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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |
| Basic Information | |
|---|---|
| Family ID | F092519 |
| Family Type | Metagenome / Metatranscriptome |
| Number of Sequences | 107 |
| Average Sequence Length | 47 residues |
| Representative Sequence | MMMNKVVASLRKEYSRLEKEMGQVGKALDALGHAGGKKLKKTGRTLSK |
| Number of Associated Samples | 98 |
| Number of Associated Scaffolds | 107 |
| Quality Assessment | |
|---|---|
| Transcriptomic Evidence | Yes |
| Most common taxonomic group | Unclassified |
| % of genes with valid RBS motifs | 100.00 % |
| % of genes near scaffold ends (potentially truncated) | 0.93 % |
| % of genes from short scaffolds (< 2000 bps) | 0.93 % |
| Associated GOLD sequencing projects | 95 |
| AlphaFold2 3D model prediction | Yes |
| 3D model pTM-score | 0.50 |
| Hidden Markov Model |
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| Powered by Skylign |
| Most Common Taxonomy | |
|---|---|
| Group | Unclassified (100.000 % of family members) |
| NCBI Taxonomy ID | N/A |
| Taxonomy | N/A |
| Most Common Ecosystem | |
|---|---|
| GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (11.215 % of family members) |
| Environment Ontology (ENVO) | Unclassified (28.037 % of family members) |
| Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Soil (non-saline) (54.206 % of family members) |
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| Predicted Topology & Secondary Structure | |||||
|---|---|---|---|---|---|
| Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 52.63% β-sheet: 0.00% Coil/Unstructured: 47.37% | Feature Viewer |
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| Powered by Feature Viewer | |||||
| Structure Viewer | |
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| Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.50 |
| Powered by PDBe Molstar | |
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| Pfam ID | Name | % Frequency in 107 Family Scaffolds |
|---|---|---|
| PF01425 | Amidase | 63.55 |
| PF01061 | ABC2_membrane | 1.87 |
| PF13539 | Peptidase_M15_4 | 1.87 |
| PF02557 | VanY | 0.93 |
| PF01979 | Amidohydro_1 | 0.93 |
| PF11645 | PDDEXK_5 | 0.93 |
| COG ID | Name | Functional Category | % Frequency in 107 Family Scaffolds |
|---|---|---|---|
| COG0154 | Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase | Translation, ribosomal structure and biogenesis [J] | 63.55 |
| COG1876 | LD-carboxypeptidase LdcB, LAS superfamily | Cell wall/membrane/envelope biogenesis [M] | 0.93 |
| COG2173 | D-alanyl-D-alanine dipeptidase | Cell wall/membrane/envelope biogenesis [M] | 0.93 |
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| Name | Rank | Taxonomy | Distribution |
| Unclassified | root | N/A | 100.00 % |
| Visualization |
|---|
| Powered by ApexCharts |
| Scaffold | Taxonomy | Length | IMG/M Link |
|---|---|---|---|
| 3300021420|Ga0210394_10181978 | Not Available | 1830 | Open in IMG/M |
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| Habitat | Taxonomy | Distribution |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 11.21% |
| Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil | 10.28% |
| Peatland | Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland | 7.48% |
| Hardwood Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil | 6.54% |
| Peatland | Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland | 5.61% |
| Palsa | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa | 5.61% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 4.67% |
| Vadose Zone Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil | 4.67% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 4.67% |
| Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil | 3.74% |
| Bog Forest Soil | Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil | 2.80% |
| Bog | Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog | 2.80% |
| Surface Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil | 2.80% |
| Peatlands Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil | 2.80% |
| Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil | 2.80% |
| Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 2.80% |
| Bog | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog | 2.80% |
| Watersheds | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds | 1.87% |
| Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil | 1.87% |
| Freshwater Sediment | Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment | 0.93% |
| Iron-Sulfur Acid Spring | Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring | 0.93% |
| Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil | 0.93% |
| Untreated Peat Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil | 0.93% |
| Tropical Peatland | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland | 0.93% |
| Bog | Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog | 0.93% |
| Soil | Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil | 0.93% |
| Permafrost | Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost | 0.93% |
| Plant Litter | Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter | 0.93% |
| Roots | Host-Associated → Plants → Roots → Unclassified → Unclassified → Roots | 0.93% |
| Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere | 0.93% |
| Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere | 0.93% |
| Attine Ant Fungus Gardens | Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens | 0.93% |
| Visualization |
|---|
| Powered by ApexCharts |
| Taxon OID | Sample Name | Habitat Type | IMG/M Link |
|---|---|---|---|
| 3300002245 | Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027) | Environmental | Open in IMG/M |
| 3300002914 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm | Environmental | Open in IMG/M |
| 3300002917 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm | Environmental | Open in IMG/M |
| 3300004082 | Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3 | Environmental | Open in IMG/M |
| 3300004152 | Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3 | Environmental | Open in IMG/M |
| 3300005436 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG | Environmental | Open in IMG/M |
| 3300005445 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG | Environmental | Open in IMG/M |
| 3300005537 | Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 | Environmental | Open in IMG/M |
| 3300005586 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 | Environmental | Open in IMG/M |
| 3300005591 | Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 | Environmental | Open in IMG/M |
| 3300005598 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 | Environmental | Open in IMG/M |
| 3300005602 | Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 | Environmental | Open in IMG/M |
| 3300005610 | Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 | Environmental | Open in IMG/M |
| 3300005921 | Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 | Environmental | Open in IMG/M |
| 3300006028 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG | Environmental | Open in IMG/M |
| 3300006050 | Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014 | Environmental | Open in IMG/M |
| 3300006174 | Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014 | Environmental | Open in IMG/M |
| 3300006794 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 | Environmental | Open in IMG/M |
| 3300006797 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108 | Environmental | Open in IMG/M |
| 3300007982 | Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaG | Environmental | Open in IMG/M |
| 3300009623 | Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10 | Environmental | Open in IMG/M |
| 3300009646 | Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_150 | Environmental | Open in IMG/M |
| 3300009665 | Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10 | Environmental | Open in IMG/M |
| 3300009764 | Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40 | Environmental | Open in IMG/M |
| 3300009824 | Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG | Environmental | Open in IMG/M |
| 3300010379 | Sb_50d combined assembly | Environmental | Open in IMG/M |
| 3300011271 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG | Environmental | Open in IMG/M |
| 3300011411 | Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ017 MetaG | Host-Associated | Open in IMG/M |
| 3300012201 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG | Environmental | Open in IMG/M |
| 3300012209 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG | Environmental | Open in IMG/M |
| 3300012930 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
| 3300014168 | Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG | Environmental | Open in IMG/M |
| 3300014200 | Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG | Environmental | Open in IMG/M |
| 3300014501 | Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly) | Environmental | Open in IMG/M |
| 3300014657 | Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG | Environmental | Open in IMG/M |
| 3300014838 | Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly) | Environmental | Open in IMG/M |
| 3300017935 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40 | Environmental | Open in IMG/M |
| 3300017940 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100 | Environmental | Open in IMG/M |
| 3300017975 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG | Environmental | Open in IMG/M |
| 3300018006 | Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4 | Environmental | Open in IMG/M |
| 3300018008 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_40 | Environmental | Open in IMG/M |
| 3300018024 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_100 | Environmental | Open in IMG/M |
| 3300018040 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150 | Environmental | Open in IMG/M |
| 3300018047 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10 | Environmental | Open in IMG/M |
| 3300020579 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M | Environmental | Open in IMG/M |
| 3300020583 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M | Environmental | Open in IMG/M |
| 3300021180 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O | Environmental | Open in IMG/M |
| 3300021420 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M | Environmental | Open in IMG/M |
| 3300021433 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O | Environmental | Open in IMG/M |
| 3300021474 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O | Environmental | Open in IMG/M |
| 3300021479 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M | Environmental | Open in IMG/M |
| 3300022726 | Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
| 3300022734 | Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU3 | Host-Associated | Open in IMG/M |
| 3300023019 | Soil microbial communities from Bohemian Forest, Czech Republic ? CSU1 | Environmental | Open in IMG/M |
| 3300023030 | Soil microbial communities from Bohemian Forest, Czech Republic ? CSU2 | Environmental | Open in IMG/M |
| 3300024220 | Spruce litter microbial communities from Bohemian Forest, Czech Republic ? CLU5 | Environmental | Open in IMG/M |
| 3300025432 | Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_40 (SPAdes) | Environmental | Open in IMG/M |
| 3300025472 | Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_100 (SPAdes) | Environmental | Open in IMG/M |
| 3300026215 | Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-048 (SPAdes) | Environmental | Open in IMG/M |
| 3300026325 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes) | Environmental | Open in IMG/M |
| 3300027030 | Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF041 (SPAdes) | Environmental | Open in IMG/M |
| 3300027376 | Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_M1 (SPAdes) | Environmental | Open in IMG/M |
| 3300027439 | Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M1 (SPAdes) | Environmental | Open in IMG/M |
| 3300027512 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes) | Environmental | Open in IMG/M |
| 3300027535 | Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M2 (SPAdes) | Environmental | Open in IMG/M |
| 3300027545 | Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O3 (SPAdes) | Environmental | Open in IMG/M |
| 3300027567 | Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O2 (SPAdes) | Environmental | Open in IMG/M |
| 3300027633 | Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M1 (SPAdes) | Environmental | Open in IMG/M |
| 3300027652 | Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O2 (SPAdes) | Environmental | Open in IMG/M |
| 3300027667 | Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M2 (SPAdes) | Environmental | Open in IMG/M |
| 3300027684 | Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M2 (SPAdes) | Environmental | Open in IMG/M |
| 3300027737 | Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3 (SPAdes) | Environmental | Open in IMG/M |
| 3300027842 | Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes) | Environmental | Open in IMG/M |
| 3300027854 | Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes) | Environmental | Open in IMG/M |
| 3300027986 | Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes) | Environmental | Open in IMG/M |
| 3300028036 | Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE2 | Host-Associated | Open in IMG/M |
| 3300028775 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_2 | Environmental | Open in IMG/M |
| 3300028860 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N2_3 | Environmental | Open in IMG/M |
| 3300028871 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_1 | Environmental | Open in IMG/M |
| 3300029917 | I_Bog_E1 coassembly | Environmental | Open in IMG/M |
| 3300029953 | II_Bog_E3 coassembly | Environmental | Open in IMG/M |
| 3300030053 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_2 | Environmental | Open in IMG/M |
| 3300030054 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_1 | Environmental | Open in IMG/M |
| 3300030399 | II_Palsa_E2 coassembly | Environmental | Open in IMG/M |
| 3300030520 | III_Palsa_N2 coassembly | Environmental | Open in IMG/M |
| 3300030991 | Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1A (Eukaryote Community Metatranscriptome) | Environmental | Open in IMG/M |
| 3300031474 | Fir Coassembly Site 11 - Champenoux / Amance forest | Environmental | Open in IMG/M |
| 3300031708 | FICUS49499 Metagenome Czech Republic combined assembly | Environmental | Open in IMG/M |
| 3300031715 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05 | Environmental | Open in IMG/M |
| 3300031753 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515 | Environmental | Open in IMG/M |
| 3300031823 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05 | Environmental | Open in IMG/M |
| 3300031962 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515 | Environmental | Open in IMG/M |
| 3300032174 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05 | Environmental | Open in IMG/M |
| 3300032205 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05 | Environmental | Open in IMG/M |
| 3300032805 | Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2 | Environmental | Open in IMG/M |
| 3300032828 | Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4 | Environmental | Open in IMG/M |
| 3300033547 | Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE1 | Host-Associated | Open in IMG/M |
| 3300034199 | Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_01D_14 | Environmental | Open in IMG/M |
| Geographical Distribution | |
|---|---|
| Zoom: | Powered by OpenStreetMap |
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| Protein ID | Sample Taxon ID | Habitat | Sequence |
| JGIcombinedJ26739_1013994071 | 3300002245 | Forest Soil | MTNLNKVVSSLQNEYSRLEKEIGRVGKALDALGHAGGKKLKKTGRTLSKEARKRIADA |
| JGI25617J43924_101071212 | 3300002914 | Grasslands Soil | MLDKVVGSLQKEYSRLEKEMGQVSKALGALGYASGKKLKKTGRTLSKDARRRIAEA |
| JGI25616J43925_103547201 | 3300002917 | Grasslands Soil | MMMNKVVASLRKEYSRLEREMGQVGKALDALGHAGGKKLKSTG |
| Ga0062384_1001984931 | 3300004082 | Bog Forest Soil | MMNKVVVSLRKEYSRLEREMGQVGKALDALGHAGGKRLKKTGRTLSKDARRRIAEA |
| Ga0062386_1003849082 | 3300004152 | Bog Forest Soil | MMINKVVASLRKEYARLEKEMGQVGKALDALGHAGGKTLKKTGRTLSKDARRRIAEAQK |
| Ga0070713_1004328631 | 3300005436 | Corn, Switchgrass And Miscanthus Rhizosphere | MTNLNKVVTSLRNEYARLEKEMGRVGKALDALGQAGGKKLKRTTRTLSKEARKRIA |
| Ga0070708_1000362791 | 3300005445 | Corn, Switchgrass And Miscanthus Rhizosphere | MTNLNKVVASLRNEYSRLEKEIGRVGKALDALGHAGGKTLKRTGRTLSKEARKRI |
| Ga0070730_110546251 | 3300005537 | Surface Soil | MMNQVVASLQKEYSRLQSEIERVGKALDALGHSGGKKKFRAT |
| Ga0066691_101030871 | 3300005586 | Soil | MTTLNKVVASLQKEYSRLESEMGRVGKALNALGRAGGKKLKKTGRTLSKEARQRIAEAQ |
| Ga0070761_105927051 | 3300005591 | Soil | MTNLNKVVSSLRNEYSRLEREMGRVGKALDALGHA |
| Ga0066706_106092631 | 3300005598 | Soil | MTNLNKVVSSLRSEYSRLEKEMGRVGKALDALGHASGKTLKKTGRTLSKDARRRIA* |
| Ga0070762_106143862 | 3300005602 | Soil | MIINKVVASLQKEYSRLEKEMGQVGKALDALGHAGGKKLKKTGRTL |
| Ga0070763_103724831 | 3300005610 | Soil | MTNLKKVVSSLRYEYSRLEKEMGRVGKALDALGQAG |
| Ga0070766_102089672 | 3300005921 | Soil | MMMNKVVASLRKEYSRLEKEIGQVGKALDALGHAGGKKLKKTGRTLSKDAR |
| Ga0070717_114666202 | 3300006028 | Corn, Switchgrass And Miscanthus Rhizosphere | MINLNKVVKSLRNEYSRLEKEMGRVGKALDALGHAGGKS |
| Ga0075028_1002106003 | 3300006050 | Watersheds | MTNLNKVVSSLHNEYSRLEKEMGKVGKALEALGQAGGKKLKRTGRT |
| Ga0075014_1006553922 | 3300006174 | Watersheds | MTNLNKVVSSLRNEYSRLEKEMGRVGKALEALGHAGGKRLKKTGRTLSKEAR |
| Ga0066658_106501182 | 3300006794 | Soil | MTTLNKVVASLQKEYSRLESEMGRVGKALNALGRAGGKKLKKTGRTLSKE |
| Ga0066659_107980252 | 3300006797 | Soil | MTNLNKVVSSLRSEYSRLEKEMGRVGKALDALGHAGGKSLKKT |
| Ga0102924_14055052 | 3300007982 | Iron-Sulfur Acid Spring | MMMNKVVASLQKEYSRLQKEIGQVGKALDALGHSGGKKLKMTGRTLSKEARR |
| Ga0116133_10888732 | 3300009623 | Peatland | MTNLKKVVSSLQYEYFRLEKEMGRVGKALDALGQAGGKKLKK |
| Ga0116132_10326801 | 3300009646 | Peatland | MILDKVVLSLQKEYSRLEQEMGKVGKALDALGHASGKKLK |
| Ga0116135_13628742 | 3300009665 | Peatland | MMMNKVVASLQKEYSRLEKEIGQVGKALDALGHAGGKKLK |
| Ga0116135_13887492 | 3300009665 | Peatland | MMINKVVASLRKEYSRLEKEMGQVGKALDALGHAGGKKLKKTG |
| Ga0116134_11746422 | 3300009764 | Peatland | MMMNKVVASLQKEYSRLEREMGQVGKALDALGHAGG |
| Ga0116134_12413172 | 3300009764 | Peatland | MMMNKVVASLQKEYSRLEKEMGQVGKALNALGHSGGKKL |
| Ga0116219_104803212 | 3300009824 | Peatlands Soil | MTTLNKVVTSLQKEYSRLEKEMGRVGKALDALGKAGGKRLKKTGRTLSKEAR |
| Ga0136449_1025171072 | 3300010379 | Peatlands Soil | MTNLNKVVTSLRNEYARLEKEMGRVGKALDALGQAGGK |
| Ga0137393_100915143 | 3300011271 | Vadose Zone Soil | MMKNKVVACLRKEYSRFERGMGQEGKALDALGHAGGKK |
| Ga0153933_10536471 | 3300011411 | Attine Ant Fungus Gardens | MMNKVVSSLQREYSRLEKEMGKVGKALDALGHAGGRKLKKTGRTLSKDARRRIAEAQR |
| Ga0137365_111369402 | 3300012201 | Vadose Zone Soil | MINLNKVVSSLRNEYSRLEKEMGRVGKALDALGHSSGKALRKTRRTLSKDARRR |
| Ga0137379_111721242 | 3300012209 | Vadose Zone Soil | MTNLKKVVASLRNEYSRLEKEMGRVGKALDALGHAGGKTLKRT |
| Ga0137407_106992961 | 3300012930 | Vadose Zone Soil | MTNLNKVVSSLQNEYSRLEKEIGRVGKALDALGQAGGKKLKRTGRTLSKEARKRIADAQR |
| Ga0181534_106237142 | 3300014168 | Bog | MMMNKVVASLRKEYSRLEKEMGKVGKALDALGHAGGKKLKTTGRTLSK |
| Ga0181526_101703631 | 3300014200 | Bog | KKEYPRLEKELGQIGRALEALGHASGKKLKTSGRTLSKDARRRIADAKSRLATSA* |
| Ga0182024_125781802 | 3300014501 | Permafrost | MMITKVVASLRKEYSRLEKEIGQVGKALDALGHAGGKKLTKTG |
| Ga0181522_107634642 | 3300014657 | Bog | MTNLKKVVSSLQYEYSRLEKEMGRVGKALDALGQAGGKKLKKTGRTLSKEARKRIA |
| Ga0182030_116998642 | 3300014838 | Bog | MMMNKVVASLQKEYSRLEKEIGQVGKALDALGHAGGKKLKK |
| Ga0187848_102724212 | 3300017935 | Peatland | MMMNKVVASLQKEYSRLEKEMGQVGKALDALGHAGGRKLKKT |
| Ga0187853_102966481 | 3300017940 | Peatland | MMMNKVVASLQKEYSRLEKEMGQVGKALDALGHAGGRKLKKTGRTLSKDARRRIAE |
| Ga0187782_108324452 | 3300017975 | Tropical Peatland | MTNLNKVVSSLRVEYSRLEREMQRVGKALDALGHAG |
| Ga0187804_104185922 | 3300018006 | Freshwater Sediment | MMINKVVASLQKEYSRLEKEIGQVGKALDALGHAGGRKLKRTGRTLSKDAR |
| Ga0187888_10749852 | 3300018008 | Peatland | MILDKVVLSLQKEYSRLEQEMGKVGKALDALGHASGKKLKKTGRTLSKDA |
| Ga0187881_102765072 | 3300018024 | Peatland | MMDKVVSSLRKEYSRLELEMGRVRKALDALGHSGTSKLKKTGRTMS |
| Ga0187862_108283611 | 3300018040 | Peatland | MTNLNKVVSSLQNEYSRLEKEMGRVVKALDALGHAGGKKLKKTGRTLSKEARKR |
| Ga0187859_100983453 | 3300018047 | Peatland | MTNLNKVVSSLQNEYSRLEKEMGRVGKALDALGHAG |
| Ga0210407_110023982 | 3300020579 | Soil | MMMNKVVASLRKEYSRLEKELGRVGKALDALGHAGGSKLKRTGRTLSADARKRIADAQ |
| Ga0210407_113227961 | 3300020579 | Soil | MTNLNKVVTSLRNEYARLEKEMGRVGKALDALGQAGGKKLKRTGRTLS |
| Ga0210401_103501082 | 3300020583 | Soil | MINKVVASLRKEYSRLEKEMGQVGKALDALGHAGGKKLKKTGRTLSKDARRRIAQ |
| Ga0210396_109173052 | 3300021180 | Soil | MMMNQVVVSLRKEYSRLQAEMGRVGKALDALGHSGGKSLKMTGRTLSKDARRRIAEEQKL |
| Ga0210394_101819781 | 3300021420 | Soil | MMNKVVASLRKEYSRLEREMSQVGKALDALGHVGGKKLKRTGRTLSADARKRIAEAQKLR |
| Ga0210394_108379931 | 3300021420 | Soil | MMNKVVASLRKEYSRLEKEMGQVGKALDALGHASGK |
| Ga0210391_106109901 | 3300021433 | Soil | MINLNQVVKSLRNEYSRLEKEMGRVGKALDALGHAGGKSLKTTGRTLSKEARKRIADAQ |
| Ga0210391_111038772 | 3300021433 | Soil | MTNLNKVVTSLRNEYARLEKEMGRVGKALDALGQA |
| Ga0210390_110989602 | 3300021474 | Soil | MMMNKVVASLQKEYSRLQKEIGQVGKALDALGHSG |
| Ga0210410_115992541 | 3300021479 | Soil | MILGKVVVSLQKEYSRLEKEMGQVGKALDALGHAGGKKLKKT |
| Ga0242654_101301472 | 3300022726 | Soil | MMMNKVVASLRKEYSRLEKEMGKVGKALDALGHAGGKKLKSTGRTLS |
| Ga0224571_1130681 | 3300022734 | Rhizosphere | MMNKVVVSLRKEYSRLEREMGKVGKALDALGHAGGKKLKTTGRTLSKDARRR |
| Ga0224560_1100892 | 3300023019 | Soil | MMNKVVASLQKEYTRLEKEMGQVGKALDALGHSSGKRLKLTGRTLSKDARRRIAE |
| Ga0224561_10168032 | 3300023030 | Soil | MMNKVVASLRQEYSRLEKELGQVGKALDALGHAGGKKLKATGRTLSKDARRRIAEA |
| Ga0224568_10156111 | 3300024220 | Plant Litter | MINLKKVVSSLQNEYSRLEKEMGRVGKALDALGQAGGKKLK |
| Ga0208821_10280521 | 3300025432 | Peatland | MIMNKVVASLQKEYSRLEREMGQVGKALDALGHAGG |
| Ga0208692_11016372 | 3300025472 | Peatland | MIMNKVVASLQKEYSRLEREMGQVGKALDALGHAGGKKLKKTGRTLSKDARRRIAEAQKL |
| Ga0209849_10509841 | 3300026215 | Soil | MTQLNKVVASLSKEYSRLQKEMGRVGQALDALGHAGKKQLKTTGRTLSKEARNKI |
| Ga0209152_103737882 | 3300026325 | Soil | MTTLNKVVASLQKEYSRLESEMGRVGKALNALGRAGGKKLKKTGRTLSK |
| Ga0208240_10310502 | 3300027030 | Forest Soil | MTNLNKVVSSLQLEYSRLEREMGRVGKALDALGHA |
| Ga0209004_10204851 | 3300027376 | Forest Soil | MMNKVVASLQKEYSRLEKEMGQVGKALDALGHASGRKLKRAGRTLS |
| Ga0209332_10572271 | 3300027439 | Forest Soil | MTNLNKVVSSLRSEYSRLEKEMGRVGKALDALGHAGGKSLKRTGR |
| Ga0209179_11091392 | 3300027512 | Vadose Zone Soil | MTMLDKVVGSLQKEYSRLEKEMGQVSKALGALGHAGGKKLKKTGRTLSKDARRRIA |
| Ga0209734_11058141 | 3300027535 | Forest Soil | MTNLNKVVSSLRTEYSRLEKEMGRVGKALDALGHAGGKTLKKTGRTLSKEARKRI |
| Ga0209008_11133721 | 3300027545 | Forest Soil | MNLNNVVVSLRNEYSRLENEMGRVRKALDALGHAGGK |
| Ga0209115_10473061 | 3300027567 | Forest Soil | MTNLNKVVSSLRFEYSRLEKEMERVGKALNALGHANGAKLKNSGRTLSKEAR |
| Ga0208988_10230162 | 3300027633 | Forest Soil | MTMLDKVVGSLQKEYSRLEKEMGQVSKALGALGHAGGKKLKKTGRTLSKDAR |
| Ga0209007_11091611 | 3300027652 | Forest Soil | MIINKVVASLQKEYSRLEKEMGQVGKALDALGHAGGKKLKKTGRTLSK |
| Ga0209009_10199161 | 3300027667 | Forest Soil | MTNLNKVVSSLRSEYSRLEKEMGRVGKALDALGHAGGKSLKRTGRTL |
| Ga0209626_10337382 | 3300027684 | Forest Soil | MMMNKVVASLRKEYSRLEKEMGQVGKALDALGHAGGKKLKS |
| Ga0209038_101069691 | 3300027737 | Bog Forest Soil | MMINKVVTSLRKEYSRLEKEMGQVGKALDALGHAGGKKLK |
| Ga0209580_105180901 | 3300027842 | Surface Soil | MVNLNKVVSSLRSEYSRLEKEMGRVGKALDALGHAGGK |
| Ga0209517_103603371 | 3300027854 | Peatlands Soil | MTTLNKVVSSLRKEYSRLESEIGKVGKALDALGQAGGKKLKKTGRTLSKEARRR |
| Ga0209168_100942323 | 3300027986 | Surface Soil | MTNLNKVVTSLRNEYARLEKEMGRVGKALDALGQAGGKKLKRTGRTLSKEAR |
| Ga0265355_10171721 | 3300028036 | Rhizosphere | MMNKVVASLQKEYTRLEKEMGQVGKALDALGHSSGKRLKLTGRTLSK |
| Ga0302231_100622242 | 3300028775 | Palsa | MMMNKVVASLQKEYSRLEKEIGQVGKALDALGHAGGKKLKKTGRTLSKDARRRIAEA |
| Ga0302199_12780131 | 3300028860 | Bog | MMMNKVVTSLQQEYSRLEKEMGRVGKALDALGHAGGKKF |
| Ga0302230_102758732 | 3300028871 | Palsa | MIMNKVVASLRKEYSRLEKEMGQVGKALDALGHAG |
| Ga0311326_102110981 | 3300029917 | Bog | MMMTKVVASLQKEYARLEKEMGRVGKALDALGHAG |
| Ga0311343_110919631 | 3300029953 | Bog | MMMNKVVASLQKEYSRLEKEIGKVGKALDALGHAGGKKLKKTGR |
| Ga0302177_107113481 | 3300030053 | Palsa | MMMNKVVVSLRKEYSRLEKEMGQVGKALDALGHAGGK |
| Ga0302182_100962401 | 3300030054 | Palsa | MMMNKVVVSLRKEYSRLEKEMGQVGKALDALGHAGGKKLKTTGRTLSKDARRRIAEAQKL |
| Ga0311353_102398801 | 3300030399 | Palsa | MTTINKVVASLHEEYSRLQKEMGQVRSALDALGHTNGNRIKGIRRTL |
| Ga0311372_118427261 | 3300030520 | Palsa | MMMNKVVVSLRKEYSRLEKEMGQVGKALDALGHAGGKKLKTTGRTLSKDARR |
| Ga0073994_119111011 | 3300030991 | Soil | MTMLDKVVGSLQKEYSRLEKEMGQVSKALGALGHA |
| Ga0170818_1029468531 | 3300031474 | Forest Soil | MINLNKVVKSLRNEYSRLEKEMGRVGKALDALGHAGGKLLKTTGRTLSKEARKRIADA |
| Ga0310686_1096742471 | 3300031708 | Soil | MMNKVVVSLRKEYSRLEREMGQVGKALDALGHAGGRKLKKTGRTLSKD |
| Ga0310686_1146418451 | 3300031708 | Soil | MMINKVVASLQKEYSRLEKEMGQVGKALDALGHAGAKKFKKTGRTLSKDARR |
| Ga0310686_1158344151 | 3300031708 | Soil | MMMNKVVASLRKEYSRLEKEMGKVGKALDALGHAGGKKLKSTGRTLSKDAR |
| Ga0307476_108272272 | 3300031715 | Hardwood Forest Soil | MNLNNVVASLRNEYSRLEKEMGRVGKALDALGHAGGKTLKGTGRILSKDARRRIAEAQ |
| Ga0307476_111486671 | 3300031715 | Hardwood Forest Soil | MMINKVVASLRKEYSRLEKEMGQVGKALDALGHAGGKKLKKTGRTLSKDARRRIAQAQ |
| Ga0307477_110693972 | 3300031753 | Hardwood Forest Soil | MMMNKVVASLRKEYSRLEKEMGQVGKALDALGHAGGKKLKKTGRTLSK |
| Ga0307478_106121842 | 3300031823 | Hardwood Forest Soil | MMMNKVVASLQEEYARLEKEMGRVGKALDALGHAGGKK |
| Ga0307479_116281092 | 3300031962 | Hardwood Forest Soil | MANLNTVVASLRVEYSRLEKEMERVGKALAALGHANGNKLRKVKRTLSKEARN |
| Ga0307470_103502971 | 3300032174 | Hardwood Forest Soil | MMNKVVTSLRKEYSRLEKEMGKVGKALDALGHAGGKKLKSTGRTLSKDAR |
| Ga0307472_1010273261 | 3300032205 | Hardwood Forest Soil | MMMNKVVVSLRREYSRLEKEMGQVGKALDALGQAGGKKLKRTGRTLSKD |
| Ga0335078_109548222 | 3300032805 | Soil | MTTMNKVVTSLQKEYSRLEREMGRVGKALDALGRN |
| Ga0335078_116623861 | 3300032805 | Soil | MTNLNKVVTSLQNEYARLEKEMGRVGKALDALGHAGGKKLKKTGRILSKEARKRIADAQ |
| Ga0335080_101787743 | 3300032828 | Soil | MTNLNKVVASLQNEYARLQKEAGRVGKALDALGVAGGKKLKGTTRTLSK |
| Ga0316212_10359091 | 3300033547 | Roots | MTTLNKVVASLHEEYSRLEKEMGQVRSALDALGHANGNR |
| Ga0370514_201643_387_518 | 3300034199 | Untreated Peat Soil | MVNLNKVVKSLRNEYSRLEKEMGRVGKALDALGHAGGKSLKTTG |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |