Metagenome Family F092540

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F092540
Family Type	Metagenome
Number of Sequences	107
Average Sequence Length	75 residues
Representative Sequence	MSTASTTIISNLKSAAAPTGNTLKAAGTAGIDVNGMLALAQSKALELKTCLTLLVRATDGADPNLATINNILASLV
Number of Associated Samples	67
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	83.18 %
% of genes near scaffold ends (potentially truncated)	19.63 %
% of genes from short scaffolds (< 2000 bps)	60.75 %
Associated GOLD sequencing projects	62
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.62

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (79.439 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland (26.168 % of family members)
Environment Ontology (ENVO)	Unclassified (41.121 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (59.813 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 52.88% β-sheet: 0.00% Coil/Unstructured: 47.12%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.62
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.62
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF00198	2-oxoacid_dh	16.82
PF02817	E3_binding	12.15
PF13442	Cytochrome_CBB3	2.80
PF00782	DSPc	2.80
PF00676	E1_dh	1.87
PF04860	Phage_portal	1.87
PF04362	Iron_traffic	0.93
PF13307	Helicase_C_2	0.93
PF03551	PadR	0.93
PF14492	EFG_III	0.93
PF14693	Ribosomal_TL5_C	0.93
PF02780	Transketolase_C	0.93
PF13328	HD_4	0.93
PF12704	MacB_PCD	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG0508	Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component	Energy production and conversion [C]	28.97
COG0567	2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes	Energy production and conversion [C]	1.87
COG1071	TPP-dependent pyruvate or acetoin dehydrogenase subunit alpha	Energy production and conversion [C]	1.87
COG2924	Fe-S cluster biosynthesis and repair protein YggX	Posttranslational modification, protein turnover, chaperones [O]	1.87
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	0.93
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.93
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	80.37 %
Unclassified	root	N/A	19.63 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	79.44 %
Unclassified	root	N/A	19.63 %
Viruses	superkingdom	All Organisms → Viruses	0.93 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	79.44 %
Unclassified	root	N/A	19.63 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	69.16 %
Unclassified	root	N/A	19.63 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	27.10 %
Unclassified	root	N/A	19.63 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	3.74 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	27.10 %
Unclassified	root	N/A	19.63 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.74 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	27.10 %
Unclassified	root	N/A	19.63 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.74 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.63 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	4.67 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.74 %
Terriglobus	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus	0.93 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	0.93 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	0.93 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.63 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	4.67 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.74 %
Granulicella paludicola	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella paludicola	0.93 %
Acidobacteriaceae bacterium KBS 83	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	0.93 %
Terriglobus	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus	0.93 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.93 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000567\|JGI12270J11330_10004160	All Organisms → cellular organisms → Bacteria → Acidobacteria	10287	Open in IMG/M
3300001082\|JGI12664J13189_1001124	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3442	Open in IMG/M
3300001471\|JGI12712J15308_10003869	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	4319	Open in IMG/M
3300001471\|JGI12712J15308_10088691	Not Available	784	Open in IMG/M
3300003368\|JGI26340J50214_10024165	All Organisms → cellular organisms → Bacteria	1852	Open in IMG/M
3300004080\|Ga0062385_10087925	All Organisms → cellular organisms → Bacteria	1469	Open in IMG/M
3300004082\|Ga0062384_100936909	Not Available	615	Open in IMG/M
3300004152\|Ga0062386_100184244	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1638	Open in IMG/M
3300005541\|Ga0070733_10177997	All Organisms → cellular organisms → Bacteria → Acidobacteria	1387	Open in IMG/M
3300005541\|Ga0070733_10788217	Not Available	638	Open in IMG/M
3300006052\|Ga0075029_100003561	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8726	Open in IMG/M
3300006052\|Ga0075029_100065784	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus	2123	Open in IMG/M
3300006059\|Ga0075017_100075600	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2308	Open in IMG/M
3300006059\|Ga0075017_101292101	All Organisms → cellular organisms → Bacteria → Acidobacteria	572	Open in IMG/M
3300006174\|Ga0075014_100242243	All Organisms → cellular organisms → Bacteria → Acidobacteria	927	Open in IMG/M
3300006176\|Ga0070765_100019739	All Organisms → cellular organisms → Bacteria	5006	Open in IMG/M
3300009635\|Ga0116117_1049495	All Organisms → cellular organisms → Bacteria → Acidobacteria	1034	Open in IMG/M
3300009639\|Ga0116122_1275100	Not Available	519	Open in IMG/M
3300009640\|Ga0116126_1083144	All Organisms → cellular organisms → Bacteria → Acidobacteria	1169	Open in IMG/M
3300009698\|Ga0116216_10005075	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	8446	Open in IMG/M
3300009700\|Ga0116217_10040043	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3483	Open in IMG/M
3300010341\|Ga0074045_10050691	All Organisms → cellular organisms → Bacteria → Acidobacteria	3008	Open in IMG/M
3300010343\|Ga0074044_10791338	All Organisms → cellular organisms → Bacteria → Acidobacteria	619	Open in IMG/M
3300014151\|Ga0181539_1261404	All Organisms → cellular organisms → Bacteria → Acidobacteria	645	Open in IMG/M
3300014158\|Ga0181521_10167972	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1238	Open in IMG/M
3300014200\|Ga0181526_10679386	All Organisms → cellular organisms → Bacteria → Acidobacteria	650	Open in IMG/M
3300017925\|Ga0187856_1011461	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	5046	Open in IMG/M
3300017955\|Ga0187817_10100592	All Organisms → cellular organisms → Bacteria → Acidobacteria	1819	Open in IMG/M
3300017959\|Ga0187779_10124484	All Organisms → cellular organisms → Bacteria	1572	Open in IMG/M
3300017959\|Ga0187779_10898114	Not Available	610	Open in IMG/M
3300017961\|Ga0187778_10043014	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2761	Open in IMG/M
3300017961\|Ga0187778_10093301	All Organisms → cellular organisms → Bacteria → Acidobacteria	1865	Open in IMG/M
3300017961\|Ga0187778_10371054	All Organisms → cellular organisms → Bacteria → Acidobacteria	935	Open in IMG/M
3300017961\|Ga0187778_11242264	Not Available	523	Open in IMG/M
3300017972\|Ga0187781_10000010	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	158768	Open in IMG/M
3300017972\|Ga0187781_10023671	All Organisms → cellular organisms → Bacteria	4260	Open in IMG/M
3300017972\|Ga0187781_10087962	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella paludicola	2149	Open in IMG/M
3300017973\|Ga0187780_10481217	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	885	Open in IMG/M
3300017973\|Ga0187780_10497577	Not Available	870	Open in IMG/M
3300017975\|Ga0187782_10011371	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	6520	Open in IMG/M
3300017975\|Ga0187782_10690775	Not Available	786	Open in IMG/M
3300018007\|Ga0187805_10165162	All Organisms → cellular organisms → Bacteria → Acidobacteria	1008	Open in IMG/M
3300018007\|Ga0187805_10278956	Not Available	767	Open in IMG/M
3300018034\|Ga0187863_10597279	Not Available	621	Open in IMG/M
3300018062\|Ga0187784_11522951	Not Available	530	Open in IMG/M
3300018085\|Ga0187772_10022807	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3630	Open in IMG/M
3300018085\|Ga0187772_10203397	All Organisms → cellular organisms → Bacteria → Acidobacteria	1331	Open in IMG/M
3300018085\|Ga0187772_10256695	All Organisms → cellular organisms → Bacteria → Acidobacteria	1189	Open in IMG/M
3300018085\|Ga0187772_10298785	All Organisms → cellular organisms → Bacteria → Acidobacteria	1103	Open in IMG/M
3300018085\|Ga0187772_10304194	All Organisms → cellular organisms → Bacteria → Acidobacteria	1093	Open in IMG/M
3300018085\|Ga0187772_10574118	All Organisms → cellular organisms → Bacteria → Acidobacteria	801	Open in IMG/M
3300018085\|Ga0187772_10581464	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	795	Open in IMG/M
3300018086\|Ga0187769_10003044	All Organisms → cellular organisms → Bacteria → Acidobacteria	9958	Open in IMG/M
3300018086\|Ga0187769_10143952	All Organisms → cellular organisms → Bacteria → Acidobacteria	1742	Open in IMG/M
3300018086\|Ga0187769_10250736	All Organisms → cellular organisms → Bacteria → Acidobacteria	1317	Open in IMG/M
3300018088\|Ga0187771_10005051	All Organisms → cellular organisms → Bacteria → Acidobacteria	9335	Open in IMG/M
3300018088\|Ga0187771_10074151	All Organisms → cellular organisms → Bacteria → Acidobacteria	2696	Open in IMG/M
3300018088\|Ga0187771_10809541	Not Available	795	Open in IMG/M
3300018090\|Ga0187770_10671945	All Organisms → cellular organisms → Bacteria → Acidobacteria	826	Open in IMG/M
3300021088\|Ga0210404_10121545	All Organisms → cellular organisms → Bacteria	1342	Open in IMG/M
3300021170\|Ga0210400_10490568	Not Available	1014	Open in IMG/M
3300021180\|Ga0210396_10085214	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2866	Open in IMG/M
3300021401\|Ga0210393_10085202	All Organisms → cellular organisms → Bacteria	2506	Open in IMG/M
3300021432\|Ga0210384_10140256	All Organisms → cellular organisms → Bacteria → Acidobacteria	2169	Open in IMG/M
3300021474\|Ga0210390_10312076	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1332	Open in IMG/M
3300027370\|Ga0209010_1002194	All Organisms → cellular organisms → Bacteria → Acidobacteria	4633	Open in IMG/M
3300027497\|Ga0208199_1092672	All Organisms → cellular organisms → Bacteria → Acidobacteria	627	Open in IMG/M
3300027568\|Ga0208042_1007234	All Organisms → cellular organisms → Bacteria	3040	Open in IMG/M
3300027795\|Ga0209139_10366341	Not Available	503	Open in IMG/M
3300027812\|Ga0209656_10009916	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6020	Open in IMG/M
3300027842\|Ga0209580_10091827	All Organisms → cellular organisms → Bacteria → Acidobacteria	1461	Open in IMG/M
3300027867\|Ga0209167_10533368	Not Available	643	Open in IMG/M
3300027895\|Ga0209624_10181321	All Organisms → cellular organisms → Bacteria → Acidobacteria	1397	Open in IMG/M
3300027895\|Ga0209624_10534682	Not Available	780	Open in IMG/M
3300027895\|Ga0209624_10587798	All Organisms → cellular organisms → Bacteria → Acidobacteria	739	Open in IMG/M
3300027898\|Ga0209067_10016748	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3793	Open in IMG/M
3300027908\|Ga0209006_10000259	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	54683	Open in IMG/M
3300027908\|Ga0209006_10008963	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	9038	Open in IMG/M
3300027908\|Ga0209006_10012620	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7658	Open in IMG/M
3300027911\|Ga0209698_10206866	All Organisms → Viruses → Predicted Viral	1584	Open in IMG/M
3300028806\|Ga0302221_10364358	All Organisms → cellular organisms → Bacteria → Acidobacteria	630	Open in IMG/M
3300028906\|Ga0308309_10332613	Not Available	1291	Open in IMG/M
3300029951\|Ga0311371_10829066	All Organisms → cellular organisms → Bacteria → Acidobacteria	1133	Open in IMG/M
3300030057\|Ga0302176_10297129	All Organisms → cellular organisms → Bacteria → Acidobacteria	648	Open in IMG/M
3300030503\|Ga0311370_10340217	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1918	Open in IMG/M
3300032783\|Ga0335079_10272786	All Organisms → cellular organisms → Bacteria	1854	Open in IMG/M
3300032805\|Ga0335078_10000028	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	278537	Open in IMG/M
3300032805\|Ga0335078_10000633	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	54178	Open in IMG/M
3300032829\|Ga0335070_10013502	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	9525	Open in IMG/M
3300032892\|Ga0335081_11349493	Not Available	801	Open in IMG/M
3300032892\|Ga0335081_12523797	Not Available	530	Open in IMG/M
3300032892\|Ga0335081_12609043	Not Available	518	Open in IMG/M
3300032895\|Ga0335074_10009783	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	13395	Open in IMG/M
3300032895\|Ga0335074_10019496	All Organisms → cellular organisms → Bacteria → Acidobacteria	9570	Open in IMG/M
3300032895\|Ga0335074_10170335	All Organisms → cellular organisms → Bacteria	2715	Open in IMG/M
3300032895\|Ga0335074_10439673	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1389	Open in IMG/M
3300032895\|Ga0335074_10692169	All Organisms → cellular organisms → Bacteria → Acidobacteria	985	Open in IMG/M
3300032896\|Ga0335075_10663588	All Organisms → cellular organisms → Bacteria → Acidobacteria	1013	Open in IMG/M
3300032898\|Ga0335072_10128095	All Organisms → cellular organisms → Bacteria → Acidobacteria	3170	Open in IMG/M
3300032898\|Ga0335072_10152706	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2828	Open in IMG/M
3300032898\|Ga0335072_10751490	Not Available	943	Open in IMG/M
3300033134\|Ga0335073_10149247	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2962	Open in IMG/M
3300033134\|Ga0335073_10193871	All Organisms → cellular organisms → Bacteria	2529	Open in IMG/M
3300033134\|Ga0335073_10871548	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	953	Open in IMG/M
3300033977\|Ga0314861_0003662	All Organisms → cellular organisms → Bacteria → Acidobacteria	14368	Open in IMG/M
3300033977\|Ga0314861_0010712	All Organisms → cellular organisms → Bacteria → Acidobacteria	6552	Open in IMG/M
3300033977\|Ga0314861_0153616	All Organisms → cellular organisms → Bacteria → Acidobacteria	1122	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	77.57%
Aquatic	Environmental → Aquatic	22.43%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	73.83%
Freshwater	Environmental → Aquatic → Freshwater	15.89%
Sediment	Environmental → Aquatic → Sediment	6.54%
Peat	Environmental → Terrestrial → Peat	3.74%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Terrestrial → Soil → Wetlands	48.60%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	15.89%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	14.02%
Loam	Environmental → Terrestrial → Soil → Loam	11.21%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	6.54%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	3.74%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	48.60%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.21%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	10.28%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	8.41%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	6.54%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.61%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	3.74%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.80%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.80%

Habitat	Taxonomy	Distribution
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	26.17%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	17.76%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	9.35%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	6.54%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	5.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.61%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	4.67%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	3.74%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	3.74%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	2.80%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	2.80%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.80%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	2.80%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.87%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	1.87%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.87%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300001082	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O3	Environmental	Open in IMG/M
3300001471	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2	Environmental	Open in IMG/M
3300003368	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300009635	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_10	Environmental	Open in IMG/M
3300009639	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_40	Environmental	Open in IMG/M
3300009640	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_40	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300014151	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_60_metaG	Environmental	Open in IMG/M
3300014158	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300017925	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_40	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300027370	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O3 (SPAdes)	Environmental	Open in IMG/M
3300027497	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG (SPAdes)	Environmental	Open in IMG/M
3300027568	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG (SPAdes)	Environmental	Open in IMG/M
3300027795	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028806	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_1	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030057	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_1	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033977	Tropical peat soil microbial communities from peatlands in Loreto, Peru - SJ75	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12270J11330_100041606	3300000567	Peatlands Soil	MSTTASTTIISNLKGAASPTANTVKAANTAAIDFGGMLGVAQSKALELKTCLTLLVRATDGADPNLATINNILASLV*
JGI12664J13189_10011244	3300001082	Forest Soil	MSTASTTIISNLKNATAPTSNTAKAASAAGMDVTGMMSLAQTKALELKSHLTLLVHVTDAADGNLATLNNILASLT*
JGI12712J15308_100038695	3300001471	Forest Soil	MSTTASTTIVSNLKNATVPTGNTAKAASAVGLDMAGMLALAQTKALELKGHLTLLAHVTDTADPNLATLNNILASLT*
JGI12712J15308_100886912	3300001471	Forest Soil	VSTPSTTIIANLKNVALPTGNTFKAANAAGIDMAGMLAVAQTKALELKACLALLVKATDGADGNLATLNNILASLV*
JGI26340J50214_100241652	3300003368	Bog Forest Soil	MSTPSTTIISNLKSAAAPTSNTSKAANTAGIDMNGMLALAASKALELKACLALIAHATDGADPNLTTLNNILASLV*
Ga0062385_100879252	3300004080	Bog Forest Soil	MSTPSTTIVANLKNAALPTGNTLKAASAAGLDMAGMLELAQIKALELKACLTLIVHATDGADGNLTTLNNVLASLV*
Ga0062384_1009369091	3300004082	Bog Forest Soil	MSTPSTTIVANLKNAALPTGNTLKAASAAGLDMAGMLELAQIKALELKACLTLIVHATDGADGNLATLNNVLASLV*
Ga0062386_1001842442	3300004152	Bog Forest Soil	MSTASTTIISNLKGATLPTANTLKAANAAGIDVNGMLMLAESKALELKVCLTLLARASDGADPNLATINNILASLV*
Ga0070733_101779973	3300005541	Surface Soil	MSTASTTIVSDLKNAASPTGNTIKAANTAGIDVGGMLALARSKALELKTCLTLLERATDGADPNLSTLNNILASLT*
Ga0070733_107882172	3300005541	Surface Soil	TTASTTIITNLKSVSAPTANTLKAGGGGGMDIAGMLALAQTKALELKSCLTLMARLIDAADPNLTTINDVLASLS*
Ga0075029_1000035614	3300006052	Watersheds	MSTASTTIISNLKSTAVPTGNTSKAANAAGIDMNGMLALAASKALELKACLALIAHATDGADPNLVTLNNILASLV*
Ga0075029_1000657843	3300006052	Watersheds	MSTASTTIVSNLKNATAPTTNTLKAASAAGLDTNGMLALAQAKALELKTCLTLLARVTDAGDGNLATLNNVLASLV*
Ga0075017_1000756003	3300006059	Watersheds	MSTASTTIISNLKSASAPTSNTSKAANGAGIDMNGMLALAASKALELKACLALIAHATDGADPNLATVNNILASLV*
Ga0075017_1012921011	3300006059	Watersheds	MSTASTTIVSNLKNATAPTTNTLKTASAAGLDINGMLGLAQAKALELKTCLTLLARVTDAGDGNLATLNNVLASLV*
Ga0075014_1002422431	3300006174	Watersheds	MSTASTTIISNLKSASAPTSNTSKAANGAGIDMNGMLALAASKALELKACLALIAHATDGADPN
Ga0070765_1000197394	3300006176	Soil	MSTPSTTIIANLKNAALPTGNTLKAASAAGLDMAGMLELAQVKALELKACLTLIVHATDGADGNLTTLNNILASLV*
Ga0116117_10494953	3300009635	Peatland	MSTTASTTIISNLKNATAPTGNTAKAASAAGMDMVGMIALAQTKALELKAHLTLLVRVTDAADPNLATLNNILASLT*
Ga0116122_12751001	3300009639	Peatland	LKGAAAPTSNTLKAAGAAGLDMSGMLALAQSKALELKACLTLLARATDAADPNLATINNILASLV*
Ga0116126_10831442	3300009640	Peatland	VSTPSTSIISNLKGAAAPTSNTLKAAGAAGLDMSGMLALAQSKALELKACLTLLARATDAADPNLATINNILASLV*
Ga0116216_100050758	3300009698	Peatlands Soil	MSTTASTTIISNLKGAASPTANTVKAANTAAIDFGGMLGLAQSKALELKTCLTLLVRATDGADPNLATINNILASLV*
Ga0116217_100400431	3300009700	Peatlands Soil	NLKGAASPTANTVKAANTAAIDFGGMLGVAQSKALELKTCLTLLVRATDGADPNLATINNILASLV*
Ga0074045_100506913	3300010341	Bog Forest Soil	LKALTLPTGNTFKAANAGGIDMAGMLSLAQSKALELKACLTLLVRATDAADGNLATLDNILASLT*
Ga0074044_107913381	3300010343	Bog Forest Soil	SKRNYNFQNDRRPNMTTPSTTIISNLKSASAPTANTLKAANSGGLDMGGMLALAQSKALELKACLTLLTKATDGADPNLATLNNILASLV*
Ga0181539_12614041	3300014151	Bog	KVSTPSTSIISNLKGAAAPTSNTLKAAGAAGLDMSGMLALAQSKALELKACLTLLARATDAADPNLATINNILASLV*
Ga0181521_101679723	3300014158	Bog	VEFDEERRRKVSTPSTSIISNLKGAAAPTSNTLKAAGAAGLDMSGMLALAQSKALELKACLTLLARATDAADPNLATINNILASLV*
Ga0181526_106793862	3300014200	Bog	MSTTASTTIVSNLKSATAPTANTLKAANAAGLDMNGMLALAQVKALELKACVTLVARVTDASDANLATLNNILASLV*
Ga0187856_10114615	3300017925	Peatland	VSTPSTSIISNLKGAAAPTSNTLKAAGAAGLDMSGMLALAQSKALELKACLTLLARATDAADPNLATINNILASLV
Ga0187817_101005923	3300017955	Freshwater Sediment	MSTPSTTIISNLKSAGAPTGNTVKAANVAAVDVSGMMALAQSKALELKACLTLLTAHTDAADSNLATLNNILASLV
Ga0187779_101244843	3300017959	Tropical Peatland	MSTTASTTIISNLKGAAAPTANTVKAANAAGIDIGGMLALAQSKALELKTCLALLMRATDGADPNLATINNILASLV
Ga0187779_108981142	3300017959	Tropical Peatland	MSTTASTTIISNLKGAGAPTANTVKAANAAGIDFGGMLALAQSKALELKTCLALLVRATDGADPNLATINNILASLV
Ga0187778_100430144	3300017961	Tropical Peatland	MSTTASTTIISNLKGAGAPTANTVKAANAAGIDIGGMLALAQSKALELKTCLALLVRATDGADPNLATINNILA
Ga0187778_100933012	3300017961	Tropical Peatland	MSTASTTIVSNLKSASAPTSNTLKAASAAGIDASGMLALAQSKALELKTCLTLLARATDGADPNLATINNILASLV
Ga0187778_103710542	3300017961	Tropical Peatland	VSTPSTTIISNLKNVAAPTANTLKASTGAGLDVSGMLSLAQTKALELKLCLTLLARSTDAADPNLTTLNNILASLT
Ga0187778_112422642	3300017961	Tropical Peatland	STTIISNLKSATAPTSNTVKAANTAGIDAGGMLALAQSKALELKTCLTLLAAHTDSGDTNLTTLNNILASLV
Ga0187781_100000104	3300017972	Tropical Peatland	MSTASTTIISNLKSATAPTGNTLKAAGTAGIDVCGMLALAQSKALELKVCLTLVARATDGADPNLTTINNILASLV
Ga0187781_100236715	3300017972	Tropical Peatland	VSTPSTTIISNLKSATAPTSNTLKAAGAAGLDVCGMLALAQSKALELKTCLTLLARATDAADPNLGTIDNILASLV
Ga0187781_100879623	3300017972	Tropical Peatland	MSTTASTTIISNLKNATAPTANTLKAANAAGIDMSGMLALAQSKALELKVCLTLLARVTDGADPNLATINDILASLV
Ga0187780_104812172	3300017973	Tropical Peatland	MSTASTTIISNLKNAAAPTSNTLKAASTAGLDVCGMLALAQSKALELKTCLTLLARATDPADPNLATINNILASLV
Ga0187780_104975772	3300017973	Tropical Peatland	MSTTASTTIISNLKGAAAPTANTVKAANAAGIDIGGMLALAQSKALELKTCLALLVRATDGADPNLATINNILASLV
Ga0187782_100113713	3300017975	Tropical Peatland	VSTPSTTIISNLKSATAPTSNTLKAAGAAGLDVCGMLALAQSKALELKTCLTLLARATDAADPNLATIDNILASLV
Ga0187782_106907752	3300017975	Tropical Peatland	MSTASTTIISNLKSASAPTSNTLKAAGALGLDVCGMLAEAQTKALELKTCLTLLARATDAADPNLATINNILASLV
Ga0187805_101651622	3300018007	Freshwater Sediment	VSTASTTIISNLRTASAPTANTIKAGGTAGIDVQGTLALAQSKALELKTCLTLLVRATDGADPNLATLNNILASLV
Ga0187805_102789562	3300018007	Freshwater Sediment	MSTASTTIISNLKGAAPPTGNTSKAANTAGIDMNGMLALATSKALELKACLALIAHATDAADPNLATVNNILASLV
Ga0187863_105972792	3300018034	Peatland	MSTTASTTIISNLKNATAPTGNTAKAASAAGMDMVGMIALAQTKALELKAHLTLLVRVTDAADPNLATLNNILASLT
Ga0187784_115229512	3300018062	Tropical Peatland	MSTTASTTIVSNLKNLTAPTANTLKAASAIGVDMDGMLALAQAKVLELKTCLTLIVRGTDAADPNLTTINNVLASLV
Ga0187772_100228075	3300018085	Tropical Peatland	MSSTPSTTIITNLKSATLPTANTLKAANAAGIDANGMLALAQIKALELKTCLTLLARATDGADGNLTMINNVLASLT
Ga0187772_102033972	3300018085	Tropical Peatland	MSTASTTIISNLKSATAPTGNTLKAAGTAGIDACGMLALAQSKALELKQCLTLLARATDAADPNLATINNILASLV
Ga0187772_102566953	3300018085	Tropical Peatland	VSTASTSIISNLKGATAPTANTIKAANAAGIDIGGMLALAQIKALELKTCLSLMVRAIDEADPNLTTLDNILASLS
Ga0187772_102987853	3300018085	Tropical Peatland	VSTPSTTIISNLKNVAAPTANTLKASTGAGLDVSGMLSLAQTKALELKLCLTLLARSTDAADPNLTTL
Ga0187772_103041942	3300018085	Tropical Peatland	VSTASTTIISNLKNAAAPTSNTLKAAGTAGLDVCGMLTLAQSKALELKTCLTLLARATDAADPNLATINNILASLV
Ga0187772_105741182	3300018085	Tropical Peatland	MSTTASTTIISNLKNATAPTANTLKAANAAGIDVNGMLALAQSKALELKSCLTLLARATDGADPNLVTINDILASLV
Ga0187772_105814641	3300018085	Tropical Peatland	VSTASTTIISNLKSATAPTSNTLKAAGTAGLDVSGMLALAQSKALELKTCLTLLARATDAADPNLATINNVLAS
Ga0187769_100030445	3300018086	Tropical Peatland	MNVSTPSTTIISNLKNVAAPTANTLKASTGAGLDVSGMLSLAQTKALELKLCLTLLARSTDAADPNLTTLNNILASLT
Ga0187769_101439523	3300018086	Tropical Peatland	MSTASTTIISNLKSATAPTGNTLKAAGTAGLDVCGMLALAQGKALELKACLTLLARATDGADPNLATINNILASLV
Ga0187769_102507361	3300018086	Tropical Peatland	MSTASTTIISNLKNAAAPTSNTLKAASTAGLDVCGMLALAQSKALELKTCLTLLARATDAADPNLSTINNILPSLV
Ga0187771_100050516	3300018088	Tropical Peatland	MSTASTTIISNLKSAAAPTGNTLKAAGTAGIDVNGMLALAQSKALELKTCLTLLVRATDGADPNLATINNILASLV
Ga0187771_100741514	3300018088	Tropical Peatland	VSTASTTIISNLKSAAAPTANTLKAANTAGLDMGGMLALAQSKALELKACLTLLARATDGADPNLATVNNILASLV
Ga0187771_108095412	3300018088	Tropical Peatland	MSTASTTIISNLRSAAAPTGNTLKAASTAGLDVCGMLALAQSKALELKTCLTLLARATDGADPNLATISNILASLV
Ga0187770_106719451	3300018090	Tropical Peatland	VSTASTTIISNLKNAATPTSNTLKAAGTAGLDVCGMLALAQSKALELKTCLTLLARATDAADPNLATINNILASLV
Ga0210404_101215451	3300021088	Soil	MSTTASTTIITNLKSVSAPTANTLKAGGGGGMDIAGMLALAQTKALELKSCLTLMARLIDAADPNLTTINDVLASLS
Ga0210400_104905681	3300021170	Soil	MSTPSTTIIANLKNAALPTSNTLKAASAAGLDMAGMLELAQIKALELKACLTLIVHATDGADGNLATLNNILASLV
Ga0210396_100852143	3300021180	Soil	MSTTASTTIVSNLKNATAPTSNTAKAASAAGLDMAGMMALAQTKALELKAHLTLVARVTDGADPNLATFNNILASLT
Ga0210393_100852024	3300021401	Soil	VSTPSTTIIANLKNLTSPTGNTVKAANTAGIDMAGMILLAQTKALELKVCLTLLAHATDSADGNLTMMNNILASLV
Ga0210384_101402563	3300021432	Soil	MSTPSTTIVSNLKNATLPSANTVKAANAAGVDAAGMLALAQSKALELKTCLSLLARATDGGDPNLATLNNVLASLV
Ga0210390_103120763	3300021474	Soil	MSTPSTSIISNLKSATTPTSNTIKAANAAGIDMNGMLSLAQSKALELKTCLSLIVRAVDSADPNLTTLNNILASLS
Ga0209010_10021943	3300027370	Forest Soil	MSTASTTIISNLKNATAPTSNTAKAASAAGMDVTGMMSLAQTKALELKSHLTLLVHVTDAADGNLATLNNILASLT
Ga0208199_10926722	3300027497	Peatlands Soil	MSTTASTTIISNLKGAASPTANTVKAANTAAIDFGGMLGLAQSKALELKTCLTLLVRATDGADPNLATINNILASLV
Ga0208042_10072342	3300027568	Peatlands Soil	MSTTASTTIISNLKGAASPTANTVKAANTAAIDFGGMLGVAQSKALELKTCLTLLVRATDGADPNLATINNILASLV
Ga0209139_103663412	3300027795	Bog Forest Soil	TPSTTIVANLKNAALPTGNTLKAASAAGLDMAGMLELAQIKALELKACLTLIVHATDGADGNLTTLNNVLASLV
Ga0209656_100099163	3300027812	Bog Forest Soil	MSTPSTTIISNLKSAAAPTSNTSKAANTAGIDMNGMLALAASKALELKACLALIAHATDGADPNLTTLNNILASLV
Ga0209580_100918273	3300027842	Surface Soil	MSTASTTIVSNLKNATTPSANTVKAANAAGVDAAGMLALAQSKALELKTCLSLLARATDGADPNLATLNNI
Ga0209167_105333682	3300027867	Surface Soil	MSTASTTIVSDLKNAASPTGNTIKAANTAGIDVGGMLALARSKALELKTCLTLLERATDGADPNLSTLNNILASLT
Ga0209624_101813212	3300027895	Forest Soil	MSTTASTTIVSNLKNATAPTGNTAKAASAAGLDMAGMMALAQTKALELKTHLTLVARVTDGADPNLATLNNILASLT
Ga0209624_105346822	3300027895	Forest Soil	MSTASTTIISNLKNATAPTSNTAKAASAAGMDVTGMMSLAQTKALELKNHLTLLVHVTDAADGNLATLNNILASLT
Ga0209624_105877981	3300027895	Forest Soil	IANLKNAALPTSNTLKAASAAGLDMAGMLELAQIKALELKACLTLIVHATDGADGNLATLNNILASLV
Ga0209067_100167484	3300027898	Watersheds	MSTASTTIISNLKSTAVPTGNTSKAANAAGIDMNGMLALAASKALELKACLALIAHATDGADPNLVTLNNILASLV
Ga0209006_1000025937	3300027908	Forest Soil	MSTTASTTIVSNLKNATVPTGNTAKAASAVGLDMAGMLALAQTKALELKGHLTLLAHVTDTADPNLATLNNILASLT
Ga0209006_1000896310	3300027908	Forest Soil	VSTPSTTIIANLKNLTSPTGNTVKAANTAGIDMTGMILLAQTKALELKACLALLTHSTDGSDGNLATLNNILASLV
Ga0209006_100126203	3300027908	Forest Soil	VSTPSTTIIANLKNVALPTGNTFKAANAAGIDMAGMLAVAQTKALELKACLALLVKATDGADGNLATLNNILASLV
Ga0209698_102068664	3300027911	Watersheds	MSTASTTIVSNLKNATAPTTNTLKAASAAGLDTNGMLALAQAKALELKTCLTLLARVTDAGDGNLATLNNVLASLV
Ga0302221_103643582	3300028806	Palsa	STTASTTIISNLKNATAPTGNTAKAASAAGMDMVGMIALAQTKALELKAHLTLLVRVTDTADPNLATLNNILASLT
Ga0308309_103326132	3300028906	Soil	MSTPSTTIIANLKNAALPTGNTLKAASAAGLDMAGMLELAQVKALELKACLTLIVHATDGADGNLTTLNNILASLV
Ga0311371_108290663	3300029951	Palsa	MSTTASTTIISNLKNATAPTGNTAKAASAAGMDMVGMIALAQTKALELKAHLTLLVRVTDTADPNLATLNNILASLT
Ga0302176_102971291	3300030057	Palsa	NNMSTTASTTIISNLKNATAPTGNTAKAASAAGMDMVGMIALAQTKALELKAHLTLLVRVTDTADPNLATLNNILASLT
Ga0311370_103402173	3300030503	Palsa	TASTTIISNLKNATAPTGNTAKAASAAGMDMVGMIALAQTKALELKAHLTLLVRVTDTADPNLATLNNILASLT
Ga0335079_102727863	3300032783	Soil	MSASTTIVSNLKNATAPTGNTIKAANAAAMDVSGMMALAQSKALELKACLTLIARATDGADPNLATINNILASLV
Ga0335078_10000028226	3300032805	Soil	MSATPSTTIVTNLKNAATPTANTLKAANAAGIDANGMLALAQSKALELKTCLTLLARATDGADGNLTTINNILASLS
Ga0335078_1000063318	3300032805	Soil	MSTASTTIISNLKNATLPTANTMKAANAAGIDAAGMLWLAQCKALELKTCLTMLVRATDGADPNLATLNNILASLV
Ga0335070_100135024	3300032829	Soil	MSASTTIVSNLKNATMPTGNTIKAGNTAGIDVSGMMALAQSKALELKACLTLLVRSTDGADPNLATINNILASLV
Ga0335081_113494932	3300032892	Soil	MSTPSTTIITNLKSAGAPTGNTVKAANTAGIDAGGMLALAQSKALELKACLTLLAAHTDAADANLTTVNNILASLV
Ga0335081_125237972	3300032892	Soil	STTIVSNLKNATMPTGNTIKAGNTAGIDVSGMMALAQSKALELKACLTLLVRSTDGADPNLATINNILASLV
Ga0335081_126090432	3300032892	Soil	MSASTTIVSNLKNATSPTGNTIKAANTAGIDVSGMMALAQSKALELKACLTLLARSTDGADPNLATINNILASLV
Ga0335074_1000978313	3300032895	Soil	MSTTASTTIITNLKSAAAPTGNTLKAANAAGIDMAGMLALAQIKALELKICLSLIAKLTDAADPNLTTLNNVLASLV
Ga0335074_1001949615	3300032895	Soil	VSTPSTTIISNLKSASAPTANTLKAGGGAGIDIQGMLALAQSKALELKTCLTLLVRATDGADPNLATLNNILASLV
Ga0335074_101703353	3300032895	Soil	VSTPSTTIISNLKNASTPTANTLKAADIAGIDFPGMMALAQAKALELKVCLTLLARATDGADPNLTTLNNILASLV
Ga0335074_104396734	3300032895	Soil	MSTASTTIISNLKGATPPTANTLKAASTAGIDIQGMLALAQIKALELKVCLTLVVRATDGADPNLTTINNILASLT
Ga0335074_106921692	3300032895	Soil	VSTASTTIVSNLKNASAPTANTLKAGSAAGLDVQGMLTLAQSKALELKTCLTLLVRATDGADPNLATLNNILASLV
Ga0335075_106635882	3300032896	Soil	VSTTASTTVITNLKNLAASTSNTLKAGGAAGMDVSGMLALAQSKALELKSCLTLLVRVIDSADPNLTTLNNILASLT
Ga0335072_101280953	3300032898	Soil	MSTPSTTIISNLKSATAPTGNTVKAANGAGIDAGGMLALAQTKALELKSCLTLLAAHTDSGDTNLTTINNILASLT
Ga0335072_101527064	3300032898	Soil	VSTASTTIISNLKSAATPTANTMKAASAAGLDMQGMLALAQGKALELKACLTLLVKATDGADPNLTTLNNILASLV
Ga0335072_107514903	3300032898	Soil	MATTPSTTIISNLKNASAPTTNTLKASSGGGTDIVGMIALAQTKALELKMCLTLLARVVDAADPNLATINNILASLS
Ga0335073_101492473	3300033134	Soil	MSSTPSTTIISNLKSATAPTSNTVKAANGAGIDAGGMLALAQTKALELKSCLTLLAAHTDSGDTNLTTINNILASLT
Ga0335073_101938714	3300033134	Soil	GATPPTANTLKAASTAGIDIQGMLALAQIKALELKVCLTLVVRATDGADPNLTTINNILASLT
Ga0335073_108715481	3300033134	Soil	AATPTANTMKAASAAGLDMQGMLALAQGKALELKACLTLLVRATDGADPNLTTLNNILASLV
Ga0314861_0003662_118_348	3300033977	Peatland	MSTASTTIISNLKSVAAPTGNTLKAAGTAGLDVCGMLALAQSKALELKTCLTLLARATDGADPNLATINNILASLV
Ga0314861_0010712_2885_3115	3300033977	Peatland	MSTASTTIISNLKSVDAPTGNTLKAAGTAGLDVCGMLALAQSKALELKACLTLLARATDGADPNLATINNILASLV
Ga0314861_0153616_89_319	3300033977	Peatland	MSTASTTIISNLKSTSTPTGNTLKAANTAGIDVCGMLALAQNKALELKACLNLLVRATDGADPNLATLNNILASLV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F092540

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences