Metagenome / Metatranscriptome Family F092580

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F092580
Family Type	Metagenome / Metatranscriptome
Number of Sequences	107
Average Sequence Length	62 residues
Representative Sequence	MKRRELIRAGFLAGAAAALRPSVGKAQSAAQSSELTPAQSGVDASKDLAAPGWKPLFL
Number of Associated Samples	92
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	95.33 %
% of genes from short scaffolds (< 2000 bps)	90.65 %
Associated GOLD sequencing projects	90
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.23

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (82.243 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (21.495 % of family members)
Environment Ontology (ENVO)	Unclassified (34.579 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (66.355 % of family members)

Multiple Sequence Alignments

Select alignment to view:

Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86 1FA3_03059060 2JGI1027J11758_115047912 3JGI1027J11758_119976051 4JGIcombinedJ51221_103506312 5Ga0062384_1007112961 6Ga0062384_1009523871 7Ga0062387_1010768161 8Ga0062386_1003245221 9Ga0062590_1006422372 10Ga0062595_1013692072 11Ga0066680_109510911 12Ga0066684_104868221 13Ga0066685_102906141 14Ga0066685_110952781 15Ga0066671_105311152 16Ga0066388_1013272703 17Ga0066388_1049663761 18Ga0070709_113101641 19Ga0070714_1008393941 20Ga0070701_110861701 21Ga0070706_1014755352 22Ga0066699_108950302 23Ga0066706_102057053 24Ga0070762_112510521 25Ga0068860_1027410162 26Ga0066789_100146965 27Ga0075029_1013072211 28Ga0075019_110909882 29Ga0070716_1009395262 30Ga0070712_1004081482 31Ga0070765_1010141141 32Ga0070765_1017805382 33Ga0075021_107758751 34Ga0079220_107627142 35Ga0075433_118578981 36Ga0075425_1011422911 37Ga0075434_1021638091 38Ga0073928_112340261 39Ga0075426_103321653 40Ga0075426_104657311 41Ga0075436_1004509502 42Ga0066709_1042966341 43Ga0116214_14189701 44Ga0126380_101019372 45Ga0074046_105235651 46Ga0126370_104419612 47Ga0126370_106666501 48Ga0126376_131212101 49Ga0126372_120796262 50Ga0126377_122177081 51Ga0134126_103921811 52Ga0150983_133642833 53Ga0137364_108100642 54Ga0137383_101360203 55Ga0137363_112583742 56Ga0137360_103507231 57Ga0137359_101213091 58Ga0137404_105539822 59Ga0126369_101261773 60Ga0126369_110659591 61Ga0126369_136437311 62Ga0134110_100856711 63Ga0134078_102472732 64Ga0173480_111813412 65Ga0210407_101460554 66Ga0210407_106271192 67Ga0210399_100004261 68Ga0210399_105897692 69Ga0210399_109400031 70Ga0210395_103817991 71Ga0210395_112781341 72Ga0210401_109683291 73Ga0215015_107752761 74Ga0210406_105231522 75Ga0210396_102341751 76Ga0210393_110147882 77Ga0210386_101250471 78Ga0210394_117221512 79Ga0210402_108747512 80Ga0210402_119083481 81Ga0210409_101021911 82Ga0242660_12229471 83Ga0212123_106208902 84Ga0224551_10462471 85Ga0247669_10509453 86Ga0207660_110339921 87Ga0209240_12228831 88Ga0209239_12490621 89Ga0209154_11382492 90Ga0209473_12601211 91Ga0257171_10838221 92Ga0257156_11256951 93Ga0209160_11569891 94Ga0209729_10525741 95Ga0209214_10094402 96Ga0209772_101638152 97Ga0170823_122260472 98Ga0307474_101816993 99Ga0307469_101871372 100Ga0307469_115424252 101Ga0318546_102460751 102Ga0318568_102480072 103Ga0310913_103030391 104Ga0307479_106224143 105Ga0307470_119011981 106Ga0307471_1022633051 107Ga0335081_117648831
Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86 1FA3_03059060 2JGI1027J11758_115047912 3JGI1027J11758_119976051 4JGIcombinedJ51221_103506312 5Ga0062384_1007112961 6Ga0062387_1010768161 7Ga0062590_1006422372 8Ga0062595_1013692072 9Ga0066680_109510911 10Ga0066684_104868221 11Ga0066671_105311152 12Ga0066388_1013272703 13Ga0070709_113101641 14Ga0070714_1008393941 15Ga0070706_1014755352 16Ga0066706_102057053 17Ga0070762_112510521 18Ga0066789_100146965 19Ga0070712_1004081482 20Ga0070765_1017805382 21Ga0075021_107758751 22Ga0079220_107627142 23Ga0075434_1021638091 24Ga0066709_1042966341 25Ga0126380_101019372 26Ga0126370_104419612 27Ga0126370_106666501 28Ga0126372_120796262 29Ga0126377_122177081 30Ga0150983_133642833 31Ga0137364_108100642 32Ga0210407_106271192 33Ga0210399_105897692 34Ga0210402_108747512 35Ga0212123_106208902 36Ga0224551_10462471 37Ga0247669_10509453 38Ga0307469_115424252 39Ga0310913_103030391 40Ga0307471_1022633051 41Ga0335081_117648831
Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58 1Ga0242660_12229471 2FA3_03059060 3JGI1027J11758_115047912 4JGI1027J11758_119976051 5JGIcombinedJ51221_103506312 6Ga0066684_104868221 7Ga0066671_105311152 8Ga0066388_1013272703 9Ga0070709_113101641 10Ga0070714_1008393941 11Ga0070706_1014755352 12Ga0066699_108950302 13Ga0070762_112510521 14Ga0066789_100146965 15Ga0070712_1004081482 16Ga0070765_1017805382 17Ga0075021_107758751 18Ga0079220_107627142 19Ga0075433_118578981 20Ga0075434_1021638091 21Ga0073928_112340261 22Ga0075426_104657311 23Ga0126380_101019372 24Ga0126370_104419612 25Ga0126370_106666501 26Ga0126376_131212101 27Ga0126372_120796262 28Ga0126377_122177081 29Ga0137364_108100642 30Ga0137363_112583742 31Ga0137359_101213091 32Ga0137404_105539822 33Ga0126369_101261773 34Ga0126369_136437311 35Ga0173480_111813412 36Ga0210407_101460554 37Ga0210399_100004261 38Ga0210399_105897692 39Ga0210399_109400031 40Ga0210395_103817991 41Ga0210401_109683291 42Ga0215015_107752761 43Ga0210406_105231522 44Ga0210393_110147882 45Ga0210394_117221512 46Ga0210402_108747512 47Ga0210409_101021911 48Ga0224551_10462471 49Ga0247669_10509453 50Ga0207660_110339921 51Ga0209772_101638152 52Ga0307469_115424252 53Ga0318546_102460751 54Ga0307470_119011981 55Ga0335081_117648831
Powered by MSAViewer

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 18.60% β-sheet: 0.00% Coil/Unstructured: 81.40%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
WebGL does not seem to be available. This can be caused by an outdated browser, graphics card driver issue, or bad weather. Sometimes, just restarting the browser helps. Also, make sure hardware acceleration is enabled in your browser. For a list of supported browsers, refer to http://caniuse.com/#feat=webgl. Load File(s)

Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.23
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.23
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF07969	Amidohydro_3	10.28
PF01261	AP_endonuc_2	7.48
PF01022	HTH_5	3.74
PF00106	adh_short	2.80
PF00069	Pkinase	2.80
PF12704	MacB_PCD	2.80
PF13360	PQQ_2	1.87
PF00990	GGDEF	1.87
PF14378	PAP2_3	0.93
PF13407	Peripla_BP_4	0.93

Showing 1 to 10 of 27 entries

Previous1 2 3Next

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	11.21
COG3191	L-aminopeptidase/D-esterase	Amino acid transport and metabolism [E]	1.87
COG0288	Carbonic anhydrase	Inorganic ion transport and metabolism [P]	0.93
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	0.93
COG2227	2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase	Coenzyme transport and metabolism [H]	0.93
COG2230	Cyclopropane fatty-acyl-phospholipid synthase and related methyltransferases	Lipid transport and metabolism [I]	0.93
COG2322	Cytochrome oxidase assembly protein CtaM/YozB, DUF420 family	Posttranslational modification, protein turnover, chaperones [O]	0.93
COG2442	Predicted antitoxin component of a toxin-antitoxin system, DUF433 family	Defense mechanisms [V]	0.93
COG4934	Serine protease, subtilase family	Posttranslational modification, protein turnover, chaperones [O]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	82.24 %
Unclassified	root	N/A	17.76 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	82.24 %
Unclassified	root	N/A	17.76 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	82.24 %
Unclassified	root	N/A	17.76 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	57.94 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.80 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.87 %
Unclassified	root	N/A	17.76 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	8.41 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.93 %
Deinococcus-Thermus	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus	0.93 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2.80 %
Unclassified	root	N/A	17.76 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	15.89 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	15.89 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	8.41 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.93 %
Deinococci	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci	0.93 %
Nevskiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	1.87 %
Unclassified	root	N/A	17.76 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	15.89 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8.41 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.93 %
Sinobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae	1.87 %
Thermales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Thermales	0.93 %
Unclassified	root	N/A	17.76 %
Xanthomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	0.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	15.89 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8.41 %
Actinomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales → Actinomycetaceae	0.93 %
Nevskia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia	1.87 %
Pseudoxanthomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Pseudoxanthomonas	0.93 %
Thermaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Thermales → Thermaceae	0.93 %
Unclassified	root	N/A	17.76 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	15.89 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8.41 %
Actinomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales → Actinomycetaceae → Actinomyces	0.93 %
Meiothermus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Thermales → Thermaceae → Meiothermus	0.93 %
Nevskia soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	1.87 %
Unclassified	root	N/A	17.76 %
unclassified Pseudoxanthomonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Pseudoxanthomonas → unclassified Pseudoxanthomonas	0.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	15.89 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8.41 %
Meiothermus taiwanensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Thermales → Thermaceae → Meiothermus → Meiothermus taiwanensis	0.93 %
Nevskia soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	1.87 %
Pseudoxanthomonas sp. CF125	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Pseudoxanthomonas → unclassified Pseudoxanthomonas → Pseudoxanthomonas sp. CF125	0.93 %
Unclassified	root	N/A	17.76 %
unclassified Actinomyces	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales → Actinomycetaceae → Actinomyces → unclassified Actinomyces	0.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	15.89 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8.41 %
Actinomyces sp. ICM47	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales → Actinomycetaceae → Actinomyces → unclassified Actinomyces → Actinomyces sp. ICM47	0.93 %
Meiothermus taiwanensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Thermales → Thermaceae → Meiothermus → Meiothermus taiwanensis	0.93 %
Nevskia soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	1.87 %
Pseudoxanthomonas sp. CF125	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Pseudoxanthomonas → unclassified Pseudoxanthomonas → Pseudoxanthomonas sp. CF125	0.93 %
Unclassified	root	N/A	17.76 %

Visualization
Download SVG Download PNG Download CSV
Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000789\|JGI1027J11758_11504791	All Organisms → cellular organisms → Bacteria → Acidobacteria	513	Open in IMG/M
3300000789\|JGI1027J11758_11997605	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	768	Open in IMG/M
3300003505\|JGIcombinedJ51221_10350631	All Organisms → cellular organisms → Bacteria	600	Open in IMG/M
3300004082\|Ga0062384_100711296	Not Available	693	Open in IMG/M
3300004082\|Ga0062384_100952387	Not Available	611	Open in IMG/M
3300004091\|Ga0062387_101076816	All Organisms → cellular organisms → Bacteria → Acidobacteria	621	Open in IMG/M
3300004152\|Ga0062386_100324522	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1230	Open in IMG/M
3300004157\|Ga0062590_100642237	All Organisms → cellular organisms → Bacteria	942	Open in IMG/M
3300004479\|Ga0062595_101369207	Not Available	642	Open in IMG/M
3300005174\|Ga0066680_10951091	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Thermales → Thermaceae → Meiothermus → Meiothermus taiwanensis	506	Open in IMG/M

Showing 1 to 10 of 103 entries

Previous1 2 3 4 5…11Next

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.46%
Host-Associated	Host-Associated	6.54%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	9.35%
Plants	Host-Associated → Plants	6.54%
Terrestrial	Environmental → Terrestrial	84.11%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	4.67%
Peat	Environmental → Terrestrial → Peat	0.93%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.93%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.61%
Sediment	Environmental → Aquatic → Sediment	2.80%
Soil	Environmental → Terrestrial → Soil	83.18%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.87%

Habitat	Taxonomy	Distribution
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.93%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.87%
Loam	Environmental → Terrestrial → Soil → Loam	14.95%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	65.42%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.61%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.80%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.93%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.67%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.80%

Habitat	Taxonomy	Distribution
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.87%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.80%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.54%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	4.67%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	28.04%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.41%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	14.02%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.93%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.61%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.80%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.87%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.93%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.93%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	4.67%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.93%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.93%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.67%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.74%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.93%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.93%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.80%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.87%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.61%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.87%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.93%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	21.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	11.21%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.87%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.93%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.93%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.93%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	8.41%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.87%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.61%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.80%

Visualization
Download SVG Download PNG Download CSV
Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459023	Grass soil microbial communities from Rothamsted Park, UK - FA3 (control condition)	Environmental	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M

Showing 1 to 10 of 92 entries

Previous1 2 3 4 5…10Next

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FA3_03059060	2170459023	Grass Soil	MKRRELLRVGALAGAVTALRPPLATPQTASKSPELTPAQSGIDASQELFAANWKPLFLDDHQNETLII
JGI1027J11758_115047912	3300000789	Soil	MRRRELLKAGAFAGMVAALRPPIAQGQDTKTNAELTPAQSGVDASNDLAAPGWKPKFFDEHQNETLI
JGI1027J11758_119976051	3300000789	Soil	MKRRELLRAGVLTGATAALTSSLSMAQSAAQTTAQSSELTPAQRGVDASNELSAPGWKPLFL
JGIcombinedJ51221_103506312	3300003505	Forest Soil	MKRREMLRASVLAGAAAALRPALSSAQSGAQGTAPLPELTPAQNGVDASKDLAAPGWKPLFLDDHQ
Ga0062384_1007112961	3300004082	Bog Forest Soil	MKRRELIRAGILSGAVAAALHPQLALAQGASPSSELTPAQSGVDASKDLAA
Ga0062384_1009523871	3300004082	Bog Forest Soil	MKRRELIRAGVLSGAVAAALHPRLALAQGGSPSPSSELTPAQSGVDASKDLAA
Ga0062387_1010768161	3300004091	Bog Forest Soil	MKRRELIRAGFLAGAAAALRPPVGKAQNPVQSSELTPAQSGVDASKDLAAPGWKPL
Ga0062386_1003245221	3300004152	Bog Forest Soil	MKRRELIRAGVLSGAVAAALRPQLALAQGLSPSPELTPAQSGVDASKDLAAPGWKPLFLDEH
Ga0062590_1006422372	3300004157	Soil	MKRREMIRGSVLAGAFAAALRPALANAQSGAQSAAQTSELTPAQKGVDASKDLSAPGWK
Ga0062595_1013692072	3300004479	Soil	MKRRELLRAGALAGAVAALRPPVGQVQSQTQNQAQGQELTPAQSGVDASNDLAAPG
Ga0066680_109510911	3300005174	Soil	MKRRDLIRGSVLAGAAAALRPTLATAQSAAQQLSELTPAQSGVDASKDL
Ga0066684_104868221	3300005179	Soil	MKRRELLRAGVLASAAAALPRTPALAQNTAPSPELTPAQSGVDASKDLAAPGWKPLFLDA
Ga0066685_102906141	3300005180	Soil	MKRRDLIRGSVLAGAAAVLRPSLATAQSAAQQPSELTPAQSGVDASKDLA
Ga0066685_110952781	3300005180	Soil	MKRRDFVRGSVLAGGAAVLRPSLATAQSAAQQPSELTPAQSGVDASKDLA
Ga0066671_105311152	3300005184	Soil	MKRRDLIRGSVLVGAAAALRPSLATAQSAAQQPSELTPAQRGVDASKDLAAPGWKPLFLDEHQNETLIVLSD
Ga0066388_1013272703	3300005332	Tropical Forest Soil	MKRRELLRASVFAGAAVAFPHRAAVAQSVTRASELTPAQSGVDASKDLEAPGWKPLFLDEHQNQTLILLS
Ga0066388_1049663761	3300005332	Tropical Forest Soil	MKRRELLKAGAFAGAVAALGPPMAQGQDTKANSELTPAQSGVDASNDLSAAGWKPKFLDEHQNETLILL
Ga0070709_113101641	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MKRRELLRAGVLTGAALALRPPSASGQNPATAPGSELTPAQRGVDASKDLAAAGWKPLLLDEHQNETLIVLS
Ga0070714_1008393941	3300005435	Agricultural Soil	MKRRELLRAGLLTGAAAALHPPRAQAQNTAPPSELTPAQSGVDASKDLSSPN
Ga0070701_110861701	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MKRRELLRAGVLAGAVAALRPPVGQVQSQTQNQAQGQELTPAQSGVDASN
Ga0070706_1014755352	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MKRRELIRRGVFAGAVAALRPGLRMAQGATQSADNAGPSELTPAQKGVDASTDLAGAGWKPLFLDEHQNETLIVLSDLM
Ga0066699_108950302	3300005561	Soil	MKRRELLRASVITGATAALGSSLSIAQTAAQTPAPTSELTPAQRGVDASNDLAAPGWKPLFLDEHQNET
Ga0066706_102057053	3300005598	Soil	MKRRELIRRGVFAGAVAALRPGLGMTHSGTQAAGTAGSSELTPAQSGVDASKDLAGAGWKPLFLDEHQNE
Ga0070762_112510521	3300005602	Soil	MKRREMLRAGVLVGAAAALHPALSNAQSGAQGTAPPSELTPAQSGVDASKD
Ga0068860_1027410162	3300005843	Switchgrass Rhizosphere	MKRRELLKAGAFAGAVAALRPPIVQAQDGKANAELTPAQSGVDASGDLAAPGWKPKFFDEHQ
Ga0066789_100146965	3300005994	Soil	MKRRDLLRAGVLTGAAAALRPPLAVAQNASQTTVAPSELTPAQRGIDASKDLAAPGWKPLFLDEHQNE
Ga0075029_1013072211	3300006052	Watersheds	MKRREMLRASVLAGAAAALSPALTDAQNGAQSTAQQPSELTPAQSGVDASKDLSAPGWKPLFLDEHQNETLI
Ga0075019_110909882	3300006086	Watersheds	MKRRELLRAGFLAGAAAALRPPVGKAQSATQSSELTPAQSGVDASKDLAAPGWKPLFLDEHQNETLIV
Ga0070716_1009395262	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MKRRELLRASVITGATAALGSSLSIAQNAAQTQAPTPELTPAQRGVDASNDLAAPGWKP
Ga0070712_1004081482	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MKRRDLLRVGVFTGAAAALVPPRASAQNRAPAQAAELTPAQRGVDASKDLAGPNWKPLFLDE
Ga0070765_1010141141	3300006176	Soil	MKRREMLRASVLVGAAAALRPALSNAQSGAQGTAPPSELTPAQSGVDASKDLAAPGWKPL
Ga0070765_1017805382	3300006176	Soil	MKRREMLRASVLAGAAAALSPALSNAQTGIQSGPQSPAPPSELTPAQSGVDASKDLSGPGWKPLFLDEHQNET
Ga0075021_107758751	3300006354	Watersheds	MKRRDLLRAGVLTGAAAALSAQKSLAQSPQQSAGAPPASELTPAQRGVDTSKDLAGPSWKPLFLDEHQNATLIILS
Ga0079220_107627142	3300006806	Agricultural Soil	MKRRDMIRASIFTGAAAAALRAPLAAAQNPPPPSELTPAQSGVDASKDLSSPNWKPLFLDDHQNE
Ga0075433_118578981	3300006852	Populus Rhizosphere	MKRRELLKAGAFAGAVAALHPTMAQAQDPKANAELTPAQSGVDASNDLAAPGWKPKFLDEHQNE
Ga0075425_1011422911	3300006854	Populus Rhizosphere	MKRRELLRAGAFAGAVAALRPPLGQAQNPAQGAELTPAQTGVDASNDLAAAGWKPLFLDEHQNETLIVL
Ga0075434_1021638091	3300006871	Populus Rhizosphere	MKRRELLRAGVIAGAAAAALRPSVTVAQDTKQTPSELTPAQSGADASNDLAAPNWKPLF
Ga0073928_112340261	3300006893	Iron-Sulfur Acid Spring	MKRRDLLRAGVLTGAAVALRPARAPAQSATQDAAQTPELTPAQRGVDASKDLAAPGWKPLFLDEHQNETLIVLS
Ga0075426_103321653	3300006903	Populus Rhizosphere	MKRRELLRAGVIAGAAAAALRPSVTVAQDTKQTPSELTPAQSGADASNDLAAPN
Ga0075426_104657311	3300006903	Populus Rhizosphere	MKRRELLRAGALAGAVAALRPPVGQVQSQTQNQAQGQELTPAQSGVDASNDLAAPGWK
Ga0075436_1004509502	3300006914	Populus Rhizosphere	MKRRELLKAGAFAGAVAALHPTMAEAQDTKANAELTPAQSGVDASNDLAAPGWKAKFLDEHQNETLIVLSD
Ga0066709_1042966341	3300009137	Grasslands Soil	MKRRELLRASVITGATAALGSSLSIAQTAAQAPAPTSELTPAQRGVDASNDLAAPGWKPLFLDEHQNETLIILSDLIIP
Ga0116214_14189701	3300009520	Peatlands Soil	MKRRELIRAGFLAGAAAALRPPLGKAQSAAQSSELTPAQSGVDAS
Ga0126380_101019372	3300010043	Tropical Forest Soil	MKRRELLRAGMITGAAAALSTSLASAQNAPQGAPQPDELTPAQKGVDASKDLAAPGW
Ga0074046_105235651	3300010339	Bog Forest Soil	MKRREMLRASVLAGAAAALSPALSNAQGGAQSGAQSPTQPSELTPAQSGVDASKDLSAPGWKPLFLD
Ga0126370_104419612	3300010358	Tropical Forest Soil	MKRRELLRASVVTGAAAALSASLSATQKQEQKPAEPNELTPAQRGIDASKDLSAPGWKPFFLDE
Ga0126370_106666501	3300010358	Tropical Forest Soil	MKRRELLKAGAFAGAVAALGPPMAQGQDTKANSELTPAQSGVDASNDLSAAGWKPKFL
Ga0126376_131212101	3300010359	Tropical Forest Soil	MKRRELLKAGAFAGAVATLRPSIGQAQDGKANAELTPAQSGVDASNDLAAPGWKPKFFDEHQNETLIVL
Ga0126372_120796262	3300010360	Tropical Forest Soil	MKRRELIRGGVLAGAVVALQPGARMGQNTPQAAATGQVSELTPAQSGVDAAKDLAAPGWKPRFLDEHQNETLIVLSDLM
Ga0126377_122177081	3300010362	Tropical Forest Soil	MKRRELLRATAITGAAAALSTSIPAAQKEEGKAVETTELTPAQRGIDASKDLSAPGWKPLFLDEHQNETLII
Ga0134126_103921811	3300010396	Terrestrial Soil	MKRREMIRGSVLAGAFAAALRPALANAQSGAQSAAQTSELTPAQKGVDASKDLSAP
Ga0150983_133642833	3300011120	Forest Soil	MKRRELIRAGFLAGAAAALRPPIGKAQSAAQSSELTPAQGGVDA
Ga0137364_108100642	3300012198	Vadose Zone Soil	MKRRDFVRGSVLAGGAAVLRPSLATAQSAAQQPSELTPAQSGVDASKDLAGPGWKPLFLD
Ga0137383_101360203	3300012199	Vadose Zone Soil	MKRRDFVRGSVLAGGAAVLRPSLATAQSAAQQPSELTPAQSGVDASKDLAGPGW
Ga0137363_112583742	3300012202	Vadose Zone Soil	MKRRDLLRAGVLTGAVAALQPPRSIAHATAQGSSAPSELTPAQRGIDASKDLGAPGWKPLFLDEHQN
Ga0137360_103507231	3300012361	Vadose Zone Soil	MKRRELIRAGFIAGAAAALRPSLGKAQSTLQSSELTPAQSGVDASKDLAAPG
Ga0137359_101213091	3300012923	Vadose Zone Soil	MKRRELIRGGVLAGAVAAALRPSVGMAQNATQATGTAGPSELTPAQSGVDASKDLAAPGWKPLFLDEHQNETLIV
Ga0137404_105539822	3300012929	Vadose Zone Soil	MKRRELIRRGVFAGAVAALRPGLGMTQSAAQAAGNAGSSELTPAQSGVDASKDLAGAGWKPLFLDE
Ga0126369_101261773	3300012971	Tropical Forest Soil	MKRRELLRASVITGAAAALGSSLSNAQSTAQGAPQPDELTPAQKGVDASKDLSAPGWKPLFLDEHQNETLIILSDLMIP
Ga0126369_110659591	3300012971	Tropical Forest Soil	MKRRELLRAGMITGAAAALSTSLTSAQNAPQAAPQPDELTPAQKGVDA
Ga0126369_136437311	3300012971	Tropical Forest Soil	MKRRELLKTGAFAGAVAALRPPFGQGQDAKSNTGLTPAQSGVDASNDLAAPGWKPKFLDEHQNETLIV
Ga0134110_100856711	3300012975	Grasslands Soil	MKRRDFVRGSVLAGGAAVLRPSLATAQSAAQQPSELTPAQSGVDASKDLAGPGWKPLF
Ga0134078_102472732	3300014157	Grasslands Soil	MKRRDLIRGSVLVGAAAALRPSLAAAQSVAQQPSELTPAQSGVDASK
Ga0173480_111813412	3300015200	Soil	MKRRELLKAGAFAGAVAALRPPVARGQDTKANTELTPAQSGVDASNDLAAPGWKPKFFDEHQ
Ga0210407_101460554	3300020579	Soil	MKRRDLIRAGVLTGTVAALRQPLSMAQDPAQASELTPAQRGVDASKELAGSGWKPLFLDEHQNETLIVL
Ga0210407_106271192	3300020579	Soil	MKRRELIRAGVLMGAAAALRPRRTMAQSAAQSSELTPAQSG
Ga0210399_100004261	3300020581	Soil	MKRRDLIRAGVLTGAAAALRPPLARAQIAAPPSELTPAQSGVDASKDLAAPGWKPLF
Ga0210399_105897692	3300020581	Soil	MKRRELIRAGILSGAVAAALRPRLTSAQGVSPSSELTPAQKGVDASKDLAAPGWKPLFLDEHQNET
Ga0210399_109400031	3300020581	Soil	MKRRELIRAGFLTGAAAALRPPLGTAQSTALSSELTPAQSGVDASKDLAAPGWKPLFL
Ga0210395_103817991	3300020582	Soil	MKRREMLRTSVLAGAAAALRPALANAQGTAQNAAPPSELTPAQSGVDASKELEGAGWKPLFLDQHQN
Ga0210395_112781341	3300020582	Soil	MKRRELIRAGILSGAVAAALRPQLALAQAASPSSELTPAQRGV
Ga0210401_109683291	3300020583	Soil	MKRREMLRASVLAGAAAALSPALSNAQSGTQNGAQSPAPSSELTPAQRGVDASKE
Ga0215015_107752761	3300021046	Soil	MKRRELIRAGVFAGAVAALRPPHGMAQSAGQSSELTPAQSGVDASKDLAAPGWKPLFLDEHQNETLIVLSDLTVS
Ga0210406_105231522	3300021168	Soil	MKRREMLRASVLAGAAAALRPVVSNGHSGAQSSVQPSELTPAQSGVDASKDLSAPGWKPLFLDEHQNETLIVLSDL
Ga0210396_102341751	3300021180	Soil	MKRREMLRASVLAGAAAALRPALSSAQSGAQGNAPLPELTPAQNGVDASK
Ga0210393_110147882	3300021401	Soil	MKRRELLRAGAFAGAVAALRTPLAVPQSATKSPELTPAQSGVDASQDLANPNWKPLFLADHQNE
Ga0210386_101250471	3300021406	Soil	MKRREMLRASVLAGAAAALRPVVSNAQSGAQSSVQPSELTPAQSGVDASKDLAAPGWKPLFLDEHQ
Ga0210394_117221512	3300021420	Soil	MKRREMLRASVLAGAAAALRPAIVNAQSGTQSAGQQPSELTPAQSGVDASK
Ga0210402_108747512	3300021478	Soil	MNRRDLLRASVLTGAVAALRSPAAIGQSPQQPSELTPAQSGVDSSKDLASPNWKPLFLNEHQNET
Ga0210402_119083481	3300021478	Soil	MKRRELIRAGFLAGAAAALRPPLGKAQSAAQSTELTPAQGGVDA
Ga0210409_101021911	3300021559	Soil	MKRRDLLRAGVLTGAAVALRPPRSTAQSGAQDAAQTAELTPAQRGVDASKELAAPGWKPLFLDE
Ga0242660_12229471	3300022531	Soil	MKRRELIRAGFLAGAAAALRPSVGKAQSAAQSSELTPAQSGVDASKDLAAPGWKPLFL
Ga0212123_106208902	3300022557	Iron-Sulfur Acid Spring	MKRRDLLRAGVLTGAAVALRPARAPAQSATQDAAQTPELTPAQRGVDASKDL
Ga0224551_10462471	3300023259	Soil	MKRRDLLRAGVLTGAAAALRSPLAVGQSAAQDPASELTPAQRGVDASKDLAAPGWKP
Ga0247669_10509453	3300024182	Soil	MKRRELLRASVITGAAAALGTSLSATQNPAQDSTPASELTPAQRGLDASNDLAAPGWKP
Ga0207660_110339921	3300025917	Corn Rhizosphere	MKRREMIRGSVLAGAFAAALRPALANAQSGAQSAAQTSELTPAQKGVDASKDLSAPGWKPVFLDEH
Ga0209240_12228831	3300026304	Grasslands Soil	MKRRELIRAGFIAGAAAALRPSLAKAQSAAQSSELTPAQSGVDASKDLTAPGWKPLFLD
Ga0209239_12490621	3300026310	Grasslands Soil	MKRRELLRASVITGATAALGSSLSIAQTAAQAPAPTSELTPAQRGVDASNDLAAPGWKPLFLDEHQNE
Ga0209154_11382492	3300026317	Soil	MKRRDLIRGSVLAGAAAALRPSLAAAQSVAQQPSELTPAQSGVDASKDLAAPGWKPLFLDEHQNETLIV
Ga0209473_12601211	3300026330	Soil	MKRRELLRAGVLASAAAALPRTPALAQNTAPSPELTPAQSGVDASKDLAAPGWKPLFLD
Ga0257171_10838221	3300026377	Soil	MKRRELLRAGVLTGATAALTSSLSMAQSAAQTSAQSSELTPAQRGVDASNDLSAPGWKPLFLDEHQSETLTILSDLIIP
Ga0257156_11256951	3300026498	Soil	MKRRDLLRAGVLTGATAALTSSLSMAQSAAQTTPQSSELTPAQRGVDASNDLSAPGWKPLFL
Ga0209160_11569891	3300026532	Soil	MKRRELLRAGVLASAAAALPRTPALAQNTAPSPELTPAQSGVDASKDLAAPGWKPLFLDAHQNETLI
Ga0209729_10525741	3300027061	Forest Soil	MKRRELLRAGVLASAAAALPRTPALAQNTAPSPELTPAQSGVDASKDLAAPGWKPLFLDAHQNETLIVLS
Ga0209214_10094402	3300027071	Forest Soil	MKRRELLRAGVLASAAAALPRTPALAQNTAPSPELTPAQSGVDASKDLAAPG
Ga0209772_101638152	3300027768	Bog Forest Soil	MKRRELIRAGVLSGAVAAALHPRLALAQGGSPSPSSELTPAQSGVDASKDLAAPGWKPLFLDEHQNETLI
Ga0170823_122260472	3300031128	Forest Soil	MKRRELIRAGFIAGAAAALRPPLVKAQSAAQSSELTPAQSGR
Ga0307474_101816993	3300031718	Hardwood Forest Soil	MKRRELIRAGVLSGAVAAALQPKLALAQGVSPSSELTPAQSGVDASKDLAAPGWKPLFLDEHQ
Ga0307469_101871372	3300031720	Hardwood Forest Soil	MKRRELLKAGAFAGAVAALRPPVAQGQDTKANTELTPAQSGVDASNDLAAPGWKPKFLDEHQNQTLIVLSDLII
Ga0307469_115424252	3300031720	Hardwood Forest Soil	MKRRELLQAGAFAGAVAVLRPPLGQAQNPTQGAELTPAQTGVDASNDLAAAGWKPLFLDEHQ
Ga0318546_102460751	3300031771	Soil	MKRRELLKAGAFAGAVAAFGPPRVEGQDSKANSELTPAQSGMDASNDLAAPGWKPKFFDEHQNETLIVLS
Ga0318568_102480072	3300031819	Soil	MKRRELLKAGAFAGAVAAFGPPRVEGQDSKANSELTPAQSGVDASNDLAAPGWKPKFFDEHQNETLIVLSDLII
Ga0310913_103030391	3300031945	Soil	MKRRELLKAGAFAGAVAAFGPPRVEGQDSKANSELTPAQSGVDASNDLAAPGWKPKFFDEHQNETLIVLSDLIIPAT
Ga0307479_106224143	3300031962	Hardwood Forest Soil	MKRRELLRASVITGATAALGSSLSIAQPAAQTPAPTSQLTPAQRGIDASNDLAAPGWKPLFLDEHQN
Ga0307470_119011981	3300032174	Hardwood Forest Soil	MKRRELLRAGAVAGAVAALRPPLAAPQTAAKSPELTPAHSGDDASQDRTNPKWKPLYLDDQQNATLI
Ga0307471_1022633051	3300032180	Hardwood Forest Soil	MKRRELLRAGAVAGAVAALRPPLAAPQTAAKSPELTPAQSGVDASQDLTNPNWKPL
Ga0335081_117648831	3300032892	Soil	MKRRELIRAGMFAGAVAAIHPPVVGAQSAQSAIPAPPDSQLTPAQRGVDASSDLAAANWKPLFLD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters