Metagenome / Metatranscriptome Family F092545

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F092545
Family Type	Metagenome / Metatranscriptome
Number of Sequences	107
Average Sequence Length	50 residues
Representative Sequence	QQPVIYVLLKDRKQNVPVWYVIYGTSEKDRKGIGVINATTGAFVSAGK
Number of Associated Samples	92
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	91.59 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.065 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland (18.692 % of family members)
Environment Ontology (ENVO)	Unclassified (54.206 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (46.729 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 50.00% Coil/Unstructured: 50.00%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF10282	Lactonase	14.02
PF13180	PDZ_2	8.41
PF13365	Trypsin_2	6.54
PF12706	Lactamase_B_2	5.61
PF10041	DUF2277	5.61
PF07589	PEP-CTERM	4.67
PF13418	Kelch_4	3.74
PF08818	DUF1801	3.74
PF07238	PilZ	3.74
PF02239	Cytochrom_D1	2.80
PF01926	MMR_HSR1	1.87
PF14833	NAD_binding_11	0.93
PF13620	CarboxypepD_reg	0.93
PF03544	TonB_C	0.93
PF13565	HTH_32	0.93
PF11799	IMS_C	0.93
PF03446	NAD_binding_2	0.93
PF00691	OmpA	0.93
PF04014	MazE_antitoxin	0.93
PF03928	HbpS-like	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG4430	Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 family	Function unknown [S]	3.74
COG5646	Iron-binding protein Fra/YdhG, frataxin family (Fe-S cluster biosynthesis)	Posttranslational modification, protein turnover, chaperones [O]	3.74
COG5649	Uncharacterized conserved protein, DUF1801 domain	Function unknown [S]	3.74
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.07 %
Unclassified	root	N/A	0.93 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.07 %
Unclassified	root	N/A	0.93 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.07 %
Unclassified	root	N/A	0.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	79.44 %
Unclassified	root	N/A	0.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	34.58 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	26.17 %
Unclassified	root	N/A	0.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	33.64 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	26.17 %
Unclassified	root	N/A	0.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	30.84 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	26.17 %
Unclassified	root	N/A	0.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	26.17 %
Candidatus Sulfotelmatobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter	20.56 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	3.74 %
Silvibacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium	1.87 %
Unclassified	root	N/A	0.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	26.17 %
unclassified Candidatus Sulfotelmatobacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter	20.56 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3.74 %
Silvibacterium bohemicum	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum	1.87 %
Unclassified	root	N/A	0.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	26.17 %
Candidatus Sulfotelmatobacter sp. SbA7	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	20.56 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3.74 %
Silvibacterium bohemicum	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum	1.87 %
Unclassified	root	N/A	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001154\|JGI12636J13339_1046578	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	541	Open in IMG/M
3300001661\|JGI12053J15887_10168237	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1138	Open in IMG/M
3300004082\|Ga0062384_100952325	All Organisms → cellular organisms → Bacteria → Acidobacteria	611	Open in IMG/M
3300004091\|Ga0062387_100815543	All Organisms → cellular organisms → Bacteria	697	Open in IMG/M
3300004152\|Ga0062386_101010625	All Organisms → cellular organisms → Bacteria → Acidobacteria	689	Open in IMG/M
3300004468\|Ga0068977_1211747	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1112	Open in IMG/M
3300004612\|Ga0068961_1316784	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1103	Open in IMG/M
3300005552\|Ga0066701_10139705	All Organisms → cellular organisms → Bacteria	1451	Open in IMG/M
3300005559\|Ga0066700_10825327	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	622	Open in IMG/M
3300006059\|Ga0075017_100510857	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	912	Open in IMG/M
3300006086\|Ga0075019_10498791	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	754	Open in IMG/M
3300006102\|Ga0075015_100088263	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1539	Open in IMG/M
3300006174\|Ga0075014_100090176	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1410	Open in IMG/M
3300007255\|Ga0099791_10566947	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	554	Open in IMG/M
3300009519\|Ga0116108_1104928	All Organisms → cellular organisms → Bacteria	853	Open in IMG/M
3300009523\|Ga0116221_1043035	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2149	Open in IMG/M
3300009525\|Ga0116220_10570146	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	518	Open in IMG/M
3300009547\|Ga0116136_1165979	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	557	Open in IMG/M
3300009552\|Ga0116138_1019570	All Organisms → cellular organisms → Bacteria → Acidobacteria	2112	Open in IMG/M
3300009618\|Ga0116127_1089323	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum	822	Open in IMG/M
3300009621\|Ga0116116_1121573	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	701	Open in IMG/M
3300009630\|Ga0116114_1070020	All Organisms → cellular organisms → Bacteria	962	Open in IMG/M
3300009632\|Ga0116102_1152984	All Organisms → cellular organisms → Bacteria	634	Open in IMG/M
3300009634\|Ga0116124_1059100	All Organisms → cellular organisms → Bacteria	1118	Open in IMG/M
3300009634\|Ga0116124_1241199	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	501	Open in IMG/M
3300009636\|Ga0116112_1217418	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300009640\|Ga0116126_1040899	All Organisms → cellular organisms → Bacteria → Acidobacteria	1879	Open in IMG/M
3300009643\|Ga0116110_1219776	All Organisms → cellular organisms → Bacteria	613	Open in IMG/M
3300009645\|Ga0116106_1147985	All Organisms → cellular organisms → Bacteria → Acidobacteria	751	Open in IMG/M
3300009645\|Ga0116106_1180917	All Organisms → cellular organisms → Bacteria	672	Open in IMG/M
3300009645\|Ga0116106_1244365	All Organisms → cellular organisms → Bacteria → Acidobacteria	571	Open in IMG/M
3300009646\|Ga0116132_1263193	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	525	Open in IMG/M
3300009698\|Ga0116216_10023949	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	3820	Open in IMG/M
3300010339\|Ga0074046_10310495	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	967	Open in IMG/M
3300010343\|Ga0074044_10754876	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	635	Open in IMG/M
3300010343\|Ga0074044_11025893	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	541	Open in IMG/M
3300010379\|Ga0136449_101328464	All Organisms → cellular organisms → Bacteria → Acidobacteria	1118	Open in IMG/M
3300010379\|Ga0136449_101857498	All Organisms → cellular organisms → Bacteria → Acidobacteria	898	Open in IMG/M
3300010379\|Ga0136449_103734715	All Organisms → cellular organisms → Bacteria → Acidobacteria	574	Open in IMG/M
3300011053\|Ga0138531_188748	All Organisms → cellular organisms → Bacteria → Acidobacteria	521	Open in IMG/M
3300011064\|Ga0138525_1100902	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1098	Open in IMG/M
3300011269\|Ga0137392_10235902	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	1503	Open in IMG/M
3300012199\|Ga0137383_10449996	All Organisms → cellular organisms → Bacteria	943	Open in IMG/M
3300012202\|Ga0137363_11266112	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	625	Open in IMG/M
3300012203\|Ga0137399_11479398	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	566	Open in IMG/M
3300012205\|Ga0137362_11774831	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	504	Open in IMG/M
3300012362\|Ga0137361_10416158	All Organisms → cellular organisms → Bacteria → Acidobacteria	1235	Open in IMG/M
3300012582\|Ga0137358_10779205	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	637	Open in IMG/M
3300012683\|Ga0137398_10688529	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	710	Open in IMG/M
3300014155\|Ga0181524_10398952	All Organisms → cellular organisms → Bacteria → Acidobacteria	601	Open in IMG/M
3300014159\|Ga0181530_10059079	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2455	Open in IMG/M
3300014162\|Ga0181538_10005829	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	10868	Open in IMG/M
3300014162\|Ga0181538_10462490	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	671	Open in IMG/M
3300014164\|Ga0181532_10233941	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1062	Open in IMG/M
3300014165\|Ga0181523_10263108	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	982	Open in IMG/M
3300014493\|Ga0182016_10033113	All Organisms → cellular organisms → Bacteria	4310	Open in IMG/M
3300014638\|Ga0181536_10200174	All Organisms → cellular organisms → Bacteria	995	Open in IMG/M
3300016705\|Ga0181507_1054186	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1109	Open in IMG/M
3300016750\|Ga0181505_10290008	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1041	Open in IMG/M
3300017929\|Ga0187849_1336187	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	559	Open in IMG/M
3300017931\|Ga0187877_1379826	All Organisms → cellular organisms → Bacteria → Acidobacteria	534	Open in IMG/M
3300017935\|Ga0187848_10323746	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	641	Open in IMG/M
3300018014\|Ga0187860_1188676	All Organisms → cellular organisms → Bacteria	853	Open in IMG/M
3300018017\|Ga0187872_10105906	All Organisms → cellular organisms → Bacteria → Acidobacteria	1400	Open in IMG/M
3300018017\|Ga0187872_10436493	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	550	Open in IMG/M
3300018017\|Ga0187872_10488970	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300018018\|Ga0187886_1360180	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	536	Open in IMG/M
3300018026\|Ga0187857_10335376	All Organisms → cellular organisms → Bacteria	687	Open in IMG/M
3300018026\|Ga0187857_10423796	All Organisms → cellular organisms → Bacteria → Acidobacteria	599	Open in IMG/M
3300018040\|Ga0187862_10435840	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	798	Open in IMG/M
3300018043\|Ga0187887_10130649	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1507	Open in IMG/M
3300018043\|Ga0187887_10634147	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	631	Open in IMG/M
3300018043\|Ga0187887_10918955	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	518	Open in IMG/M
3300018046\|Ga0187851_10332213	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	877	Open in IMG/M
3300018057\|Ga0187858_10612615	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	656	Open in IMG/M
3300018085\|Ga0187772_10768106	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum	694	Open in IMG/M
3300018086\|Ga0187769_10254973	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1306	Open in IMG/M
3300019785\|Ga0182022_1240098	All Organisms → cellular organisms → Bacteria	1463	Open in IMG/M
3300020581\|Ga0210399_10075160	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2738	Open in IMG/M
3300020581\|Ga0210399_10978714	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	682	Open in IMG/M
3300020581\|Ga0210399_11389334	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	549	Open in IMG/M
3300021168\|Ga0210406_10116088	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2265	Open in IMG/M
3300022524\|Ga0224534_1031163	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	1276	Open in IMG/M
3300022557\|Ga0212123_10230953	All Organisms → cellular organisms → Bacteria	1343	Open in IMG/M
3300024330\|Ga0137417_1059443	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	731	Open in IMG/M
3300025454\|Ga0208039_1020335	All Organisms → cellular organisms → Bacteria	1402	Open in IMG/M
3300025507\|Ga0208188_1136469	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	528	Open in IMG/M
3300025576\|Ga0208820_1097984	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	722	Open in IMG/M
3300025612\|Ga0208691_1113592	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	610	Open in IMG/M
3300025619\|Ga0207926_1116674	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	633	Open in IMG/M
3300025922\|Ga0207646_11169565	All Organisms → cellular organisms → Bacteria → Acidobacteria	675	Open in IMG/M
3300026271\|Ga0209880_1044510	Not Available	988	Open in IMG/M
3300026273\|Ga0209881_1023458	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1477	Open in IMG/M
3300026469\|Ga0257169_1078167	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	539	Open in IMG/M
3300026551\|Ga0209648_10329090	All Organisms → cellular organisms → Bacteria	1069	Open in IMG/M
3300026557\|Ga0179587_10183868	All Organisms → cellular organisms → Bacteria	1317	Open in IMG/M
3300026557\|Ga0179587_10675059	All Organisms → cellular organisms → Bacteria → Acidobacteria	680	Open in IMG/M
3300027480\|Ga0208993_1090682	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	559	Open in IMG/M
3300027521\|Ga0209524_1010698	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1831	Open in IMG/M
3300027604\|Ga0208324_1101028	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	806	Open in IMG/M
3300027767\|Ga0209655_10004536	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	4815	Open in IMG/M
3300027902\|Ga0209048_10359347	All Organisms → cellular organisms → Bacteria → Acidobacteria	1007	Open in IMG/M
3300027903\|Ga0209488_10289018	All Organisms → cellular organisms → Bacteria → Acidobacteria	1225	Open in IMG/M
3300030054\|Ga0302182_10076512	All Organisms → cellular organisms → Bacteria	1490	Open in IMG/M
3300030114\|Ga0311333_11956242	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	511	Open in IMG/M
3300031720\|Ga0307469_11237594	All Organisms → cellular organisms → Bacteria → Acidobacteria	707	Open in IMG/M
3300033891\|Ga0334811_098122	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	750	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	51.40%
Terrestrial	Environmental → Terrestrial	48.60%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	46.73%
Soil	Environmental → Terrestrial → Soil	44.86%
Sediment	Environmental → Aquatic → Sediment	3.74%
Peat	Environmental → Terrestrial → Peat	3.74%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.93%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	45.79%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	31.78%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	8.41%
Loam	Environmental → Terrestrial → Soil → Loam	4.67%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.74%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	3.74%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.93%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.93%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	27.10%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.43%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	18.69%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.61%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.67%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.74%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	3.74%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.74%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	3.74%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.80%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.93%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.93%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.93%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.93%

Habitat	Taxonomy	Distribution
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	18.69%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	16.82%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	12.15%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	10.28%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	6.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.67%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.74%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.74%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.74%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	2.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.87%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.87%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	1.87%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	1.87%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	0.93%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.93%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.93%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.93%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.93%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.93%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.93%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.93%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.93%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001154	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004468	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 74 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004612	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 53 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009519	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_150	Environmental	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009547	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_40	Environmental	Open in IMG/M
3300009552	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_150	Environmental	Open in IMG/M
3300009618	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_100	Environmental	Open in IMG/M
3300009621	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_150	Environmental	Open in IMG/M
3300009630	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_40	Environmental	Open in IMG/M
3300009632	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_40	Environmental	Open in IMG/M
3300009634	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_150	Environmental	Open in IMG/M
3300009636	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_150	Environmental	Open in IMG/M
3300009640	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_40	Environmental	Open in IMG/M
3300009643	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_40	Environmental	Open in IMG/M
3300009645	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40	Environmental	Open in IMG/M
3300009646	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_150	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011053	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 9 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011064	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 2 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300014155	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_60_metaG	Environmental	Open in IMG/M
3300014159	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaG	Environmental	Open in IMG/M
3300014162	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaG	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental	Open in IMG/M
3300014493	Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaG	Environmental	Open in IMG/M
3300014638	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_60_metaG	Environmental	Open in IMG/M
3300016705	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016750	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017929	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_100	Environmental	Open in IMG/M
3300017931	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_100	Environmental	Open in IMG/M
3300017935	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40	Environmental	Open in IMG/M
3300018014	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_40	Environmental	Open in IMG/M
3300018017	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_40	Environmental	Open in IMG/M
3300018018	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_150	Environmental	Open in IMG/M
3300018026	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_100	Environmental	Open in IMG/M
3300018040	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018046	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300019785	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (PacBio error correction)	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300022524	Peat soil microbial communities from Stordalen Mire, Sweden - 717 E1 20-24	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025454	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_150 (SPAdes)	Environmental	Open in IMG/M
3300025507	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_40 (SPAdes)	Environmental	Open in IMG/M
3300025576	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_40 (SPAdes)	Environmental	Open in IMG/M
3300025612	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10 (SPAdes)	Environmental	Open in IMG/M
3300025619	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026271	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-191 (SPAdes)	Environmental	Open in IMG/M
3300026273	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 3 DNA2013-193 (SPAdes)	Environmental	Open in IMG/M
3300026469	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-17-B	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027480	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_M3 (SPAdes)	Environmental	Open in IMG/M
3300027521	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027604	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG (SPAdes)	Environmental	Open in IMG/M
3300027767	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027902	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300030054	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_1	Environmental	Open in IMG/M
3300030114	I_Fen_E2 coassembly	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300033891	Peat soil microbial communities from Stordalen Mire, Sweden - 713 E-1-D	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12636J13339_10465782	3300001154	Forest Soil	AMLKKNAQQPVTYLLLKDRKQNVPVWYVIYGTSETDRKGIGVINATTGAFISAGK*
JGI12053J15887_101682372	3300001661	Forest Soil	SASTIARQHGGDALLKKDAQQPITYVLLKDRKLNVPVWYVIYGPSEIDRKGIGVINATTGTFVSAGK*
Ga0062384_1009523251	3300004082	Bog Forest Soil	YVLLKDPKGSVPVWYVIYGNSETDRKGIGVINATTGAFVRASK*
Ga0062387_1008155431	3300004091	Bog Forest Soil	GDAILKKDPQQPILYVLLKDRKLNLPVWYVIYGTSEKDRKGISVINATTGVFVSAGK*
Ga0062386_1010106251	3300004152	Bog Forest Soil	YVLLKDRKLNVPVWYVIYGASEKDRKGIGVINATTGDFISAGK*
Ga0068977_12117472	3300004468	Peatlands Soil	QQHGGDAIVKKDAQQPITYVLLKDRKLNVPVWYVIYGASEKDRKGIGVINATTGAFVSAGK*
Ga0068961_13167842	3300004612	Peatlands Soil	GGDAIVKKDPQQPVTYVLLKDRKQNGPVWYVIYGASEKDRKGIGVINATTGAFVSAGK*
Ga0066701_101397053	3300005552	Soil	LLLKDRKQNVPVWYVIYGTSEKDRKGISVINATTGAFVSAGK*
Ga0066700_108253271	3300005559	Soil	ITLQHGGEAILKKNAQQPITYLLLKDRKQNVPVWYVIYGISEKDRKGISVINATTGAFVSAGK*
Ga0075017_1005108571	3300006059	Watersheds	QQPVIYVLLKDRKQNVPVWYVIYGTSEKDRKGIGVINATTGAFVSAGK*
Ga0075019_104987913	3300006086	Watersheds	AQQPVIYVLLKDRKQNVPVWYVIYGTSEKDRKGIGVINATTGAFVSAGK*
Ga0075015_1000882633	3300006102	Watersheds	LKKDAQQPVIYVLLKDRKQNVPVWYVIYGTSEKDRKGIGVINATTGAFVSAGK*
Ga0075014_1000901763	3300006174	Watersheds	LKDRKQNVPVWYVIYGTSEKDRKGIGVINATTGAFVSAGK*
Ga0099791_105669471	3300007255	Vadose Zone Soil	FEITLQHGGEAILKKNAQQPVTYLLLKDRKQNVPVWYVIYGTSETDRKGIGVINATTGAFVSAGK*
Ga0116108_11049283	3300009519	Peatland	YVLLKDRKQNVPVWYVIYGTSEKDRKGIGVINATTGAFVSAK*
Ga0116221_10430354	3300009523	Peatlands Soil	PKQSIMYVLLKDRKLNVPVWYVIYGTSEKDKKGIGVINATTGAFITAK*
Ga0116220_105701461	3300009525	Peatlands Soil	TAQQHGGDAILKKDPKQSIMYVLLKDRKVNVPVWYVIYGTSETDRKGIGVINATTGAFITAR*
Ga0116136_11659792	3300009547	Peatland	VLLKDRKQNVPVWYVIYGTSEKDRKGIGVINATTGAFVSAGK*
Ga0116138_10195705	3300009552	Peatland	PIMYVLLKDRKQNVPVWYVIYGTSETDRKGIGVINATTGAFVRAGK*
Ga0116127_10893231	3300009618	Peatland	HGGDAIVKKNPQQPITYVLLKDKKQNLVWYVIYGTSEKDRKGIGVINATTGAFISAGK*
Ga0116116_11215731	3300009621	Peatland	KDRKQNVPVWYVIYGTSEKDRKGIGVINATTGAFVSAGK*
Ga0116114_10700203	3300009630	Peatland	LLRDPKQNVPDWYVIYGTSATDRKGIGIINATTGAFVSAK*
Ga0116102_11529842	3300009632	Peatland	TDKAFALTLQHGGDAILKKDPQQPVTYVLLKDRKQNVPVWYVIYGTSEKDRKGIGVINATTGAFVSAK*
Ga0116124_10591003	3300009634	Peatland	DPKQNVPDWYVIYGTSATDRKGIGIINATTGAFVSAK*
Ga0116124_12411991	3300009634	Peatland	PKQNVPVWYVIYGTSETDRRGIGVINATTGAFVSAGK*
Ga0116112_12174183	3300009636	Peatland	NNAQQPITYVLLKDRKLNVPVWYVIYGSSETDRKGIGVINATTGAFVSAGK*
Ga0116126_10408991	3300009640	Peatland	VMYLLLRDPKQNVPVWYVIYGTSATDRKGIGVINATTGAFVSAK*
Ga0116110_12197761	3300009643	Peatland	NVPVWYVIYGTSATDRKGIGVINATTGAFVRAGK*
Ga0116106_11479853	3300009645	Peatland	NVPVWYVIYGTSEKERKGIGVINATTGAFVSAGK*
Ga0116106_11809173	3300009645	Peatland	DAQQPIMYVLLKDRKQNVPVWYVIYGTSETDRKGIGVINATTGAFVSAGK*
Ga0116106_12443651	3300009645	Peatland	MYVLLKDRKLNVPVWYVIYGTSEKDKKGIGVINATTGAFITAR*
Ga0116132_12631931	3300009646	Peatland	QNVPVWYVIYGTSEKDRKGIGVINATTGAFVSAGK*
Ga0116216_100239495	3300009698	Peatlands Soil	AIVKKDPQQPVTYVLLKDRKQNGPVWYVIYGASEKDRKGIGVINATTGAFVSAGK*
Ga0074046_103104951	3300010339	Bog Forest Soil	TDKAFALSQQHGGDAILKKDAQQPIAYVLLKDRKLNVPVWYVIYGTSETDRKGIGVVNATSGAFVSASK*
Ga0074044_107548761	3300010343	Bog Forest Soil	HGGDAIVKKDAQQPITYVLLKDRKLNVPVWYVIYGASEKDRKGIGVINATTGDFISAGK*
Ga0074044_110258931	3300010343	Bog Forest Soil	KDAKQSVMYVLLKDRKMNVPVWYVIYGTSEKDKKGIGVINATTGAFITAR*
Ga0136449_1013284641	3300010379	Peatlands Soil	PKQNVPDWYVIYGTSATDRKGIGIINATTGAFVSAK*
Ga0136449_1018574981	3300010379	Peatlands Soil	QSVMYVLLKDRKLNVPVWYVIYGTSEKDKKGIGVINATTGAFITAR*
Ga0136449_1037347152	3300010379	Peatlands Soil	VLLKDRKLNVPVWYVIYGTSEKDKKGIGVINATTGAFITAR*
Ga0138531_1887481	3300011053	Peatlands Soil	EAIVKKDAKQPITYVLLKDRKQNVPVWYVIYGTSETDRKGIGVINATTGAFITAR*
Ga0138525_11009021	3300011064	Peatlands Soil	GAIVKKDPQQPVTYVLLKDRKQNGPVWYVIYGASEKDRKGIGVINATTGAFVSAGK*
Ga0137392_102359021	3300011269	Vadose Zone Soil	ITREHGGEAILKKNAQQPITYVLLKDRKQNVPVWYVIYGTSEKDRKGICVINATTGAFVSAGK*
Ga0137383_104499962	3300012199	Vadose Zone Soil	ITLQHGGEAILTKNAQQPITYLLLKDRKQNVPVWYVIYGISEKDRKGISVINATTGAFVSAGK*
Ga0137363_112661122	3300012202	Vadose Zone Soil	QHGGEAILKKNAQQPIVYLLLKDRKQNVPVWYVIYGTSEKDRKGIGVINATTGAFVSAGK
Ga0137399_114793981	3300012203	Vadose Zone Soil	ILKKNAQQPVTYLLLKDRKQNVPVWYVIYGISEKDRKGISVINATTGAFVRAGK*
Ga0137362_117748311	3300012205	Vadose Zone Soil	KNAQQPVMYLLLKDRKQNVPVWYVIYGTSETDRKGIGVINATTGAFVRAGK*
Ga0137361_104161582	3300012362	Vadose Zone Soil	KKNAQQPITYLLLKDRKQNVPVWYVIYGISEKDRKGISVINATTGAFVSAGK*
Ga0137358_107792051	3300012582	Vadose Zone Soil	TDKAFEITLQHGGEAILKKNAQQPITYLLLKDRKQNVPVWYVIYGTSEKDRKGISVINATTGAFVSASK*
Ga0137398_106885291	3300012683	Vadose Zone Soil	ITLQHGGEAILKKNAQQPITYLLLKDRKQNVPVWYVIYGTSEKDRKGISVINATTGAFVSASK*
Ga0181524_103989521	3300014155	Bog	QHGGEAILKKDPKQSIMYVLLKDRKLNVPVWYVIYGTSEKDKKGIGVINATTGAFITAR*
Ga0181530_100590793	3300014159	Bog	LNVPVWYVIYGTSEKDKKGIGVINATTGAFITAR*
Ga0181538_100058291	3300014162	Bog	QHGGDAILKKDPKQPIMYLLLRDPKQNVPDWYVIYGTSATDRKGIGIINATTGAFVSAK*
Ga0181538_104624902	3300014162	Bog	VKKDAKQPVTYVLLKDKKVNVPVWYVIYGASEADRKGIGVINATTGAFVSAGK*
Ga0181532_102339413	3300014164	Bog	QQHGGDAILKKDPKQPIMYLLLRDPKQNVPDWYVIYGTSATDRKGIGIINATTGAFVSAK
Ga0181523_102631083	3300014165	Bog	YLLLRDPKQNVPDWYVIYGTSATDRKGIGIINATTGAFVSAK*
Ga0182016_100331131	3300014493	Bog	LNVPVWYVIYGTSESSRKGIGVINAATGGFVSAGK*
Ga0181536_102001743	3300014638	Bog	DRKQNVPVWYVIYGTSEKDRKGIGVINATTGAFISAGK*
Ga0181507_10541862	3300016705	Peatland	DAILKKDPKQPIMYLLLRDPKQNVPDWYVIYGTSATDRKGIGIINATTGAFVSAK
Ga0181505_102900081	3300016750	Peatland	QQPITYVLLKDTKHNVPVWYVIYGASEKDRKGIGVINATTGAFVSAGK
Ga0187849_13361872	3300017929	Peatland	VLLKDRKQNVPVWYVIYGTSEKDRKGIGVINATTGAFVSAGK
Ga0187877_13798261	3300017931	Peatland	MYLLLRDTKQNVPVWYVIYGTSATDRKGIGVINATTGAFVSAK
Ga0187848_103237461	3300017935	Peatland	ILKNNAQQPITYVLLKDRKLNVPVWYVIYGSSETDRKGIGVINATTGAFVSAGK
Ga0187860_11886763	3300018014	Peatland	LLKDRKQNVPVWYVIYGTSEKDRKGIGVINATTGAFVSAK
Ga0187872_101059061	3300018017	Peatland	VMYLLLRDPKQNVPVWYVIYGTSATDRKGIGVINATTGAFVSAK
Ga0187872_104364931	3300018017	Peatland	QNVPVWYVIYGTSEKDRKGIGVINATTGAFVSAGK
Ga0187872_104889701	3300018017	Peatland	GDAILKKDPQQPVTYVLLKDRKQNVPVWYVIYGTSEKDRKGIGVINATTGAFVSAK
Ga0187886_13601801	3300018018	Peatland	YVLLKDRKQNVPVWYVIYGTSEKDRKGIGVINATTGAFVSAGK
Ga0187857_103353761	3300018026	Peatland	DPKQNVPVWYVIYGTSETDRKGIGVINATTGAFVRAGK
Ga0187857_104237961	3300018026	Peatland	KDAKQPVMYLLLRDPKQNVPVWYVIYGTSATDRKGIGVINATTGAFVSAK
Ga0187862_104358402	3300018040	Peatland	LKDKKVNVPVWYVIYGASEADRKGIGVINATTGAFVSAGK
Ga0187887_101306492	3300018043	Peatland	GGDAMLKKDPKQPIMYLLLRDPKQNVPDWYVIYGTSATDRKGIGIINATTGAFVSAK
Ga0187887_106341472	3300018043	Peatland	YKIAQEHGGEAILKKDPQQPITYVLLKEPKHNVPVWYVIYGASEKDRKGIGVINATTGAFVSAGK
Ga0187887_109189551	3300018043	Peatland	QQSITYVLLKDRKQNLPVWYVIYGTSEKDRKGIGVINANTGAFVSAGK
Ga0187851_103322132	3300018046	Peatland	KKDPQQPITYVLLKEPKHNVPVWYVIYGASEKDRKGIGVINATTGAFVSAGK
Ga0187858_106126151	3300018057	Peatland	DAILKNNAQQPITYVLLKDRKLNVPVWYVIYGSSETDRKGIGVINATTGAFVSAGK
Ga0187772_107681062	3300018085	Tropical Peatland	YVLLKDRKLNIPVWYVIYGTSEKDRKGIGVINATTGAFVSAGK
Ga0187769_102549731	3300018086	Tropical Peatland	TGEQHGGEAILKKDPQQPIMYVLLKDRNLNVPVWYVIYGTSEKDRKGIGVINATTGAFVSAK
Ga0182022_12400981	3300019785	Fen	ITYYLLKEPKQNVPFWYVIYGTSATNRKGIGVINATTGDFVSAK
Ga0210399_100751604	3300020581	Soil	YLLLKDRKHNVPVWYVIYGSSEKDRKGISVINATTGAFMSAGK
Ga0210399_109787141	3300020581	Soil	GEAILKKNAQQPITYLLLKDRKQNVPVWYVIYGTSEKDRKGIGVINATTGAFVSAGK
Ga0210399_113893341	3300020581	Soil	EITRQHGGDAILKKNAQQPVTYLLLKDRKQNVPVWYVIYGTSEKDRKGISVINATTGAFISAGK
Ga0210406_101160884	3300021168	Soil	QQPVTYLLLKDRKQNVPVWYVIYGTSEKDRKGISVINATTGAFISAGK
Ga0224534_10311631	3300022524	Soil	LKDKKVNVPVWYVIYGASEADRKGIGVINATTGAFISAGK
Ga0212123_102309532	3300022557	Iron-Sulfur Acid Spring	PVIYVLLKDRKQNVPVWYVIYGTSETNRKGIGVINATTGAFVSAGK
Ga0137417_10594431	3300024330	Vadose Zone Soil	GRSPILKKNAQQPVTYLLLKDRKQNVPVWYVIYGTSETDRKGIGVINATTGAFVSAGK
Ga0208039_10203351	3300025454	Peatland	NAQQPITYVLLKDRKLNVPVWYVIYGSSETDRKGIGVINATTGAFVSAGK
Ga0208188_11364691	3300025507	Peatland	KQNVPVWYVIYGTSEKDRKGIGVINATTGAFVSAGK
Ga0208820_10979843	3300025576	Peatland	AILKNNAQQPITYVLLKDRKLNVPVWYVIYGSSETDRKGIGVINATTGAFVSAGK
Ga0208691_11135922	3300025612	Peatland	GGDAILKKDAKQPITYVLLKDRKLNVPVWYVIYGTSEKDRKGIGVVNATTGAFISAGK
Ga0207926_11166741	3300025619	Arctic Peat Soil	ILKKNAQQPITYILLKDRKQNVPVWYVIYGTSETDRKGIGVINATTGAFVSAGK
Ga0207646_111695651	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	QHGGAAIVKKGAKQPVRYLLLKDRKQNVPVWYVIYGTSETDRKGIGVINATTGAFVSAGK
Ga0209880_10445102	3300026271	Soil	LKDRKQNVPVWYVIYGTSETDRKGIGVVNATTGAFVSAGK
Ga0209881_10234581	3300026273	Soil	AKQPIMYVLLKDRKQNVPVWYVIYGTSETDRKGIGVVNATTGAFVSAGK
Ga0257169_10781671	3300026469	Soil	TYVLLKDRKQNVPVWYVVYGTSEKDRKGICLINATTGAFVSAGK
Ga0209648_103290901	3300026551	Grasslands Soil	PITYLLLKDRKQNVPVWYVIYGTSETDRKGISVINATTGAFMRAGK
Ga0179587_101838681	3300026557	Vadose Zone Soil	LQHGGEAILKKNAQQPVMYLLLKDRKQNVPVWYVIYGTSETDRKGIGVINATTGAFVSAG
Ga0179587_106750591	3300026557	Vadose Zone Soil	QAILKKNAQQPVTYLLLKDRKQNVPVWYVIYGTSEKDRKGISVINATTGAFVSAGK
Ga0208993_10906821	3300027480	Forest Soil	PVIYVLLKDRKQNMPVWYVIYGTSETNRKGIGVINATTGAFVSAGK
Ga0209524_10106981	3300027521	Forest Soil	TDTDKAFEITRQHGGDAILKKNAQQPITYLLLKDRKQNVPVWYVIYGTSEKDRKGISVINATTGAFISAGK
Ga0208324_11010282	3300027604	Peatlands Soil	KDRKLNVPVWYVIYGTSEKDKKGIGVINATTGAFITAR
Ga0209655_100045366	3300027767	Bog Forest Soil	VLLKDPKGSVPVWYVIYGTSETDRKGIGVINATTGAFVRASK
Ga0209048_103593471	3300027902	Freshwater Lake Sediment	TYVLLKDRKLNVPVWYVIYGTSEKDRKGIGVINATTGAFVSAGK
Ga0209488_102890181	3300027903	Vadose Zone Soil	IYVLLKDRKQNMPVWYVIYGTSETNRKAIGVINATTGAFVSAAK
Ga0302182_100765124	3300030054	Palsa	QQPVIYVLLKDRKQNVPVWYVIYGTSEKDRKGIGVINATTGIFVSAGK
Ga0311333_119562421	3300030114	Fen	PQQGITYYLLKEPKQNVPFWYVIYGTSATNRKGIGVINATTGDFVSAK
Ga0307469_112375941	3300031720	Hardwood Forest Soil	AQQPVTYLLLKDRKQNVPVWYVIYGTSETDRKGIGVINATTGAFVSAGK
Ga0334811_098122_1_132	3300033891	Soil	TYVLLKDRKQNVPVWYVIYGASEKDRKGIGVINATTGAFVRAG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F092545

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences