMG/M
3300018469|Ga0190270_11091421All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Bogoriellaceae → Georgenia → Georgenia subflava830Open in IMG/M
3300018482|Ga0066669_11364847All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium642Open in IMG/M
3300019767|Ga0190267_11495046All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria520Open in IMG/M
3300021510|Ga0222621_1121540All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria556Open in IMG/M
3300022756|Ga0222622_10390202All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria978Open in IMG/M
3300022756|Ga0222622_10437384All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria926Open in IMG/M
3300024275|Ga0247674_1021067All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria755Open in IMG/M
3300025898|Ga0207692_10511278All Organisms → cellular organisms → Bacteria763Open in IMG/M
3300025920|Ga0207649_11074733All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Povalibacter → Povalibacter uvarum634Open in IMG/M
3300025922|Ga0207646_10035355All Organisms → cellular organisms → Bacteria4512Open in IMG/M
3300025924|Ga0207694_10588462All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria935Open in IMG/M
3300025934|Ga0207686_10192729All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1454Open in IMG/M
3300025939|Ga0207665_10852085All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria721Open in IMG/M
3300025949|Ga0207667_11733563All Organisms → cellular organisms → Bacteria590Open in IMG/M
3300025986|Ga0207658_10743131All Organisms → cellular organisms → Bacteria888Open in IMG/M
3300026540|Ga0209376_1208688All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium880Open in IMG/M
3300027560|Ga0207981_1036032All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Bogoriellaceae → Georgenia → Georgenia subflava901Open in IMG/M
3300027561|Ga0209887_1027804All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1314Open in IMG/M
3300027561|Ga0209887_1035430Not Available1125Open in IMG/M
3300028708|Ga0307295_10083849All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria848Open in IMG/M
3300028716|Ga0307311_10083402All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria880Open in IMG/M
3300028755|Ga0307316_10008061All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Dermacoccaceae → Flexivirga → Flexivirga caeni3262Open in IMG/M
3300028768|Ga0307280_10328233All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria562Open in IMG/M
3300028771|Ga0307320_10267157All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria676Open in IMG/M
3300028778|Ga0307288_10148553All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria881Open in IMG/M
3300028784|Ga0307282_10490645All Organisms → cellular organisms → Bacteria → Terrabacteria group596Open in IMG/M
3300028793|Ga0307299_10111569All Organisms → cellular organisms → Bacteria → Terrabacteria group1024Open in IMG/M
3300028793|Ga0307299_10282129All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium624Open in IMG/M
3300028811|Ga0307292_10511236All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium515Open in IMG/M
3300028819|Ga0307296_10540589All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria638Open in IMG/M
3300028881|Ga0307277_10421586All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium597Open in IMG/M
3300031226|Ga0307497_10285247All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Bogoriellaceae → Georgenia → Georgenia subflava751Open in IMG/M
3300031858|Ga0310892_10140786All Organisms → cellular organisms → Bacteria → Proteobacteria1385Open in IMG/M
3300031903|Ga0307407_10609512All Organisms → cellular organisms → Bacteria814Open in IMG/M
3300031938|Ga0308175_100083145All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium2894Open in IMG/M
3300032122|Ga0310895_10556914All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria583Open in IMG/M
3300032205|Ga0307472_101271523All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria707Open in IMG/M
3300033550|Ga0247829_10471197All Organisms → cellular organisms → Bacteria1038Open in IMG/M
3300034643|Ga0370545_121927All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Bogoriellaceae → Georgenia → Georgenia subflava585Open in IMG/M
3300034667|Ga0314792_150102All Organisms → cellular organisms → Bacteria622Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil21.50%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil14.02%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere7.48%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere5.61%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil4.67%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil4.67%
Groundwater SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand3.74%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment2.80%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil2.80%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil2.80%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere2.80%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere2.80%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil1.87%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil1.87%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil1.87%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere1.87%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.87%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere1.87%
SoilEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil0.93%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands0.93%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil0.93%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.93%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.93%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.93%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.93%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.93%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil0.93%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.93%
Switchgrass RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere0.93%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.93%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.93%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.93%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001431Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemlyEnvironmentalOpen in IMG/M
3300003998Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleC_D2EnvironmentalOpen in IMG/M
3300004081Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)EnvironmentalOpen in IMG/M
3300005168Soil and rhizosphere microbial communities from Laval, Canada - mgLPCEnvironmentalOpen in IMG/M
3300005184Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120EnvironmentalOpen in IMG/M
3300005186Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125EnvironmentalOpen in IMG/M
3300005330Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaGEnvironmentalOpen in IMG/M
3300005435Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaGEnvironmentalOpen in IMG/M
3300005439Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaGEnvironmentalOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005451Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130EnvironmentalOpen in IMG/M
3300005454Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136EnvironmentalOpen in IMG/M
3300005455Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaGHost-AssociatedOpen in IMG/M
3300005546Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaGEnvironmentalOpen in IMG/M
3300005553Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144EnvironmentalOpen in IMG/M
3300005558Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147EnvironmentalOpen in IMG/M
3300005560Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119EnvironmentalOpen in IMG/M
3300005563Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2Host-AssociatedOpen in IMG/M
3300005574Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143EnvironmentalOpen in IMG/M
3300005587Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103EnvironmentalOpen in IMG/M
3300005842Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2Host-AssociatedOpen in IMG/M
3300006049Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1Host-AssociatedOpen in IMG/M
3300006058Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1Host-AssociatedOpen in IMG/M
3300006173Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaGEnvironmentalOpen in IMG/M
3300006575Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAA (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006581Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006606Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMA (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006791Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102EnvironmentalOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300006969Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3Host-AssociatedOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300009812Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_50_60EnvironmentalOpen in IMG/M
3300009823Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_40_50EnvironmentalOpen in IMG/M
3300009840Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105AEnvironmentalOpen in IMG/M
3300010044Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60EnvironmentalOpen in IMG/M
3300010154Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010322Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300011439Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT820_2EnvironmentalOpen in IMG/M
3300012198Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012955Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MGEnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012960Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MGEnvironmentalOpen in IMG/M
3300012961Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MGEnvironmentalOpen in IMG/M
3300012975Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015EnvironmentalOpen in IMG/M
3300012986Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MGEnvironmentalOpen in IMG/M
3300014325Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaGHost-AssociatedOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300015359Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015EnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300018052Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2EnvironmentalOpen in IMG/M
3300018429Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 TEnvironmentalOpen in IMG/M
3300018469Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 TEnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300019767Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 TEnvironmentalOpen in IMG/M
3300021510Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_coexEnvironmentalOpen in IMG/M
3300022756Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1EnvironmentalOpen in IMG/M
3300024275Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK15EnvironmentalOpen in IMG/M
3300025898Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025920Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025924Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025934Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025939Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025949Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025986Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026540Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)EnvironmentalOpen in IMG/M
3300027560Soil and rhizosphere microbial communities from Laval, Canada - mgLPC (SPAdes)EnvironmentalOpen in IMG/M
3300027561Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40 (SPAdes)EnvironmentalOpen in IMG/M
3300028708Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152EnvironmentalOpen in IMG/M
3300028716Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198EnvironmentalOpen in IMG/M
3300028755Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356EnvironmentalOpen in IMG/M
3300028768Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119EnvironmentalOpen in IMG/M
3300028771Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369EnvironmentalOpen in IMG/M
3300028778Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142EnvironmentalOpen in IMG/M
3300028784Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121EnvironmentalOpen in IMG/M
3300028793Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159EnvironmentalOpen in IMG/M
3300028811Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149EnvironmentalOpen in IMG/M
3300028819Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153EnvironmentalOpen in IMG/M
3300028881Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116EnvironmentalOpen in IMG/M
3300031226Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_SEnvironmentalOpen in IMG/M
3300031858Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2EnvironmentalOpen in IMG/M
3300031903Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1Host-AssociatedOpen in IMG/M
3300031938Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1EnvironmentalOpen in IMG/M
3300032122Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300033550Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4EnvironmentalOpen in IMG/M
3300034643Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_120 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300034667Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8R1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
F14TB_10202516513300001431SoilHAFDSGEAAREFFAMPELKETMSSAGVNADSVEISYFEEVEARTLVGA*
Ga0055472_1026288223300003998Natural And Restored WetlandsVLGHQVLRSIENPNDVIVTHTFDSRDAAKAFFAMPELKEAMSQAGVDADSVQISYFDEVEAGTLVGV*
Ga0063454_10072791823300004081SoilGVQGHEVLRSIENPNDVIVTHTFDSIEVARDFFAMPELKEAMSQAGVNAESVEISYFEEVESGALVGA*
Ga0066809_1005106223300005168SoilGHQVLRSIENPNDVIVTHTFDSREAAKAFFAMPELKEAMSQAGVDADSVQISYFDEVEAGTLVGV*
Ga0066671_1063427623300005184SoilLRSIENPNDVIVTHTFDSREAANAFFAMPELKETMSKAGVNADSVQISYFDEVESGTLVGV*
Ga0066676_1037315233300005186SoilGHQVLRSIENPNDVIVTHTFDSREAARAFFAMPELKEAMSQAGVNADSVEISYFDEVEAGALVGA*
Ga0066676_1079370923300005186SoilHQVLRSIENPNDVIVTHTFDSPETARAFFAMPELKDAMREGGVDADAVEISYFNEVEIGALVGV*
Ga0070690_10087622113300005330Switchgrass RhizosphereLRSIENPNDVIVTHTFDSPEAAKAFFAMPELKEAMSQAGVDADSVQISYFDEVEAGTLVGA*
Ga0070714_10007412213300005435Agricultural SoilTHTFDSREAARAFFAMPELKEAMGKAGVKADSLEISYFDEVESGTLVGV*
Ga0070711_10013869113300005439Corn, Switchgrass And Miscanthus RhizosphereIENPNDVIVTHTFDSREAAKAFFAMPELKEAMSKGGVNADSVQISYFDEIESATLVGV*
Ga0070705_10074170623300005440Corn, Switchgrass And Miscanthus RhizosphereVIVTHAFDSSDAARAFFAMPELKQAMSEGGIDADAVEISYFDEVESGALVGV*
Ga0070694_10102110323300005444Corn, Switchgrass And Miscanthus RhizosphereHGVQNHQVLRSIDNPDDLIVTHTFDSHEAARAFFAMPELKETMSQAGVRPESVEISYFDEVENGALIGA*
Ga0066681_1058492213300005451SoilVLRSIENPNDVIVTHTFDSREAAREFFAMPELKEAMSQAGVNADSVEISYFDEVESGTLVGV*
Ga0066687_1095320913300005454SoilHQVLRSIENPNDVTVEHTFDSPEAAREFFARPELKEAMSKAGVNADSVQISYFDEVESGTLVGV*
Ga0070663_10145669313300005455Corn RhizosphereGHQVLRSIENPNDVIVTHAFDSSDAARAFFAMPELKQAMSEGGIDADAVEISYFDEVESGALVGA*
Ga0070696_10001592883300005546Corn, Switchgrass And Miscanthus RhizosphereRSIENPNDVIVTHAFDSSDAARAFFAMPELKQAMSEGGIDADAVEISYFDEVESGALVGV
Ga0066695_1080520513300005553SoilGVHAHQVLRSIENPNDVIVTHTFDSRETARAFFAMPELKEAMSGAGVNADSVETSYFDEVETGALVGV*
Ga0066698_1005848513300005558SoilHQVLRSIENPNEVIVTHTFESSEAARAFFAMPELMEAMSEGGVDTETVDISYFEEVEAGALVGA*
Ga0066670_1089861623300005560SoilRSIENPNDVIVTHTFDSREAAKAFFARPELKEAMSKAGVSTDSVQVSYFDEVESGALVGV
Ga0066670_1103882013300005560SoilHAHQVLRSTENPNDVIVTHTFDSREAAREFFAMPELKEAMSQAGVNADSVEISYFDEVESGTLVGV*
Ga0068855_10148249113300005563Corn RhizosphereAEHGVQGHQVLRSSENPNDVIVSHTFDSPEAARAFFAMPELKETMSKAGVTADSVEVSYFDEVEAGALVGA*
Ga0068855_10228156223300005563Corn RhizosphereHTFDSPEAASAFFAMPELKQGMSEGGVDAESVEISFFDEVESGALVGA*
Ga0066694_1061820513300005574SoilVLRSIENPNDVIVTHTFDSRETARAFFVMPELKEAMSGAGVNADSVETSYFDEVETGALVGV*
Ga0066654_1062102123300005587SoilHTFDSPEAAREFFARPELKEAMSKAGVNADSVQISYFDEGESGTLVGV*
Ga0068858_10099668813300005842Switchgrass RhizosphereENPNDVIVTHTFDSREAARAFFAMPELKEAMSKGGVNVDAVEISYFDEVEAGTLVGA*
Ga0075417_1070176313300006049Populus RhizosphereNNIIVTHTFDSPEAAREFFTTTEVKDAMGEAGVDAGSLEISYFDEIESGALVGV*
Ga0075432_1036297213300006058Populus RhizosphereHQVLRSIENPNDVLVTHAFDSGEAAREFFAMPELKETMSSAGVNADSVEISYFEEVEAGTLVGT*
Ga0070716_10077416513300006173Corn, Switchgrass And Miscanthus RhizosphereQGHQVLRSIENPNDVIVTHTFDSREAASAFFAMPELKEAMSKAGVNADSVKISYFDEVESGSLVGV*
Ga0074053_1185801713300006575SoilTENPNDVIVTHTFDSREAAKAFFAMPELKEAMSKAGVNADSVQISYFDEIESATLVGV*
Ga0074048_1348105743300006581SoilENPNDVIVTHTFDSPEAAREFFTTPELKEAMGEAGVDAGSLEISYFDEVESGALVGV*
Ga0074062_1235903033300006606SoilEVIVTHTFDSQEAARAFFAMTELKEAMGDGGVIADTVEVSYFDEIEAGVLVGA*
Ga0066653_1008268143300006791SoilEDPNDVIVTHTFDSPETARAFFAMPELKDAMRDGGVDVDAVDISYFNEVEIGALVGV*
Ga0066653_1013429433300006791SoilVTHTFESSEAARAFFAMPELMEAMSEGGVDTETVDISYFEEVEAGALVGA*
Ga0066653_1020174013300006791SoilENPNDIIVTHTFDSREAARAFFAMPELKEAMSQAGVNADSVEISYFDEVEAGALVGA*
Ga0075425_10138806913300006854Populus RhizosphereNDVIVTHTFESREAARAFFAMPELKEAMSEGGVNTDSVDISYFDEVEAGALVGA*
Ga0075425_10214900513300006854Populus RhizosphereVIVTHTFDSREAASAFFAMPELKEAMSKAGVNADSVEISYFDEVESGSLVGV*
Ga0075424_10235745023300006904Populus RhizosphereVRAHQVLRSTENPNNIIVTHTFDSPEAAREFFTTTEVKDAMGEAGVDAGSLEISYFDEIESGALVGV*
Ga0075419_1106205313300006969Populus RhizosphereENPNEVIVTHTFDSREAASAFFAMPELKGAMSQAGVKADSVEISYFDEVETGMLAGV*
Ga0105243_1302679213300009148Miscanthus RhizospherePKQAEHGVRAHQVLRSTEDRNNIIVTHTFDSPEAAREFFTTSEVKEAMGEAGVDPGSLEISYFDEIESGALIGV*
Ga0105242_1019213613300009176Miscanthus RhizosphereHQVLRSTENPNDVIVSHTFDSGEAARVFFAMPELKEAMSQAGVNADSLKISYFDEVESGALVGA*
Ga0105067_108712223300009812Groundwater SandQVLRSIENPNDVIVTHTFDSREAARAFFAMPELKEAMSQAGVDADSVEISYFDEVETSTLVGV*
Ga0105078_101224713300009823Groundwater SandLGHQVLRSIENPNDVIVTHTFDSREAARAFFAMPELKEAMSQAGVDADSVEISYFDEVETSTLVGV*
Ga0126313_1154072913300009840Serpentine SoilGVRGHQVLRSTENPNDVIVTHTFDSAEAAREFFAMPELKEAMSQAGVNADSVEISYYDEVEAGTLVGV*
Ga0126310_1112734123300010044Serpentine SoilMRLGSPLPHTFDSPEAARAFFARPELKETMSEAGVNADSVEISYFDEIEAGSLVSA*
Ga0127503_1099988613300010154SoilHGVLAHQVLRSIDSPNDVIVTHTFDSPESARAFFEMTELKDAMSGAGVDTGSLEIKYFDEVESGTLVGA*
Ga0134084_1012751233300010322Grasslands SoilIQAEHGVHAHQVLRSIESPNEVIVTHTFDSPEVARAFFATPELKEAMSKAGVKADSVEISYFDEVESSTLVGV*
Ga0105239_1321409733300010375Corn RhizosphereTHTFDSPEAAKAFFAIPELKEAMSQAGVDADSVQISYFDEVEAGTLVGV*
Ga0134127_1019273343300010399Terrestrial SoilENPNDVIVTHAFDSSDAARAFFAMPELKQAMSEGGIDADAVEISYFDEVESGALVGV*
Ga0134122_1298117413300010400Terrestrial SoilNPNDVIVSHTFDSGEAARAFFAMPELKEAMSQAGVNADSLKISYFDEVESGALVGA*
Ga0134123_1010157013300010403Terrestrial SoilNDVIVTHTFDSREAATAFFAMPEMKEAMSKAGVNADSVDISYFDEVESGTLVGV*
Ga0137432_118014013300011439SoilDVIVTHTFESPEAAKAFFAMPELKEAMSQAGVEADSVQISYFDEVEAGTLVGV*
Ga0137364_1128672923300012198Vadose Zone SoilVLRSIENPNDVAVTHTFDSREAARDFFAQPELKEAMSQAGVNAESVDISYIDEVESGALVDA*
Ga0137362_1154652623300012205Vadose Zone SoilVLRSIENPNDVTVEHTFDSPEAAREFFARPELKEAMSKAGVNADSVQISYFDEVESGTLVGV*
Ga0164298_1007565123300012955SoilVRAHQVLRSTDDPNDIIVIHTFDSPSEAQAFFAMPELKRAMSQAGVKADTVTISYFDEVDTSTLTAV*
Ga0164298_1115820923300012955SoilSTENPNDIIVTHTFDSPEAAREFFTTPELKEAMGEAGVDAGSLEISYFDEVESGTLVGV*
Ga0164303_1048320513300012957SoilAHQVLRSTENPNDVIVTHTFDSAEAAREFFTMPELKEAMGEGGVDAGSLEISYFDEVESGTLVGV*
Ga0164301_1193128923300012960SoilGVHAHQVLRSIENPNDVIVTHTFDSSEAARAFFAMPELKEAMSEGGVDTESVDISYFDEVEAGALVGA*
Ga0164302_1029078343300012961SoilIVTHTFDSQEAARAFFAMTELKDAMGDGGVIADTVEVSYFDEIEAGVLVGA*
Ga0134110_1044732713300012975Grasslands SoilDVTVEHTFDSPEAAREFFARPELKEAMSKAGVNADSVQISYFDEVESGTLVGV*
Ga0164304_1065818023300012986SoilVLRSIENPNDVIVTHTFDSPETARAFFAMPELKEAMSEGGVDADAVEISYFNEVEAGALVGV*
Ga0163163_1058090223300014325Switchgrass RhizosphereVLRSIENPNDVIVTHTFDSPEAASAFFAMPELKQGMSEGGVDAESVEISFFDEVESGALVGA*
Ga0157380_1229095113300014326Switchgrass RhizosphereNDVIVTHTFDSRDGAKAFFAMPELKEAMSQAGVDADSLEISYFDEVEAGTLVGA*
Ga0134085_1012411333300015359Grasslands SoilAHQVLRSIENPNEVIVTHTFESSEAARAFFAMPELMEAMSEGGVDTETVDISYFEEVEAGALVGA*
Ga0132258_1019127013300015371Arabidopsis RhizosphereAPIQAEHGVRAHQVLRSIENPNDVIVTHAFDSSDAARAFFAMPELKQAMSEGGIDADAVEISYFDEVESGALVGV*
Ga0132257_10459877923300015373Arabidopsis RhizosphereVIVTHTFDSREAARAFFAMPELKEAMSKAGVNADSVEISYFDEVESGTLVGV*
Ga0184638_119463723300018052Groundwater SedimentVTHTFDSPEAAKAFFAMPELKEAMSQAGVDADSVQISYFDEIEAGTLVGV
Ga0190272_1072565123300018429SoilIENPNNVIVTHTFDSLDAARAFFATPELKEAMSQAGVDADSVEISYFDEVEAGTLVGV
Ga0190270_1109142123300018469SoilPNDVIVTHTFDSREAARAFFAMPELKEGMSQGGVNPDSVEISYFDEVETGALVGV
Ga0066669_1136484713300018482Grasslands SoilDIIVTHTFDSREAARAFFAMPELKEAMSQAGVNADSVEISYFDEVEAGALVGA
Ga0190267_1149504623300019767SoilVTHTFDSREAARAFFAMPELKEAMSQAGVDADSVEISYFDEVESGALVGA
Ga0222621_112154013300021510Groundwater SedimentVENPNDVIVTHTFDSREAASAFFAMPELKEAMSKAGVNADSVQISYFDEIESATLVGV
Ga0222622_1039020213300022756Groundwater SedimentIVTHTFDSREAARAFFAMPELKEAMSDAGVRADSVEISYFDEVEIGALVGA
Ga0222622_1043738433300022756Groundwater SedimentENPNDVVVTHTFDSREAAHAFFARPELKETMSEAGVKADSVEISYFDEVEAGSLVSV
Ga0247674_102106713300024275SoilIQAEHGVRAHQVLRSIENPNDVIVTHAFDSSDAARAFFAMPELKQAMSEGGIDADAVEISYFDEVESGALVGV
Ga0207692_1051127813300025898Corn, Switchgrass And Miscanthus RhizosphereHGVRAHQVLRSIENPNDVIVTHAFDSPEAARAFFATPELKEAMSKAGVNADSVEISYFEEVEAGTLVGV
Ga0207649_1107473323300025920Corn RhizosphereVLRSIENPNDVIVTHAFDSSDAARAFFAMPELKQAMSEGGIDADAVEISYFDEVESGALVGV
Ga0207646_1003535563300025922Corn, Switchgrass And Miscanthus RhizosphereDVIVTHTFDSREAARAFFAMPELKEAMGKAGVKADSLEISYFDEVESGTLVGV
Ga0207694_1058846213300025924Corn RhizosphereVLRSTENPNDVIVSHTFDSGEAARAFFAMPELKEAMSQAGVNADSLKISYFDEVESGALVGA
Ga0207686_1019272913300025934Miscanthus RhizospherePNDVIVSHTFDSGEAARAFFAMPELKEAMSQAGVNADSLKISYFDEVESGALVGA
Ga0207665_1085208533300025939Corn, Switchgrass And Miscanthus RhizosphereSIENPNDVIVTHTFDSREAASAFFAMPELKEAMSKAGVNADSVKISYFDEVESGSLVGV
Ga0207667_1173356323300025949Corn RhizosphereAHQVLRSIENPNDVIVSHTFDSPEAARAFFAMPELKETMSKAGVTADSVEVSYFDEVEAGALVGA
Ga0207658_1074313123300025986Switchgrass RhizosphereEHGVHAHQVLRSTENPNDVIVSHTFDSGEAARAFFAMPELKEAMSQAGVNADSLKISYFDEVESGALVGA
Ga0209376_120868833300026540SoilENPNDVVATHTFDSRDTARAFFAMPELKEAMSEAGVNADSVEISYFDEVEAGALVGV
Ga0207981_103603223300027560SoilNPNDVIVTHTFDSREAAKAFFAMPELKEAMSQAGVDADSVQISYFDEVEAGTLVGV
Ga0209887_102780423300027561Groundwater SandTHTFDSREAARAFFAMPELKEAMSQAGVDADSVEISYYDEVETGTLVGV
Ga0209887_103543023300027561Groundwater SandENPNDVIVTHTFDSREAARAFFAMPELKEAMSQAGVDAGSVQISYFDEVEAGTLVGV
Ga0307295_1008384913300028708SoilIENPNDVVVTHTFESREAAHAFFARPELKETMNEAGVKADSVEISYFDEVEAGSLVSV
Ga0307311_1008340233300028716SoilVLRSNENPNDIVVTHTFDSPEAAREFFTTPELKEAMGEAGVDAGSLEISYFDEVESGTLVGV
Ga0307316_1000806113300028755SoilVTHTFDSREAARAFFAMPELKEAMSEGGVNADAVEISYFDEVEAGALVGA
Ga0307280_1032823323300028768SoilIENPNDVVVTHTFESREAAHAFFARPELKETMSEAGVKADSVEISYFDEVEAGSLVSV
Ga0307320_1026715733300028771SoilNPNDVIVTNTFDSREAAKAFFAMPELKEAMSKAGVNADSVQISYFDEIESATLVGV
Ga0307288_1014855333300028778SoilAPIQAEHGVQSHQVLRSIESPDEVIVTHTFESPETARGFFAMPELKETMRKAGVDADAVEISYYDEVESSTLVGV
Ga0307282_1049064513300028784SoilIIVTHTFDSPEAARQFFTTPELKEAMGEAGVDAASLEISYFDEVESGTLVGV
Ga0307299_1011156913300028793SoilRSTQNPNDIIVTHTFDSPEAAREFFTTPELKQAMGEAGVDAGSLEISYFDEVESGTLVGV
Ga0307299_1028212913300028793SoilEHGVHAHQVLRSIENPTDVIVTHTFDSREAAMAFFAMPELKEAMSQAGVNADSVEISYFDEVEAGTLVGV
Ga0307292_1051123613300028811SoilVLRSIENPNDVIVTHTFDSREAASAFFAMPELKEAMSQGGVNADSVEISYFDEVETGALAGV
Ga0307296_1054058913300028819SoilQVLRSIENPNDVVVTHTFESREAAHAFFARPELKETMSEAGVKADSVEISYFDEVEAGSLVSV
Ga0307277_1042158613300028881SoilVIVTHRFDSREAARAFFAMPELKEAMSQGGVSTESVEISYYDEVETGALVGV
Ga0307497_1028524713300031226SoilLRSIENPNDVIVTHTFDSPEAAKAFFAMPELKEAMSQAGVDANSVQISYFDEVEAGTLVG
Ga0310892_1014078613300031858SoilAEHGVRAHQVLRSIENPNDVIVTHAFDSSDAARAFFAMPELKQAMSEGGIDADAVEISYFDEVESGALVGV
Ga0307407_1060951213300031903RhizosphereRAHQVLRSIENPNDVIVTHTFDSPETARAFFAMPELKEAMSEGGVDADAVEISYFNEVEAGALVGV
Ga0308175_10008314513300031938SoilIIVIHTFDSPSEAQAFFAMPELKQAMSQAGVKADTVTISYFEEVEAGTLAAV
Ga0310895_1055691413300032122SoilIENPNDVIVTHTFDSREAASAFFAMPELKEAMGKAGVDADSVKISYFDEVESGSLVGV
Ga0307472_10127152323300032205Hardwood Forest SoilIVIHTFDSRDAASAFFALPELKEAMSKAGVKADSVEISYFDEVESGTLVGV
Ga0247829_1047119733300033550SoilGVQAHQVLRSIENPNDVIVTHTFDSPETARAFFAMPQLKEAMSEGGVDADAVEISYFNEVEAGALVGV
Ga0370545_121927_2_1843300034643SoilRSIENPNDVIVTHTFDSREAAKAFFAMPELKEAMGQAGVDAASVQISYFDEVEAGTLVGV
Ga0314792_150102_3_1673300034667SoilNDVLVTHAFDSGEAAREFFAMPELKETMSSAGVNADSVEISYFEEVEAGTLVGA

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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