Metagenome / Metatranscriptome Family F092541

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F092541
Family Type	Metagenome / Metatranscriptome
Number of Sequences	107
Average Sequence Length	44 residues
Representative Sequence	LFSLRMPGSEVSLDDPQATKIPFGVAMALTVLFYGMGRAMGKL
Number of Associated Samples	92
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.93 %
% of genes near scaffold ends (potentially truncated)	98.13 %
% of genes from short scaffolds (< 2000 bps)	86.92 %
Associated GOLD sequencing projects	86
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.44

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.131 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (11.215 % of family members)
Environment Ontology (ENVO)	Unclassified (29.907 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (44.860 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 28.17% β-sheet: 0.00% Coil/Unstructured: 71.83%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.44
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.44
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF07811	TadE	86.92
PF13400	Tad	7.48
PF03721	UDPG_MGDP_dh_N	0.93
PF13432	TPR_16	0.93
PF00694	Aconitase_C	0.93
PF00702	Hydrolase	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG0240	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.93
COG0677	UDP-N-acetyl-D-mannosaminuronate dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	0.93
COG1004	UDP-glucose 6-dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	0.93
COG1250	3-hydroxyacyl-CoA dehydrogenase	Lipid transport and metabolism [I]	0.93
COG1893	Ketopantoate reductase	Coenzyme transport and metabolism [H]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.13 %
Unclassified	root	N/A	1.87 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.13 %
Unclassified	root	N/A	1.87 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.13 %
Unclassified	root	N/A	1.87 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	87.85 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.80 %
Unclassified	root	N/A	1.87 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.93 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	4.67 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.80 %
Unclassified	root	N/A	1.87 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.93 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.67 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.80 %
Unclassified	root	N/A	1.87 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.93 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.67 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.80 %
Unclassified	root	N/A	1.87 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.93 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.67 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.80 %
Unclassified	root	N/A	1.87 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.93 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.67 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.80 %
Unclassified	root	N/A	1.87 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.93 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001593\|JGI12635J15846_10140867	All Organisms → cellular organisms → Bacteria → Acidobacteria	1669	Open in IMG/M
3300001593\|JGI12635J15846_10239697	All Organisms → cellular organisms → Bacteria → Proteobacteria	1171	Open in IMG/M
3300004091\|Ga0062387_100378762	All Organisms → cellular organisms → Bacteria → Acidobacteria	945	Open in IMG/M
3300004092\|Ga0062389_100548321	All Organisms → cellular organisms → Bacteria	1312	Open in IMG/M
3300004152\|Ga0062386_101016146	All Organisms → cellular organisms → Bacteria → Acidobacteria	687	Open in IMG/M
3300004476\|Ga0068966_1426113	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	517	Open in IMG/M
3300004633\|Ga0066395_10453549	All Organisms → cellular organisms → Bacteria → Acidobacteria	731	Open in IMG/M
3300004635\|Ga0062388_100826234	All Organisms → cellular organisms → Bacteria → Acidobacteria	881	Open in IMG/M
3300005526\|Ga0073909_10147217	All Organisms → cellular organisms → Bacteria → Proteobacteria	979	Open in IMG/M
3300005538\|Ga0070731_10395030	All Organisms → cellular organisms → Bacteria → Acidobacteria	919	Open in IMG/M
3300005569\|Ga0066705_10501830	All Organisms → cellular organisms → Bacteria → Acidobacteria	759	Open in IMG/M
3300006052\|Ga0075029_101224250	All Organisms → cellular organisms → Bacteria → Acidobacteria	525	Open in IMG/M
3300006059\|Ga0075017_100619689	All Organisms → cellular organisms → Bacteria → Acidobacteria	828	Open in IMG/M
3300006059\|Ga0075017_100785825	All Organisms → cellular organisms → Bacteria → Acidobacteria	735	Open in IMG/M
3300006059\|Ga0075017_101632083	All Organisms → cellular organisms → Bacteria → Acidobacteria	509	Open in IMG/M
3300006086\|Ga0075019_10516531	All Organisms → cellular organisms → Bacteria → Acidobacteria	742	Open in IMG/M
3300006086\|Ga0075019_10687220	All Organisms → cellular organisms → Bacteria → Acidobacteria	646	Open in IMG/M
3300006174\|Ga0075014_100213705	All Organisms → cellular organisms → Bacteria	978	Open in IMG/M
3300006864\|Ga0066797_1129343	All Organisms → cellular organisms → Bacteria → Acidobacteria	883	Open in IMG/M
3300009038\|Ga0099829_10272831	All Organisms → cellular organisms → Bacteria → Acidobacteria	1383	Open in IMG/M
3300009038\|Ga0099829_11253460	All Organisms → cellular organisms → Bacteria → Acidobacteria	613	Open in IMG/M
3300009088\|Ga0099830_10165386	All Organisms → cellular organisms → Bacteria → Acidobacteria	1711	Open in IMG/M
3300009088\|Ga0099830_11218374	All Organisms → cellular organisms → Bacteria → Acidobacteria	625	Open in IMG/M
3300009089\|Ga0099828_10078747	All Organisms → cellular organisms → Bacteria → Acidobacteria	2809	Open in IMG/M
3300009089\|Ga0099828_10257228	All Organisms → cellular organisms → Bacteria → Acidobacteria	1566	Open in IMG/M
3300009519\|Ga0116108_1264076	All Organisms → cellular organisms → Bacteria → Acidobacteria	502	Open in IMG/M
3300009520\|Ga0116214_1207394	All Organisms → cellular organisms → Bacteria → Acidobacteria	738	Open in IMG/M
3300009521\|Ga0116222_1513691	All Organisms → cellular organisms → Bacteria → Acidobacteria	525	Open in IMG/M
3300009524\|Ga0116225_1009180	All Organisms → cellular organisms → Bacteria	5495	Open in IMG/M
3300009631\|Ga0116115_1003563	All Organisms → cellular organisms → Bacteria → Acidobacteria	5656	Open in IMG/M
3300009632\|Ga0116102_1068435	All Organisms → cellular organisms → Bacteria → Acidobacteria	1071	Open in IMG/M
3300009634\|Ga0116124_1047307	All Organisms → cellular organisms → Bacteria → Acidobacteria	1276	Open in IMG/M
3300009635\|Ga0116117_1094628	All Organisms → cellular organisms → Bacteria → Acidobacteria	746	Open in IMG/M
3300009645\|Ga0116106_1044588	All Organisms → cellular organisms → Bacteria → Acidobacteria	1491	Open in IMG/M
3300009665\|Ga0116135_1362126	All Organisms → cellular organisms → Bacteria → Acidobacteria	582	Open in IMG/M
3300009824\|Ga0116219_10334333	All Organisms → cellular organisms → Bacteria → Acidobacteria	850	Open in IMG/M
3300010341\|Ga0074045_10035521	All Organisms → cellular organisms → Bacteria → Acidobacteria	3719	Open in IMG/M
3300010341\|Ga0074045_11078136	All Organisms → cellular organisms → Bacteria → Acidobacteria	502	Open in IMG/M
3300010343\|Ga0074044_10630716	All Organisms → cellular organisms → Bacteria → Acidobacteria	699	Open in IMG/M
3300010379\|Ga0136449_102153836	All Organisms → cellular organisms → Bacteria → Acidobacteria	816	Open in IMG/M
3300011269\|Ga0137392_10586478	All Organisms → cellular organisms → Bacteria → Acidobacteria	925	Open in IMG/M
3300011270\|Ga0137391_10258673	All Organisms → cellular organisms → Bacteria → Acidobacteria	1507	Open in IMG/M
3300012350\|Ga0137372_11125181	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	537	Open in IMG/M
3300012971\|Ga0126369_10230692	All Organisms → cellular organisms → Bacteria → Acidobacteria	1808	Open in IMG/M
3300014159\|Ga0181530_10431141	All Organisms → cellular organisms → Bacteria → Acidobacteria	666	Open in IMG/M
3300014164\|Ga0181532_10384003	All Organisms → cellular organisms → Bacteria → Acidobacteria	782	Open in IMG/M
3300014165\|Ga0181523_10568747	All Organisms → cellular organisms → Bacteria → Acidobacteria	623	Open in IMG/M
3300014167\|Ga0181528_10029054	All Organisms → cellular organisms → Bacteria → Acidobacteria	3150	Open in IMG/M
3300014169\|Ga0181531_10207638	All Organisms → cellular organisms → Bacteria → Acidobacteria	1190	Open in IMG/M
3300014201\|Ga0181537_10649152	All Organisms → cellular organisms → Bacteria → Acidobacteria	719	Open in IMG/M
3300014494\|Ga0182017_10548505	Not Available	706	Open in IMG/M
3300014502\|Ga0182021_11841877	All Organisms → cellular organisms → Bacteria → Acidobacteria	729	Open in IMG/M
3300014638\|Ga0181536_10017082	All Organisms → cellular organisms → Bacteria	6143	Open in IMG/M
3300014654\|Ga0181525_10635277	All Organisms → cellular organisms → Bacteria → Acidobacteria	597	Open in IMG/M
3300016702\|Ga0181511_1258326	All Organisms → cellular organisms → Bacteria → Acidobacteria	629	Open in IMG/M
3300016730\|Ga0181515_1028379	All Organisms → cellular organisms → Bacteria → Acidobacteria	604	Open in IMG/M
3300017933\|Ga0187801_10432246	All Organisms → cellular organisms → Bacteria → Acidobacteria	550	Open in IMG/M
3300017934\|Ga0187803_10138323	All Organisms → cellular organisms → Bacteria → Acidobacteria	957	Open in IMG/M
3300017934\|Ga0187803_10483129	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	505	Open in IMG/M
3300017935\|Ga0187848_10364859	All Organisms → cellular organisms → Bacteria → Acidobacteria	597	Open in IMG/M
3300017955\|Ga0187817_10723992	All Organisms → cellular organisms → Bacteria → Acidobacteria	635	Open in IMG/M
3300017955\|Ga0187817_10796061	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	604	Open in IMG/M
3300018008\|Ga0187888_1064009	All Organisms → cellular organisms → Bacteria → Proteobacteria	1646	Open in IMG/M
3300018017\|Ga0187872_10221463	All Organisms → cellular organisms → Bacteria → Acidobacteria	862	Open in IMG/M
3300018033\|Ga0187867_10597559	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	604	Open in IMG/M
3300018044\|Ga0187890_10312120	All Organisms → cellular organisms → Bacteria → Acidobacteria	883	Open in IMG/M
3300018044\|Ga0187890_10884847	Not Available	503	Open in IMG/M
3300018086\|Ga0187769_10477575	All Organisms → cellular organisms → Bacteria → Acidobacteria	940	Open in IMG/M
3300018088\|Ga0187771_11236476	All Organisms → cellular organisms → Bacteria → Acidobacteria	634	Open in IMG/M
3300018089\|Ga0187774_10266538	All Organisms → cellular organisms → Bacteria → Acidobacteria	979	Open in IMG/M
3300019888\|Ga0193751_1054260	All Organisms → cellular organisms → Bacteria → Acidobacteria	1709	Open in IMG/M
3300020579\|Ga0210407_10024559	All Organisms → cellular organisms → Bacteria → Acidobacteria	4481	Open in IMG/M
3300020579\|Ga0210407_10055763	All Organisms → cellular organisms → Bacteria → Acidobacteria	2954	Open in IMG/M
3300020580\|Ga0210403_11060447	All Organisms → cellular organisms → Bacteria → Acidobacteria	631	Open in IMG/M
3300021170\|Ga0210400_10055578	All Organisms → cellular organisms → Bacteria → Acidobacteria	3086	Open in IMG/M
3300021170\|Ga0210400_11003564	All Organisms → cellular organisms → Bacteria → Acidobacteria	678	Open in IMG/M
3300021181\|Ga0210388_11071141	All Organisms → cellular organisms → Bacteria → Acidobacteria	689	Open in IMG/M
3300021406\|Ga0210386_10540706	All Organisms → cellular organisms → Bacteria → Acidobacteria	1007	Open in IMG/M
3300021477\|Ga0210398_10286075	All Organisms → cellular organisms → Bacteria → Acidobacteria	1344	Open in IMG/M
3300027583\|Ga0209527_1027082	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1280	Open in IMG/M
3300027660\|Ga0209736_1075820	All Organisms → cellular organisms → Bacteria → Acidobacteria	929	Open in IMG/M
3300027803\|Ga0209910_10011911	All Organisms → cellular organisms → Bacteria → Acidobacteria	713	Open in IMG/M
3300027825\|Ga0209039_10169678	All Organisms → cellular organisms → Bacteria → Acidobacteria	900	Open in IMG/M
3300027846\|Ga0209180_10138642	All Organisms → cellular organisms → Bacteria	1399	Open in IMG/M
3300027875\|Ga0209283_10031681	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3302	Open in IMG/M
3300027875\|Ga0209283_10041752	All Organisms → cellular organisms → Bacteria → Acidobacteria	2894	Open in IMG/M
3300027898\|Ga0209067_10300361	All Organisms → cellular organisms → Bacteria → Acidobacteria	882	Open in IMG/M
3300028047\|Ga0209526_10464274	All Organisms → cellular organisms → Bacteria → Acidobacteria	831	Open in IMG/M
3300028560\|Ga0302144_10255082	All Organisms → cellular organisms → Bacteria → Acidobacteria	568	Open in IMG/M
3300028731\|Ga0302301_1055300	All Organisms → cellular organisms → Bacteria → Acidobacteria	1073	Open in IMG/M
3300028747\|Ga0302219_10078312	All Organisms → cellular organisms → Bacteria → Acidobacteria	1240	Open in IMG/M
3300028785\|Ga0302201_10030840	All Organisms → cellular organisms → Bacteria → Acidobacteria	2866	Open in IMG/M
3300028806\|Ga0302221_10184973	All Organisms → cellular organisms → Bacteria → Acidobacteria	913	Open in IMG/M
3300028866\|Ga0302278_10044168	All Organisms → cellular organisms → Bacteria → Acidobacteria	2848	Open in IMG/M
3300029882\|Ga0311368_10282528	All Organisms → cellular organisms → Bacteria → Acidobacteria	1266	Open in IMG/M
3300029944\|Ga0311352_10102643	All Organisms → cellular organisms → Bacteria → Acidobacteria	2517	Open in IMG/M
3300029956\|Ga0302150_10081287	All Organisms → cellular organisms → Bacteria → Acidobacteria	1252	Open in IMG/M
3300029993\|Ga0302304_10342389	All Organisms → cellular organisms → Bacteria → Acidobacteria	544	Open in IMG/M
3300030058\|Ga0302179_10127598	All Organisms → cellular organisms → Bacteria → Acidobacteria	1123	Open in IMG/M
3300030520\|Ga0311372_11752219	All Organisms → cellular organisms → Bacteria → Acidobacteria	745	Open in IMG/M
3300030659\|Ga0316363_10119553	All Organisms → cellular organisms → Bacteria	1154	Open in IMG/M
3300031231\|Ga0170824_127219133	All Organisms → cellular organisms → Bacteria	1579	Open in IMG/M
3300031962\|Ga0307479_10355429	All Organisms → cellular organisms → Bacteria → Acidobacteria	1448	Open in IMG/M
3300031962\|Ga0307479_10838852	All Organisms → cellular organisms → Bacteria → Acidobacteria	893	Open in IMG/M
3300032180\|Ga0307471_100623441	All Organisms → cellular organisms → Bacteria → Acidobacteria	1239	Open in IMG/M
3300032782\|Ga0335082_11244478	All Organisms → cellular organisms → Bacteria → Acidobacteria	612	Open in IMG/M
3300033158\|Ga0335077_10405276	All Organisms → cellular organisms → Bacteria → Acidobacteria	1464	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	61.68%
Aquatic	Environmental → Aquatic	38.32%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	50.47%
Freshwater	Environmental → Aquatic → Freshwater	30.84%
Peat	Environmental → Terrestrial → Peat	11.21%
Sediment	Environmental → Aquatic → Sediment	7.48%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	33.64%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	30.84%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	11.21%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	11.21%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	7.48%
Loam	Environmental → Terrestrial → Soil → Loam	5.61%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.50%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	19.63%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	11.21%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	11.21%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	7.48%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	7.48%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	6.54%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.61%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	4.67%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	3.74%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.93%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	11.21%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	7.48%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	7.48%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	7.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.48%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	7.48%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	6.54%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	6.54%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	4.67%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	4.67%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.67%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	3.74%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.80%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.80%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	2.80%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.87%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.87%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	1.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.93%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.93%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.93%
Thawing Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Thawing Permafrost	0.93%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.93%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004476	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 58 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006864	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 3 DNA2013-193	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009519	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_150	Environmental	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009631	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_100	Environmental	Open in IMG/M
3300009632	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_40	Environmental	Open in IMG/M
3300009634	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_150	Environmental	Open in IMG/M
3300009635	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_10	Environmental	Open in IMG/M
3300009645	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40	Environmental	Open in IMG/M
3300009665	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014159	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaG	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental	Open in IMG/M
3300014167	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaG	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300014494	Permafrost microbial communities from Stordalen Mire, Sweden - 712E3D metaG	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014638	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_60_metaG	Environmental	Open in IMG/M
3300014654	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaG	Environmental	Open in IMG/M
3300016702	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016730	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017934	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3	Environmental	Open in IMG/M
3300017935	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300018008	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_40	Environmental	Open in IMG/M
3300018017	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_40	Environmental	Open in IMG/M
3300018033	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10	Environmental	Open in IMG/M
3300018044	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300018089	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MG	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300027583	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027660	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027803	Thawing permafrost microbial communities from the Arctic, studying carbon transformations - Permafrost 712S3S	Environmental	Open in IMG/M
3300027825	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028560	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E2_2	Environmental	Open in IMG/M
3300028731	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E1_2	Environmental	Open in IMG/M
3300028747	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_2	Environmental	Open in IMG/M
3300028785	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N3_2	Environmental	Open in IMG/M
3300028806	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_1	Environmental	Open in IMG/M
3300028866	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N3_2	Environmental	Open in IMG/M
3300029882	III_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029944	II_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029956	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N1_2	Environmental	Open in IMG/M
3300029993	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E2_2	Environmental	Open in IMG/M
3300030058	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_1	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030659	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG (v2)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12635J15846_101408671	3300001593	Forest Soil	LLAALFSLHMPGQELSLDDPHSTKIPFGVAMALTVVFYGIGIVLGKL*
JGI12635J15846_102396971	3300001593	Forest Soil	HLLAALFSLRMPGYEVSLDDPQSTKIPFGAAMALTVFLYGMGRAMGKI*
Ga0062387_1003787621	3300004091	Bog Forest Soil	MAHLLAALFSLRMPGSEVSLDDPQSTKIPFGVAMAVAVLFYGMGRAMGKM*
Ga0062389_1005483211	3300004092	Bog Forest Soil	MGRLLGAMLSLNMPGSEVSLDDPQSTKIPFGVAMALTVLAYGAAKAMGKL*
Ga0062386_1010161462	3300004152	Bog Forest Soil	AALFSLRMPGSEVSLDDPKSTKIPFGVAMALTVVVYGMGRMLGICKL*
Ga0068966_14261132	3300004476	Peatlands Soil	LNIAHMLAALFSLRMPGSEVSLDDPQSTKIPFGVAMALTVLFYGMGRAMGKV*
Ga0066395_104535492	3300004633	Tropical Forest Soil	LRVPGGEVSLDSPQSTKIPFGVAMAATVVILGAGRVMGKL*
Ga0062388_1008262341	3300004635	Bog Forest Soil	LNMAHLLAALFSLRMPGSEVSLDDPRSTRIPFGVAMALAVLFFGMGRALGKL*
Ga0073909_101472173	3300005526	Surface Soil	RMLAAFFSLRMPGPEVSLDSPQSTKIPFGVAMAITVLLFGVGRVIGKL*
Ga0070731_103950303	3300005538	Surface Soil	LFTLRMPGREVSLDDPNSTKIPFGVAMALAVLLYGVGRATGRVQ*
Ga0066705_105018301	3300005569	Soil	NIVYMLAAFFRLRMPGTEVSLDNPQSTKIPLGVAMAFAVVVLGVGKAIGKI*
Ga0075029_1012242502	3300006052	Watersheds	AYEVSLDDPRSARIPFGVAMAMTVVFCGMARMIGK*
Ga0075017_1006196891	3300006059	Watersheds	IVHMLAAFFSLRMPAFEVSLDNPQSTKIPFGVAMAAAVVLYGVGRAVGKL*
Ga0075017_1007858252	3300006059	Watersheds	LFSLRMPGEEVSLDNPESTKIPFGVALALAVLVYGMGKAVGKVN*
Ga0075017_1016320831	3300006059	Watersheds	LRMPAFEVSLDNPQSTKIPFGVAMSLAVVFYGVGRAMGICSL*
Ga0075019_105165311	3300006086	Watersheds	SEVSLDDPQSTKIPFGVAMALTVLFYGMGRALGNW*
Ga0075019_106872202	3300006086	Watersheds	LRNMARMLGAFFSLRIPAFEVSLDNPQATKIPFGVAMAAAVVLYGVGRVAGKL*
Ga0075014_1002137053	3300006174	Watersheds	LRNIVHLLAALFRLRMPGFEVSLDNPGSAKIPFGVAMSATAVLYGVGRAIGKL*
Ga0066797_11293431	3300006864	Soil	LLNIAHLLAALFSLRMPGSEVSLDDPQSAKIPFGVAIALTVLFYAMGKALGNL*
Ga0099829_102728313	3300009038	Vadose Zone Soil	LFSLRMPASELSLDDPQSTKIPFGVAMALTVLFYGMGRAMGNL*
Ga0099829_112534602	3300009038	Vadose Zone Soil	LFSLRMPASELSLDDPQSTKIPFGVAMALTVLFYGMGRAMGHL*
Ga0099830_101653861	3300009088	Vadose Zone Soil	AHLLAALFSLRMPASELSLDDPQSTKIPFGVAMALTVLFYGMGRAMGNL*
Ga0099830_112183742	3300009088	Vadose Zone Soil	LLAALFSLRMPASELSLDDPQSTKIPFGVAMALTVLFYGMGRAMGNL*
Ga0099828_100787471	3300009089	Vadose Zone Soil	AFFSLRMPGPEVSLDSPQSTKIPFGVAMALTVLVLGVGRAIGKY*
Ga0099828_102572281	3300009089	Vadose Zone Soil	ALFSLRMPASELSLDDPQSTKIPFGVAMALTVLFYGMGRAMGNL*
Ga0116108_12640762	3300009519	Peatland	EVSLDDPQSTKIPFGVALAVTVLFYGMGKAIWNL*
Ga0116214_12073942	3300009520	Peatlands Soil	MPAFEVSLDDPQSTKIPFGVAMALTVLFYGMGRALGKL*
Ga0116222_15136911	3300009521	Peatlands Soil	LLNIAHLLAALFSLRMPGSEVSLDDPQSTRIPFGVAMALTVLFYGMGRAMGKV*
Ga0116225_10091808	3300009524	Peatlands Soil	PEVSLDDPQATKIPFGVAMALTVLFYGIARALGNL*
Ga0116115_10035639	3300009631	Peatland	LAALFSLRMPGSEVSLDDPQSTRIPFGVAMALTVLFYGMGRAMGKL*
Ga0116102_10684351	3300009632	Peatland	RMPGSEVSLDDPQSTKIPFGVAMAITVLFYGMGRALGNL*
Ga0116124_10473073	3300009634	Peatland	TLLNIAHLLAALFSLRMPGSEVSLDDPQSTKIPFGVAMAVTVLFYGMGKAIWNL*
Ga0116117_10946281	3300009635	Peatland	ARLLVALLSLRMPASEVSRDDPQSTKIPFGVAMALTVLGYGLGKMMGKM*
Ga0116106_10445884	3300009645	Peatland	PGPEVSLDDPQATKIPFGVAMALTVLFYGLGRAMGNL*
Ga0116135_13621261	3300009665	Peatland	MPGSELSLDDPQSTKIPFGVAMALTVLAYGIGKAMGKL*
Ga0116219_103343331	3300009824	Peatlands Soil	PEVSLDDPQATKIPFGVAMALAVLFYGMGRAMGNL*
Ga0074045_100355215	3300010341	Bog Forest Soil	VNIVHLLGALFSLRMPGSAVSLDDPQSTKIPFGVAMAATVFLYGIGRIIGKL*
Ga0074045_110781362	3300010341	Bog Forest Soil	GSQVSLDDPRSTKIPFGVAMALTVLLYGIGKAMGKL*
Ga0074044_106307162	3300010343	Bog Forest Soil	SEVSLDDPQSTKIPFGVAMALTVLAYGAGRAMGKL*
Ga0136449_1021538361	3300010379	Peatlands Soil	LLAALFSLRMPGSEVSLDDPQSTKIPFGVAMALTVLFYGMGRAMGNL*
Ga0137392_105864781	3300011269	Vadose Zone Soil	MPASELSLDDPQSTKIPFGVAMALTVLFYGMGRTMGNL*
Ga0137391_102586734	3300011270	Vadose Zone Soil	LRMPASELSLDDPQSTKIPFGVAMALTVLFYGMGRAMGNL*
Ga0137372_111251811	3300012350	Vadose Zone Soil	LAALFSLRMPASEVTVDNPQSTTIPFGVAMALAVLLYALGKTTGRL*
Ga0126369_102306921	3300012971	Tropical Forest Soil	AFFHLRVPGGEVSLDSPQSTKIPFGVAMAAAVVILGAGRALGKL*
Ga0181530_104311412	3300014159	Bog	GSEVWSEVSLDNPQSTKIPFGVAMALTVLFYGVGKAMGKV*
Ga0181532_103840031	3300014164	Bog	PEVSLDDPQATKIPFGVAMALTVLFYGMGRAMGNL*
Ga0181523_105687471	3300014165	Bog	GPEVSLDDPQATKIPFGVAMALTVLFYGMGRAMGNL*
Ga0181528_100290545	3300014167	Bog	SLRMPGPEVSLDNPQSTKIPFGVAMALAVLFCGLGRALGKI*
Ga0181531_102076381	3300014169	Bog	MPGSAVSLDDPQSTKIPFGVAMALTVLIYGIGRATGKM*
Ga0181537_106491522	3300014201	Bog	LLAAAFSLRMPGPEVSLDNPQSTKIPFGVAMALAVLFCGLGRALGKI*
Ga0182017_105485052	3300014494	Fen	VNIARLLAALFSLRMPAFEVSLDDPQSAKIPFGVAMALAVLFCAMARALGKF*
Ga0182021_118418772	3300014502	Fen	RTPAPAVSLDNPQSTKIPFGVAMAVAVLVYGMGRAMGKL*
Ga0181536_100170828	3300014638	Bog	PGSEVSLDDPQSTKIPFGVAMALAVLFYGMGRALAYL*
Ga0181525_106352772	3300014654	Bog	QVTLDDPESTKIPLGVAMALTVVLYGVGTALGKM*
Ga0181511_12583262	3300016702	Peatland	LFSLRMPGSEVSLDDPQATKIPFGVAMALTVLFYGMGRAMGKL
Ga0181515_10283792	3300016730	Peatland	AHLLDALLSLRMPGPEVSLDDPQATKIPFGVAMAFAVLFYGIARALGNL
Ga0187801_104322462	3300017933	Freshwater Sediment	LAALFRLRMPGSELSLDDPQSAKIPFGVAMALTVVFYGIGRAMGKL
Ga0187803_101383231	3300017934	Freshwater Sediment	TSEVSVDNPRSTTIPFGVAMALAVLLYALGKTTGRL
Ga0187803_104831291	3300017934	Freshwater Sediment	NIARLLAALFRLRMPGSELSLDDPQSTKIPFGVAMALTVVFYGIGRAMGSL
Ga0187848_103648591	3300017935	Peatland	AALFSLRMPGSEVSLDDPQATKIPFGVAMALTVLFYGMGRAMGKL
Ga0187817_107239921	3300017955	Freshwater Sediment	NIVHLLAAFFSLRMPAFEVSLDNPQSTKIPFGVAMAATVVIYGIGRATGKL
Ga0187817_107960612	3300017955	Freshwater Sediment	LLNIAHMLAAFFSLRMPAFEVSVDNPQSTTIPFGVALALAVLLCALGKTTGKL
Ga0187888_10640092	3300018008	Peatland	LLGALLSLRMQASEVSLDDPQSTKIPLGVAMALTVLGYGLGKMMGKL
Ga0187872_102214631	3300018017	Peatland	TLLNIARLLAALFSLRMPGSEVSLDDPQATKIPFGVAMALTVLFYGVGKAMGKV
Ga0187867_105975592	3300018033	Peatland	VSLDDPQSTKIPFGVAMALAVLFCGMGRALAIGNL
Ga0187890_103121201	3300018044	Peatland	MPGHEVSLDDPQATKIPFGVAMALTVLFYGMARALGKV
Ga0187890_108848472	3300018044	Peatland	MFSLHMPGSELSLDDPQSTKIPFGVAMALTVLAYGAGKAMGKL
Ga0187769_104775753	3300018086	Tropical Peatland	LRMPGPEVSLDDPQSTKIPFGVAMALAVLFYGMGRAMGNL
Ga0187771_112364761	3300018088	Tropical Peatland	PGPELSLDNPQATKIPFGVALALAALLYALGVMAQIL
Ga0187774_102665383	3300018089	Tropical Peatland	LLRTLQNIGHLLAALLRLRMPGGEVSLDSSQSTKIPFGVAMAVTVLILAAGRAAGRL
Ga0193751_10542604	3300019888	Soil	AHLLAALFSLRMPGSEVSLDNPQSTKIPFGVAMALTVLLYGMGRAMGKI
Ga0210407_100245591	3300020579	Soil	MLMNIAHLLAALFSLRMPGSEVSLDDPQSTKIPFGVAMALTVLFYGVGRAMGNL
Ga0210407_100557634	3300020579	Soil	LRMPGFEVSLDDPQSTKIPFGVAVALTVLFYGMARAIGKI
Ga0210403_110604471	3300020580	Soil	VNIAHLLTALFSLRMPGSEVSLDDPQSTKIPFGVAVALTVLFYGMARAIGKI
Ga0210400_100555785	3300021170	Soil	ALFSLRMPGSEVSLDDPQSTKIPFGVAMALTVLLYGMGRAMRNL
Ga0210400_110035642	3300021170	Soil	LMNIARLLAALFSLRMPGSEVSLDDPKSTKIPFGVAMALTVLFYGMGRAMGNL
Ga0210388_110711411	3300021181	Soil	LLTLRRPGAQVTLDDPESTKIPLGVAMALTVVLYGVGTALGKM
Ga0210386_105407061	3300021406	Soil	GLEVSLDDPQSTKIPFGVAMALTVLFYGVGRMLGKM
Ga0210398_102860751	3300021477	Soil	SEVSLDDPQSTKIPFGVAMAVTVLLYGVGRVMGKV
Ga0209527_10270821	3300027583	Forest Soil	LRMPGSEVSLDDPKSTKIPFGVAMAAAVLFCAAGRALGRI
Ga0209736_10758203	3300027660	Forest Soil	LAALFSLRMPGYEVSLDDPQSTKIPFGAAMALTVFLYGMGRAMGKI
Ga0209910_100119113	3300027803	Thawing Permafrost	MPASEVSLDDPQSTKIPFGVAMALTVLGYGLGKMMGKM
Ga0209039_101696781	3300027825	Bog Forest Soil	FSLRMPAFEVSVDNPQSTTIPFGVAMALAVLLCALGKTTGRL
Ga0209180_101386423	3300027846	Vadose Zone Soil	SLRMPASELSLDDPQSTKIPFGVAMALTVLFYGMGRAMGNL
Ga0209283_100316811	3300027875	Vadose Zone Soil	MPASELSLDDPQSTKIPFGVAMALTVLFYGMGRAMGNL
Ga0209283_100417521	3300027875	Vadose Zone Soil	PASELSLDDPQSTKIPFGVAMALTVLFYGMGRAMGHL
Ga0209067_103003613	3300027898	Watersheds	LWNIAHLLAALVSLRMPGSEVSLDDPQSTKIPFGVAMALTVLFYGMGRALGNW
Ga0209526_104642742	3300028047	Forest Soil	FNIAHLLAALFSLRMPGSEVSLDDPQSTKIPFGVAVALTVLFYGMGRAMGKI
Ga0302144_102550821	3300028560	Bog	MPAHEVSLDDPHSTKIPFGVAMALTVLFLGVGRVLGIYNLG
Ga0302301_10553001	3300028731	Palsa	FSLRMPGSAVSLDDPQSTKIPFGVAMAVTVLVYGIGRAAGKI
Ga0302219_100783121	3300028747	Palsa	LPGQELSLDDPQSTKIPFGVAMALTVVFYGIGRAVGKL
Ga0302201_100308404	3300028785	Bog	LRMPASEVSLDDPQSTKIPFGVAMALTVLGYGLGKMMGKM
Ga0302221_101849731	3300028806	Palsa	LFSLRMPGSAVSLDDPQSTKIPFGVAMAVTVLVYGIGRAAGKI
Ga0302278_100441681	3300028866	Bog	LRMPASEVSLDDPQSTKIPFGVAMALTVLGYGLGKAMGKM
Ga0311368_102825281	3300029882	Palsa	CLRMPGAEVSLDDPQSTRIPFGVAMALTVVFYGVGRALGKL
Ga0311352_101026431	3300029944	Palsa	LLAALFSLHMPGQELSLDDPQSTKIPFGVAMALTVVFYGIGRAVGKL
Ga0302150_100812873	3300029956	Bog	IAHLLAALFSLRMPAHEVSLDDPHSTKIPFGVAMALAVLFLGVGRVLGIYNLG
Ga0302304_103423891	3300029993	Palsa	ETLLNIAHLLAALFSLRMPGSAVSLDDPQSTKIPFGVAMAVTVLVYGIGRAAGKI
Ga0302179_101275983	3300030058	Palsa	LAALFSLHMPGQELSLDDPQSTKIPFGVAMALTVVFYGVGIALGKL
Ga0311372_117522191	3300030520	Palsa	AALLCLRMPGAEVSLDDPQSTRIPFGVAMALTVVFYGVGRALGKL
Ga0316363_101195531	3300030659	Peatlands Soil	NMAHLLAALFNWRMPGPEVSLDDPQATKIPFGVAMALAVLFYWIARALGNL
Ga0170824_1272191331	3300031231	Forest Soil	IAHLLAALFSLRMPASELSLDDPQSTKIPFGVAMALTVLFYVMGRAMGRI
Ga0307479_103554293	3300031962	Hardwood Forest Soil	ASLFSLRMPGSEVSLDDPQSTKIPFGVAMALTVLLYGMGRATGRI
Ga0307479_108388523	3300031962	Hardwood Forest Soil	VNIAHLLASLFSLRMPGSEVSLDDPQSTKIPFGVAMALTVLLYGMGRAMGNL
Ga0307471_1006234411	3300032180	Hardwood Forest Soil	RMPASELSLDDPQSTKIPFGVAMALTVLFYGMGRAMGNL
Ga0335082_112444781	3300032782	Soil	MPGAEVSLDNPESTKIPFGVAVALAVVLYGIAAAMGKV
Ga0335077_104052761	3300033158	Soil	IAHMLAAIFSLRLPGAEVSLDNPQSTKIPFGVALALAVLLYAIGTLAGKIQA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F092541

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences