NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F092573

Metagenome / Metatranscriptome Family F092573

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F092573
Family Type Metagenome / Metatranscriptome
Number of Sequences 107
Average Sequence Length 61 residues
Representative Sequence MTETATATAPAEPDISPVPDVCGHFVVGAVGVAEEGGAGEAPGVAYGGRFAPEALMAA
Number of Associated Samples 101
Number of Associated Scaffolds 107

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 100.00 %
% of genes near scaffold ends (potentially truncated) 97.20 %
% of genes from short scaffolds (< 2000 bps) 94.39 %
Associated GOLD sequencing projects 98
AlphaFold2 3D model prediction Yes
3D model pTM-score0.22

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (50.467 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(24.299 % of family members)
Environment Ontology (ENVO) Unclassified
(27.103 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(41.121 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Fibrous Signal Peptide: No Secondary Structure distribution: α-helix: 4.65%    β-sheet: 0.00%    Coil/Unstructured: 95.35%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.22
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 107 Family Scaffolds
PF00218IGPS 91.59
PF00486Trans_reg_C 6.54
PF09534Trp_oprn_chp 0.93
PF00480ROK 0.93

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 107 Family Scaffolds
COG0134Indole-3-glycerol phosphate synthaseAmino acid transport and metabolism [E] 91.59
COG1940Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domainTranscription [K] 1.87


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms50.47 %
UnclassifiedrootN/A49.53 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300003505|JGIcombinedJ51221_10123938All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura oligospora1037Open in IMG/M
3300004157|Ga0062590_101624908Not Available655Open in IMG/M
3300005163|Ga0066823_10077265Not Available649Open in IMG/M
3300005167|Ga0066672_10357093All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia954Open in IMG/M
3300005332|Ga0066388_104093224All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura743Open in IMG/M
3300005332|Ga0066388_107893439Not Available532Open in IMG/M
3300005434|Ga0070709_10347206All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1095Open in IMG/M
3300005459|Ga0068867_100185460All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1657Open in IMG/M
3300005546|Ga0070696_100095764All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2120Open in IMG/M
3300005587|Ga0066654_10187364All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1069Open in IMG/M
3300005598|Ga0066706_10442383All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1035Open in IMG/M
3300006046|Ga0066652_100230882All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales1610Open in IMG/M
3300006173|Ga0070716_101055017All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia646Open in IMG/M
3300006175|Ga0070712_101884819Not Available523Open in IMG/M
3300006581|Ga0074048_13393684All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia980Open in IMG/M
3300006603|Ga0074064_11818508All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura oligospora627Open in IMG/M
3300006903|Ga0075426_10393189All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1022Open in IMG/M
3300006914|Ga0075436_101113363Not Available595Open in IMG/M
3300007255|Ga0099791_10622947Not Available528Open in IMG/M
3300007258|Ga0099793_10712782Not Available506Open in IMG/M
3300009177|Ga0105248_10447666All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1455Open in IMG/M
3300009545|Ga0105237_11069957All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia813Open in IMG/M
3300010048|Ga0126373_11600531Not Available716Open in IMG/M
3300010326|Ga0134065_10429105Not Available536Open in IMG/M
3300010358|Ga0126370_10716824All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Phytohabitans → Phytohabitans rumicis881Open in IMG/M
3300010360|Ga0126372_12075282Not Available616Open in IMG/M
3300010366|Ga0126379_13109340All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia556Open in IMG/M
3300010371|Ga0134125_11637844Not Available700Open in IMG/M
3300010861|Ga0126349_1208050Not Available543Open in IMG/M
3300010876|Ga0126361_10633242Not Available554Open in IMG/M
3300011269|Ga0137392_10010537All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales6118Open in IMG/M
3300012096|Ga0137389_10777760All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Phytohabitans → Phytohabitans rumicis822Open in IMG/M
3300012203|Ga0137399_10278543All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura1377Open in IMG/M
3300012206|Ga0137380_10596311All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia966Open in IMG/M
3300012207|Ga0137381_10010370All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia7108Open in IMG/M
3300012211|Ga0137377_10418694All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1278Open in IMG/M
3300012285|Ga0137370_10788233Not Available590Open in IMG/M
3300012356|Ga0137371_10612772All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia836Open in IMG/M
3300012357|Ga0137384_11397609Not Available548Open in IMG/M
3300012362|Ga0137361_11124133Not Available707Open in IMG/M
3300012499|Ga0157350_1023249Not Available638Open in IMG/M
3300012989|Ga0164305_11877047All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia543Open in IMG/M
3300013296|Ga0157374_12000812Not Available606Open in IMG/M
3300014154|Ga0134075_10401480Not Available605Open in IMG/M
3300014969|Ga0157376_10885305All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia910Open in IMG/M
3300014969|Ga0157376_11201202Not Available786Open in IMG/M
3300015374|Ga0132255_101379911All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1064Open in IMG/M
3300016270|Ga0182036_10081556All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales2143Open in IMG/M
3300016319|Ga0182033_10291547All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1343Open in IMG/M
3300017974|Ga0187777_11357567Not Available523Open in IMG/M
3300017999|Ga0187767_10280370Not Available561Open in IMG/M
3300018037|Ga0187883_10234439All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia940Open in IMG/M
3300018058|Ga0187766_10477024All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Phytohabitans → Phytohabitans rumicis836Open in IMG/M
3300018433|Ga0066667_11374001Not Available619Open in IMG/M
3300018482|Ga0066669_10930803Not Available780Open in IMG/M
3300018482|Ga0066669_11952571Not Available548Open in IMG/M
3300020170|Ga0179594_10131014All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia919Open in IMG/M
3300021362|Ga0213882_10254523Not Available728Open in IMG/M
3300021384|Ga0213876_10497793Not Available648Open in IMG/M
3300021402|Ga0210385_11261321Not Available567Open in IMG/M
3300021415|Ga0193694_1013245All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1120Open in IMG/M
3300021432|Ga0210384_11361002Not Available615Open in IMG/M
3300021475|Ga0210392_11209080Not Available566Open in IMG/M
3300021560|Ga0126371_13672284Not Available518Open in IMG/M
3300022525|Ga0242656_1014022All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1119Open in IMG/M
3300022533|Ga0242662_10285011All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia546Open in IMG/M
3300022726|Ga0242654_10072919All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1025Open in IMG/M
3300024249|Ga0247676_1039411Not Available764Open in IMG/M
3300025915|Ga0207693_10913278Not Available673Open in IMG/M
3300025922|Ga0207646_11524935Not Available578Open in IMG/M
3300025929|Ga0207664_11181253Not Available683Open in IMG/M
3300025934|Ga0207686_11273565Not Available603Open in IMG/M
3300025944|Ga0207661_11152080Not Available714Open in IMG/M
3300026308|Ga0209265_1037188All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1506Open in IMG/M
3300026999|Ga0207949_1011047All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia817Open in IMG/M
3300028792|Ga0307504_10334178Not Available579Open in IMG/M
3300030623|Ga0265392_1231317Not Available527Open in IMG/M
3300031170|Ga0307498_10130258All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia812Open in IMG/M
3300031474|Ga0170818_102332509All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia989Open in IMG/M
3300031720|Ga0307469_10552072All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1020Open in IMG/M
3300031736|Ga0318501_10137932All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1247Open in IMG/M
3300031736|Ga0318501_10709968All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria555Open in IMG/M
3300031751|Ga0318494_10208171All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1115Open in IMG/M
3300031770|Ga0318521_10975416Not Available519Open in IMG/M
3300031779|Ga0318566_10063673All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1772Open in IMG/M
3300031794|Ga0318503_10081800All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1014Open in IMG/M
3300031795|Ga0318557_10325994Not Available705Open in IMG/M
3300031798|Ga0318523_10088301All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1509Open in IMG/M
3300031890|Ga0306925_10818021All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia965Open in IMG/M
3300031912|Ga0306921_10319443All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1817Open in IMG/M
3300031959|Ga0318530_10297522Not Available667Open in IMG/M
3300032008|Ga0318562_10886066Not Available509Open in IMG/M
3300032009|Ga0318563_10586666Not Available601Open in IMG/M
3300032009|Ga0318563_10587975Not Available600Open in IMG/M
3300032041|Ga0318549_10374645Not Available642Open in IMG/M
3300032054|Ga0318570_10242247All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria817Open in IMG/M
3300032063|Ga0318504_10165985Not Available1022Open in IMG/M
3300032066|Ga0318514_10386629All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Phytohabitans → Phytohabitans rumicis742Open in IMG/M
3300032067|Ga0318524_10078614All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae1612Open in IMG/M
3300032076|Ga0306924_10690589All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Phytohabitans → Phytohabitans rumicis1147Open in IMG/M
3300032805|Ga0335078_11794918Not Available667Open in IMG/M
3300032898|Ga0335072_10333094All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1675Open in IMG/M
3300032898|Ga0335072_11516149Not Available571Open in IMG/M
3300033290|Ga0318519_10638538Not Available648Open in IMG/M
3300034819|Ga0373958_0168879Not Available557Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil24.30%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil12.15%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere5.61%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil4.67%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil4.67%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil4.67%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil3.74%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil2.80%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil2.80%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil2.80%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland2.80%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere2.80%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland1.87%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil1.87%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil1.87%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil1.87%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere1.87%
Boreal Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil1.87%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.93%
Unplanted SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil0.93%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.93%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.93%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.93%
BogEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Bog0.93%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.93%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil0.93%
Exposed RockEnvironmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock0.93%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.93%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.93%
Plant RootsHost-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots0.93%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.93%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.93%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.93%
Rhizosphere SoilHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil0.93%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300003505Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)EnvironmentalOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300005163Soil and rhizosphere microbial communities from Laval, Canada - mgHMBEnvironmentalOpen in IMG/M
3300005167Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121EnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005434Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaGEnvironmentalOpen in IMG/M
3300005459Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2Host-AssociatedOpen in IMG/M
3300005546Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaGEnvironmentalOpen in IMG/M
3300005587Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103EnvironmentalOpen in IMG/M
3300005598Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155EnvironmentalOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006173Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaGEnvironmentalOpen in IMG/M
3300006175Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaGEnvironmentalOpen in IMG/M
3300006581Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006603Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMC (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006903Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5Host-AssociatedOpen in IMG/M
3300006914Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5Host-AssociatedOpen in IMG/M
3300007255Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1EnvironmentalOpen in IMG/M
3300007258Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3EnvironmentalOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300009545Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaGHost-AssociatedOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300010326Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300010861Boreal forest soil eukaryotic communities from Alaska, USA - C4-5 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300010876Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012285Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012356Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012357Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012499Unplanted soil (control) microbial communities from North Carolina - M.Soil.2.yng.030610EnvironmentalOpen in IMG/M
3300012989Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MGEnvironmentalOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300014154Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015EnvironmentalOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300016270Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080EnvironmentalOpen in IMG/M
3300016319Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00HEnvironmentalOpen in IMG/M
3300017974Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MGEnvironmentalOpen in IMG/M
3300017999Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_10_MGEnvironmentalOpen in IMG/M
3300018035Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10EnvironmentalOpen in IMG/M
3300018037Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10EnvironmentalOpen in IMG/M
3300018058Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MGEnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300019787Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (PacBio error correction)EnvironmentalOpen in IMG/M
3300020170Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300021362Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R09EnvironmentalOpen in IMG/M
3300021384Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9Host-AssociatedOpen in IMG/M
3300021402Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-OEnvironmentalOpen in IMG/M
3300021415Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3s1EnvironmentalOpen in IMG/M
3300021432Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-MEnvironmentalOpen in IMG/M
3300021475Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-OEnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300022525Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022533Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022726Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300024249Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK17EnvironmentalOpen in IMG/M
3300025915Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025929Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025934Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025944Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026308Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103 (SPAdes)EnvironmentalOpen in IMG/M
3300026999Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF044 (SPAdes)EnvironmentalOpen in IMG/M
3300028792Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_SEnvironmentalOpen in IMG/M
3300030623Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO144-ARE043SO (Eukaryote Community Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300031170Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_SEnvironmentalOpen in IMG/M
3300031474Fir Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031736Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21EnvironmentalOpen in IMG/M
3300031751Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24EnvironmentalOpen in IMG/M
3300031770Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17EnvironmentalOpen in IMG/M
3300031779Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22EnvironmentalOpen in IMG/M
3300031794Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23EnvironmentalOpen in IMG/M
3300031795Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19EnvironmentalOpen in IMG/M
3300031798Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19EnvironmentalOpen in IMG/M
3300031890Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)EnvironmentalOpen in IMG/M
3300031912Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)EnvironmentalOpen in IMG/M
3300031959Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24EnvironmentalOpen in IMG/M
3300032008Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18EnvironmentalOpen in IMG/M
3300032009Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19EnvironmentalOpen in IMG/M
3300032041Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22EnvironmentalOpen in IMG/M
3300032054Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23EnvironmentalOpen in IMG/M
3300032063Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17EnvironmentalOpen in IMG/M
3300032066Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18EnvironmentalOpen in IMG/M
3300032067Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22EnvironmentalOpen in IMG/M
3300032076Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)EnvironmentalOpen in IMG/M
3300032805Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2EnvironmentalOpen in IMG/M
3300032898Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1EnvironmentalOpen in IMG/M
3300033290Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15EnvironmentalOpen in IMG/M
3300034819Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_1Host-AssociatedOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGIcombinedJ51221_1012393813300003505Forest SoilLRSSYFLEQTPAAEPDIAPVPDLSGHFVVGAVGVAEEGGAQQTPGVAYGGRFAPEALMAALEEL
Ga0062590_10162490813300004157SoilMTETATAREHAAPAEPDISPVPDVWGHFVVGAVGVAEEGGTGEAPGVAYGGRF
Ga0066823_1007726513300005163SoilMTETATTAGPAEPDISPVPDASGHFVVGAVGVAEEGGACEAPGVAYGGRFAPEALMAAL
Ga0066672_1035709323300005167SoilLTETATAQAPAAPAEPDISPVPDIGGHFVVGAVGIAEVGGTGEAPGVAYGGRFAPE
Ga0066388_10409322423300005332Tropical Forest SoilMTETATAAGPAEPDISPVPDTSGHFVVGAVGVAEEGGAGEAPGVAYGGRFAPEALMAALDELTAA
Ga0066388_10789343923300005332Tropical Forest SoilLTTQTATDHVQPAGPAEPDVGPVPDADGHFVVGAVGVAEAGGAGEAPGVAYGGRFAPE
Ga0070709_1034720623300005434Corn, Switchgrass And Miscanthus RhizosphereMTELVTAPGHHAPAAEPDISPVPDVAGHFVVGAVGIAEEGGADEVPGVAYGGRFAPEALIPALDELAAAYEQ
Ga0068867_10018546013300005459Miscanthus RhizosphereLTEIATAQAPAAPAEPDISPVPDIGGHFVVGAVGVAEEGGTGEAPGVAYGGRFAPEALTAALDELTAAYEQA
Ga0070696_10009576443300005546Corn, Switchgrass And Miscanthus RhizosphereMTETATPAAPAEPDISPVPDVWGHFVVGAVGVAEEGGAGEAPGVAYGGRFAPEA
Ga0066654_1018736423300005587SoilMTETVPHPAPAEPDISPVPDVWGHFVVGAVGVAEKGGAGEAPGVAYGGRFAPEALMAALDELTAAYE
Ga0066706_1044238323300005598SoilLTETATAQAPAAPAEPDISPVPDIGGHFVVGAVGIAEVGGTGEAPGVAYGGRFA
Ga0066652_10023088233300006046SoilMTETATAQAPAAPAEPDISPVPDIAGHFVVGAVGVAEVGGTGEAPGVAYGGRFAPEAL
Ga0070716_10105501723300006173Corn, Switchgrass And Miscanthus RhizosphereLTAHTATAHAQPAGPAEPDIGPVPDADGHFVVGAVGVAEAGGAREAPGVAYGGRF
Ga0070712_10188481923300006175Corn, Switchgrass And Miscanthus RhizosphereLTETVAASGHHAPAAEPDISPVPDAAGHFVVGAVGIAEEGGASEAPGVAYGGRFAPEALIPALD
Ga0074048_1339368413300006581SoilLTEIATAQAPAAPAEPDISPVPDVWGHFVVGAVGVAEEGGTDEAPGVAYGGRFAP
Ga0074064_1181850813300006603SoilLTETATAREHAEPAEPDISPVPDVWGHFVVGAVGVAEEGGTGEAPGVAYGGRFAPEALTAALDELTA
Ga0075426_1039318923300006903Populus RhizosphereMTETATAREHAAPAEPDICPVPDVWGHFVVGAVGVAEEGGTGEVPGVAYGGRFAPEALTAALDELTAAY
Ga0075436_10111336313300006914Populus RhizosphereMTETVTASGHHAPAAEPDISPVPDVAGHFVVGAVGIAEEGGASEAPGVAYGGRFAPE
Ga0099791_1062294723300007255Vadose Zone SoilMTETATASGPAEPDISPVPDVWGHFVVGAVGVAEEGGAGEAPGVAYGGRFAPE
Ga0099793_1071278213300007258Vadose Zone SoilLTETATAQAPAAPAEPDISPVPDTGGHFVVGAVGVAEVGGTGEAPGVAYGGRFAPEA
Ga0105248_1044766633300009177Switchgrass RhizosphereLTEIATAQAPAAPAEPDISPVPDIGGHFVVGAVGVAEEGGTGEAPGVAYGGRFAPEALTA
Ga0105237_1106995723300009545Corn RhizosphereLTEIATAQAPAAPAEPDISPVPDIGGHFVVGAVGVAEEGGTGEAPGVA
Ga0126373_1160053113300010048Tropical Forest SoilMTETATAAGPAEPDISPVPDASGHFVVGAVGIAEEGGACEAPGVAYGGRFAPEAL
Ga0134065_1042910513300010326Grasslands SoilMTETATASGPAEPDISPVPDVWGHFVVGAVGVAEEGGAGEAPGVAYGGRFAPEALMAA
Ga0126370_1071682413300010358Tropical Forest SoilMTKTATAAGPAEPDISPVPDTSGHFVVGAVGVAEVGGAGEAPGVAYGGRF
Ga0126372_1207528213300010360Tropical Forest SoilMTETATVAGPAEPDISPVPDVWGHFVVGAVGVAEEGGTGEAPGVAYGGRFAPEAL
Ga0126379_1310934023300010366Tropical Forest SoilMTETATAAGPAEPDISPVPDASGHFVVGAVGIAEEGGASEAPGVAYGGRFAPEALIPALDELA
Ga0134125_1163784413300010371Terrestrial SoilMTETVTAPGHHAPAAEPDISPVPDVAGHFVVGAVGIAEVGGTGEAPGVAYGGRFAPEALMAALEELTAAY
Ga0126349_120805023300010861Boreal Forest SoilLTETATAQAPAAPAEPDISPVPDIGGHFVVGAVGIAEVGGTGEAPGVAYGGRFAPEALMAALEELTA
Ga0126361_1063324213300010876Boreal Forest SoilLTETTTTAERHAQPAEPDISPVPDVSGHFVVGAVGVAEEGGACEAPGVAYGGRFA
Ga0137392_1001053713300011269Vadose Zone SoilLTGTVTTRAQQAQQTQPAQQARPSGPAEPDIAPVPDVSGHFVVGAVGVAEEGGACEAPGVAYGGRFAPEALMA
Ga0137389_1077776013300012096Vadose Zone SoilVTSSTAQHARPAEPDIAPVPDADGHFVVGAVGVAEQGGARPSPGVAYGGRFAPE
Ga0137399_1027854313300012203Vadose Zone SoilLTETATAQAPAAPAEPDISPVPDTGGHFVVGAVGVAEVGGTGEAPGVA
Ga0137380_1059631113300012206Vadose Zone SoilLTETATAREHAEPAEPDISPVPDVWGHFVVGAVGVAEEGGTGEAPGVAYGGRFAPEALTAALDELTAAYEQARR
Ga0137381_1001037013300012207Vadose Zone SoilLNDTATALAQSALPARPAEPDIAPVPDADGHFVVGAVGVAEVGGAGEAPGVAYGGRF
Ga0137377_1041869433300012211Vadose Zone SoilMTETATAQAPAAPAEPDISPVPDIEGHFVVGAVGVAEVGGTGEAPGVAYGGRFAPEALMAALEEL
Ga0137370_1078823323300012285Vadose Zone SoilLTETTTAREHAAPAEPDISPVPDVWGHFVVGAVGVAEEGGTGEAPGVAYGGRFAPEALTAALDELTAAYE
Ga0137371_1061277223300012356Vadose Zone SoilLTETATAREHAEPAEPDISPVPDVWGHFVVGAVGVAEEGGTGEAPGVAYGGRFAPEALMAALEELTAAYEQAR
Ga0137384_1139760913300012357Vadose Zone SoilLTDMTTALAQSAQPARPAEPDIAPVPDADGHFVVGAVGIAEEGGAGEAPGVAYGGR
Ga0137361_1112413313300012362Vadose Zone SoilMTETATASGPAEPDISPVPDGWGHFVVGAVGVAEKGGAGEAPGVAYGGRF
Ga0157350_102324913300012499Unplanted SoilLTEIATAQAPAAPAEPDISPVPDIGGHFVVGAVGVAEEGGTGEAPGVAYGGRFAPE
Ga0164305_1187704713300012989SoilLTETATAQAPAAPAEPDISPVPDIGGHFVVGAVGVAEVGGTDEAPGVAYGGRFA
Ga0157374_1200081213300013296Miscanthus RhizosphereLTEIVTAPGQHAPAAEPDISPVPDAAGHFVVGAVGIAEEGGAGEAPGVAYGGR
Ga0134075_1040148023300014154Grasslands SoilMTETATASGPAEPDISPVPDVWGHFVVGAVGVAEEGGAGEAPGVAYGGRFA
Ga0157376_1088530523300014969Miscanthus RhizosphereLTEIATAQAPAAPAEPDISPVPDIGGHFVVGAVGVAEEGGTGEAPGVAYGGRFAPEALTAALDELT
Ga0157376_1120120213300014969Miscanthus RhizosphereMTETVTAPGHHAPAAEPDISPVPDVAGHFVVGAVGIAEEGGASEAPGVAYGG
Ga0132255_10137991123300015374Arabidopsis RhizosphereMTETATAREHAAPAEPDISPVPDVWGHFVVGAVGVAEEGGTGEAPGVAYGGRFAPEALMAALEELTAAY
Ga0182036_1008155643300016270SoilMTETATATAPAEPDISPVPDVCGHFVVGAVGVAEEGGAGEVPGVAYGGRFAPEALMAALDELTAAYEQA
Ga0182033_1029154713300016319SoilMTETATATAPAEPDISPVPDASGHFVVGAVGIAEEGGACEAPGVAYGGRFAPEALMAAL
Ga0187777_1135756713300017974Tropical PeatlandLTDIVTAEAAHAYPAEPDVAPVPDADGHFVVGAVGVAEEGGACEAPGVAYGGRFAPEALMAALDELTAA
Ga0187767_1028037023300017999Tropical PeatlandLTETVTAQAPASQQGTPHAGPAEPDIAPVPDVMGHFVVGAVGVAEEGGAGEAPGVAYGGRFAPEA
Ga0187875_1024229513300018035PeatlandMTETATAPSNRDAGPARHAGPAEPDIAPVPDMSGHFVVGAVEAIGHADPGGAPQAPA
Ga0187883_1023443913300018037PeatlandMTETVTASGHHAQAAEPDICPVPDVAGHFVVGAVGIAEEGGAREAPGVAYGGRFAPEALIPA
Ga0187766_1047702423300018058Tropical PeatlandMTTVRPAEHAGPAEPDIAPVPDASGHFVVGAVGVAEEGGACEAPGVAYGGRFAPEALMTALDELAAA
Ga0066667_1137400123300018433Grasslands SoilMTEMVTAPGHAPAAEPDISPVPDVAGHFVVGAVGIAEEGGASEAPGVAYG
Ga0066669_1093080313300018482Grasslands SoilMTETATAREHAAPAEPDISPVPDVWGHFVVGAVGVAEEGGTGEAPGVAYGGRFAPEALTAALDELT
Ga0066669_1195257123300018482Grasslands SoilLTETVTAPGHHAPAAEPDISPVPDAAGHFVVGAVGIAEEGGAGEAPGVAYGGRFAPEALIPALDELAAAYEQAR
Ga0182031_116738913300019787BogMTETATAPSTQDAGPARHAGPAEPDIAPVPDMSGHFVVGAVEAVGHADPGGAPMAPAVPGVGRLRRPVCSGSADG
Ga0179594_1013101423300020170Vadose Zone SoilLTETATAREHAEPAEPDISPVPDVWGHFVVGAVGVAEEGGTGEAPGVAYGGRFAPEAL
Ga0213882_1025452323300021362Exposed RockMTGAVTAGARRAEAAEPDIAPVPDTAGHFVVGAVGVAEHGGAGEAPGVAYGGRFAPEALMTALDELTAA
Ga0213876_1049779323300021384Plant RootsMTGAVTAGARRAEAAEPDIAPVPDTAGHFVVGAVGVAEHGGAGEAPGVAY
Ga0210385_1126132113300021402SoilMTDTATAAGPAEPDIAPVPDVCGHFVVGAVGVAEEGGASEAPGVAYGGRFAPEALMAALDELAAA
Ga0193694_101324513300021415SoilLTEIATAQAPAAPAEPDISPVPDIGGHFVVGAVGVAEEGGTGEAPGVAYGGRFAPEALMA
Ga0210384_1136100223300021432SoilMTDTATAAGPAEPDIAPVPDVCGHFVVGAVGVAEEGGAGEAPGVAYGGRFAPEALMAA
Ga0210392_1120908013300021475SoilMTETVAAGERHAQPAEPDISPVPDVSGHFVVGAVGVAEEGGAGEAPGVAYGGRFAPEALIPALDELAAAYEQAR
Ga0126371_1367228413300021560Tropical Forest SoilMTDTAEHAAQANHAGPAEPDIAPVPDVDGHFVVGAVGVAEEGGACESPGVAYGGRFAPEALMAA
Ga0242656_101402223300022525SoilMTETATAQASAAQEQGTPPPAPAEPDISPVPDVWGHFVVGAVGVAEEGGAGEVTGVAYGGRFA
Ga0242662_1028501113300022533SoilLTETATAQAPAAPAEPDISPVPDIGGHFVVGAVGIAEVGGTGEAPGVAYGGRFAPEALMAAL
Ga0242654_1007291913300022726SoilMTETATAQVPAPAEPDISPVPDVWGHFVVGAVGVAEEGGAGEAPGVAYGGRFAPEALMAALDELTA
Ga0247676_103941123300024249SoilLTEIATAQAPAAPAEPDISPVPDIGGHFVVGAVGVAEEGGTGEAPGVAYGGRFAPEALTAALDELTAA
Ga0207693_1091327813300025915Corn, Switchgrass And Miscanthus RhizosphereLTETVAASGHHAPAAEPDISPVPDAAGHFVVGAVGIAEEGGASETPGVAYGG
Ga0207646_1152493513300025922Corn, Switchgrass And Miscanthus RhizosphereLTEIATAQAPAAPAEPDISPVPDIGGHFVVGAVGGAEEGGTGEAPGVAYG
Ga0207664_1118125323300025929Agricultural SoilMTETATAQVPAPAEPDISPVPDVWGHFVVGAVGVAEEGGAGEAPGVAYGGRFAPEALIAALDELT
Ga0207686_1127356513300025934Miscanthus RhizosphereLTEIATAQAPAAPAEPDISPVPDIGGHFVVGAVGVAEEGGTGEAPGVAYGGRFAPEALM
Ga0207661_1115208023300025944Corn RhizosphereMAETVTAPGHHAPAAEPDISPVPDVAGHFVVGAVGIAEEGGASEAPGVAYGGRFAPEALIPALDELAAAYEQA
Ga0209265_103718813300026308SoilMTETVPHPAPAEPDISPVPDVWGHFVVGAVGVAEKGGAGEAPGVAYGGRFAPEALTAALDELTAAYEQARAAHQLGA
Ga0207949_101104713300026999Forest SoilLRSSYFLEQTPAAEPDIAPVPDLSGHFVVGAVGVAEEGGAQQTPGVAYGGRFAPEAL
Ga0307504_1033417813300028792SoilMTETAMAQASAAQEPVSQEPVSQEQGAPHPEPAEPDISPVPDVWGHFVVGAVGVAEEGGAGEVPGVAYGGRFAPEALMAAL
Ga0265392_123131723300030623SoilMTETATRHAGPAEPDIAPVPDISGHFVVGAVEAVGSAQPGGAPLTPAVPGVAYGGRFAPEALMAALEK
Ga0307498_1013025823300031170SoilLTEIATAQAPAAPAEPDISPVPDIGGHFVVGAVGVAEEGGTGEAPGVAYGGRFAPEALTAALDELTA
Ga0170818_10233250923300031474Forest SoilMTETATAQAPAPAEPDISPVPDVWGHFVVGAVGVAEEGGAGEAPGVAYGGRF
Ga0307469_1055207213300031720Hardwood Forest SoilLTETATAQAPAAPAEPDISPVPDIAGHFVVGAVGVAEVGGTGEAPGVAYGGRF
Ga0318501_1013793233300031736SoilMTETATAAGPAEPDISPVPDASGHFVVGAVGIAEEGGACEAPGVAYGG
Ga0318501_1070996823300031736SoilMTETATRAEPAEPDIAPVPDVWGHFVVGAVGVAEEGGASEAPGVAYGGRFAPEALMAALEELTAAYEQARKD
Ga0318494_1020817123300031751SoilMTETATATAPAEPDISPVPDVCGHFVVGAVGVAEEGGAGEAPGVAYGGRFAPEALMAALDEL
Ga0318521_1097541623300031770SoilLTDIATAEADHAHPAEPDIAPVPDADGHFVVGAVAVAEEGGAREVPGVAYGGRFAPEALMAALDEL
Ga0318566_1006367343300031779SoilMTETATRAEPAEPDIAPVPDVWGHFVVGAVGVAEEGGASEAPGVAYC
Ga0318503_1008180023300031794SoilMTETATATAPAEPDISPVPDVCGHFVVGAVGVAEEGGAGEAPGVAYGGRFAPEALMAA
Ga0318557_1032599423300031795SoilMTETATAAGPAEPDISPVPDASGHFVVGAVGIAEEGGACEAPGVAYGGRFAPEALMAALDELT
Ga0318523_1008830113300031798SoilMTETATRAEPAEPDIAPVPDVWGHFVVGAVGVAEEGGASEAPGVAYGGRFA
Ga0306925_1081802113300031890SoilLTETATGQAPASRQQGTAHAGPAEPDISPVPDASGHFVVGAVGIAEEGGASEAPGVAYGGRFAPEALMAALDELTAAYEQ
Ga0306921_1031944313300031912SoilMTETATAAGPAEPDISPVPDASGHFVVGAVGIAEEGGACEAPGVAYGGRFAPEALMAALDELTVA
Ga0318530_1029752223300031959SoilMTETATRAEPAEPDIAPVPDVWGHFVVGAVGVAEEGGASEAPGVAYGGRFAPEALMAALE
Ga0318562_1088606613300032008SoilLTETTTPAAPAEPDISPVPDASGHFVVGAVGVAEEGGAREAPGVAYGGRFAPE
Ga0318563_1058666613300032009SoilLTDIATAEGVHAYPAEPDVAPVPDADGHFVVGAVGVAEEGGACEAPGVAYGGRFA
Ga0318563_1058797523300032009SoilMTDTATAQPARPAEPDIGPVPDADGHFVVGAVAVAEAGGAGEAPGVAY
Ga0318549_1037464513300032041SoilLTETATGQAPASRQQGTAHAGPAEPDISPVPDASGHFVVGAVGIAEEGGASEAPGVAYGGRFAPEALMA
Ga0318570_1024224723300032054SoilMTETATATAPAEPDISPVPDVCGHFVVGAVGVAEEGGAGEAPGVAYGGRFAPEALMAALDELTAAYEQAR
Ga0318504_1016598523300032063SoilMTDTSTAQPARPAEPDIGPVPDADGHFVVGAVAVAEAGGAGEAPGV
Ga0318514_1038662923300032066SoilLTDIATAEADHAHPAEPDIAPVPDADGHFVVGAVAVAEEGGAREVPGVAYGGRFAPEALMAALDELVAAYDQ
Ga0318524_1007861413300032067SoilMTETATTQAPEQAPEQATAPPQHAPHAGPAEPDISPVPDASGHFVVGAVGVAEKGGACEAPGVA
Ga0306924_1069058913300032076SoilLTDIATAEADHAHPAEPDIAPVPDADGHFVVGAVAVAEEGRAREVPGVAYGGRF
Ga0335078_1179491823300032805SoilLTETVTASGPGHYAQPAEPDISPVPDVWGHFVVGAVGIAEEGGACEAPGVAYGGRFA
Ga0335072_1033309433300032898SoilMTVTGQASSRHRPHPGPAEPDIAPVPDAAGHFVVGAIGVPADGEASEHPGIAYGGRFAPESLMAALGELSAAYELARR
Ga0335072_1151614913300032898SoilMTETATAREHAAPAEPDISPVPDVRGHFVVGAVGVAEEGGTGEAPGVAYGGRFAPEALTAALDELT
Ga0318519_1063853823300033290SoilLTDIATAEGVHAYPAEPDVAPVPDADGHFVVGAVGVAEEGGACEAPGVAYGGRFAPEALMAALDELAAAYD
Ga0373958_0168879_370_5553300034819Rhizosphere SoilLTEIATAQAPAAPAEPDISPVPDIAGHFVVGAVGVAEEGGTGEAPGVAYGGRFAPEALTAAL


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.