NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F092522

Metagenome / Metatranscriptome Family F092522

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F092522
Family Type Metagenome / Metatranscriptome
Number of Sequences 107
Average Sequence Length 47 residues
Representative Sequence MPTPTEDQLAAWKQLQWATALITSRFRRDLAGAGLSLEQFDVLVHLA
Number of Associated Samples 91
Number of Associated Scaffolds 107

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 96.26 %
% of genes near scaffold ends (potentially truncated) 99.07 %
% of genes from short scaffolds (< 2000 bps) 96.26 %
Associated GOLD sequencing projects 89
AlphaFold2 3D model prediction Yes
3D model pTM-score0.56

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (96.262 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(42.991 % of family members)
Environment Ontology (ENVO) Unclassified
(50.467 % of family members)
Earth Microbiome Project Ontology (EMPO) Unclassified
(43.925 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 49.33%    β-sheet: 0.00%    Coil/Unstructured: 50.67%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.56
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 107 Family Scaffolds
PF00753Lactamase_B 3.74
PF03060NMO 1.87
PF10518TAT_signal 1.87
PF05721PhyH 1.87
PF13546DDE_5 0.93
PF02899Phage_int_SAM_1 0.93
PF00589Phage_integrase 0.93
PF00144Beta-lactamase 0.93
PF11716MDMPI_N 0.93
PF03734YkuD 0.93

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 107 Family Scaffolds
COG0516IMP dehydrogenase/GMP reductaseNucleotide transport and metabolism [F] 1.87
COG2070NAD(P)H-dependent flavin oxidoreductase YrpB, nitropropane dioxygenase familyGeneral function prediction only [R] 1.87
COG5285Ectoine hydroxylase-related dioxygenase, phytanoyl-CoA dioxygenase (PhyH) familySecondary metabolites biosynthesis, transport and catabolism [Q] 1.87
COG1376Lipoprotein-anchoring transpeptidase ErfK/SrfKCell wall/membrane/envelope biogenesis [M] 0.93
COG1680CubicO group peptidase, beta-lactamase class C familyDefense mechanisms [V] 0.93
COG1686D-alanyl-D-alanine carboxypeptidaseCell wall/membrane/envelope biogenesis [M] 0.93
COG2367Beta-lactamase class ADefense mechanisms [V] 0.93
COG3034Murein L,D-transpeptidase YafKCell wall/membrane/envelope biogenesis [M] 0.93
COG4973Site-specific recombinase XerCReplication, recombination and repair [L] 0.93
COG4974Site-specific recombinase XerDReplication, recombination and repair [L] 0.93

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms96.26 %
UnclassifiedrootN/A3.74 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2166559006|FI_contig28371All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella → Kribbella sp. VKM Ac-2541554Open in IMG/M
3300001356|JGI12269J14319_10242686All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella → Kribbella sp. VKM Ac-2541676Open in IMG/M
3300005340|Ga0070689_101444255All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella → Kribbella sp. VKM Ac-2541622Open in IMG/M
3300005435|Ga0070714_100176345All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes globisporus1942Open in IMG/M
3300005435|Ga0070714_101162813All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella → Kribbella sp. VKM Ac-2541752Open in IMG/M
3300005537|Ga0070730_10238245All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella → Kribbella sp. VKM Ac-25411204Open in IMG/M
3300005537|Ga0070730_11072376Not Available500Open in IMG/M
3300005542|Ga0070732_10478683Not Available753Open in IMG/M
3300005545|Ga0070695_101576403All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella → Kribbella sp. VKM Ac-2541548Open in IMG/M
3300005564|Ga0070664_101790450All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella → Kribbella sp. VKM Ac-2541582Open in IMG/M
3300006050|Ga0075028_100409707All Organisms → cellular organisms → Bacteria777Open in IMG/M
3300006174|Ga0075014_100545909All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella → Kribbella sp. VKM Ac-2541655Open in IMG/M
3300006175|Ga0070712_100392497All Organisms → cellular organisms → Bacteria1144Open in IMG/M
3300006175|Ga0070712_100955070All Organisms → cellular organisms → Bacteria740Open in IMG/M
3300006353|Ga0075370_10598425All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella → Kribbella sp. VKM Ac-2541668Open in IMG/M
3300006358|Ga0068871_101641652All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella → Kribbella sp. VKM Ac-2541609Open in IMG/M
3300006755|Ga0079222_11073548Not Available703Open in IMG/M
3300006806|Ga0079220_11018302All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella → Kribbella sp. VKM Ac-2541660Open in IMG/M
3300009177|Ga0105248_12296415All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella → Kribbella sp. VKM Ac-2541614Open in IMG/M
3300009525|Ga0116220_10409661All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella → Kribbella sp. VKM Ac-2541607Open in IMG/M
3300010043|Ga0126380_10686827All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella → Kribbella sp. VKM Ac-2541821Open in IMG/M
3300010047|Ga0126382_11302979All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella → Kribbella sp. VKM Ac-2541657Open in IMG/M
3300010343|Ga0074044_10127877All Organisms → cellular organisms → Bacteria1704Open in IMG/M
3300010358|Ga0126370_10777705All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella → Kribbella sp. VKM Ac-2541851Open in IMG/M
3300010359|Ga0126376_11438956All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella → Kribbella sp. VKM Ac-2541715Open in IMG/M
3300010360|Ga0126372_12532711All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella → Kribbella sp. VKM Ac-2541564Open in IMG/M
3300010361|Ga0126378_10829144All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella → Kribbella sp. VKM Ac-25411033Open in IMG/M
3300010379|Ga0136449_101997637All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella → Kribbella sp. VKM Ac-2541856Open in IMG/M
3300012005|Ga0120161_1081707All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella → Kribbella sp. VKM Ac-2541810Open in IMG/M
3300012971|Ga0126369_12502825All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella → Kribbella sp. VKM Ac-2541601Open in IMG/M
3300013294|Ga0120150_1042189All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella → Kribbella sp. VKM Ac-2541890Open in IMG/M
3300014056|Ga0120125_1187289All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella → Kribbella sp. VKM Ac-2541512Open in IMG/M
3300015373|Ga0132257_102474218All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella → Kribbella sp. VKM Ac-2541674Open in IMG/M
3300015374|Ga0132255_101576632All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella → Kribbella sp. VKM Ac-2541995Open in IMG/M
3300016319|Ga0182033_10227693All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella → Kribbella sp. VKM Ac-25411501Open in IMG/M
3300016357|Ga0182032_10585793All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella → Kribbella sp. VKM Ac-2541927Open in IMG/M
3300016357|Ga0182032_10604446All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella → Kribbella sp. VKM Ac-2541913Open in IMG/M
3300016371|Ga0182034_10777916All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella → Kribbella sp. VKM Ac-2541818Open in IMG/M
3300017928|Ga0187806_1086862All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella → Kribbella sp. VKM Ac-2541987Open in IMG/M
3300017939|Ga0187775_10430600All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella → Kribbella sp. VKM Ac-2541552Open in IMG/M
3300017944|Ga0187786_10134678All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella → Kribbella sp. VKM Ac-2541875Open in IMG/M
3300017966|Ga0187776_10506258All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella → Kribbella sp. VKM Ac-2541827Open in IMG/M
3300017973|Ga0187780_10783247All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella → Kribbella sp. VKM Ac-2541690Open in IMG/M
3300018064|Ga0187773_11053576Not Available537Open in IMG/M
3300020581|Ga0210399_10649649All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella → Kribbella sp. VKM Ac-2541870Open in IMG/M
3300021420|Ga0210394_11581380All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella → Kribbella sp. VKM Ac-2541552Open in IMG/M
3300021861|Ga0213853_10286103All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella → Kribbella sp. VKM Ac-2541673Open in IMG/M
3300027034|Ga0209730_1041296All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella → Kribbella sp. VKM Ac-2541535Open in IMG/M
3300027625|Ga0208044_1193081All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella → Kribbella sp. VKM Ac-2541547Open in IMG/M
3300027842|Ga0209580_10220653All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella → Kribbella sp. VKM Ac-2541942Open in IMG/M
3300027866|Ga0209813_10453600All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella → Kribbella sp. VKM Ac-2541525Open in IMG/M
3300027867|Ga0209167_10673235All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella → Kribbella sp. VKM Ac-2541566Open in IMG/M
3300027911|Ga0209698_10934054All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella → Kribbella sp. VKM Ac-2541649Open in IMG/M
3300028711|Ga0307293_10213699All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella → Kribbella sp. VKM Ac-2541614Open in IMG/M
3300031544|Ga0318534_10228204All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella → Kribbella sp. VKM Ac-25411074Open in IMG/M
3300031549|Ga0318571_10323698All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella → Kribbella sp. VKM Ac-2541585Open in IMG/M
3300031573|Ga0310915_10490602All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella → Kribbella sp. VKM Ac-2541873Open in IMG/M
3300031640|Ga0318555_10716528All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella → Kribbella sp. VKM Ac-2541540Open in IMG/M
3300031668|Ga0318542_10103504All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella → Kribbella sp. VKM Ac-25411377Open in IMG/M
3300031668|Ga0318542_10567622All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella → Kribbella sp. VKM Ac-2541591Open in IMG/M
3300031668|Ga0318542_10741062All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella → Kribbella sp. VKM Ac-2541514Open in IMG/M
3300031679|Ga0318561_10350848All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella → Kribbella sp. VKM Ac-2541809Open in IMG/M
3300031680|Ga0318574_10163669All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella → Kribbella sp. VKM Ac-25411268Open in IMG/M
3300031680|Ga0318574_10414490All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella → Kribbella sp. VKM Ac-2541787Open in IMG/M
3300031681|Ga0318572_10842192All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella → Kribbella sp. VKM Ac-2541545Open in IMG/M
3300031682|Ga0318560_10532360All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella → Kribbella sp. VKM Ac-2541637Open in IMG/M
3300031682|Ga0318560_10691425All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella → Kribbella sp. VKM Ac-2541551Open in IMG/M
3300031719|Ga0306917_10315461All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella → Kribbella sp. VKM Ac-25411210Open in IMG/M
3300031723|Ga0318493_10761359All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella → Kribbella sp. VKM Ac-2541544Open in IMG/M
3300031736|Ga0318501_10173059All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella → Kribbella sp. VKM Ac-25411120Open in IMG/M
3300031736|Ga0318501_10576042All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella → Kribbella sp. VKM Ac-2541617Open in IMG/M
3300031751|Ga0318494_10120085All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella → Kribbella sp. VKM Ac-25411464Open in IMG/M
3300031753|Ga0307477_10191814All Organisms → cellular organisms → Bacteria1423Open in IMG/M
3300031765|Ga0318554_10751888All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella → Kribbella sp. VKM Ac-2541546Open in IMG/M
3300031770|Ga0318521_10354350All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella → Kribbella sp. VKM Ac-2541870Open in IMG/M
3300031771|Ga0318546_10649355All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella → Kribbella sp. VKM Ac-2541742Open in IMG/M
3300031778|Ga0318498_10369850All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella → Kribbella sp. VKM Ac-2541639Open in IMG/M
3300031780|Ga0318508_1222328All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella → Kribbella sp. VKM Ac-2541542Open in IMG/M
3300031795|Ga0318557_10113511All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella → Kribbella sp. VKM Ac-25411207Open in IMG/M
3300031796|Ga0318576_10090237All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1388Open in IMG/M
3300031796|Ga0318576_10502079All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella → Kribbella sp. VKM Ac-2541572Open in IMG/M
3300031798|Ga0318523_10258526All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella870Open in IMG/M
3300031832|Ga0318499_10281643All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella → Kribbella sp. VKM Ac-2541643Open in IMG/M
3300031845|Ga0318511_10579439All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella → Kribbella sp. VKM Ac-2541522Open in IMG/M
3300031860|Ga0318495_10197031All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella → Kribbella sp. VKM Ac-2541907Open in IMG/M
3300031860|Ga0318495_10253322All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella → Kribbella sp. VKM Ac-2541787Open in IMG/M
3300031860|Ga0318495_10489387All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella → Kribbella sp. VKM Ac-2541537Open in IMG/M
3300031893|Ga0318536_10024718All Organisms → cellular organisms → Bacteria2765Open in IMG/M
3300031896|Ga0318551_10191832All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella → Kribbella sp. VKM Ac-25411128Open in IMG/M
3300031896|Ga0318551_10459068All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella → Kribbella sp. VKM Ac-2541728Open in IMG/M
3300031897|Ga0318520_10763626All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella → Kribbella sp. VKM Ac-2541606Open in IMG/M
3300031910|Ga0306923_11984050All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella → Kribbella sp. VKM Ac-2541591Open in IMG/M
3300031912|Ga0306921_10297235All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1891Open in IMG/M
3300031912|Ga0306921_11143386All Organisms → cellular organisms → Bacteria870Open in IMG/M
3300031942|Ga0310916_10015958All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria5177Open in IMG/M
3300031942|Ga0310916_11327692All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella → Kribbella sp. VKM Ac-2541591Open in IMG/M
3300031954|Ga0306926_10418540All Organisms → cellular organisms → Bacteria1653Open in IMG/M
3300031959|Ga0318530_10357312All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella → Kribbella sp. VKM Ac-2541605Open in IMG/M
3300032001|Ga0306922_11856988All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella → Kribbella sp. VKM Ac-2541591Open in IMG/M
3300032008|Ga0318562_10125956All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella → Kribbella sp. VKM Ac-25411466Open in IMG/M
3300032008|Ga0318562_10381840All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella → Kribbella sp. VKM Ac-2541819Open in IMG/M
3300032043|Ga0318556_10258689All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria909Open in IMG/M
3300032059|Ga0318533_10720080All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella → Kribbella sp. VKM Ac-2541732Open in IMG/M
3300032068|Ga0318553_10759182All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella → Kribbella sp. VKM Ac-2541507Open in IMG/M
3300032805|Ga0335078_10282774All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2242Open in IMG/M
3300033158|Ga0335077_10039191All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia5842Open in IMG/M
3300033290|Ga0318519_10675208All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella → Kribbella sp. VKM Ac-2541631Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil42.99%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil9.35%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil6.54%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil4.67%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland4.67%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil3.74%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds2.80%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost2.80%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere2.80%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.87%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil1.87%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil1.87%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere1.87%
Populus EndosphereHost-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere1.87%
WatershedsEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds0.93%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment0.93%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.93%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil0.93%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.93%
Bog Forest SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil0.93%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil0.93%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.93%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere0.93%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.93%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.93%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2166559006Grass soil microbial communities from Rothamsted Park, UK - FI (heavy metals 2g/kg) assembledEnvironmentalOpen in IMG/M
3300001356Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007EnvironmentalOpen in IMG/M
3300005340Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaGEnvironmentalOpen in IMG/M
3300005435Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaGEnvironmentalOpen in IMG/M
3300005537Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1EnvironmentalOpen in IMG/M
3300005542Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1EnvironmentalOpen in IMG/M
3300005545Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaGEnvironmentalOpen in IMG/M
3300005564Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaGHost-AssociatedOpen in IMG/M
3300006050Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014EnvironmentalOpen in IMG/M
3300006174Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014EnvironmentalOpen in IMG/M
3300006175Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaGEnvironmentalOpen in IMG/M
3300006353Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5Host-AssociatedOpen in IMG/M
3300006358Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2Host-AssociatedOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300009525Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaGEnvironmentalOpen in IMG/M
3300010043Tropical forest soil microbial communities from Panama - MetaG Plot_26EnvironmentalOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010343Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1EnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010379Sb_50d combined assemblyEnvironmentalOpen in IMG/M
3300012005Permafrost microbial communities from Nunavut, Canada - A15_80cm_0MEnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300013294Permafrost microbial communities from Nunavut, Canada - A3_65cm_0MEnvironmentalOpen in IMG/M
3300014056Permafrost microbial communities from Nunavut, Canada - A20_5cm_0MEnvironmentalOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300016319Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00HEnvironmentalOpen in IMG/M
3300016357Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000EnvironmentalOpen in IMG/M
3300016371Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172EnvironmentalOpen in IMG/M
3300017928Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1EnvironmentalOpen in IMG/M
3300017939Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MGEnvironmentalOpen in IMG/M
3300017944Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_10_20_MGEnvironmentalOpen in IMG/M
3300017966Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MGEnvironmentalOpen in IMG/M
3300017973Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MGEnvironmentalOpen in IMG/M
3300018064Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MGEnvironmentalOpen in IMG/M
3300020581Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-MEnvironmentalOpen in IMG/M
3300021420Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-MEnvironmentalOpen in IMG/M
3300021861Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2016 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300027034Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027625Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027842Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027866Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes)Host-AssociatedOpen in IMG/M
3300027867Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027911Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)EnvironmentalOpen in IMG/M
3300028711Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150EnvironmentalOpen in IMG/M
3300031544Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26EnvironmentalOpen in IMG/M
3300031549Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24EnvironmentalOpen in IMG/M
3300031573Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111EnvironmentalOpen in IMG/M
3300031640Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23EnvironmentalOpen in IMG/M
3300031668Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23EnvironmentalOpen in IMG/M
3300031679Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23EnvironmentalOpen in IMG/M
3300031680Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22EnvironmentalOpen in IMG/M
3300031681Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20EnvironmentalOpen in IMG/M
3300031682Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22EnvironmentalOpen in IMG/M
3300031719Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)EnvironmentalOpen in IMG/M
3300031723Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23EnvironmentalOpen in IMG/M
3300031736Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21EnvironmentalOpen in IMG/M
3300031751Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24EnvironmentalOpen in IMG/M
3300031753Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515EnvironmentalOpen in IMG/M
3300031765Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22EnvironmentalOpen in IMG/M
3300031770Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17EnvironmentalOpen in IMG/M
3300031771Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19EnvironmentalOpen in IMG/M
3300031778Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24EnvironmentalOpen in IMG/M
3300031780Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21EnvironmentalOpen in IMG/M
3300031795Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19EnvironmentalOpen in IMG/M
3300031796Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24EnvironmentalOpen in IMG/M
3300031798Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19EnvironmentalOpen in IMG/M
3300031832Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25EnvironmentalOpen in IMG/M
3300031845Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18EnvironmentalOpen in IMG/M
3300031860Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25EnvironmentalOpen in IMG/M
3300031893Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28EnvironmentalOpen in IMG/M
3300031896Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19EnvironmentalOpen in IMG/M
3300031897Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16EnvironmentalOpen in IMG/M
3300031910Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)EnvironmentalOpen in IMG/M
3300031912Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)EnvironmentalOpen in IMG/M
3300031942Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176EnvironmentalOpen in IMG/M
3300031954Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)EnvironmentalOpen in IMG/M
3300031959Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24EnvironmentalOpen in IMG/M
3300032001Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)EnvironmentalOpen in IMG/M
3300032008Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18EnvironmentalOpen in IMG/M
3300032043Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24EnvironmentalOpen in IMG/M
3300032059Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27EnvironmentalOpen in IMG/M
3300032068Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21EnvironmentalOpen in IMG/M
3300032805Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2EnvironmentalOpen in IMG/M
3300033158Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1EnvironmentalOpen in IMG/M
3300033290Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
FI_005533602166559006Grass SoilMPTLTDDQLAAWKQLQWATALITSQFRRDLAAAGLSLEQFDVLVHLAWAP
JGI12269J14319_1024268613300001356Peatlands SoilMQTPTEDQLAVWKQLQWATALIMSRFRRDLAGAGLSLEQFDVLV
Ga0070689_10144425513300005340Switchgrass RhizosphereVTKPTADQLAAWRQLQWANALIMSRFRRDLAEFGVTIEEFDVLVHLAWAPGGALPLQ
Ga0070714_10017634533300005435Agricultural SoilMPAPTEDQLAAWKRLQRATALIMSRFRRDLAAAGLSLEQFDVLVHL
Ga0070714_10116281333300005435Agricultural SoilMQTPTQDQLAAWKQLQWATALITRRFRRDLAAAGLSLEQFDVLVHLA
Ga0070730_1023824513300005537Surface SoilMPTLTDDQLAAWKQLQWATALITSQFRRDLAAAGLSLEQ
Ga0070730_1107237623300005537Surface SoilMPALTDDQLAAWKQLQWATALITSQFRRDLAAAGLSLEQFD
Ga0070732_1047868313300005542Surface SoilMPALTDDQLAAWKQLQWATALITSQFRRDLAAAGLSLEQFDVLVHLAW
Ga0070695_10157640323300005545Corn, Switchgrass And Miscanthus RhizosphereVTKPTSDQLAAWRQLQWANALIMSRFRRDLAEFDLTIEEFDVLVHL
Ga0070664_10179045013300005564Corn RhizosphereVTKPTADQLAAWRQLQWANALIMSRFRRDLAEFDVTIEEFDVL
Ga0075028_10040970713300006050WatershedsMPTLTDDQLAAWKQLQWATALITGRFRRDLAGAGLSLEQFDVLVHLAWAPSGTLPLH
Ga0075014_10054590933300006174WatershedsVTKLTSEQLAVWRQLQWANALIMNRFRRDLTEFDLSIEEFDV
Ga0070712_10039249713300006175Corn, Switchgrass And Miscanthus RhizosphereMPILTEDQLAVWKQLQWAAALITNRFRRDLAGIGLSLEQFDVLIHLAGAPSG
Ga0070712_10095507013300006175Corn, Switchgrass And Miscanthus RhizosphereMQTPTQDQLAAWKQLQRATALITRRFRRDLAAAGLSLEQFDVLAHLARAPSGTLPLH
Ga0075370_1059842513300006353Populus EndosphereVTKPTSDQLTAWRQLQWANALIMSRFRRDLAEFDVTIEEFDVLVHLAWAAEG
Ga0068871_10164165223300006358Miscanthus RhizosphereMPTLTEDQLAAWKQLQWATALITGRFRHDLAGIGLSLEQFDVLIHLAG
Ga0079222_1107354813300006755Agricultural SoilMPALTDDQLAAWKQLQWATALITSQFRRDLAAAGLSLEQ
Ga0079220_1101830213300006806Agricultural SoilMPALTDDQLAAWKQLQWATALITSQFRRDLAAAGLSL
Ga0105248_1229641523300009177Switchgrass RhizosphereVTKPTSDQLAAWRQLQWANALIMSRFRRDLAEFDVTIEEFDVLVHLAWAPGGALPLQEL
Ga0116220_1040966113300009525Peatlands SoilMQTPTEDQIAAWKQLQWATALITSRFRRDLAGAGLSLEQ
Ga0126380_1068682713300010043Tropical Forest SoilMPTLTDDQLAAWKQLQWATALITSRFRRDLAAAGL
Ga0126382_1130297913300010047Tropical Forest SoilVPTLTDDELTVWKQLQWATALLMARFRRDLAGSGLSLEEFDVLVHLMSAPAATLALHE
Ga0074044_1012787713300010343Bog Forest SoilMPALTDDQLAAWKQLQWATALITGRFRSDLARSGLSLE
Ga0126370_1077770513300010358Tropical Forest SoilMAKLTNDQLAAWRHLQWATSLIMSRFRADLADDGMSLVEFDVLVH
Ga0126376_1143895613300010359Tropical Forest SoilMQTLTEDQLAVWKQLQWATALIMNRFRRDLADAGL
Ga0126372_1253271113300010360Tropical Forest SoilMPALTDDQLAAWKQLQWATALITSQFRRDLAAAGLSLEQF
Ga0126378_1082914423300010361Tropical Forest SoilMPTPTQDQLAAWKQLQWATALITSRFRRDLAAAGLSLEQFDVLVHLAWAPS
Ga0136449_10199763723300010379Peatlands SoilMPTVTDDQLAVWKQLQWATTLIMGRFRRDLAGSGLSLEEFDALIHLAQA
Ga0120161_108170713300012005PermafrostMQNLTTDQLAVWKQLQWATTLIMSRFRRDLAGAGLSLEQFDVLVHLAWAPSGTLPLHELS
Ga0126369_1250282523300012971Tropical Forest SoilMMPMPAPTEDQLAVWKQLQWATSLIMSRFRRDLAEAGLSLEQFDVLVHLA
Ga0120150_104218923300013294PermafrostMQNLTTDQLAVWKQLQWATTLIMSRFRRDLAGAGLSLEQFDVLVHLAWAPSG
Ga0120125_118728913300014056PermafrostMQNLTTDQLAVWKQLQWATTLIMSRFRRDLAGAGLSLEQFDVLVHLA
Ga0132257_10247421823300015373Arabidopsis RhizosphereMPALTDDQLAAWKQLQWATALITGRFRRDLAAAGLSLEQFDVLVH
Ga0132255_10157663233300015374Arabidopsis RhizosphereMQNLTTDQLAVWKQLQWATTLIMSRFRRDLAGAGLSLEQFDVLVHLAWAP
Ga0182033_1022769313300016319SoilMQTLTEDQLAAWKQLQWAAALITSRFRRDLAGAGLSLEQFDVLV
Ga0182032_1058579313300016357SoilMQTPTQDQLAAWKQLQWATALITGRFRRDLAAAGLSLEQFDVL
Ga0182032_1060444613300016357SoilMTRPNQTQLAVWRRFQWANALIMGRFRRDLGDAGLTIEEFDV
Ga0182034_1077791613300016371SoilMPAPTEDQLAAWKQLQWAAALITSRFRRDLAGAGL
Ga0187806_108686213300017928Freshwater SedimentMPTLTDDQLAAWKQLQWATALITSQFRRDLAAAGLSLEQFDVLVHLAWAPSGT
Ga0187775_1043060013300017939Tropical PeatlandMQTPTQDQLAAWKQLQWATALITGRFRRDLAAAGLSLEQFDVLVHLA
Ga0187786_1013467833300017944Tropical PeatlandVPTLTDDQLAVWRQLQWATALIMARFRRDLAGSGLSLEEFDVLVHLSWAP
Ga0187776_1050625813300017966Tropical PeatlandMQTPTQDQLAAWKQLQWATALITSRFRRDLAEAGLSL
Ga0187780_1078324713300017973Tropical PeatlandMQTPTQDQLAAWKQLQWATALITGRFRRDLAAAGLSLEQFDVLVHLAWAPSGT
Ga0187773_1105357623300018064Tropical PeatlandMPTPTQDQLAAWKQLQWATALITGRFRRDLAAAGLSLEQFDVLVHLAWAPSGTLPLHE
Ga0210399_1064964933300020581SoilMPTPTDDQLAAWKQLQWATALITSQFRRDLAAAGLSLEQFDVLVH
Ga0210394_1158138023300021420SoilMQTPTQDQLAAWKQLQWATALITGRFRRDLAAAGLSLEQFDVLVHLARAPSGTL
Ga0213853_1028610313300021861WatershedsMPTLTDDQLAAWKQLQWATALITSRFRRDLAAAGLSLEQFDVLVHLAWA
Ga0209730_104129613300027034Forest SoilMPALTDDQLAAWKQLQWATALITSRFRRDLAAAGLSLEQFDVLVHLAWAPS
Ga0208044_119308123300027625Peatlands SoilMLRSVAKPSSSQLAVWRQLQWATALIMGRFRRDLADVGLTIEEFDVLVHLAW
Ga0209580_1022065333300027842Surface SoilMPALTDDQLAAWKQLQWATALITSQFRRDLAAAGLSLEQFDVLVHLAWAPSG
Ga0209813_1045360013300027866Populus EndosphereVTKPTSDQLTAWRQLQWANALIMSRFRRDLAEFDVTIEEFDVLV
Ga0209167_1067323523300027867Surface SoilMPALTDDQLAAWKQLQWATALITSQFRRDLAAAGLSLEQFDVLVHLAWAPSGTL
Ga0209698_1093405413300027911WatershedsMQTPTEDQIAAWKQLQWATALITSRFRRDLAGAGLSLEQFDVLVHLAWA
Ga0307293_1021369933300028711SoilVTKPTANQLAAWRQLQWANALIMSRFRRDLAEFDLTIEEFDVLVHL
Ga0318534_1022820433300031544SoilMPALTEDQLAAWRQLQWATALITSRFRRDLAAAGLSLEQFDVLV
Ga0318571_1032369833300031549SoilMPTPTEDQLAVWKQLQWATALITGRFRRDLAAAGLSLEQFDV
Ga0310915_1049060213300031573SoilMPALTEDQLAAWRQLQWATALITSRFRRDLAAAGLSLEQFDVLVHLAWAPSG
Ga0318555_1071652813300031640SoilMPTPTEDQLAAWKQLQWAAALITSRFRRDLAGAGLSLEQFDVLVHLAWAPS
Ga0318542_1010350413300031668SoilMPAPNQDQIAVWKQLQWATALITGRFRRDLAGAGLSLEQFDVLVHLAWAPSATLPL
Ga0318542_1056762213300031668SoilMQTPTQDQLAAWKQLQWTTALITGRFRRDLAAAGLSLEQFDVLVHLARAP
Ga0318542_1074106213300031668SoilMPALTEDQLAAWRQLQWATALITSRFRRDLAAAGLSLE
Ga0318561_1035084813300031679SoilMQTLTEDQLAAWKQLQWAAALITSRFRRDLAGAGLSLEQFDVL
Ga0318574_1016366913300031680SoilMPAPAQDQLAAWKQLQWATALITGRFRRDLAAAGLSLEQFDVLAHLARAPSGTLPLHQ
Ga0318574_1041449033300031680SoilMPALTEDQLAAWRQLQWATALITSRFRRDLASAGLSLEQFDVLVH
Ga0318572_1084219223300031681SoilMPALTEDQLAAWKQLQWATALITGRFRRDLAGLGLSLEQFDVLIHLAGAPSG
Ga0318560_1053236013300031682SoilMPAPNQDQIAVWKQLQWATALITGRFRRDLAGAGLSLEQFDVL
Ga0318560_1069142523300031682SoilMPAPTEDQLAAWKQLQWAAALITSRFRRDLAGAGLSLEQFDVLVH
Ga0306917_1031546113300031719SoilMPTPTEDQLAAWKQLQWATALITSRFRRDLAGAGL
Ga0318493_1076135913300031723SoilMQTPTEDQLAAWKQLQWAAALITSRFRRDLAAAGLSLEQFDVLVHLAWAPSGTLPL
Ga0318501_1017305933300031736SoilMPTPTEDQLAAWKQLQWAAALITSRFRRDLAGAGLSLEQFDVLVHLAWAPSG
Ga0318501_1057604223300031736SoilMPAPNQDQIAVWKQLQWATALITGRFRRDLAGAGLSLEQFD
Ga0318494_1012008533300031751SoilVPVLDDDQLAVWKQLQWATALIMARFRRDLAGSGLSLEEFDVLV
Ga0307477_1019181413300031753Hardwood Forest SoilMPTLTDDQLAAWKQLQWATALITSQFRRDLAAAGLSLEQFDVLV
Ga0318554_1075188813300031765SoilMPALTEDQLAAWRQLQWATALITSRFRRDLAAAGL
Ga0318521_1035435033300031770SoilMPTLTDDQLAAWKQLQWATALITSRFRRDLAAAGLSLEQFDVLVHLAWAPSGTLP
Ga0318546_1064935513300031771SoilMPAPAQDQLAAWKQLQWATALITGRFRRDLAAAGLSLEQFDVLAH
Ga0318498_1036985013300031778SoilMQTLTEDQLAAWKQLQWATALIMNRFRRDLADAGLSLEQFDVLVHLAWAPSG
Ga0318508_122232823300031780SoilMPTLTEDQLAAWKQLQWATALITSRFRRDLAGAGLSLEQFDVLV
Ga0318557_1011351133300031795SoilMPTPTEDQLAAWKQLQWATALITSRFRRDLAGAGLSLEQFDVLVHLAWAPSG
Ga0318576_1009023713300031796SoilMPAPNQDQIAVWKQLQWATALITGRFRRDLAGAGLSLEQFDVLVHLAWAPS
Ga0318576_1050207913300031796SoilMPAPAQDQLAAWKQLQWATALITGRFRRDLAAAGLSLEQFDVLVHLAWAPSG
Ga0318523_1025852613300031798SoilMPTPTEDQLAVWKQLQWATALITGRFRRDLAAAGL
Ga0318499_1028164313300031832SoilMQTPTQDQLAAWKQLQWATALITSRFRRDLAAAGL
Ga0318511_1057943923300031845SoilMQTLTQDQLAVWKQLQWATALIMNRFRRDLAGAGLSLEQFDVLV
Ga0318495_1019703113300031860SoilMPAPNQDQIAVWKQLQWATALITGRFRRDLAGAGLS
Ga0318495_1025332213300031860SoilMPAPTEDQLAAWKQLQWAAALITSRFRRDLAGAGLS
Ga0318495_1048938723300031860SoilMPTLTDDQLAAWKQLQWATALITSRFRRDLAAAGLSLEQFDVLVHLAWAPSG
Ga0318536_1002471843300031893SoilMQTPTEDQLAAWKQLQWAAALITSRFRRDLAAAGLSLEQFDVLGHSRCTS
Ga0318551_1019183233300031896SoilVPVLDDDQLAVWKQLQWATALIMARFRRDLAGSGLSLEEFDVLVH
Ga0318551_1045906813300031896SoilMPAPTEDQLAAWKQLQWAAALITSRFRRDLAGAGLSLEQFDVLVHLAWAPSGTLP
Ga0318520_1076362623300031897SoilMQTPTQDQLAAWKQLQWATALITSRFRRDLASAGLSL
Ga0306923_1198405013300031910SoilMPTPTEDQLAAWKQLQWAAALITSRFRRDLAGAGLSLEQFDV
Ga0306921_1029723543300031912SoilMQTPTEDQLAAWKQLQWAAALITSRFRRDLAAAGLSLEQFDVLVHLAWAPS
Ga0306921_1114338633300031912SoilVPLLDDDQLAVWKQLQWATALIMARFRRDLAGSGLSLEEFDVLV
Ga0310916_1001595873300031942SoilMQTLTEDQLAAWKQLQWAAALITSRFRRDLAGAGLSLEQFDVLVHLAWAPSGTLP
Ga0310916_1132769223300031942SoilMPAPNQDQIAVWKQLQWATALITGRFRRDLAGAGLSLEQFDVLVHLAWAP
Ga0306926_1041854043300031954SoilMPAPTEDQLAAWKQLQWAAALITSRFRRDLAGAGLSLEQFDV
Ga0318530_1035731213300031959SoilMPTPTEDQLAAWKQLQWATALITSRFRRDLAGAGLS
Ga0306922_1185698813300032001SoilMPAPTEDQLAAWKQLQWAAALITSRFRRDLAGAGLSLEQFDVLVHL
Ga0318562_1012595633300032008SoilMPTPTEDQLAAWKQLQWATALITSRFRRDLAGAGLSLEQFDVLVHLAWAPSGTLPLHQ
Ga0318562_1038184023300032008SoilMQTLTEDQLAAWKQLQWAAALITSRFRRDLAGAGLSLEQ
Ga0318556_1025868933300032043SoilMPALTEDQLAAWRQLQWATALITSRFRRDLAAAGLSLEQFDVLVHLAWAPSGTLP
Ga0318533_1072008023300032059SoilMPTPTEDQLAAWKQLQWATALITSRFRRDLAGAGLSLEQFDVLVHLA
Ga0318553_1075918213300032068SoilMPAPNQDQIAVWKQLQWATALITGRFRRDLAGAGLSLEQFDVLVHLA
Ga0335078_1028277413300032805SoilMPTLTEDQLAAWKQLQWATALITGRFRRDLAAAGLSLEQFDVLVHLAWAPSGTLPLHE
Ga0335077_1003919113300033158SoilMQTPTQDQLAAWKQLQWATALITGRFRRDLAAAGLSLEQFDVLVHLAWAPSGTL
Ga0318519_1067520813300033290SoilMQTPTQDQLAAWKQLQWTTALITGRFRRDLAAAGLSLEQFDVLVHLAWAPSGTLPLHE

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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