Metagenome Family F092520

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F092520
Family Type	Metagenome
Number of Sequences	107
Average Sequence Length	55 residues
Representative Sequence	MRRIIQANIDRLKELLKTETDPTKRAMEARLLAEEELKQKQLPAYDKKETKAY
Number of Associated Samples	86
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	73.83 %
% of genes near scaffold ends (potentially truncated)	23.36 %
% of genes from short scaffolds (< 2000 bps)	85.05 %
Associated GOLD sequencing projects	80
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.60

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (87.850 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere (9.346 % of family members)
Environment Ontology (ENVO)	Unclassified (38.318 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (30.841 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 45.68% β-sheet: 0.00% Coil/Unstructured: 54.32%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.60
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.60
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF04392	ABC_sub_bind	2.80
PF08483	Obsolete Pfam Family	1.87
PF00326	Peptidase_S9	1.87
PF03734	YkuD	0.93
PF13185	GAF_2	0.93
PF13505	OMP_b-brl	0.93
PF02518	HATPase_c	0.93
PF05128	DUF697	0.93
PF14534	DUF4440	0.93
PF07536	HWE_HK	0.93
PF02195	ParBc	0.93
PF02371	Transposase_20	0.93
PF04773	FecR	0.93
PF00011	HSP20	0.93
PF09084	NMT1	0.93
PF13586	DDE_Tnp_1_2	0.93
PF13660	DUF4147	0.93
PF00155	Aminotran_1_2	0.93
PF06411	HdeA	0.93
PF00072	Response_reg	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	2.80
COG0071	Small heat shock protein IbpA, HSP20 family	Posttranslational modification, protein turnover, chaperones [O]	0.93
COG0715	ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.93
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	0.93
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	0.93
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.93
COG3768	Uncharacterized membrane protein YcjF, UPF0283 family	Function unknown [S]	0.93
COG3920	Two-component sensor histidine kinase, HisKA and HATPase domains	Signal transduction mechanisms [T]	0.93
COG4251	Bacteriophytochrome (light-regulated signal transduction histidine kinase)	Signal transduction mechanisms [T]	0.93
COG4521	ABC-type taurine transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	87.85 %
Unclassified	root	N/A	12.15 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	87.85 %
Unclassified	root	N/A	12.15 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	87.85 %
Unclassified	root	N/A	12.15 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	86.92 %
Unclassified	root	N/A	12.15 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	84.11 %
Unclassified	root	N/A	12.15 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	80.37 %
Unclassified	root	N/A	12.15 %

Name	Rank	Taxonomy	Distribution
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	49.53 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	20.56 %
Unclassified	root	N/A	12.15 %

Name	Rank	Taxonomy	Distribution
Pseudolabrys	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys	49.53 %
Unclassified	root	N/A	12.15 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	9.35 %
Tardiphaga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Tardiphaga	0.93 %
Nitrobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter	0.93 %

Name	Rank	Taxonomy	Distribution
unclassified Pseudolabrys	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys	48.60 %
Unclassified	root	N/A	12.15 %
Pseudolabrys taiwanensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	0.93 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.93 %
unclassified Nitrobacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter → unclassified Nitrobacter	0.93 %
Tardiphaga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Tardiphaga	0.93 %

Name	Rank	Taxonomy	Distribution
Pseudolabrys sp. FHR47	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. FHR47	48.60 %
Unclassified	root	N/A	12.15 %
Nitrobacter sp. Nb-311A	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter → unclassified Nitrobacter → Nitrobacter sp. Nb-311A	0.93 %
Pseudolabrys taiwanensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	0.93 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.93 %
Tardiphaga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Tardiphaga	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2067725004\|GPKC_F5V46DG02DE95M	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. FHR47	503	Open in IMG/M
2228664021\|ICCgaii200_c0859165	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. FHR47	804	Open in IMG/M
3300000559\|F14TC_105656082	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. FHR47	667	Open in IMG/M
3300000787\|JGI11643J11755_11756954	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. FHR47	602	Open in IMG/M
3300000787\|JGI11643J11755_11764656	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	640	Open in IMG/M
3300000953\|JGI11615J12901_10597430	Not Available	677	Open in IMG/M
3300001431\|F14TB_101527257	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1544	Open in IMG/M
3300001605\|Draft_10023763	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	5711	Open in IMG/M
3300001605\|Draft_10191341	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1249	Open in IMG/M
3300002856\|draft_11207599	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter → unclassified Nitrobacter → Nitrobacter sp. Nb-311A	503	Open in IMG/M
3300002856\|draft_11516675	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4745	Open in IMG/M
3300003994\|Ga0055435_10025929	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. FHR47	1283	Open in IMG/M
3300003995\|Ga0055438_10084336	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. FHR47	877	Open in IMG/M
3300004006\|Ga0055453_10265472	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. FHR47	548	Open in IMG/M
3300004009\|Ga0055437_10014865	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. FHR47	1722	Open in IMG/M
3300004062\|Ga0055500_10150380	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	551	Open in IMG/M
3300004157\|Ga0062590_101412032	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. FHR47	693	Open in IMG/M
3300004463\|Ga0063356_101376056	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1037	Open in IMG/M
3300004479\|Ga0062595_101952004	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. FHR47	565	Open in IMG/M
3300004643\|Ga0062591_100190378	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. FHR47	1492	Open in IMG/M
3300004643\|Ga0062591_102666644	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. FHR47	528	Open in IMG/M
3300005093\|Ga0062594_102669128	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	552	Open in IMG/M
3300005183\|Ga0068993_10151538	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. FHR47	782	Open in IMG/M
3300005331\|Ga0070670_101892164	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. FHR47	549	Open in IMG/M
3300005436\|Ga0070713_101650840	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	622	Open in IMG/M
3300005511\|Ga0077121_10227091	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1461	Open in IMG/M
3300005529\|Ga0070741_10389576	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1283	Open in IMG/M
3300005537\|Ga0070730_10543540	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	744	Open in IMG/M
3300006041\|Ga0075023_100014424	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2102	Open in IMG/M
3300006047\|Ga0075024_100754256	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	540	Open in IMG/M
3300006174\|Ga0075014_100569770	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	643	Open in IMG/M
3300007519\|Ga0105055_10047675	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4629	Open in IMG/M
3300009094\|Ga0111539_10135088	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2889	Open in IMG/M
3300010371\|Ga0134125_11128974	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	857	Open in IMG/M
3300010371\|Ga0134125_12750831	Not Available	535	Open in IMG/M
3300010379\|Ga0136449_103087224	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. FHR47	647	Open in IMG/M
3300010396\|Ga0134126_10020676	All Organisms → cellular organisms → Bacteria → Proteobacteria	8348	Open in IMG/M
3300010396\|Ga0134126_10111119	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. FHR47	3357	Open in IMG/M
3300010399\|Ga0134127_10582685	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1144	Open in IMG/M
3300011119\|Ga0105246_11916376	Not Available	569	Open in IMG/M
3300011419\|Ga0137446_1024983	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. FHR47	1242	Open in IMG/M
3300012493\|Ga0157355_1038638	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. FHR47	525	Open in IMG/M
3300012501\|Ga0157351_1037955	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. FHR47	589	Open in IMG/M
3300012914\|Ga0157297_10399794	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. FHR47	550	Open in IMG/M
3300012988\|Ga0164306_11917491	Not Available	515	Open in IMG/M
3300014158\|Ga0181521_10579179	Not Available	528	Open in IMG/M
3300014318\|Ga0075351_1100237	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. FHR47	624	Open in IMG/M
3300014320\|Ga0075342_1202359	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. FHR47	561	Open in IMG/M
3300014324\|Ga0075352_1049176	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	989	Open in IMG/M
3300014968\|Ga0157379_11966442	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	577	Open in IMG/M
3300015371\|Ga0132258_10085723	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7362	Open in IMG/M
3300015371\|Ga0132258_11007627	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2105	Open in IMG/M
3300015371\|Ga0132258_11577323	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1657	Open in IMG/M
3300015371\|Ga0132258_12293615	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. FHR47	1354	Open in IMG/M
3300015371\|Ga0132258_13529944	Not Available	1071	Open in IMG/M
3300015372\|Ga0132256_100661148	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1160	Open in IMG/M
3300015374\|Ga0132255_100459721	Not Available	1864	Open in IMG/M
3300015374\|Ga0132255_100481289	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1821	Open in IMG/M
3300015374\|Ga0132255_101661393	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. FHR47	969	Open in IMG/M
3300015374\|Ga0132255_104820092	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	571	Open in IMG/M
3300015374\|Ga0132255_105634129	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. FHR47	530	Open in IMG/M
3300017944\|Ga0187786_10513239	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. FHR47	546	Open in IMG/M
3300017966\|Ga0187776_11216888	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. FHR47	565	Open in IMG/M
3300018029\|Ga0187787_10165239	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. FHR47	761	Open in IMG/M
3300018476\|Ga0190274_11523371	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	760	Open in IMG/M
3300018481\|Ga0190271_10199484	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Tardiphaga	1990	Open in IMG/M
3300018481\|Ga0190271_12068816	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. FHR47	677	Open in IMG/M
3300022881\|Ga0224545_1030255	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. FHR47	772	Open in IMG/M
3300025297\|Ga0209758_1152196	Not Available	585	Open in IMG/M
3300025551\|Ga0210131_1040617	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. FHR47	735	Open in IMG/M
3300025580\|Ga0210138_1014767	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1585	Open in IMG/M
3300025891\|Ga0209585_10325716	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. FHR47	619	Open in IMG/M
3300025900\|Ga0207710_10463069	Not Available	655	Open in IMG/M
3300025928\|Ga0207700_11723562	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. FHR47	552	Open in IMG/M
3300025955\|Ga0210071_1022620	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. FHR47	777	Open in IMG/M
3300025986\|Ga0207658_10431212	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. FHR47	1164	Open in IMG/M
3300026013\|Ga0208534_1018777	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. FHR47	516	Open in IMG/M
3300026088\|Ga0207641_11639647	Not Available	645	Open in IMG/M
3300026088\|Ga0207641_11967166	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. FHR47	586	Open in IMG/M
3300027364\|Ga0209967_1058519	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. FHR47	596	Open in IMG/M
3300027617\|Ga0210002_1076409	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. FHR47	594	Open in IMG/M
3300027682\|Ga0209971_1073742	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. FHR47	829	Open in IMG/M
3300027819\|Ga0209514_10064044	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2410	Open in IMG/M
3300027848\|Ga0209390_10231508	Not Available	1546	Open in IMG/M
3300027876\|Ga0209974_10025409	All Organisms → cellular organisms → Bacteria	1960	Open in IMG/M
3300027894\|Ga0209068_10001682	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	10996	Open in IMG/M
3300028787\|Ga0307323_10356892	Not Available	524	Open in IMG/M
3300029990\|Ga0311336_10651504	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. FHR47	901	Open in IMG/M
3300030000\|Ga0311337_10639780	All Organisms → cellular organisms → Bacteria → Proteobacteria	917	Open in IMG/M
3300030339\|Ga0311360_10696312	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. FHR47	810	Open in IMG/M
3300031241\|Ga0265325_10000004	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	347347	Open in IMG/M
3300031241\|Ga0265325_10000049	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	80854	Open in IMG/M
3300031247\|Ga0265340_10261152	Not Available	771	Open in IMG/M
3300032770\|Ga0335085_10527479	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. FHR47	1342	Open in IMG/M
3300032770\|Ga0335085_11550512	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. FHR47	688	Open in IMG/M
3300032783\|Ga0335079_10640395	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. FHR47	1117	Open in IMG/M
3300032896\|Ga0335075_10598302	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1092	Open in IMG/M
3300033004\|Ga0335084_10442473	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. FHR47	1337	Open in IMG/M
3300033158\|Ga0335077_12009929	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. FHR47	537	Open in IMG/M
3300033433\|Ga0326726_10002292	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	17626	Open in IMG/M
3300033433\|Ga0326726_10008516	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	9110	Open in IMG/M
3300033433\|Ga0326726_12000296	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. FHR47	564	Open in IMG/M
3300033486\|Ga0316624_11089893	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. FHR47	723	Open in IMG/M
3300033513\|Ga0316628_101648290	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. FHR47	854	Open in IMG/M
3300033513\|Ga0316628_102629813	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. FHR47	663	Open in IMG/M
3300033887\|Ga0334790_101991	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. FHR47	929	Open in IMG/M
3300034090\|Ga0326723_0005827	All Organisms → cellular organisms → Bacteria → Proteobacteria	4687	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	69.16%
Host-Associated	Host-Associated	27.10%
Engineered	Engineered	3.74%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	52.34%
Plants	Host-Associated → Plants	27.10%
Aquatic	Environmental → Aquatic	16.82%
Wastewater	Engineered → Wastewater	1.87%
Biotransformation	Engineered → Biotransformation	1.87%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	43.93%
Rhizoplane	Host-Associated → Plants → Rhizoplane	17.76%
Rhizosphere	Host-Associated → Plants → Rhizosphere	9.35%
Marine	Environmental → Aquatic → Marine	8.41%
Peat	Environmental → Terrestrial → Peat	8.41%
Sediment	Environmental → Aquatic → Sediment	4.67%
Freshwater	Environmental → Aquatic → Freshwater	3.74%
Industrial Wastewater	Engineered → Wastewater → Industrial Wastewater	1.87%
Microbial Solubilization Of Coal	Engineered → Biotransformation → Microbial Solubilization Of Coal	1.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	25.23%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	14.95%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	9.35%
Wetlands	Environmental → Aquatic → Marine → Wetlands	8.41%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	8.41%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	8.41%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.61%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.67%
Loam	Environmental → Terrestrial → Soil → Loam	3.74%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.74%
Ice	Environmental → Aquatic → Freshwater → Ice	1.87%
Petrochemical	Engineered → Wastewater → Industrial Wastewater → Petrochemical	1.87%
Unclassified	Engineered → Biotransformation → Microbial Solubilization Of Coal → Unclassified	1.87%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.93%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	14.95%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	14.95%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	9.35%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	8.41%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	8.41%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	8.41%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.61%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.67%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.67%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.74%
Glacial Lake	Environmental → Aquatic → Freshwater → Ice → Glacial Lake	1.87%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.87%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.87%
Unclassified	Engineered → Wastewater → Industrial Wastewater → Petrochemical → Unclassified	1.87%
Unclassified	Engineered → Biotransformation → Microbial Solubilization Of Coal → Unclassified → Unclassified	1.87%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.93%
Contaminated	Environmental → Aquatic → Freshwater → Groundwater → Contaminated	0.93%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.93%

Habitat	Taxonomy	Distribution
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	9.35%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	8.41%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	8.41%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.61%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	4.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.67%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	4.67%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.74%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	3.74%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	3.74%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.80%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	2.80%
Freshwater	Environmental → Aquatic → Freshwater → Ice → Glacial Lake → Freshwater	1.87%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.87%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	1.87%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.87%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.87%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	1.87%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	1.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.87%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	1.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.87%
Hydrocarbon Resource Environments	Engineered → Wastewater → Industrial Wastewater → Petrochemical → Unclassified → Hydrocarbon Resource Environments	1.87%
Hydrocarbon Resource Environments	Engineered → Biotransformation → Microbial Solubilization Of Coal → Unclassified → Unclassified → Hydrocarbon Resource Environments	1.87%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.93%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater	0.93%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.93%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.93%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.93%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	0.93%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.93%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2067725004	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000953	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300001605	Tailings pond microbial communities from Northern Alberta - Syncrude Mildred Lake Settling Basin	Engineered	Open in IMG/M
3300002856	Wastewater microbial communities from Syncrude, Ft. McMurray, Alberta - Tailing Pond Surface TP_surface	Engineered	Open in IMG/M
3300003994	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqA_D2	Environmental	Open in IMG/M
3300003995	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleA_D2	Environmental	Open in IMG/M
3300004006	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragA_D2	Environmental	Open in IMG/M
3300004009	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D2	Environmental	Open in IMG/M
3300004062	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqA_D2	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005183	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D1	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005511	Combined assembly of arab plate scrape MF_Col (Combined Assembly)	Host-Associated	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300007519	Freshwater microbial communities from Lake Bonney liftoff mats and glacier meltwater in Antarctica - BON-03	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011419	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT357_2	Environmental	Open in IMG/M
3300012493	Unplanted soil (control) microbial communities from North Carolina - M.Soil.10.yng.090610	Environmental	Open in IMG/M
3300012501	Unplanted soil (control) microbial communities from North Carolina - M.Soil.4.yng.170610	Environmental	Open in IMG/M
3300012914	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300014158	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaG	Environmental	Open in IMG/M
3300014318	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqA_D1_rd	Environmental	Open in IMG/M
3300014320	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqA_D1	Environmental	Open in IMG/M
3300014324	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleA_D1	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017944	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_10_20_MG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300018029	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP06_20_MG	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300022881	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P1 20-24	Environmental	Open in IMG/M
3300025297	Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes)	Host-Associated	Open in IMG/M
3300025551	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqA_D2 (SPAdes)	Environmental	Open in IMG/M
3300025580	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D1 (SPAdes)	Environmental	Open in IMG/M
3300025891	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost154B-one (SPAdes)	Environmental	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025955	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleA_D2 (SPAdes)	Environmental	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026013	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleC_D1 (SPAdes)	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027364	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co AM (SPAdes)	Host-Associated	Open in IMG/M
3300027617	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 S AM (SPAdes)	Host-Associated	Open in IMG/M
3300027682	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes)	Host-Associated	Open in IMG/M
3300027819	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW37 contaminated, 5.8 m (SPAdes)	Environmental	Open in IMG/M
3300027848	Freshwater microbial communities from Lake Bonney liftoff mats and glacier meltwater in Antarctica - BON-01 (SPAdes)	Environmental	Open in IMG/M
3300027876	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300029990	I_Fen_N2 coassembly	Environmental	Open in IMG/M
3300030000	I_Fen_N3 coassembly	Environmental	Open in IMG/M
3300030339	III_Bog_N1 coassembly	Environmental	Open in IMG/M
3300031241	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG	Host-Associated	Open in IMG/M
3300031247	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG	Host-Associated	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033486	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_A	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M
3300033887	Peat soil microbial communities from Stordalen Mire, Sweden - 713 P-1-X1	Environmental	Open in IMG/M
3300034090	Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00N	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPKC_07285160	2067725004	Soil	MRRIIQANIDRLKVLLKTEPIRQSGAMEARLLAEEELKQKQLPAYDKKETKAFN
ICCgaii200_08591653	2228664021	Soil	MRWIIQANIDKLKELLKTETNPAKRAMEASLLAEEELKQEHLPSYDRKEAKAY
F14TC_1056560821	3300000559	Soil	LKTETDPTKRAMEAHLLAEEELKQKHLPAYDKKEPKAF*
JGI11643J11755_117569542	3300000787	Soil	MGVDMRRIVQANIDRLNKLLETETDPTKRTMERRLLVEEKTNLKKLPAYNKNEAKAY*
JGI11643J11755_117646562	3300000787	Soil	MRWIIQANIDKLKELLKTETNPAKRAMEASLLAEEELKQEHLPSYDRKEAKAY*
JGI11615J12901_105974301	3300000953	Soil	RIIQANIDRLKVLLKTETDPTKRAMEARLLAEEELKQKQLPAYDKKETKAF*
F14TB_1015272571	3300001431	Soil	MRRIIQANIDRLKELLKTETDPTKRAMEAHLLAEEELKQKHLPAYDKKEPKAF*
Draft_100237633	3300001605	Hydrocarbon Resource Environments	MRRIIQANIDRLKTLLAQETDPTKRAMELRLLAEEEAKQKGLAPYDKTEPKAF*
Draft_101913411	3300001605	Hydrocarbon Resource Environments	MRRIIQANIDRLKTLLAEETDPTKRTMELRLLAEEEAKQKELAPYDKKEPKAF*
draft_112075991	3300002856	Hydrocarbon Resource Environments	MRRIIQANIDRLKTLLAEETDPTKRTMELRLLAEEEAKQKELAPYDKKEPKAF*LTALDP
draft_115166755	3300002856	Hydrocarbon Resource Environments	MRRIIQANIDRLKVLLAQETDPTKRAMELRLLAEEEAKLKRLPPYDRKEPKAF*
Ga0055435_100259292	3300003994	Natural And Restored Wetlands	MRRIIQANIDRLKELLKTETDPTKRAMEARLLAEEELKQKQLPAYDKKETKAY*
Ga0055438_100843361	3300003995	Natural And Restored Wetlands	MRRIIQANVDRLKELLETETDPTKRAMETRLLAEEELKQKQLPAYDKKETKAY*
Ga0055453_102654722	3300004006	Natural And Restored Wetlands	MAGWEFRMRRIIQANIDRLKELLKTETDPTKRAMETRLLSEEEAKLNQLPPYNKNETKAY
Ga0055437_100148654	3300004009	Natural And Restored Wetlands	MRRIIQANIDRFKELLKTETNPTKRAMEARLLAEEELKQKHLPAYDKKETKAF*
Ga0055500_101503802	3300004062	Natural And Restored Wetlands	EFDMRRIIQANIDRFKELLKTETDPTKRAMEARLLAEEELKQKHLPAYDKKETKAF*
Ga0062590_1014120322	3300004157	Soil	MRRIIQANIDRLKELLKTETDPTKRAMEARLLAEEELKQKHLPAYDKKETKAF*
Ga0063356_1013760562	3300004463	Arabidopsis Thaliana Rhizosphere	MSISPLEVVIMRRIIEANINRFKELLKTETDPTKRTIEMRLLAEEEAKLKELSVPGKNEPKAF*
Ga0062595_1019520041	3300004479	Soil	MRRIVQANIDRLNKLLETETDPTKRTMEIRLLAEEKAKQKKLPAYNKNEAKAY*
Ga0062591_1001903781	3300004643	Soil	MRRIIQANIDRLKELLKTETDPTKRAMEARLLAEEELKQKNLPAYDKKEIKAF*
Ga0062591_1026666441	3300004643	Soil	MRRIIQANIDRLKELLKTETDPTKRAMEARLLAEEELKQKHLPAYD
Ga0062594_1026691281	3300005093	Soil	RIIQANIDRFRDLLKTETDATKRTMEMRLLAEEEAKMKQLPAYDKKEPQAY*
Ga0068993_101515383	3300005183	Natural And Restored Wetlands	MRRIIQANIDRFKELLKTETDPTKRAMEARLLAEEELKQKHLPAYDKKETKAF*
Ga0070670_1018921641	3300005331	Switchgrass Rhizosphere	MRRIVQANIDRLNKLLETETDPTKRTMEIRLLAEEKAKQKKLPAYNKNEAK
Ga0070713_1016508402	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MSMRRIIQANIDRLKELLKTERDPTKRAMERRLLAEEEAKLKQPPAYDKKETKAF*
Ga0077121_102270911	3300005511	Arabidopsis Rhizosphere	MRRIIQANIDRFRDLLKTETDATKRAMEVRLLAEEEAKLEQLPAYDKKEPQAY*
Ga0070741_103895763	3300005529	Surface Soil	MRRIIQANIDRFKDLLKTETDATKQTMEKRLLAEEEVKLKHLPAHDEKEPQAY*
Ga0070730_105435402	3300005537	Surface Soil	MRSIIQANIDRFKELLKAEADATKRAMELRLLVEEEAKLKKLPADKKNEPRAY*
Ga0075023_1000144242	3300006041	Watersheds	MRRIIQANIDRLKELLKTEPDPTKRVMERRLLAEEEAKLKQLPAYDKQEPKAY*
Ga0075024_1007542563	3300006047	Watersheds	IQANIDRLKELLKTETDPTKRAMERRLLAEEEAKKNQLSAYDKKETKAY*
Ga0075014_1005697702	3300006174	Watersheds	MRRIIQANIDRLKELLKRETDPTKRAMERRLLAEEEAKKNQLSAYDKKETKAY*
Ga0105055_100476756	3300007519	Freshwater	MRRIIQANVDRLKELLKTETNPTKRAMETRLLAEEGAKLKQLPAYEKNEIRAY*
Ga0111539_101350883	3300009094	Populus Rhizosphere	MRRIVQANIDRLNKLLETETDPTRRTMERRLLAEEKAKRKKLPAYNKNEAKAY*
Ga0134125_111289742	3300010371	Terrestrial Soil	MGFAVRRIIQANIDRFKDLLKTETDATKRTMEKRLLAEEEEKLKQLPAYDKKESQAY*
Ga0134125_127508311	3300010371	Terrestrial Soil	MRRIIRANIDRLKELLKTETDPTKRAMEVRLLIEEELKEKQLSAYDKKQTKAY*
Ga0136449_1030872241	3300010379	Peatlands Soil	MRRIIQANIDKLQELLKTETDPTKRIMERRLLAEEEAKQKHLPAYDKNETKAY*
Ga0134126_1002067612	3300010396	Terrestrial Soil	MRSIIQANIDRFKEFLKAEANPTKRAMELRLLAEEETKLKQLPAYKKNEPRAY*
Ga0134126_101111193	3300010396	Terrestrial Soil	MRRIIRANIDRLKELLKTESDPTKRAMEARLLIEEELKEKQLPADDKKQSKAY*
Ga0134127_105826852	3300010399	Terrestrial Soil	MGFAMRRIIQANIDRFKDLLKTETDATKRTMEKRLLAEEEEKLKQLPAYDKKE
Ga0105246_119163761	3300011119	Miscanthus Rhizosphere	MRRIIQANIDRFRDLLKTETDATKRTMEMRLLAEEEAKMKQLPAYDKKEPQAY*
Ga0137446_10249832	3300011419	Soil	MRRIIQANIDRLKLLLETETDPTKRAMEIRLLAEDEAKLKLMPKFEKNEPKAF*
Ga0157355_10386382	3300012493	Unplanted Soil	MRRIIQANIDRLKELLKTETDPTKRAMEARLLAEEELKQKHLPAYDKKERKAF*
Ga0157351_10379552	3300012501	Unplanted Soil	LDFSDHKAHAFSKRKFEMRRIIQANIDRLKELLKTETDATKRAMEMHLLAEEELKQKRLPAYYKNEPKAY*
Ga0157297_103997941	3300012914	Soil	ANIDRLKELLKTETDPTKRAMEARLLAEEELKQKHLPAYDKKETKAF*
Ga0164306_119174911	3300012988	Soil	FTMRRIIQANIDRFRDLLKTETDATKRTMEMRLLAEEEAKMKQLPAYDKKEPRAY*
Ga0181521_105791791	3300014158	Bog	MRRIIQANIDKLKELLKTETDPTKRIMERRLLAEEEAKQKHLPAYDKNETKAY*
Ga0075351_11002371	3300014318	Natural And Restored Wetlands	LKTETDPTKRAMEARLLAEEELKQKHLPAYDKKETKAY*
Ga0075342_12023591	3300014320	Natural And Restored Wetlands	MRRIIQTNIDRFKELLKTETDPTKRAMEARLLAEEELKQKHLPAYDKKETKAF*
Ga0075352_10491761	3300014324	Natural And Restored Wetlands	ECTCCGGPWEFDMRRIIQANIDRLKELLKTETDPTKRAMEARLLAEEELKQKQLPAYDKKETKAY*
Ga0157379_119664422	3300014968	Switchgrass Rhizosphere	MHRIIQANIDRFKDLLKTEADPTKQTMEMRLLAEEEARLKQLDASDKKEPKAF*
Ga0132258_100857234	3300015371	Arabidopsis Rhizosphere	MRRIIQANIDRLKKLLETETDPTKRAMETRLLAEEEAKQKQLRAYDKNETKAF*
Ga0132258_110076271	3300015371	Arabidopsis Rhizosphere	ANIDRFIELLSTETDATKRTMEKRLLAEEEAKLKQLLAYDKKERQAY*
Ga0132258_115773231	3300015371	Arabidopsis Rhizosphere	RGWEINLRRIIQANIDRFKELLKSETDSAKRKMEERLLAAEELKLKQLPPYDKNEPKAY*
Ga0132258_122936151	3300015371	Arabidopsis Rhizosphere	LRRIIQANIDKFKGLLKTETDPTKRAMEERLLAEEELKLKEMPPYNKNETKAY*
Ga0132258_135299441	3300015371	Arabidopsis Rhizosphere	MRRIIQANIDRFIELLSTETDATKRTMEKRLLAEEEAKLKQLPAYDKKE
Ga0132256_1006611482	3300015372	Arabidopsis Rhizosphere	MRRIIQANIDRFIELLSTETDATKRTMEKRLLAEEEAKLKQLPAHDNKEPKAY*
Ga0132255_1004597212	3300015374	Arabidopsis Rhizosphere	MPLDIAALEAQPASTLRREREFDLRRIIQANIDRFKKLLETETDPTKRAMERRLLVEEKAKQKQLPPYDKNETKAY*
Ga0132255_1004812891	3300015374	Arabidopsis Rhizosphere	KRKFEMRRIIQANIDRLKELLKTETDATKRAMEMHLLAEEELKQKRLPAYYKNEPKAY*
Ga0132255_1016613932	3300015374	Arabidopsis Rhizosphere	MRRIIQANIDRFIELLSTETDATKRTMEKRLLAEEEAKLKQLPAYDKKERQAY*
Ga0132255_1048200922	3300015374	Arabidopsis Rhizosphere	CSTLRREREFDLRRIIQANIDRFKKLLETETDPTKRAMESRLLAEEEAKQEQLPPYDKNETKAY*
Ga0132255_1056341291	3300015374	Arabidopsis Rhizosphere	NIDRLKELLKTETDPTKRALETRLLAEEEAKKKDLPPYDKNEKKAY*
Ga0187786_105132392	3300017944	Tropical Peatland	MCKGGDPEFDMRRIIQANIDRLKTLLETEADPTKRAMETRLLNEEELKLKQLLADPKNETKAY
Ga0187776_112168882	3300017966	Tropical Peatland	MCKGGDPEFDMRRIIQANIDRLKTLLETEADPTKRAMETRLLKEEEFKLKQLLADPKNETKAY
Ga0187787_101652392	3300018029	Tropical Peatland	MFNGGDPEFDMRRIIQANIDRLKTLLETEADPTKRAMETRLLNEEELKLKQLLADPKNETKAY
Ga0190274_115233711	3300018476	Soil	MRSIIQANIDRFKDLLKTETDATKQAMEKRLLAAEEAKLKQLLANDKKEPQAY
Ga0190271_101994841	3300018481	Soil	MLEMRRIIQANINRFKDLLKTETDATKQAMEKRLLAAEEAKLKQLLANDKKEPQAY
Ga0190271_120688161	3300018481	Soil	MRRIIQANIDRFEELLKTESNPTKRAMELRLLAEEKAKLEKLPPYDKNEAKAY
Ga0224545_10302553	3300022881	Soil	MRRIIQANIDRLKELLKAESDPTKRIMERRLLAEEEAKQKHLPAYDKNETKAY
Ga0209758_11521962	3300025297	Arabidopsis Rhizosphere	MRRIIQANIDRFRDLLKTETDATKRAMEVRLLAEEEAKLEQLPAYDKKEPQAY
Ga0210131_10406171	3300025551	Natural And Restored Wetlands	MRRIIQANIDRLKELLKTETDPTKRAMEARLLAEEELKQKQLPAYDKKETKAY
Ga0210138_10147672	3300025580	Natural And Restored Wetlands	MRRIIQTNIDRFKELLKTETDPTKRAMEARLLAEEELKQKHLPAYDKKETKAF
Ga0209585_103257161	3300025891	Arctic Peat Soil	EWEFDVRRIIQANIDRLKELLKSETDTTKRAMEMGLLAEEEAKMNQLLQYNKKETKAY
Ga0207710_104630692	3300025900	Switchgrass Rhizosphere	DWVMWQGWEINLRRIIQANIDRFKELLKSETDPAKRKMEARLLAAEELKLEQLPPYDKNETKAY
Ga0207700_117235622	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MSMRRIIQANIDRLKELLKTERDPTKRAMERRLLAEEEAKLKQPPAYDKKETKAF
Ga0210071_10226202	3300025955	Natural And Restored Wetlands	MRRIIQANIDRFKELLKTETDPTKRAMEARLLAEEELKQKHLPAYDKKETKAF
Ga0207658_104312122	3300025986	Switchgrass Rhizosphere	MRRIVQANIDRLNKLLETETDPTKRTMEIRLLAEEKAKQKKLPAYNKNEAKAY
Ga0208534_10187772	3300026013	Natural And Restored Wetlands	MRRIIQANIDRFKELLKTETNPTKRAMEARLLAEEELKQKHLPAYDKKETKAF
Ga0207641_116396471	3300026088	Switchgrass Rhizosphere	RIIQANIDRFKELLKSETDPAKRKMEARLLAAEELKLEQLPPYDKDETKAY
Ga0207641_119671662	3300026088	Switchgrass Rhizosphere	LRRIIQANIDRFKKLLETETDPTKRAMERRLLAEEKAKQKQLPPYDKNETKAY
Ga0209967_10585192	3300027364	Arabidopsis Thaliana Rhizosphere	MRRIVQANIDRLNKLLETETDPTKRTMERRLLVEEKANLKKLPAYNKNEAKAY
Ga0210002_10764092	3300027617	Arabidopsis Thaliana Rhizosphere	MRRIIQANIDRLKELLKTETDPTKRAMEARLLAEEELRQKNLPAYDRKEIKAF
Ga0209971_10737422	3300027682	Arabidopsis Thaliana Rhizosphere	MRRIIQANIDRLKELLKTETDPTKRAMEARLLAEEELKQKNLPAYDKKEIKAY
Ga0209514_100640444	3300027819	Groundwater	MRRIIQANIDRFEELLKTETDPTKRAMELRLLAEEKAKLERLPPFDKNEAKAY
Ga0209390_102315082	3300027848	Freshwater	MRRIIQANVDRLKELLKTETNPTKRAMETRLLAEEGAKLKQLPAYEKNEIRAY
Ga0209974_100254092	3300027876	Arabidopsis Thaliana Rhizosphere	MRWIIQANIDKLKELLKTETNPAKRAMEASLLAEEELKQEHLPTYDRKEAKAY
Ga0209068_100016823	3300027894	Watersheds	MRRIIQANIDRLKELLKTEPDPTKRVMERRLLAEEEAKLKQLPAYDKQEPKAY
Ga0307323_103568922	3300028787	Soil	RIIQANIDRFRDLLKTETDATKRIMEMRLLAEEEAKLKQLPAYDKKEPQSFLN
Ga0311336_106515041	3300029990	Fen	MRRIIQANIDRFKELLQTETDPTKRVMELRLLAEEEDKQKKLPPYDAKEPKAF
Ga0311337_106397803	3300030000	Fen	MRRIIQANIDRFEEMLKTEADPTKRAMEMRLLAEEKAKLKMLPPFHKDEVKAY
Ga0311360_106963121	3300030339	Bog	MRRIIQANIDRFKELLQTETDPTKRVMELRLLAEEEDKQKKLPPYNAKEPKAF
Ga0265325_10000004153	3300031241	Rhizosphere	MRRIIQANIDRLKELLKTEPDPTKHVMERRLLAEEEAKLKQLPAYDKKEPKAY
Ga0265325_1000004939	3300031241	Rhizosphere	MVLFMLRQEWEFDLRRIIQANIDRLKELLKTELEPTKRAMERRLLAEEEAKLKQLPAYDKKETRAY
Ga0265340_102611521	3300031247	Rhizosphere	PAAAREKALPVRTIIQANIDRFKELLKMETDPTKRAMEMRLLAEEEAKQKQLFAFDRKEA
Ga0335085_105274794	3300032770	Soil	MRRIIQANIDRLKQLLKTETDPTKRAMEARLLAEEELKQKHLPAYDKNETKAF
Ga0335085_115505122	3300032770	Soil	VSLLRRDWEFDLRRIIQANIDRLKGLLKTETDPTKRAMEARLLAEEELKLKQLPAYDKNETKAC
Ga0335079_106403951	3300032783	Soil	MRGIIQANIARFKELLKTETDPTKRAMEKRLLAEEEAKEKHLPVDATKETKAY
Ga0335075_105983022	3300032896	Soil	MRRIIQANIDRFRDLLKIETDETKRTMEMRLLAEEEAKLKKLPAKGKNVPKALSS
Ga0335084_104424733	3300033004	Soil	VSLLRRDWEFDLRRIIQANIDRLKGLLKTETDPTKRAMEARLLAEEELKLKQLPAYDKNETKAY
Ga0335077_120099292	3300033158	Soil	VSLLRRDWEFDLRRIIQANIDRLKGLLKTETDPTKRAMEERLLAEEELKLKEMPPYNKKETKAY
Ga0326726_1000229214	3300033433	Peat Soil	MLRREWEFDLRRIIQANIDRLKELLKTETDPTKRAMERRLLAEEEAKQKQLPAYDKNETKAY
Ga0326726_100085167	3300033433	Peat Soil	MRRIIQANIDRLKELLKTETDPTKRAMEMRLLAEEEMKQKRLPAYDRNEPKAY
Ga0326726_120002961	3300033433	Peat Soil	DSCDHNGAHFYRERKFDMRRIIQANIDRLKELLKTETDPTKRAMEVQLLAEEELKRKQLVAYGNEPKAY
Ga0316624_110898931	3300033486	Soil	MRRIIQANIDRLKELLKTETDPTKRTMERRLLAEEEAKQKQLPAYDKNETKAY
Ga0316628_1016482901	3300033513	Soil	MRRIIQANIDRLKALLKTETDPTKRAMEARLLAEEELKQKHLPAYDKEETKAY
Ga0316628_1026298132	3300033513	Soil	MRRIIQANIDRLKELLKTETDPTKRAMEARLLAEEELKQKHLPAYDKKETKAY
Ga0334790_101991_515_676	3300033887	Soil	MRRIIQANIDRLKELLKAESDPTKRIMERRLLAEEEAKEKHLPAYDKNETKAY
Ga0326723_0005827_4065_4253	3300034090	Peat Soil	MGRRERKFDMRRIIQANIDRLKELLKTETDPTKRAMEMRLLAEEEMKQKRLPAYDRNEPKAY

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F092520

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences