Metagenome / Metatranscriptome Family F092551

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F092551
Family Type	Metagenome / Metatranscriptome
Number of Sequences	107
Average Sequence Length	57 residues
Representative Sequence	WRVFATNFGVVPVAVVEPVLIAALLAGVLAAANLLAAVPALLAARSHPARLLRAE
Number of Associated Samples	95
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	3.06 %
% of genes near scaffold ends (potentially truncated)	86.92 %
% of genes from short scaffolds (< 2000 bps)	83.18 %
Associated GOLD sequencing projects	91
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.51

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (75.701 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (18.692 % of family members)
Environment Ontology (ENVO)	Unclassified (32.710 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (51.402 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 49.40% β-sheet: 0.00% Coil/Unstructured: 50.60%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.51
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.51
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF08240	ADH_N	28.04
PF08002	DUF1697	7.48
PF03476	MOSC_N	4.67
PF00440	TetR_N	3.74
PF13546	DDE_5	2.80
PF04960	Glutaminase	1.87
PF08028	Acyl-CoA_dh_2	1.87
PF00753	Lactamase_B	1.87
PF02687	FtsX	1.87
PF01381	HTH_3	0.93
PF00916	Sulfate_transp	0.93
PF03704	BTAD	0.93
PF13649	Methyltransf_25	0.93
PF13367	PrsW-protease	0.93
PF12697	Abhydrolase_6	0.93
PF13238	AAA_18	0.93
PF14310	Fn3-like	0.93
PF13419	HAD_2	0.93
PF00561	Abhydrolase_1	0.93
PF13460	NAD_binding_10	0.93
PF05988	DUF899	0.93
PF07995	GSDH	0.93
PF00248	Aldo_ket_red	0.93
PF00067	p450	0.93
PF01717	Meth_synt_2	0.93
PF07228	SpoIIE	0.93
PF04075	F420H2_quin_red	0.93
PF08223	PaaX_C	0.93
PF00106	adh_short	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG3797	Uncharacterized conserved protein, DUF1697 family	Function unknown [S]	7.48
COG3217	N-hydroxylaminopurine reductase subunit YcbX, contains MOSC domain	Defense mechanisms [V]	4.67
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	1.87
COG2066	Glutaminase	Amino acid transport and metabolism [E]	1.87
COG0620	Methionine synthase II (cobalamin-independent)	Amino acid transport and metabolism [E]	0.93
COG0659	Sulfate permease or related transporter, MFS superfamily	Inorganic ion transport and metabolism [P]	0.93
COG2124	Cytochrome P450	Defense mechanisms [V]	0.93
COG2133	Glucose/arabinose dehydrogenase, beta-propeller fold	Carbohydrate transport and metabolism [G]	0.93
COG2233	Xanthine/uracil permease	Nucleotide transport and metabolism [F]	0.93
COG2252	Xanthine/guanine/uracil/vitamin C permease GhxP/GhxQ, nucleobase:cation symporter 2 ( NCS2) family	Nucleotide transport and metabolism [F]	0.93
COG3327	DNA-binding transcriptional regulator PaaX (phenylacetic acid degradation)	Transcription [K]	0.93
COG3629	DNA-binding transcriptional regulator DnrI/AfsR/EmbR, SARP family, contains BTAD domain	Transcription [K]	0.93
COG3947	Two-component response regulator, SAPR family, consists of REC, wHTH and BTAD domains	Transcription [K]	0.93
COG4312	Predicted dithiol-disulfide oxidoreductase, DUF899 family	General function prediction only [R]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	75.70 %
Unclassified	root	N/A	24.30 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	75.70 %
Unclassified	root	N/A	24.30 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	75.70 %
Unclassified	root	N/A	24.30 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	40.19 %
Unclassified	root	N/A	24.30 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.74 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	38.32 %
Unclassified	root	N/A	24.30 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	29.91 %
Unclassified	root	N/A	24.30 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.93 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	0.93 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.30 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	2.80 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	1.87 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.93 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.93 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.93 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.93 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.93 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	0.93 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.30 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.80 %
unclassified Pseudonocardiales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales	0.93 %
Nocardiopsaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae	0.93 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.93 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.93 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	0.93 %
Acidimicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae	0.93 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.93 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.93 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.30 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.80 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	0.93 %
Nocardioides	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	0.93 %
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	0.93 %
Allosalinactinospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Allosalinactinospora	0.93 %
unclassified Acidimicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae	0.93 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.93 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.93 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.93 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.30 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.80 %
Pseudonocardia acaciae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia acaciae	0.93 %
Nocardioides guangzhouensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides guangzhouensis	0.93 %
Acidimicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	0.93 %
Allosalinactinospora lopnorensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Allosalinactinospora → Allosalinactinospora lopnorensis	0.93 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	0.93 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.93 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.93 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.93 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459018\|G1P06HT01C2H2V	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101219455	Not Available	604	Open in IMG/M
3300001384\|JGI20190J14840_1020557	Not Available	555	Open in IMG/M
3300005093\|Ga0062594_101188529	All Organisms → cellular organisms → Bacteria	754	Open in IMG/M
3300005329\|Ga0070683_100201160	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1891	Open in IMG/M
3300005331\|Ga0070670_100255558	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1527	Open in IMG/M
3300005337\|Ga0070682_100773851	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	777	Open in IMG/M
3300005406\|Ga0070703_10063441	All Organisms → cellular organisms → Bacteria	1215	Open in IMG/M
3300005434\|Ga0070709_10241405	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1297	Open in IMG/M
3300005436\|Ga0070713_100261237	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1582	Open in IMG/M
3300005436\|Ga0070713_101171743	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	743	Open in IMG/M
3300005436\|Ga0070713_101386980	All Organisms → cellular organisms → Bacteria	681	Open in IMG/M
3300005437\|Ga0070710_10686054	All Organisms → cellular organisms → Bacteria	721	Open in IMG/M
3300005437\|Ga0070710_10932266	All Organisms → cellular organisms → Bacteria	629	Open in IMG/M
3300005437\|Ga0070710_11055464	All Organisms → cellular organisms → Bacteria	594	Open in IMG/M
3300005439\|Ga0070711_101864349	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	528	Open in IMG/M
3300005444\|Ga0070694_100148562	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1709	Open in IMG/M
3300005456\|Ga0070678_102066809	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	539	Open in IMG/M
3300005549\|Ga0070704_100840473	All Organisms → cellular organisms → Bacteria	822	Open in IMG/M
3300005578\|Ga0068854_102251853	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	504	Open in IMG/M
3300005841\|Ga0068863_100781786	All Organisms → cellular organisms → Bacteria	951	Open in IMG/M
3300005937\|Ga0081455_10560858	All Organisms → cellular organisms → Bacteria	753	Open in IMG/M
3300006028\|Ga0070717_10588119	All Organisms → cellular organisms → Bacteria	1009	Open in IMG/M
3300006046\|Ga0066652_102087711	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	502	Open in IMG/M
3300006173\|Ga0070716_101851803	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300006175\|Ga0070712_100179097	All Organisms → cellular organisms → Bacteria	1650	Open in IMG/M
3300006175\|Ga0070712_100338684	All Organisms → cellular organisms → Bacteria	1227	Open in IMG/M
3300006578\|Ga0074059_12118738	All Organisms → cellular organisms → Bacteria → Proteobacteria	795	Open in IMG/M
3300006797\|Ga0066659_10978255	All Organisms → cellular organisms → Bacteria	707	Open in IMG/M
3300006871\|Ga0075434_100466099	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1284	Open in IMG/M
3300006914\|Ga0075436_100839044	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	685	Open in IMG/M
3300009090\|Ga0099827_11521901	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia acaciae	582	Open in IMG/M
3300009174\|Ga0105241_11240970	Not Available	707	Open in IMG/M
3300009177\|Ga0105248_10779054	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1079	Open in IMG/M
3300010046\|Ga0126384_11371063	All Organisms → cellular organisms → Bacteria	658	Open in IMG/M
3300010320\|Ga0134109_10082044	All Organisms → cellular organisms → Bacteria	1105	Open in IMG/M
3300010361\|Ga0126378_12694371	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	568	Open in IMG/M
3300010362\|Ga0126377_11496129	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	749	Open in IMG/M
3300010375\|Ga0105239_12956120	All Organisms → cellular organisms → Bacteria → Proteobacteria	554	Open in IMG/M
3300010396\|Ga0134126_11774122	All Organisms → cellular organisms → Bacteria	677	Open in IMG/M
3300010399\|Ga0134127_10590273	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	1138	Open in IMG/M
3300010877\|Ga0126356_10463559	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	784	Open in IMG/M
3300012201\|Ga0137365_10129054	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1900	Open in IMG/M
3300012207\|Ga0137381_10316419	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	1360	Open in IMG/M
3300012208\|Ga0137376_10514909	All Organisms → cellular organisms → Bacteria	1037	Open in IMG/M
3300012210\|Ga0137378_11432310	All Organisms → cellular organisms → Bacteria	603	Open in IMG/M
3300012349\|Ga0137387_10239047	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1308	Open in IMG/M
3300012350\|Ga0137372_10467841	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	943	Open in IMG/M
3300012354\|Ga0137366_10008402	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	8138	Open in IMG/M
3300012359\|Ga0137385_10045284	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3940	Open in IMG/M
3300012359\|Ga0137385_10805722	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	780	Open in IMG/M
3300012944\|Ga0137410_11882478	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300012955\|Ga0164298_10757671	All Organisms → cellular organisms → Bacteria	689	Open in IMG/M
3300012984\|Ga0164309_10185177	All Organisms → cellular organisms → Bacteria	1419	Open in IMG/M
3300013297\|Ga0157378_12869908	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	534	Open in IMG/M
3300014488\|Ga0182001_10666335	Not Available	512	Open in IMG/M
3300014829\|Ga0120104_1052090	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	772	Open in IMG/M
3300016387\|Ga0182040_11825566	Not Available	521	Open in IMG/M
3300016387\|Ga0182040_11853486	Not Available	517	Open in IMG/M
3300017792\|Ga0163161_11572941	All Organisms → cellular organisms → Bacteria	579	Open in IMG/M
3300017924\|Ga0187820_1290375	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	536	Open in IMG/M
3300018433\|Ga0066667_10426816	Not Available	1078	Open in IMG/M
3300019879\|Ga0193723_1007576	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3572	Open in IMG/M
3300021181\|Ga0210388_10926701	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides guangzhouensis	750	Open in IMG/M
3300021363\|Ga0193699_10292687	All Organisms → cellular organisms → Bacteria	679	Open in IMG/M
3300021405\|Ga0210387_11755964	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300021445\|Ga0182009_10155081	All Organisms → cellular organisms → Bacteria	1090	Open in IMG/M
3300021478\|Ga0210402_10920770	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	801	Open in IMG/M
3300024055\|Ga0247794_10057266	All Organisms → cellular organisms → Bacteria	1083	Open in IMG/M
3300025915\|Ga0207693_10022472	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5012	Open in IMG/M
3300025916\|Ga0207663_10184927	Not Available	1491	Open in IMG/M
3300025921\|Ga0207652_11019721	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	727	Open in IMG/M
3300025922\|Ga0207646_10053507	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3611	Open in IMG/M
3300025929\|Ga0207664_11965694	Not Available	508	Open in IMG/M
3300025936\|Ga0207670_10441177	All Organisms → cellular organisms → Bacteria	1048	Open in IMG/M
3300026088\|Ga0207641_11078655	Not Available	801	Open in IMG/M
3300026550\|Ga0209474_10572533	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300026899\|Ga0209326_1000287	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4114	Open in IMG/M
3300027119\|Ga0209522_1035976	All Organisms → cellular organisms → Bacteria	610	Open in IMG/M
3300027775\|Ga0209177_10455588	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	524	Open in IMG/M
3300027879\|Ga0209169_10509746	All Organisms → cellular organisms → Bacteria → Terrabacteria group	631	Open in IMG/M
3300028755\|Ga0307316_10367335	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300028885\|Ga0307304_10004844	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3984	Open in IMG/M
3300031723\|Ga0318493_10008444	All Organisms → cellular organisms → Bacteria	4159	Open in IMG/M
3300031724\|Ga0318500_10116125	Not Available	1232	Open in IMG/M
3300031795\|Ga0318557_10176366	Not Available	972	Open in IMG/M
3300031910\|Ga0306923_11368252	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	747	Open in IMG/M
3300032025\|Ga0318507_10133946	Not Available	1052	Open in IMG/M
3300032039\|Ga0318559_10215845	Not Available	884	Open in IMG/M
3300032041\|Ga0318549_10120740	Not Available	1154	Open in IMG/M
3300032180\|Ga0307471_103384390	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	565	Open in IMG/M
3300032180\|Ga0307471_103835406	All Organisms → cellular organisms → Bacteria → Proteobacteria	532	Open in IMG/M
3300032261\|Ga0306920_100243693	Not Available	2682	Open in IMG/M
3300032783\|Ga0335079_11046041	All Organisms → cellular organisms → Bacteria → Terrabacteria group	830	Open in IMG/M
3300032828\|Ga0335080_11081175	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Allosalinactinospora → Allosalinactinospora lopnorensis	812	Open in IMG/M
3300032898\|Ga0335072_11080211	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	727	Open in IMG/M
3300033004\|Ga0335084_12030327	All Organisms → cellular organisms → Bacteria	560	Open in IMG/M
3300034819\|Ga0373958_0173090	Not Available	552	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	84.11%
Host-Associated	Host-Associated	14.95%
Engineered	Engineered	0.93%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	83.18%
Plants	Host-Associated → Plants	14.95%
Aquatic	Environmental → Aquatic	0.93%
Solid Waste	Engineered → Solid Waste	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	83.18%
Rhizosphere	Host-Associated → Plants → Rhizosphere	9.35%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.61%
Freshwater	Environmental → Aquatic → Freshwater	0.93%
Grass	Engineered → Solid Waste → Grass	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	51.40%
Loam	Environmental → Terrestrial → Soil → Loam	26.17%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.48%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.61%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.67%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.87%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.93%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.93%
Composting	Engineered → Solid Waste → Grass → Composting	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	28.04%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	23.36%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	14.02%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.48%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.67%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.74%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.80%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.80%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.87%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.87%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.87%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.93%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	18.69%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	13.08%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.41%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.74%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.80%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.80%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.80%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.87%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.87%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	1.87%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.87%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.87%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.87%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.93%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.93%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.93%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.93%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.93%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.93%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.93%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.93%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.93%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.93%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.93%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.93%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.93%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459018	Litter degradation MG2	Engineered	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001384	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-3 shallow-072012	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300005952	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006578	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010877	Boreal forest soil eukaryotic communities from Alaska, USA - W3-2 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014488	Bulk soil microbial communities from Mexico - San Felipe (SF) metaG	Environmental	Open in IMG/M
3300014829	Permafrost microbial communities from Nunavut, Canada - A10_35cm_6M	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300019879	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021363	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c2	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300024055	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S046-202B-6	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026217	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300026899	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027119	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300034819	Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_1	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
2MG_01680760	2170459018	Switchgrass, Maize And Mischanthus Litter	FATNFGVVPVDVVEPVLIAALVXGVLAVANLLAAVPALLAARSQPARLLRAE
INPhiseqgaiiFebDRAFT_1012194552	3300000364	Soil	IGIAAGKVLWRVFATNFGVVPVEVVKPLLLTALVTGVLAAANVVATVPALLAARSHPGQLLRAE*
JGI20190J14840_10205571	3300001384	Arctic Peat Soil	TNFGVVPLTVVDALPVAALAFGVLAAANVLAFFPALLAARSRPAQLLRAE*
Ga0062594_1011885291	3300005093	Soil	LFASSFGVVPVPVVRPLLIVVLLAGVLAAANLLAAVPALLAARARPGPALRAE*
Ga0070683_1002011601	3300005329	Corn Rhizosphere	IATGKVFWRVFATNFGVVPVAVVEPVLIAALAVGVLAGANLLAAVPALLAARSQPARLLRAE*
Ga0070670_1002555582	3300005331	Switchgrass Rhizosphere	GIATGKVLWRVFATNFGVVPVAVVEPVLIAALAVGVLAGANLLAAVPALLAARSQPARLLRAE*
Ga0070682_1007738512	3300005337	Corn Rhizosphere	LWRVFATNFGVVPVPVTQPLLLTALTAGVLAAANLLAAVPALLAARSQPAQLLRAE*
Ga0070692_105959002	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	WRVFAVSFGVVAVPVLPPGLLAVLSGAVLVAANLLAAGPAIAAARARPGPVLRDL*
Ga0070703_100634411	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	ATNFGVVPVAVVEPVLIAALAVGVLAGANLLAAVPALLAARSQPARLLRAE*
Ga0070709_102414053	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	LWRLFATSFGVVPVPVVRPLLIAVLLAGVLIAANLIAAVPAVLAARARPGPALRAE*
Ga0070713_1002612372	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	RVFATNFGVVPLTVVNVPLIATLAVGVLAAANVLAFFPALLASRSRPAQLLRAE*
Ga0070713_1011717432	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	SSFGVVPVPVVRPLLIVVLLAGVLAAANLLAAVPALLAARARPGPALRAE*
Ga0070713_1013869801	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	PLGIATGKVLWRVFATNFGVVPVAVVEPVLIAALAVGVLAGANLLAAVPALLAARSQPARLLRAE*
Ga0070710_106860542	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	GIATGKVLWRVFATNFGVVSVAVVEPVVIVALAAGVLAAANLLGAVPALLAARSHPARLLRAE*
Ga0070710_109322661	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	WRVFATNFGVVPVPVAEPLLLTVLVAGVLVAANMLAVVPALLAARCHPGHLLRTE*
Ga0070710_110554642	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	GKVLWRVFATNFGVVPVTVAEPVLIAVLAAGVLAAANLLAAVPALLAARSQPARLLRAE*
Ga0070711_1018643492	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	WRVFATNFGVVPVAVVEPVLIVVLAAGVLAAANLLAAIPALLAARSRSADLLRAE*
Ga0070694_1001485621	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	GIATGKVLWRVFATNFGVVPVAVVEPVLIVALAVGVLAGANLLAAVPALLAARSQPARLLRAE*
Ga0070678_1020668092	3300005456	Miscanthus Rhizosphere	AAGRALWRLFASSFGVVPVPVVRPLLIVVLLAGVLAAANLLAAVPALLAARARPGPALRAE*
Ga0070704_1008404732	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	FATNFGVVPVAVVEPVVIVALAAGVLAAANLLAAVPALLAARSQPARLLRAE*
Ga0068854_1022518532	3300005578	Corn Rhizosphere	TGKVLWRVFATNFGVVPVAVVEPVLIVALAVGVLAGANLLAAVPALLAARSQPARLLRAE
Ga0068863_1007817863	3300005841	Switchgrass Rhizosphere	FGVVPVPVTQPLLLTALTAGVLAAANLLAAVPALLAARSQPAQLLRAE*
Ga0081455_105608582	3300005937	Tabebuia Heterophylla Rhizosphere	TNFGVVPVAVVEPVLIAALAVGVLAAANLLAAVPALLAARSQPARLLRAE*
Ga0080026_100063672	3300005952	Permafrost Soil	VALVGIAVGAPIGIAAGKVLWRVFATNFGVVPVPVVQPLLIAALLTGVLATANMLAAVPALLAARSHPGQLLRAE*
Ga0070717_105881192	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	VFATDFGVVPLTVVAALPIAALAFGVLAAANVLAFFPALLAARSRPAQLLRAE*
Ga0066652_1020877111	3300006046	Soil	PAGIAAGRVLWRVFATNFGVVPVPVVQPLVMVAMATGVLIAANALAAVPALLAAQSQPGQLLRTE*
Ga0070716_1018518032	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	GRVFWRVFATNFGVVPLTVVDALPVAALAFAVLAAANVLAFFPALLAARSRPAQLLRAE*
Ga0070712_1000113081	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	VPVAEPLLLTVLVAGVLVAANMLAVVPALLAARCHPGHLLRTE*
Ga0070712_1001790971	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	VFATNFGVVPLTVVDALPVAALAFAVLAAANVLAFFPALLAARSRPAQLLRAE*
Ga0070712_1003386841	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	GVVPVPVVRPLLIVVLLAGVLAAANLLAAVPAVLAARARPGPALRAE*
Ga0074059_121187382	3300006578	Soil	FGVVPVPVVQPLLLAALATGVLAAANVLAAVPALLAARSHPGQLLRAE*
Ga0066659_109782551	3300006797	Soil	VLWRVFATNFGVVPVAVTEPVLIAVLAAGVLAGANLLAAVPALLAARSHPARLLRAE*
Ga0075434_1004660991	3300006871	Populus Rhizosphere	LWRLFATSFGVVPVPVVRPLLIIVLLAGVLAAANLLAAVPALLAARARPGPALRAE*
Ga0075436_1008390442	3300006914	Populus Rhizosphere	GVATGKVLWRVFATSFGVVPVAVVEPVLIAALAVGVLAGANLLAAVPALLAARSQPARLLRAE*
Ga0099827_115219011	3300009090	Vadose Zone Soil	LGIAAGKVLWRAFATNFGVVPFTVVQALPVAAIAVGVLAAANVLAFLPALLAARAHPAQLLRAE*
Ga0099827_115276161	3300009090	Vadose Zone Soil	TVCWQATTVALAGVAVGVPIGIAAGKVLWRVFATNFGVVPVEVVKPLLLAALVTGVLAAANVVATVPALLAARSHPGQLLRAE*
Ga0105241_112409702	3300009174	Corn Rhizosphere	VFATNFGVVPLTVVEALPVAALAFGVLAAANVLAFFPALLAARSRPAQLLRAE*
Ga0105242_103346341	3300009176	Miscanthus Rhizosphere	VVPLTVVEALPVAALAFGVLAAANVLAFFPALLAARSRPAQLLRAE*
Ga0105248_107790542	3300009177	Switchgrass Rhizosphere	GVVPLTVVEALPVAALAFGVLAAANVLAFFPALLAARSRPAQLLRAE*
Ga0126384_113710631	3300010046	Tropical Forest Soil	AGRVLWRVFATNFGVVPVDVVEPVLIAALVAGVLAVANLLAAVPALLAARSQPARLLRAE
Ga0134109_100820441	3300010320	Grasslands Soil	KVLWRAFATNFGVVPVAVTEPVLIAALAVGVLAAANLLAAVPALLAARSQPARLLRAE*
Ga0126378_126943712	3300010361	Tropical Forest Soil	WWLFATSFGVVPVPVARPLLIVVLLAGVLAAANLLAAVPALLAARARPGPALRAE*
Ga0126377_114961292	3300010362	Tropical Forest Soil	WRLFATSFGVVPVPVIRPLLVVVLLAGVLAAANLLAAVPALLSARARPGPALRAE*
Ga0105239_129561202	3300010375	Corn Rhizosphere	VWRVFATNFGVVPLTVVNVPLIATLAVGVLAAANVLAFFPALLASRSRPAQLLRAE*
Ga0134126_117741221	3300010396	Terrestrial Soil	GIATGKVLWRVFATNFGVVPVAVVEPVLIAALAVGVLAAANLLAAVPALLAARSQPARLLRAE*
Ga0134127_105902733	3300010399	Terrestrial Soil	FASSFGVVPVPVVRPLLIVVLLAGVLAAANLLAAVPALLAARARPGPALRAE*
Ga0126356_104635592	3300010877	Boreal Forest Soil	GRVLWRVFATNFGVVPVAVVEPVLIVALAAGVLAVANLLAAVPALLAARSRPAQLLRAE*
Ga0137365_101290541	3300012201	Vadose Zone Soil	GIAAGRVLWRVFATNFGVVPVPVVEPLLLAALVAGVLAAANVLAAVPALLAARSHPGQLLRAE*
Ga0137381_103164193	3300012207	Vadose Zone Soil	VFWRVFATNFGVVPVAVADPLLLAALVTGVLAAANVLAGVPAVLAARSHPGELLRTG*
Ga0137381_109839771	3300012207	Vadose Zone Soil	VALVGIAVGLPIGIAVGKVLWRAFAANFGVVPVAVAHPLPLAALVVGVLAAANVLAAFPALLAARSHPGQVLRRE*
Ga0137376_105149091	3300012208	Vadose Zone Soil	FGVVPVDVVEPVLIAALAVGVLAVANALAAVPALLAARSQPARLLRAE*
Ga0137378_110314082	3300012210	Vadose Zone Soil	VVPVAVVHPLPLAALVVGVLAAANALAVVPALLAARSHSGQLLRAE*
Ga0137378_114323102	3300012210	Vadose Zone Soil	LWRIFATDFGVVPVDVVEPVLIAALAVGVLAVANALAAVPALLAARSQPARLLRAE*
Ga0137387_102390471	3300012349	Vadose Zone Soil	AVVPVAVVQPLSLVALVAGVLAAANLLAAIPALLAARSHPGQLLRTE*
Ga0137372_104678413	3300012350	Vadose Zone Soil	RVFASEVGVVAVTVVPVTALAALAGGVLVAANLLAIIPAWLAARSRPAQLLRAE*
Ga0137366_100084021	3300012354	Vadose Zone Soil	GKVAWRLFATNFGVVPVAVVQAVPLVLLAATALAAANLLAVLPALLAGRARPADLLRAE*
Ga0137385_100452846	3300012359	Vadose Zone Soil	GRVLWRVFATNFGVVPVPVVQPLLLAVLAAGVLAAANVLAAVPALMAARSHPGQLLRAE*
Ga0137385_108057222	3300012359	Vadose Zone Soil	GVVPVEVVEPLLLAALVTGVLAAANVVAAIPALLAARSHPAELLRTE*
Ga0137410_118824782	3300012944	Vadose Zone Soil	LWRVFATNFGVVPVAVVEPVVIVALAAGVLAAANLLAAVPALLAARSHPARLLRAE*
Ga0164298_107576712	3300012955	Soil	NFGVVPVAVVEPVLIVALVAGVLAVANLLAAAPALLAARSDPARLLRAE*
Ga0164309_101851771	3300012984	Soil	TGKVLWRVFATNFGVVPVAVVEPVLIAALVAGVLAAANLLAAVPALLAARSHPARLLRAE
Ga0157369_108672872	3300013105	Corn Rhizosphere	GVVPVAVVEPVVIVALAAGVLAVANLLAAVPALLAARSHPARLLRAE*
Ga0157378_128699082	3300013297	Miscanthus Rhizosphere	VPLGIAAGRVVWRVFATNFGVVPLTVVNVPLIATLAVGVLAAANVLAFFRALLASRSRPAQLLRAE*
Ga0182001_106663352	3300014488	Soil	ATNFGVVPVAVVPAVLIGVLAAGVLVAANVLAAVPALLAARVRPARLLRNE*
Ga0120104_10520901	3300014829	Permafrost	GIAAGRVLWRVFATNFGVVPLTVVEVLPVAALALGVLVAANVLAFVPALLAARSRPAELLRAE*
Ga0182040_118255661	3300016387	Soil	AWRLFATNLGVVPVPVVPAEVLAALACGVLVAANALAAIPAWLAARSRPAQLLRAE
Ga0182040_118534862	3300016387	Soil	GRVLWRVFATNFGVVPLTVVEALPAAALAFGVLAAANVLAFFPALLAARSRPAQLLRAE
Ga0163161_115729412	3300017792	Switchgrass Rhizosphere	WRVFATNFGVVPVAVVEPVVIVALAAGVLAAANLLAAVPALLAARSQPARLLRAE
Ga0187820_12903751	3300017924	Freshwater Sediment	VLWRVFATNFGVVPVPVVEPVLIIVLVAGVLAVANLLAAAPALLAARSDPARLLRAE
Ga0066667_104268163	3300018433	Grasslands Soil	WRVFATNFGVVPVPVVQPLVMVAMATGVLIAANALAAVPALLAAQSQPGQLLRTE
Ga0193723_10075766	3300019879	Soil	IATGKVLWRVFATNFGVVPVAVVEPVLIAALLAGVLAAANLLAAVPALLAARSHPARLLRAE
Ga0210388_109267012	3300021181	Soil	VAAGRVLWRVFATNFGVVPVPVVPVLLLAALAAGVLAGANVLAAGPALVAARSHPGQLLRSE
Ga0193699_102926871	3300021363	Soil	RVLWRVFATNFGVVPVAVVEPVLIAALAVGVLAGANLLAAVPALLAARSQPARLLRAE
Ga0210387_117559641	3300021405	Soil	ATGKVLWRVFATNFGVVPVAVVEPVLIAALAVGVLAGANLLAAVPALLAARSQPARLLRA
Ga0182009_101550812	3300021445	Soil	LWRVFATNFGVVPVDVVEPVLIAALVAGVVAVANLLAAVPALLAARSQPARLLRAE
Ga0210402_109207702	3300021478	Soil	ALWRLFATSFGVVPVPVVRPLLIVVLLAGVLAAANLLAAVPAVLAARARPGPALRAE
Ga0247794_100572662	3300024055	Soil	GVAAGRVLWRVFATNFGVVPVDVVEPVLIAALVAGVLAVANLLAAVPALLAARSQPARLLRAE
Ga0207693_100224725	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	FATNFGVVPLTVVDALPVAALAFAVLAAANVLAFFPALLAARSRPAQLLRAE
Ga0207663_101849273	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	AAGRVFWRVFATNFGVVPLTVVDALPVAALAFAVLAAANVLAFFPALLAARSRPAQLLRA
Ga0207652_110197212	3300025921	Corn Rhizosphere	AGRALWRLFASSFGVVPVPVVRPLLIVVLLAGVLAAANLLAAVPALLAARARPGPALRAE
Ga0207646_100535071	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	SFGVVPVPVVRPLLIVVLLAGVLAAANLLAAVPALLAARARPGPALRAE
Ga0207664_119656941	3300025929	Agricultural Soil	FGVVPVAVVEPVLIVVLAAGVLAAANLLAAIPALLAARSRSADLLRAE
Ga0207670_104411771	3300025936	Switchgrass Rhizosphere	GKVFWRVFATNFGVVPVAVVEPVLIAALAVGVLAGANLLAAVPALLAARSQPARLLRAE
Ga0207641_110786552	3300026088	Switchgrass Rhizosphere	RVFATNFGVVPVPVTQPLLLTALTAGVLAAANLLAAVPALLAARSQPAQLLRAE
Ga0209871_10047692	3300026217	Permafrost Soil	VALVGIAVGAPIGIAAGKVLWRVFATNFGVVPVPVVQPLLIAALLTGVLATANMLAAVPALLAARSHPGQLLRAE
Ga0209474_105725331	3300026550	Soil	NFGVVPVDVVEPVLIAALVAGVLAVANLLAAVPALLAARSQPARLLRAE
Ga0209326_10002871	3300026899	Forest Soil	NFGVVPVAVVEPVLIAALAVGVLAGANLLAAVPALLAARSQPARLLRAE
Ga0209522_10359761	3300027119	Forest Soil	GRVLWRVFATNFGVVPVAVVEPVLIAALAVGVLAGANLLAAVPALLAARSQPARLLRAE
Ga0209177_104555881	3300027775	Agricultural Soil	FGVVPVPVVSPLLVVILLAGVLAAANLLAAVPALLAARARPGPALRAE
Ga0209169_105097461	3300027879	Soil	GRVLWRVFATNFGVVPVPVVPLLTLTALAVGVLAAANVLAAVPALTAARSRPGQLPRAE
Ga0307316_103673351	3300028755	Soil	WRVFATNFGVVPVAVVEPVLIAALLAGVLAAANLLAAVPALLAARSHPARLLRAE
Ga0307304_100048441	3300028885	Soil	ATNFGVVPVAVVEPVLIAALLAGVLAAANLLAAVPALLAARSHPARLLRAE
Ga0318493_100084441	3300031723	Soil	GIAAGRVFWRVFATNFGVVPLTVVEALPVAALAFGVLAAANVLAFFPALLAARSRPAQLLRAE
Ga0318500_101161251	3300031724	Soil	RVFATNFGVVPLTVVEALPVAALAFGVLAAANVLAFFPALLAARSRPAQLLRAE
Ga0318557_101763662	3300031795	Soil	AGRVLWRVFATNFGVVPLTVVEALPVAALAFAVLAAANVLAFFPALLAARSRPAQLLRAE
Ga0306923_113682521	3300031910	Soil	GIAAGRVLWRVFATNFGVVPLTVVEALPVAALAFAVLAAANVLAFFPALLAARSRPAQLLRAE
Ga0318507_101339462	3300032025	Soil	AGRVFWRVFATNFGVVPLTVVEALPVAALAFGVLAAANVLAFFPALLAARSRPAQLLRAE
Ga0318559_102158452	3300032039	Soil	IAAGRVLWRVFATNFGVVPLTVVEALPVAALAFGVLAAANVLAFFPALLAARSRPAQLLRAE
Ga0318549_101207402	3300032041	Soil	VPLGIAAGRVFWRVFATNFGVVPLTVVEALPVAALAFGVLAAANVLAFFPALLAARSRPAQLLRAE
Ga0307471_1033843902	3300032180	Hardwood Forest Soil	LWRLFATSFGVVPVPVVRPLLIAVLLAGVLAAANLLAAVPALLAARARPGPALRAE
Ga0307471_1038354061	3300032180	Hardwood Forest Soil	FATNFGVVPLTVVNVPLIATLAVGVLAAANVLAFFPALLASRSRPAQLLRAE
Ga0306920_1002436931	3300032261	Soil	RVLWRVFATNFGVVPLTVVEALPVAALAFAVLAAANVLAFFPALLAARSRPAQLLRAE
Ga0335079_110460411	3300032783	Soil	WRTFATTFGVVPVPVVQPWPLAALAVAVLAAANLLAVGPALLATRSRPAELLRAD
Ga0335080_110811751	3300032828	Soil	PLGIAAGRVLWRVFATNFGVVPLTVVEALPMAVLVFGVLAAANVLAFFPALLAARSRPAQLLRAE
Ga0335072_110802111	3300032898	Soil	RLFATNFGVVPLTVVTVLPLAALALGVLAAANVLAFVPALLAARSRPARLLRAE
Ga0335084_120303272	3300033004	Soil	AFATNFGVVPVAVVEPVLIAALAAGVLAVANLLAAVPALLAARSDPARLLRAE
Ga0373958_0173090_13_183	3300034819	Rhizosphere Soil	LWRVFATNFGVVPLTVVEALPVAALAFGVLAAANVLAFFPALLAARSRPAQLLRAE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F092551

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences