Metagenome / Metatranscriptome Family F092510

Overview

Basic Information

• Family ID: F092510
• Family Type: Metagenome / Metatranscriptome
• Number of Sequences: 107
• Average Sequence Length: 61 residues
• Representative Sequence: MIRVRYRDSNELSPGLHAAAERHGRTTTVYLLSGLTNPQRRSALRRLRLSARMGHCP
• Number of Associated Samples: 97
• Number of Associated Scaffolds: 107

Quality Assessment

• Transcriptomic Evidence: Yes
• Most common taxonomic group: Unclassified
• % of genes with valid RBS motifs: 20.00 %
• % of genes near scaffold ends (potentially truncated): 4.67 %
• % of genes from short scaffolds (< 2000 bps): 4.67 %
• Associated GOLD sequencing projects: 92
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.48

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Unclassified (100.000 % of family members)
• NCBI Taxonomy ID: N/A
• Taxonomy: N/A

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa (13.084 % of family members)
• Environment Ontology (ENVO): Unclassified (20.561 % of family members)
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Soil (non-saline) (42.991 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 22.35%
  β-sheet: 22.35%
  Coil/Unstructured: 55.29%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF00795	CN_hydrolase	7.48
PF03734	YkuD	1.87
PF03551	PadR	0.93

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	1.87
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	1.87
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	0.93
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.93
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.93

Phylogeny

NCBI Taxonomy

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

Associated Scaffolds

Scaffold	Taxonomy	Length
3300005921|Ga0070766_11153470	Not Available	536
3300017822|Ga0187802_10249577	Not Available	687
3300018034|Ga0187863_10648411	Not Available	595
3300031236|Ga0302324_103329773	Not Available	525
3300034163|Ga0370515_0392755	Not Available	585

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.39%
Host-Associated	Host-Associated	5.61%

Class

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	77.57%
Aquatic	Environmental → Aquatic	16.82%
Plants	Host-Associated → Plants	5.61%

Category

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	64.49%
Freshwater	Environmental → Aquatic → Freshwater	15.89%
Peat	Environmental → Terrestrial → Peat	13.08%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.87%
Roots	Host-Associated → Plants → Roots	1.87%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.87%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.93%

Type

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	44.86%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	15.89%
Loam	Environmental → Terrestrial → Soil → Loam	13.08%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	13.08%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.54%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.87%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.87%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.87%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.93%

Subtype

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	27.10%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	13.08%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.28%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	8.41%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	7.48%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	6.54%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.61%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.67%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.80%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.80%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.87%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.87%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.87%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.87%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.87%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.93%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.93%

Habitat

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	13.08%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	13.08%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	9.35%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	7.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.48%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	6.54%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	3.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.74%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.80%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.80%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.80%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.87%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.87%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.87%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.87%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	1.87%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.93%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.93%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.93%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.93%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.93%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.93%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.93%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.93%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.93%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.93%

Associated Samples

Taxon OID	Sample Name	Habitat Type
3300005162	Soil and rhizosphere microbial communities from Laval, Canada - mgLAB	Environmental
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental
3300009628	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_10	Environmental
3300009665	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10	Environmental
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental
3300010876	Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental
3300018012	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_5	Environmental
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental
3300018046	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10	Environmental
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental
3300025509	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 shallow-072012 (SPAdes)	Environmental
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental
3300027110	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF001 (SPAdes)	Environmental
3300027523	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA (SPAdes)	Environmental
3300027641	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG (SPAdes)	Environmental
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental
3300028747	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_2	Environmental
3300028773	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_2	Environmental
3300028877	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_3	Environmental
3300029944	II_Palsa_E1 coassembly	Environmental
3300029951	III_Palsa_N1 coassembly	Environmental
3300030043	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_1	Environmental
3300030053	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_2	Environmental
3300030580	II_Palsa_N1 coassembly	Environmental
3300031027	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_3	Environmental
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental
3300034163	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14	Environmental

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066814_100097481	3300005162	Soil	MIRVRYRDSNELSPGLHAAAERHGRTTTVYLLSGLTNPQRRSALRRLRLSARMGHCP
Ga0066671_103971321	3300005184	Soil	MIRVRYRDSNEFSPGLHAAAERHGRITTVYLLPGLTKPERRSALRRLRLSARM
Ga0070709_115277251	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MIRVRYRDSNELSPGLHAAAEQRGRGTTVYLLSGLTAAERRSALRR
Ga0070714_1005931381	3300005435	Agricultural Soil	MIRVRYQGSNELSPGLHATAEREGRRTTVYLLDGMTVAQRRSALRRLRLTARMGHCPRLPAAQLAFALFTDRIRTGIGRA
Ga0070713_1011071041	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MIRVRYQGSNELSPGLHATAEREGRRTTVYLLDGMTVAQRRSALRRLRLTARMGHCPRLPAAQLAFALFTDRIRTGIGR
Ga0070711_1005439721	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MIKIRYRHANELPPGLHATAERHGRTITVYLLPSLTAEQRNAALRRLRLSGRMGHGPRLP
Ga0070711_1008775861	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MIRVRYRGSNELSPGLHATAERDGRRTTVYLLDGMTAVQRR
Ga0066687_103796651	3300005454	Soil	LLGWAMIKVRYRDSNEPSPGLHAAAERHGRTTMVYLLSGLTNPQRRSALRRLRLSARMGHCPGLPAGQ
Ga0070698_1016738281	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	LLLGWAMIRVRYRDSNALSPGLHAAAERHGRTTTVFLLSGLTKPQRRSALRRLRLSARMGHCPG
Ga0070697_1015117331	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MIKIRYRHANELPPGLHATAERHGRTITVYLLPSLTAEQRNAALRRLRLSGRM
Ga0070730_109922521	3300005537	Surface Soil	MIRVRYQGSNELSPGLHATAEREGRRTTVYLLDGMTVAQRRSALRRLRLTARMGHCPRLPAAQLAFALFTDRIRTGIGRAGA
Ga0066705_102698691	3300005569	Soil	MIRVRYRDSNEFSPGLHAAAERHGRITTVCLLPGLTKPERRSALR
Ga0068864_1022139602	3300005618	Switchgrass Rhizosphere	MIRVRYRGSNELSPGLHATAERDGRRTTVYLLDGMTAVQRRSAPRRLQLTARMGHCPRLPAAQLAFALFTDRIRTG
Ga0070766_111534701	3300005921	Soil	MIKIRYRDSNELSPGLHAAAERHGRSTTVYLLSGLTAQERRAALRRLRLSAR
Ga0066790_105349492	3300005995	Soil	MIRIRYRNSNELSPGLHVTAERRGHRTTVYLLAGITSEERRSALRRLRLTARMGHCPRLPAGQLAFALFTDRIRTGVGRV
Ga0070712_1000430027	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MIKIRYRHANELPPGLHATAERHGRTITVYLLPSLTAEQRNAALRRLRLSGRMGHGPRLPGVQLAFALFADRIRTSIGQAGSVFRKHP
Ga0070765_1020514702	3300006176	Soil	LGYAMIKIRYCDSNELSPGLHAAAERHGRSTTVYLL
Ga0097621_1009959282	3300006237	Miscanthus Rhizosphere	MIRVRYRGSNELSPGLHATAERDGRRTTVYLLDGMTAGHRRSALRRLRLTARMGHCPRLPAAQLAIALFTDRIRTGIGRAGRARKAAASA*
Ga0066665_103897742	3300006796	Soil	MIRVRYRDSNEFSPGLHAAAERHGRTTMVYLLTGLTKPERRSALRRLRLSAPMGHCPRLPSGQLALALFADRIRTGIGRAG
Ga0079220_103534141	3300006806	Agricultural Soil	MIRVRYRGSDELSPGLHATAERDGRRTTVYLIDGMTAGQRRSALRRLRLTARMGQCPRLPAVQLAFALTTSR
Ga0075425_1003921582	3300006854	Populus Rhizosphere	MIRVRYRGSNELSPGLHATAERDGRRTTVYLLDGMTAVQRRSAPRRLQLTARMGHCPRLPAAQLAFALFT
Ga0073928_108013862	3300006893	Iron-Sulfur Acid Spring	LGCAVIRIRYRAANELAPGLHAAAERHGRNTTVYLLSGL
Ga0116221_11344132	3300009523	Peatlands Soil	VIKIRYRDADELSPGLHAAAVRQGRTTIVFLLPGLTAAERRAALRRLRLSARMGY
Ga0116125_11494752	3300009628	Peatland	MIKIRYVDPNKISPGLHAAVECHGRSTTVYLLCGLRPQQRRAAFRRLQMSARMGYCPAL
Ga0116135_12169191	3300009665	Peatland	MIKIRYVDPNKISPGLHAAVECHGRTTTVYLLCGLRPQQRRAAFRRLRMSARTGYCPALPAPQLAFARLADRIRTGLGQAGAV
Ga0134128_128556111	3300010373	Terrestrial Soil	MIKIRYRHANELPPGLHATAERHGRTITVYLLPSLTAEQRNAALRRLRLSGRMGHGPRLPGVQ
Ga0134126_107049161	3300010396	Terrestrial Soil	MIRVRYRGSNELSPGLHATAERAGRRTTVYLLDGMTAVKRRSALRRLRLTARMGHCP
Ga0126361_101898012	3300010876	Boreal Forest Soil	MIKIRYRDPNEFSPGLHAAAVRHGHGTTVYLRSGLTVPERRAALRRLRVSARMGHCPRLPVGQLVLALIA
Ga0126350_109227112	3300010880	Boreal Forest Soil	MIKIRYRDPNELSPGLHAEAERRGRCTTVYLLSGLTKQERRAALRRLRLSARMGYCPSLPAPQLALALFKDRIRTGAWQTGAVV
Ga0137392_106839972	3300011269	Vadose Zone Soil	MIKIRYRHSNELSPGLHAAAERHGRSTTVYLPSGLTAQERRAALRRLRLSARMGYC
Ga0137391_108583631	3300011270	Vadose Zone Soil	MIRIRYRGPNELSPGLHAEAERGRRGTTVYLLSGLTAQQRRSA
Ga0137393_113868182	3300011271	Vadose Zone Soil	MIRVRYRDSNEFSPGLHAAAERHGRITTVYLLPGLTKPE
Ga0137365_101473201	3300012201	Vadose Zone Soil	MIRVRYRDSNELSPGLHAAAERHGRTTTVYLLSGLTKPQRRSALRRLRLSARMGHCPGLP
Ga0137374_105114981	3300012204	Vadose Zone Soil	MIRVRYRDSNELSPGLHAAAERHGRTTTVYLLSGLTKPQRQSV
Ga0137381_105451542	3300012207	Vadose Zone Soil	MIRVRYRDSNEFSPGLHAAAERHGRTTVVYLLTGLTKPERRSALRRLRLSARMGHCPRLPSGQLALALFADRIRTGIGRA
Ga0137381_112546281	3300012207	Vadose Zone Soil	MIRVRYRDSNELSPGLHAAAERHGRTTTVYLLSGLTKPQRRSALRRLRLSARMGHCPGLPAGRLALALFADRIRTG
Ga0137378_111933082	3300012210	Vadose Zone Soil	MIRIRYRDSNEFSPGLHAAAERHGRTTTVYLLSGLTAAERESALRRLRLSARMGHCPRLPGVQLALALLADRIRTAIGRAG
Ga0137377_106422381	3300012211	Vadose Zone Soil	MIKIRYRNANELPPGLHATAERHGRTITIYLLPGLAAEERNAALRRLRLSGRMGHGPRLPGVQL
Ga0137370_102496492	3300012285	Vadose Zone Soil	MIRVRYRGSNELSPGLHATAERDGRRTTVYLLDGMTVVQRRSALRRLRLSARMGHCPRLPAWQLAVALFADRIRTGVG
Ga0137387_107267871	3300012349	Vadose Zone Soil	MIKIRYRNANELPPGLHATAERHGRTITIYLLPGLAAEERNAALRRLRLSGRMGHGPRLPGVQLGVAMFA
Ga0137416_107893282	3300012927	Vadose Zone Soil	MIRVRYRDSNELSPGLHAAAERHGRTTTVYLLSGLTKPQRRSALRRLRLSARMGHCPGLPAGRLALALFA
Ga0137404_106203262	3300012929	Vadose Zone Soil	MIRVRYQGPNELSPGLHATAERDGRRTTVYLLDGMTVTQR
Ga0137407_101333511	3300012930	Vadose Zone Soil	MIRVRYRDSNELSPGLHAAAERHGRTTTVFLLSGLTKPQRRSALRRLRLSARMGHCPGL
Ga0164305_102719412	3300012989	Soil	MIRVRYRDSNEFSPGLHAAAERHGRITTVYLLPGLTKPERRSALRRLRLSARMG
Ga0157372_133301831	3300013307	Corn Rhizosphere	MIRVRYRGSNELSPGLHATAERDGRRTTVYLLDSMTAVQRRSALRRLRLTARMGHCPRLPAAQLAFAL
Ga0163163_126225081	3300014325	Switchgrass Rhizosphere	MIRVRYRGSNELSPGLHATAERDGRRTTVYLLDGMTAVQRRSALRRLRLTARMGHCPRLPAAQLAFALFTDRIRTGIGRAGR
Ga0182024_121603151	3300014501	Permafrost	MGYAMIKIRYRDPNELSPGLHAAAECHGRGTTVYLLAGLTAAQRRSALRRLRLSARMGYCPPLPAPQLGLALLADRIRISV
Ga0187802_100589342	3300017822	Freshwater Sediment	VIKIRYRDADELSPGLHAAAVPHGRNTIVFLLPGLTAAERRAALRRL
Ga0187802_102495771	3300017822	Freshwater Sediment	VIKIRYRDADELSPGLHAAAVPQGRSTIVFLLPGLTAAERRAALRRLRLSARMGYCPPLPRAQLALALMADRIRTTVGQL
Ga0187820_13301011	3300017924	Freshwater Sediment	MTMIKIRYRDQNELSPGLHAAAERHGRAITVYLLSGLSATQRRAALRRLRISARR
Ga0187807_10757473	3300017926	Freshwater Sediment	VIKIRYRDADELSPGLHAAAVPQGRSTIVFLLPGLTAAE
Ga0187847_101177191	3300017948	Peatland	MIKIRYVDPNKISPGLHAAVECHGRSTTVYLLCGLRPQQRRAAFRRLQMSARMGYCPALPAPQLA
Ga0187817_108408832	3300017955	Freshwater Sediment	MTMIKIRYRDQNELSPGLHAAAERHGRAITVYLLSGLSATQRRAALRRLRISARRGYSPRLPAPQL
Ga0187783_105716342	3300017970	Tropical Peatland	MIKIRYRDADELSPGLHAAAVRQGRNTIVFLLPGLSSAQRRAALRRLRLSARMGYCPPLPAAQLALALVADRIRT
Ga0187783_114095841	3300017970	Tropical Peatland	MIKIRYCDPGELSPGLHAEAERRGRRTTVYLVSGLTKRQRRSALRRLRMSARRGYAPRLPAGKMAVALFADRIRTGLGQA
Ga0187781_107795202	3300017972	Tropical Peatland	VIKIRYRDADELSPGLHAAAVNHGRDTTVYLLPGLTTAERRAALRRLRLS
Ga0187815_102036162	3300018001	Freshwater Sediment	VIKIRYRDADELSPGLHAAAVPQGRNTIVFLLPGLTAAERRAALRRLRLSARMGYCPPLPRAQLAL
Ga0187810_103322782	3300018012	Freshwater Sediment	VIKIRYRDADELSPGLHAAAVPQGRSTIVFLLPGLTAAERRAALRRLRLSARMGYCPPLPRAQLAL
Ga0187863_106484111	3300018034	Peatland	MIRVRYLGSNELSPGLHATAERRGRRTTVFLLDGMTVAERRSALRRLRLTARMGHCPRLPAGQLGFALFTDQIRTGIRRAGAV
Ga0187875_102602682	3300018035	Peatland	MIKIRYRDQNELSPGLHAAAECQGRGTTVYLLCGLTTAQRRSALRRLRLSARTGHSPRLPAVQLVLALCADRVGTGVARA
Ga0187883_102718102	3300018037	Peatland	MIKIRYVDPNKISPGLHAAVECHGRSTTVYLLCGLRPQQRRAAFRRLRMSARTGYCPALPAPQLA
Ga0187855_106915092	3300018038	Peatland	MIKIRYVDPNKISPGLHAAVECHGRSTTVYLLCGLRPQQRRAAFRR
Ga0187887_105008642	3300018043	Peatland	MIKIRYVDPNKISPGLHAAVECHGRSTTVYLLCGLRPQQRRAAFR
Ga0187887_108238091	3300018043	Peatland	MIKIRYRDPNEFSPGLHAAAVRHGRGTTVYLLSGLTVPERRAALRRLRVSARMGHCPRLPAGRLVLALVADRI
Ga0187851_103221011	3300018046	Peatland	MIKIRYVDPNKISPGLHAAVECHGRSTTVYLLCGLRPQQRRAAFRRLQLSARMGYCPA
Ga0066667_109276092	3300018433	Grasslands Soil	MIRVRYRDSNEFSPGLHAAAERHGRITTVYLLPGLTKPERRSALRRLRL
Ga0210395_109408782	3300020582	Soil	MIKIRYRDPNELSPGLHAAAERRGRSTTVYLLSGLSAAQRRAALRRLKISARRGYDP
Ga0210388_110460471	3300021181	Soil	MIKIRYVDPNKISPGLHAAVECHGRSTTVYLLCGLRP
Ga0210388_117352751	3300021181	Soil	VIRIRYRAANELAPGLHAAAERHGRHTTVYLLAGLTTAERRAALRRLRISA
Ga0210385_103037301	3300021402	Soil	VIRIRYRAANELAPGLHAAAERHGRHTTVYLLSGLTTAERRAALRRLRISARVGRNPRLP
Ga0210387_109046971	3300021405	Soil	MIKIRYRNANELPPGLHATAERHGRTITIYLLPGLAAEERNAALRRLRLSGRMGHGPRLPGVQ
Ga0210391_109253611	3300021433	Soil	MIKIRYRDPNELSPGLHAAAERRGRSTTVYLLSGLSAAQRRAALRRLKISARRGYDPKLPTPQLA
Ga0210398_101503771	3300021477	Soil	MIKIRYVDPNKISPGLHAAVECHGRSTTVYLLCGLRPQQRRAAF
Ga0208848_10463991	3300025509	Arctic Peat Soil	MIRIRYRGPNELSPGLHVTAERHGRTTTVYLLSGMTAAQRRSALRRLRLTARMGHCPRLPAGQLGFALFTDRIR
Ga0207692_110738301	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	VIRVRYRDSNEFSPGLHAAAERHGRITTVYLLPGLTKPERRSALRRLRLSARMG
Ga0207699_102266711	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MIRVRYRDSNEFSPGLHAAAERHGRITTVYLLPGLTKPERRSALRRLR
Ga0207700_117342172	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MIRVRYRGSNELSPGLHATAERAGRRTTVYLLDGMTAGQRRSALRRLRL
Ga0207702_100561121	3300026078	Corn Rhizosphere	MIRVRYRGSNELSPGLHATAERDGRRTTVYLLDGMTAGQRRSALRRLRLTARMGHCPRLPAAQLAFALFTDRIRT
Ga0209239_12942312	3300026310	Grasslands Soil	MIRVRYRDSNALSPGLHAAAERHGRTTTVFLLSGLTKPQRRSALRRLRLSARMGHCPGLPAGQLALAL
Ga0208488_10021213	3300027110	Forest Soil	MIKIRYVDPNKISPGLHAAVECHGRSTTVYLLCGLRPQQRRAAFRRLQMSARMGYCPALPAPQLVFARFK
Ga0208890_10118081	3300027523	Soil	MIRVRYRDSNELSPGLHAAAERHGRTTTVYLLSGLTKPQRRSALRRLRLSARMGHCPGLPAGRLALALF
Ga0208827_11413802	3300027641	Peatlands Soil	VIKIRYRDADELSPGLHAAAVRQGRTTIVFLLPGLTAAERRAALRRLRLSARMGYCPP
Ga0209073_103556611	3300027765	Agricultural Soil	MIRVRYRGSNELSPGLHATAERDGRRTTVYLLDGMTAVRRRSALRRLRLTARMGHCPRLPAAQLA
Ga0209074_101919482	3300027787	Agricultural Soil	MIRVRYRDSNEFSPGLHAAAERHGRITTVYLLPGLTKPERRS
Ga0209166_100873592	3300027857	Surface Soil	MIKIRYRDPNELSPGLHAAAERHGRNTTVYLLPGLSAAQRR
Ga0209166_103701091	3300027857	Surface Soil	MIRVRYQGSNELSPGLHATAEREGRRTTVYLLDGMTVAQRRSALRRLRLTARMGHCPRLPAAQLAFALFTDRIRTGIGRAGAVLRLH
Ga0209167_103161341	3300027867	Surface Soil	VIKIRYRDADELSPGLHAAAVPQGRNTIVFLLPGLTAAERRAALRRLRLSAR
Ga0302219_101956131	3300028747	Palsa	MIKIRYVDPNKISPGLHAAVECHGRSTTVYLLCGLRPQQRRAAFRRLRMSARMGYCPALPAPQLALARLADRIRTGLGQAG
Ga0302234_101591412	3300028773	Palsa	MIKIRYVDPNKISPGLHAAVECHGRSTTVYLLCGLRPQQRQAAFRRLRMSARMGYCPALPAPQLA
Ga0302235_100570782	3300028877	Palsa	MIKIRYVDPNKISPGLHAAVECHGRSTTVYLLCGL
Ga0302235_101381722	3300028877	Palsa	MGKAMIKIRYRDPHELSPGLHAHAERHGRRTTVYLL
Ga0311352_105300971	3300029944	Palsa	MIKIRYVDPNKISPGLHAAVECHGRSTTVYLLCGLRPQQRQAAFRRLRMSARMGYCPALPAPQLAFARFKDRIRT
Ga0311371_106336971	3300029951	Palsa	MIKIRYRDPNELSPGLHAEAERRGRCTTVYLLSGLTK
Ga0302306_102605351	3300030043	Palsa	MIKIRYVDPNKISPGLHAAVECHGRSTTVYLLCGLRPEQRRAAFRRLRMSARTGYCPALPAPQLALARFRDRIRTGLGQAGAVFRC
Ga0302177_100050496	3300030053	Palsa	MIKIRYVDPNKISPGLHAAVECHGRNTTVYLLCGLRPQERRAAFRRLRMSARMGNCPALPAPLLALAWLADRIRT
Ga0302177_104963311	3300030053	Palsa	MFIGRTFIGCAVIKVRYRDQNELSPGLHAAAERQGRYTTVYLLSGLNAAQRRAALRRLKISARRGYGPRLPAPQLALALLADR
Ga0311355_108547662	3300030580	Palsa	MIKIRYVDPNKISPGLHAAVECHGRTTTVYLLCGLRPQQRRA
Ga0302308_105913492	3300031027	Palsa	MIKIRYVDPNKISPGLHAAVECHGRSTTVYLLCGLRPEQRRAAFRRLRM
Ga0302325_102993581	3300031234	Palsa	MIKIRYVDPNKISPGLHAAVECHGRSTTVYLLCGLRPQQRQAAFRR
Ga0302325_110873452	3300031234	Palsa	MIKIRYVDPNKISPGLHAAVECYGRNTTVYLLCGLRPQERRAAFRRLRMSARM
Ga0302324_1033297732	3300031236	Palsa	MNWRVMIKIRYVDPNKISPGLHAAVECHGRSTTVYLLCGLRPQQRQAAFRRLRMSARMGYCPALPAPQL
Ga0310686_1096744281	3300031708	Soil	MIKIRYRDADELSPGLHAAAVPQGRSTIVFLLPGLTAAERRAALRRLRL
Ga0318527_101903152	3300031859	Soil	MIRIRYRGSNELSPGLHAEAERGRRGTTVYLLSGLTAQQR
Ga0311301_119519341	3300032160	Peatlands Soil	MIKIRYRDSNELSPGLHAAAECRGHNTTVYLLSGLTTQERRAALR
Ga0307471_1019395771	3300032180	Hardwood Forest Soil	MIRVRYRDSNEFSPGLHAAAERHGRITTVYLLPGLTKP
Ga0335078_115844191	3300032805	Soil	MIKIRYRNANELPPGLHATAERRGRAIIIYLLPGLAAEERGAALRRLRLSGRMG
Ga0370515_0392755_375_584	3300034163	Untreated Peat Soil	MIKIRYVDPNKISPGLHAAVECHGRNTTVYLLCGLRPPERRAAFRRLRMSARMGNCPALPTPQLALAWLA