Metagenome / Metatranscriptome Family F092502

Basic Information
Family ID	F092502
Family Type	Metagenome / Metatranscriptome
Number of Sequences	107
Average Sequence Length	51 residues
Representative Sequence	TEEEQVKLEKDLANVRDRQEGRPPSARKPANTAKKPPSDAENGQTAGAKPNP
Number of Associated Samples	100
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.93 %
% of genes near scaffold ends (potentially truncated)	87.85 %
% of genes from short scaffolds (< 2000 bps)	85.98 %
Associated GOLD sequencing projects	96
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.35

Most Common Taxonomy
Group	Unclassified (70.093 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (10.280 % of family members)
Environment Ontology (ENVO)	Unclassified (31.776 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (44.860 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 22.50% β-sheet: 0.00% Coil/Unstructured: 77.50%
Feature Viewer

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Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF00155	Aminotran_1_2	78.50
PF03447	NAD_binding_3	6.54
PF07167	PhaC_N	4.67
PF01368	DHH	1.87
PF03320	FBPase_glpX	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG3243	Poly-beta-hydroxybutyrate synthase	Lipid transport and metabolism [I]	4.67
COG1494	Fructose-1,6-bisphosphatase/sedoheptulose 1,7-bisphosphatase or related protein	Carbohydrate transport and metabolism [G]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.09 %
All Organisms	root	All Organisms	29.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.09 %
cellular organisms	root	All Organisms → cellular organisms	29.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.09 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	27.10 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	2.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.09 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	25.23 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	2.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.09 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	23.36 %
Metazoa	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa	2.80 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.09 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	22.43 %
Eumetazoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa	2.80 %
Chromatiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.09 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	5.61 %
Bilateria	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria	2.80 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	2.80 %
Chromatiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae	0.93 %
Hyphomicrobiales incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis	0.93 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.09 %
Deuterostomia	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia	2.80 %
Pseudolabrys	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys	2.80 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.80 %
Pseudorhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes	0.93 %
Nitrobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter	0.93 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	0.93 %
Thiocapsa	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Thiocapsa	0.93 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.09 %
unclassified Pseudolabrys	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys	2.80 %
Chordata	phylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata	2.80 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.80 %
unclassified Nitrobacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter → unclassified Nitrobacter	0.93 %
Pseudorhodoplanes sinuspersici	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → Pseudorhodoplanes sinuspersici	0.93 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	0.93 %
unclassified Thiocapsa	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Thiocapsa → unclassified Thiocapsa	0.93 %
Afipia felis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia felis	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.09 %
Craniata	subphylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata	2.80 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.80 %
Pseudolabrys sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp.	1.87 %
Thiocapsa sp. KS1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Thiocapsa → unclassified Thiocapsa → Thiocapsa sp. KS1	0.93 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.93 %
Pseudolabrys sp. Root1462	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	0.93 %
Nitrobacter sp. Nb-311A	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter → unclassified Nitrobacter → Nitrobacter sp. Nb-311A	0.93 %
Pseudorhodoplanes sinuspersici	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → Pseudorhodoplanes sinuspersici	0.93 %
Afipia felis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia felis	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.09 %
Vertebrata	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata	2.80 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.80 %
Pseudolabrys sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp.	1.87 %
Thiocapsa sp. KS1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Thiocapsa → unclassified Thiocapsa → Thiocapsa sp. KS1	0.93 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.93 %
Pseudolabrys sp. Root1462	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	0.93 %
Nitrobacter sp. Nb-311A	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter → unclassified Nitrobacter → Nitrobacter sp. Nb-311A	0.93 %
Pseudorhodoplanes sinuspersici	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → Pseudorhodoplanes sinuspersici	0.93 %
Afipia felis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia felis	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.09 %
Gnathostomata	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata	2.80 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.80 %
Pseudolabrys sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp.	1.87 %
Thiocapsa sp. KS1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Thiocapsa → unclassified Thiocapsa → Thiocapsa sp. KS1	0.93 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.93 %
Pseudolabrys sp. Root1462	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	0.93 %
Nitrobacter sp. Nb-311A	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter → unclassified Nitrobacter → Nitrobacter sp. Nb-311A	0.93 %
Pseudorhodoplanes sinuspersici	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → Pseudorhodoplanes sinuspersici	0.93 %
Afipia felis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia felis	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.09 %
Chondrichthyes	class	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata → Chondrichthyes	2.80 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.80 %
Pseudolabrys sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp.	1.87 %
Thiocapsa sp. KS1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Thiocapsa → unclassified Thiocapsa → Thiocapsa sp. KS1	0.93 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.93 %
Pseudolabrys sp. Root1462	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	0.93 %
Nitrobacter sp. Nb-311A	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter → unclassified Nitrobacter → Nitrobacter sp. Nb-311A	0.93 %
Pseudorhodoplanes sinuspersici	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → Pseudorhodoplanes sinuspersici	0.93 %
Afipia felis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia felis	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.09 %
Elasmobranchii	subclass	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata → Chondrichthyes → Elasmobranchii	2.80 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.80 %
Pseudolabrys sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp.	1.87 %
Thiocapsa sp. KS1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Thiocapsa → unclassified Thiocapsa → Thiocapsa sp. KS1	0.93 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.93 %
Pseudolabrys sp. Root1462	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	0.93 %
Nitrobacter sp. Nb-311A	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter → unclassified Nitrobacter → Nitrobacter sp. Nb-311A	0.93 %
Pseudorhodoplanes sinuspersici	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → Pseudorhodoplanes sinuspersici	0.93 %
Afipia felis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia felis	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.09 %
Selachii	infraclass	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata → Chondrichthyes → Elasmobranchii → Selachii	2.80 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.80 %
Pseudolabrys sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp.	1.87 %
Thiocapsa sp. KS1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Thiocapsa → unclassified Thiocapsa → Thiocapsa sp. KS1	0.93 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.93 %
Pseudolabrys sp. Root1462	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	0.93 %
Nitrobacter sp. Nb-311A	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter → unclassified Nitrobacter → Nitrobacter sp. Nb-311A	0.93 %
Pseudorhodoplanes sinuspersici	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → Pseudorhodoplanes sinuspersici	0.93 %
Afipia felis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia felis	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.09 %
Galeomorphii	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata → Chondrichthyes → Elasmobranchii → Selachii → Galeomorphii	2.80 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.80 %
Pseudolabrys sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp.	1.87 %
Thiocapsa sp. KS1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Thiocapsa → unclassified Thiocapsa → Thiocapsa sp. KS1	0.93 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.93 %
Pseudolabrys sp. Root1462	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	0.93 %
Nitrobacter sp. Nb-311A	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter → unclassified Nitrobacter → Nitrobacter sp. Nb-311A	0.93 %
Pseudorhodoplanes sinuspersici	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → Pseudorhodoplanes sinuspersici	0.93 %
Afipia felis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia felis	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.09 %
Galeoidea	superorder	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata → Chondrichthyes → Elasmobranchii → Selachii → Galeomorphii → Galeoidea	2.80 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.80 %
Pseudolabrys sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp.	1.87 %
Thiocapsa sp. KS1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Thiocapsa → unclassified Thiocapsa → Thiocapsa sp. KS1	0.93 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.93 %
Pseudolabrys sp. Root1462	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	0.93 %
Nitrobacter sp. Nb-311A	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter → unclassified Nitrobacter → Nitrobacter sp. Nb-311A	0.93 %
Pseudorhodoplanes sinuspersici	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → Pseudorhodoplanes sinuspersici	0.93 %
Afipia felis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia felis	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.09 %
Orectolobiformes	order	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata → Chondrichthyes → Elasmobranchii → Selachii → Galeomorphii → Galeoidea → Orectolobiformes	2.80 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.80 %
Pseudolabrys sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp.	1.87 %
Thiocapsa sp. KS1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Thiocapsa → unclassified Thiocapsa → Thiocapsa sp. KS1	0.93 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.93 %
Pseudolabrys sp. Root1462	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	0.93 %
Nitrobacter sp. Nb-311A	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter → unclassified Nitrobacter → Nitrobacter sp. Nb-311A	0.93 %
Pseudorhodoplanes sinuspersici	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → Pseudorhodoplanes sinuspersici	0.93 %
Afipia felis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia felis	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.09 %
Hemiscylliidae	family	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata → Chondrichthyes → Elasmobranchii → Selachii → Galeomorphii → Galeoidea → Orectolobiformes → Hemiscylliidae	2.80 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.80 %
Pseudolabrys sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp.	1.87 %
Thiocapsa sp. KS1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Thiocapsa → unclassified Thiocapsa → Thiocapsa sp. KS1	0.93 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.93 %
Pseudolabrys sp. Root1462	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	0.93 %
Nitrobacter sp. Nb-311A	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter → unclassified Nitrobacter → Nitrobacter sp. Nb-311A	0.93 %
Pseudorhodoplanes sinuspersici	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → Pseudorhodoplanes sinuspersici	0.93 %
Afipia felis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia felis	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.09 %
Chiloscyllium	genus	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata → Chondrichthyes → Elasmobranchii → Selachii → Galeomorphii → Galeoidea → Orectolobiformes → Hemiscylliidae → Chiloscyllium	2.80 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.80 %
Pseudolabrys sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp.	1.87 %
Thiocapsa sp. KS1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Thiocapsa → unclassified Thiocapsa → Thiocapsa sp. KS1	0.93 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.93 %
Pseudolabrys sp. Root1462	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	0.93 %
Nitrobacter sp. Nb-311A	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter → unclassified Nitrobacter → Nitrobacter sp. Nb-311A	0.93 %
Pseudorhodoplanes sinuspersici	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → Pseudorhodoplanes sinuspersici	0.93 %
Afipia felis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia felis	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.09 %
Chiloscyllium punctatum	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata → Chondrichthyes → Elasmobranchii → Selachii → Galeomorphii → Galeoidea → Orectolobiformes → Hemiscylliidae → Chiloscyllium → Chiloscyllium punctatum	2.80 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.80 %
Pseudolabrys sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp.	1.87 %
Thiocapsa sp. KS1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Thiocapsa → unclassified Thiocapsa → Thiocapsa sp. KS1	0.93 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.93 %
Pseudolabrys sp. Root1462	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	0.93 %
Nitrobacter sp. Nb-311A	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter → unclassified Nitrobacter → Nitrobacter sp. Nb-311A	0.93 %
Pseudorhodoplanes sinuspersici	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → Pseudorhodoplanes sinuspersici	0.93 %
Afipia felis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia felis	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000655\|AF_2010_repII_A100DRAFT_1010781	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1747	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10078924	Not Available	705	Open in IMG/M
3300000953\|JGI11615J12901_10230607	Not Available	685	Open in IMG/M
3300002073\|JGI24745J21846_1000601	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3233	Open in IMG/M
3300003994\|Ga0055435_10006068	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2090	Open in IMG/M
3300004156\|Ga0062589_101383017	Not Available	685	Open in IMG/M
3300004633\|Ga0066395_10427508	Not Available	751	Open in IMG/M
3300005163\|Ga0066823_10088233	Not Available	620	Open in IMG/M
3300005165\|Ga0066869_10029181	Not Available	881	Open in IMG/M
3300005276\|Ga0065717_1002004	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3819	Open in IMG/M
3300005290\|Ga0065712_10114707	Not Available	1753	Open in IMG/M
3300005328\|Ga0070676_10134949	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata → Chondrichthyes → Elasmobranchii → Selachii → Galeomorphii → Galeoidea → Orectolobiformes → Hemiscylliidae → Chiloscyllium → Chiloscyllium punctatum	1565	Open in IMG/M
3300005332\|Ga0066388_100440987	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1944	Open in IMG/M
3300005332\|Ga0066388_102145327	All Organisms → cellular organisms → Bacteria → Proteobacteria	1007	Open in IMG/M
3300005339\|Ga0070660_101949045	Not Available	501	Open in IMG/M
3300005340\|Ga0070689_100011282	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	6396	Open in IMG/M
3300005406\|Ga0070703_10393644	Not Available	602	Open in IMG/M
3300005434\|Ga0070709_11380261	Not Available	570	Open in IMG/M
3300005439\|Ga0070711_101960201	Not Available	515	Open in IMG/M
3300005457\|Ga0070662_100520767	Not Available	994	Open in IMG/M
3300005468\|Ga0070707_100413562	Not Available	1309	Open in IMG/M
3300005539\|Ga0068853_102064513	Not Available	553	Open in IMG/M
3300005539\|Ga0068853_102389142	Not Available	512	Open in IMG/M
3300005548\|Ga0070665_101867331	Not Available	607	Open in IMG/M
3300005615\|Ga0070702_100536704	Not Available	866	Open in IMG/M
3300005616\|Ga0068852_101375903	Not Available	728	Open in IMG/M
3300005843\|Ga0068860_100604900	Not Available	1102	Open in IMG/M
3300006057\|Ga0075026_100163314	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata → Chondrichthyes → Elasmobranchii → Selachii → Galeomorphii → Galeoidea → Orectolobiformes → Hemiscylliidae → Chiloscyllium → Chiloscyllium punctatum	1150	Open in IMG/M
3300006175\|Ga0070712_100181739	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1639	Open in IMG/M
3300006195\|Ga0075366_10942401	All Organisms → cellular organisms → Bacteria	538	Open in IMG/M
3300006903\|Ga0075426_10959054	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia felis	646	Open in IMG/M
3300007076\|Ga0075435_101831174	Not Available	533	Open in IMG/M
3300009148\|Ga0105243_10696055	Not Available	990	Open in IMG/M
3300009551\|Ga0105238_11023120	Not Available	847	Open in IMG/M
3300010043\|Ga0126380_11354719	Not Available	622	Open in IMG/M
3300010358\|Ga0126370_11011543	Not Available	759	Open in IMG/M
3300010359\|Ga0126376_10199713	Not Available	1655	Open in IMG/M
3300010360\|Ga0126372_10594236	Not Available	1061	Open in IMG/M
3300010366\|Ga0126379_11814431	Not Available	714	Open in IMG/M
3300010373\|Ga0134128_10970601	Not Available	940	Open in IMG/M
3300010373\|Ga0134128_12031731	Not Available	633	Open in IMG/M
3300010376\|Ga0126381_100473778	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1760	Open in IMG/M
3300010396\|Ga0134126_10760348	Not Available	1098	Open in IMG/M
3300010396\|Ga0134126_11141468	Not Available	868	Open in IMG/M
3300010398\|Ga0126383_10142469	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Thiocapsa → unclassified Thiocapsa → Thiocapsa sp. KS1	2222	Open in IMG/M
3300010401\|Ga0134121_10512593	Not Available	1107	Open in IMG/M
3300012356\|Ga0137371_10902670	Not Available	672	Open in IMG/M
3300012496\|Ga0157353_1003666	Not Available	1022	Open in IMG/M
3300012901\|Ga0157288_10000039	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	12028	Open in IMG/M
3300012951\|Ga0164300_10611146	Not Available	645	Open in IMG/M
3300012958\|Ga0164299_10696878	Not Available	710	Open in IMG/M
3300012971\|Ga0126369_10192886	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1958	Open in IMG/M
3300014299\|Ga0075303_1057243	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	677	Open in IMG/M
3300017792\|Ga0163161_10535114	Not Available	958	Open in IMG/M
3300017792\|Ga0163161_11539821	Not Available	585	Open in IMG/M
3300017939\|Ga0187775_10204470	Not Available	735	Open in IMG/M
3300017947\|Ga0187785_10150094	Not Available	978	Open in IMG/M
3300018064\|Ga0187773_11124299	Not Available	523	Open in IMG/M
3300019362\|Ga0173479_10001000	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	5906	Open in IMG/M
3300022886\|Ga0247746_1005235	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp.	2502	Open in IMG/M
3300022898\|Ga0247745_1016984	Not Available	1017	Open in IMG/M
3300022899\|Ga0247795_1003122	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp.	2730	Open in IMG/M
3300023069\|Ga0247751_1000124	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → Pseudorhodoplanes sinuspersici	5704	Open in IMG/M
3300025913\|Ga0207695_10790540	Not Available	829	Open in IMG/M
3300025916\|Ga0207663_10986987	Not Available	675	Open in IMG/M
3300025920\|Ga0207649_11486291	Not Available	536	Open in IMG/M
3300025925\|Ga0207650_10042455	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3336	Open in IMG/M
3300025930\|Ga0207701_10608592	Not Available	930	Open in IMG/M
3300025934\|Ga0207686_10495922	Not Available	947	Open in IMG/M
3300025945\|Ga0207679_10196538	Not Available	1682	Open in IMG/M
3300025945\|Ga0207679_10269708	Not Available	1455	Open in IMG/M
3300025949\|Ga0207667_12228033	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter → unclassified Nitrobacter → Nitrobacter sp. Nb-311A	505	Open in IMG/M
3300025955\|Ga0210071_1017095	Not Available	880	Open in IMG/M
3300026095\|Ga0207676_10659681	Not Available	1010	Open in IMG/M
3300026121\|Ga0207683_10543530	Not Available	1074	Open in IMG/M
3300026142\|Ga0207698_10360592	Not Available	1376	Open in IMG/M
3300026792\|Ga0207499_103106	Not Available	571	Open in IMG/M
3300026802\|Ga0207511_101280	Not Available	1525	Open in IMG/M
3300026827\|Ga0207591_106977	Not Available	569	Open in IMG/M
3300027122\|Ga0207538_1000039	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3466	Open in IMG/M
3300027288\|Ga0208525_1006064	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata → Chondrichthyes → Elasmobranchii → Selachii → Galeomorphii → Galeoidea → Orectolobiformes → Hemiscylliidae → Chiloscyllium → Chiloscyllium punctatum	1270	Open in IMG/M
3300027471\|Ga0209995_1036881	Not Available	823	Open in IMG/M
3300027617\|Ga0210002_1005741	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1867	Open in IMG/M
3300027654\|Ga0209799_1076864	Not Available	752	Open in IMG/M
3300027874\|Ga0209465_10447306	All Organisms → cellular organisms → Bacteria	646	Open in IMG/M
3300028380\|Ga0268265_11050896	Not Available	806	Open in IMG/M
3300028718\|Ga0307307_10058826	Not Available	1134	Open in IMG/M
3300028720\|Ga0307317_10104393	Not Available	940	Open in IMG/M
3300028720\|Ga0307317_10123203	Not Available	865	Open in IMG/M
3300028755\|Ga0307316_10248004	Not Available	647	Open in IMG/M
3300028792\|Ga0307504_10115777	Not Available	873	Open in IMG/M
3300028807\|Ga0307305_10026692	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2624	Open in IMG/M
3300030844\|Ga0075377_11510917	Not Available	925	Open in IMG/M
(restricted) 3300031197\|Ga0255310_10002788	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	4547	Open in IMG/M
3300031200\|Ga0307496_10063343	Not Available	652	Open in IMG/M
3300031740\|Ga0307468_101646399	Not Available	601	Open in IMG/M
3300031768\|Ga0318509_10076805	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1762	Open in IMG/M
3300031771\|Ga0318546_10230855	Not Available	1270	Open in IMG/M
3300031797\|Ga0318550_10229135	Not Available	900	Open in IMG/M
3300031847\|Ga0310907_10002565	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4869	Open in IMG/M
3300031879\|Ga0306919_10217159	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1427	Open in IMG/M
3300031880\|Ga0318544_10423101	Not Available	518	Open in IMG/M
3300031944\|Ga0310884_10157307	Not Available	1178	Open in IMG/M
3300032068\|Ga0318553_10142971	Not Available	1237	Open in IMG/M
3300032076\|Ga0306924_10797030	Not Available	1053	Open in IMG/M
3300032180\|Ga0307471_101556217	Not Available	818	Open in IMG/M
3300033513\|Ga0316628_101966142	Not Available	777	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	71.03%
Host-Associated	Host-Associated	28.97%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	68.22%
Plants	Host-Associated → Plants	28.97%
Aquatic	Environmental → Aquatic	2.80%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	68.22%
Rhizoplane	Host-Associated → Plants → Rhizoplane	14.95%
Rhizosphere	Host-Associated → Plants → Rhizosphere	13.08%
Marine	Environmental → Aquatic → Marine	1.87%
Sediment	Environmental → Aquatic → Sediment	0.93%
Roots	Host-Associated → Plants → Roots	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	50.47%
Loam	Environmental → Terrestrial → Soil → Loam	12.15%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	12.15%
Soil	Host-Associated → Plants → Rhizosphere → Soil	7.48%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.61%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.67%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.87%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.87%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.93%
Sand	Environmental → Terrestrial → Soil → Sand	0.93%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.93%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	27.10%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	12.15%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	11.21%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	8.41%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.48%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	7.48%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.61%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.67%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.67%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.87%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.87%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.87%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.87%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.93%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	10.28%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	7.48%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.61%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	4.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.67%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.67%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	4.67%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	4.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.80%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.80%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.87%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.87%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.87%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.87%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.87%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.87%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.93%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.93%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.93%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.93%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.93%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.93%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.93%
Sandy Soil	Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil	0.93%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.93%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.93%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300000953	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300002073	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4	Host-Associated	Open in IMG/M
3300003994	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqA_D2	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005163	Soil and rhizosphere microbial communities from Laval, Canada - mgHMB	Environmental	Open in IMG/M
3300005165	Soil and rhizosphere microbial communities from Laval, Canada - mgHMC	Environmental	Open in IMG/M
3300005276	Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample Mutant cpr5	Host-Associated	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006195	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012496	Unplanted soil (control) microbial communities from North Carolina - M.Soil.4.yng.090610	Environmental	Open in IMG/M
3300012901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014299	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleC_D1	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017939	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MG	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300022886	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S079-202R-5	Environmental	Open in IMG/M
3300022898	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S109-311C-5	Environmental	Open in IMG/M
3300022899	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S016-104C-6	Environmental	Open in IMG/M
3300023069	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S049-202B-5	Environmental	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025955	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleA_D2 (SPAdes)	Environmental	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026792	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G08A3-12 (SPAdes)	Environmental	Open in IMG/M
3300026802	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-SCHO22-C (SPAdes)	Environmental	Open in IMG/M
3300026827	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G09A4-11 (SPAdes)	Environmental	Open in IMG/M
3300027122	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G01A2-11 (SPAdes)	Environmental	Open in IMG/M
3300027288	Soil and rhizosphere microbial communities from Laval, Canada - mgHMC (SPAdes)	Environmental	Open in IMG/M
3300027471	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 AM (SPAdes)	Host-Associated	Open in IMG/M
3300027617	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 S AM (SPAdes)	Host-Associated	Open in IMG/M
3300027654	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300030844	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA11 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031197 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH1_T0_E1	Environmental	Open in IMG/M
3300031200	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 9_S	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.35
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.35
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F092502

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A100DRAFT_10107811	3300000655	Forest Soil	ELANVRDRQEGRTQTPKKPAPKPKKPPNDGESGQTAGAKPNP*
AF_2010_repII_A001DRAFT_100789241	3300000793	Forest Soil	PTAPMTEEEQARLEKDLANTRDRQEGRPPPAKKSANTGKKSPNGAQGGQTAGAKPDP*
JGI11615J12901_102306071	3300000953	Soil	RLEKELANVRDRQEGRPPAGKTGASTAKKPPRDVQNSQTDGAKANP*
JGI24745J21846_10006014	3300002073	Corn, Switchgrass And Miscanthus Rhizosphere	KELINVRDRQEGRPAATKKAAPTAKKPPKGTQNGQPDGAKANP*
Ga0055435_100060682	3300003994	Natural And Restored Wetlands	MTEEEQVRLEKELASVRDRQEGRPPAAKGAPGPKKPPKDMQNSQTDGAKANP*
Ga0062589_1013830171	3300004156	Soil	SVPMTEEEQLKLEKDLANVRDRQEGRPPSARKPANTAKKPPGDAENGQTAGAKPNP*
Ga0066395_104275082	3300004633	Tropical Forest Soil	RSSAPMTEEEQVKLEKELANIRDHQEGRPAPAKKPANTTKKSPNDAEKGQTAGVKPNP*
Ga0066823_100882332	3300005163	Soil	LEKDLARARDQQEGRPPQVKPPAKKPAPAAKKPSKDDENGQTAGAKPNP*
Ga0066869_100291812	3300005165	Soil	ARATIPMTEDEQAKLEKELANVRDRQEGRTQSPKKPAPKTKKPPNEAEGGQTAGAKPNP*
Ga0065717_10020042	3300005276	Arabidopsis Rhizosphere	MTEEEQVRLEKELINVRDRQEGRPAATKKAAPTAKKPPKGAQNGQTDGAKANP*
Ga0065712_101147072	3300005290	Miscanthus Rhizosphere	MTEAEQAKLEKELVKVRDRQEGRQLATKKAGTTAKKPPKDTQNGQTDGAKANP*
Ga0070676_101349492	3300005328	Miscanthus Rhizosphere	DRTSVPMTEEEQVKLEKDLANVRDRQEGRPPSARKPANTAKKPPSDAENGQTAGAKPNP*
Ga0066388_1004409872	3300005332	Tropical Forest Soil	MTEEEQIRLEKELANVRDRQEGRSQATKKAAAAAKKPPNTVESGQTSGVKPNP*
Ga0066388_1021453271	3300005332	Tropical Forest Soil	PMTEEEQVKLEKDLANMRDRQEGRPPTPKKPASTAKKSPKDVESGQTAGAKPNP*
Ga0070660_1019490451	3300005339	Corn Rhizosphere	LANIRDRQEGRTQPSKKPASKPKKPPNDAQNGQTAGAKPNP**
Ga0070689_1000112826	3300005340	Switchgrass Rhizosphere	MTEEEQVRLEKELINVRDRQEGRPAATKKAAPTAKKPPKGAQNGQTDGAKPNP*
Ga0070703_103936442	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	RLEKELINVRDRQEGRPAATKKAAPTAKKPPKGTQNGQPDGAKANP*
Ga0070709_113802611	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	EQVKLEKDLANVRDRQEGRSPSARKPANTVKKPPSDAENGQTAGAKPNP*
Ga0070711_1019602011	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	RATVPMTEEEQVKLEKDLAKARDRQEGHPAGKKAATTPKKPPKDAQGGQSDGAKTNP*
Ga0070662_1005207671	3300005457	Corn Rhizosphere	RTSVPMTEEEQLKLEKDMANVRDRQEGRPPSARKPANTAKKPPGDAENGQTAGAKPNP*
Ga0070707_1004135622	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	DRTSVPMTEEEQVKLEKDLANVRDRQEGRSPSARKPANTVKKPPSDAENGQTAGAKPNP*
Ga0068853_1020645132	3300005539	Corn Rhizosphere	TEEEQVKLEKDLANVRDRQEGRSPSARKPANTVKKPPSDAENGQTAGAKPNP*
Ga0068853_1023891421	3300005539	Corn Rhizosphere	ARATVPMTEDEQVKLEKELANVRDRQEGRTQPSKKPAPKPKKPPNDAQNGQTAGAKPNP*
Ga0070665_1018673311	3300005548	Switchgrass Rhizosphere	TEEEQVKLEKDLANVRDRQEGRPPSARKPANTAKKPPSDAENGQTAGAKPNP*
Ga0070702_1005367041	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	DMPPDRTSVPMTEEEQVKLEKDLANVRDRQEGRPPSARKPANTAKKPPSDAENGQTAGAKPNP*
Ga0068852_1013759031	3300005616	Corn Rhizosphere	VPMTEEEQVKLEKDLANVRDRQEGRSPSARKPANTVKKPPSDAENGQTAGAKPNP*
Ga0068860_1006049002	3300005843	Switchgrass Rhizosphere	DMPPDRTSVPMTEEEQVKLEKDLANVRDRQEGRSPSARKPANTVKKPPSDAENGQTAGAKPNP*
Ga0075026_1001633143	3300006057	Watersheds	SVPMTDEEQLRLEKDLASERDRQEGRPPSGKKASSTAKKPLKDTENGQTAGAKPNP*
Ga0070712_1001817393	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	RATVPMTEDEQVKLEKELANIRDRQEGRTQPSKKPAPKPKKPPNDAQNGQTAGAKPNP*
Ga0075366_109424011	3300006195	Populus Endosphere	PMTEEEQVRLEKELINVRDRQEGRPAATKKAAPTAKKPPKGTQNGQPDGAKANP*
Ga0075426_109590542	3300006903	Populus Rhizosphere	PPARSSIPMTEEEQVKAEKELTALRDRQEGRSPASKKAAAAAKKPPTAGQNGQTTGAKPNP*
Ga0075435_1018311742	3300007076	Populus Rhizosphere	KELVKVRDRQEGRQLATKKAGTTAKKPPKDTQNGQTDGAKANP*
Ga0105243_106960551	3300009148	Miscanthus Rhizosphere	LEKDLANVRDRQEGRPPSARKPANTAKKPPGDAENGQTAGAKPNP*
Ga0105238_110231201	3300009551	Corn Rhizosphere	MTEEEQVKLEKDLANVRDRQEGRPPSARKPANTAKKPPGDAENGQTAGAKPNP*
Ga0126380_113547192	3300010043	Tropical Forest Soil	RATVPMTEDEQVKLEKELANIRDRQEGRTQPSKKPVAKPKKPPNDAQDGQTAGAKPNP*
Ga0126370_110115432	3300010358	Tropical Forest Soil	TVRDRQEGRPPAGKKGVSSAKKPPKDVQNSQTDGAKANP*
Ga0126376_101997131	3300010359	Tropical Forest Soil	RVRDRQEGRPPASKKASPTAKNPPKEAPKSQTDGAKANP*
Ga0126372_105942361	3300010360	Tropical Forest Soil	TEEEQVKLEKELANVRDRQEGRTQTPKKPAPKPKKPPNDAESGQTAGAKPNP*
Ga0126379_118144311	3300010366	Tropical Forest Soil	MPPDRPSAPMTEEEQVKLEKELANIRDHQEGRPAPAKKPANTTKKSPNDAEKGQTAGVKPNP*
Ga0134128_109706012	3300010373	Terrestrial Soil	RQEGRSPSARKPANTVKKPPSDAENGQTAGAKPNP*
Ga0134128_120317312	3300010373	Terrestrial Soil	MTEDEQVKLEKELANIRDRQEGRTQPSKKPAPKPKKPPNDAQNGQTAGAKPNP*
Ga0126381_1004737783	3300010376	Tropical Forest Soil	EEQVKLEKELANVRDRQEGRTQTPKKPVPKPKKPPNGGESGQPAGAKPNP*
Ga0134126_107603482	3300010396	Terrestrial Soil	KDLANVRDRQEGRPPSARKPANTAKKPPSDAENGQTAGAKPNP*
Ga0134126_111414681	3300010396	Terrestrial Soil	ATIPMTEDEQAKLDKELANVRDRQEGRTQSPKKPAPKTKKPPNEAEGGQTAGAKPNP*
Ga0126383_101424691	3300010398	Tropical Forest Soil	EEQVKLEKDLANIRDRQEGRSAPAKKPASAAKKLPKDTENGQSAGIKPNP*
Ga0134121_105125931	3300010401	Terrestrial Soil	EQLKLEKDLANVRDRQEGRPPSARKPANTAKKPPGDAENGQTAGAKPNP*
Ga0137371_109026701	3300012356	Vadose Zone Soil	TEEEKVKLEKELAAVRDRQEGRPPPGKKATPASKKPPNDNENGQTAGAKANP*
Ga0157353_10036661	3300012496	Unplanted Soil	MPPARATVPMTEDEQVKLEKELANVRDRQEGLTQPSKKPAPKPKKPPNDAQNGQTAGAKPNP*
Ga0157288_100000391	3300012901	Soil	VRDRQEGRPAATKKAAPTAKKPPKGAQNGQTDGAKPNP*
Ga0164300_106111462	3300012951	Soil	PPDRAAVPMSEEEQFKLEKELANVRDRQEGRPAPGKKVAPVTKKPPNDAENGQTAGSKANP*
Ga0164299_106968782	3300012958	Soil	SVPMTEEEQVKLEKDLANVRDRQEGRPPSARKPANTAKKPPSDAENGQTAGAKPNP*
Ga0126369_101928862	3300012971	Tropical Forest Soil	MPPDRSSAPMTEEEQVKLEKELANIRDHQEGRPAPAKKPANTTKKSPNDAEKGQTAGVKPNP*
Ga0075303_10572431	3300014299	Natural And Restored Wetlands	MTEEEQVRLEKELASVRDRQEGRPPAAKGAPGPKKPPKDMQNSQTDGAK
Ga0163161_105351142	3300017792	Switchgrass Rhizosphere	ANVRDRQEGRSPSARKPANTVKKPPSDAENGQTAGAKPNP
Ga0163161_115398211	3300017792	Switchgrass Rhizosphere	KELANIRDRQEGRTQPSKKPASKPKKPPNDAQNGQTAGAKPNP
Ga0187775_102044701	3300017939	Tropical Peatland	KELASARDRQEGRPRPDKKAVPTAKKPPNDAEYGQTAGAKANP
Ga0187785_101500942	3300017947	Tropical Peatland	DMPPDRSSPPMTEEEQVKLEKDLANTRDRQEGRPPPAKKPASTVKKPPKEAESGQTAGAKPNP
Ga0187773_111242991	3300018064	Tropical Peatland	MTEEEQVKLEKDLANVRDRQEGRPAPSKKSAPAAKKPPNDAVNDTANGQTAGAKANP
Ga0173479_100010001	3300019362	Soil	PMTEEEQVRLEKELINVRDRQEGRPAATKKAAPTAKKPPKGTQNGQPDGAKANP
Ga0247746_10052352	3300022886	Soil	MTEEEQVRLEKELINVRDRQEGRPAATKKAAPTAKKPPKGAQNGQTDGAKPNP
Ga0247745_10169841	3300022898	Soil	VRDRQEGRPAATKKAAPTAKKPPKGAQNGQTDGAKPNP
Ga0247795_10031223	3300022899	Soil	MTEEEQVRLEKELINVRDRQEGRPAATKKAAPTAKKPPKGAQNGQTDGAKANP
Ga0247751_10001246	3300023069	Soil	RQEGRPAATKKAAPTAKKPPKGAQNGQTDGAKANP
Ga0207695_107905401	3300025913	Corn Rhizosphere	LEKELINVRDRQEGRPAATKKAAPTAKKPPKGTQNGQPDGAKANP
Ga0207663_109869871	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	PMTEEEQVKLEKDLANVRDRQEGRPPSARKPANTAKKPPSDAENGQTAGAKPNP
Ga0207649_114862911	3300025920	Corn Rhizosphere	QVKLEKELANIRDRQEGRTQPSKKPAPKPKKPPNDAQNGQTAGAKPNP
Ga0207650_100424553	3300025925	Switchgrass Rhizosphere	MTEAEQAKLEKELVKVRDRQEGRQLATKKAGTTAKKPPKDTQNGQTDGAKANP
Ga0207701_106085922	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	EKELVKVRDRQEGRQLATKKAGTTAKKPPKDTQNGQTDGAKANP
Ga0207686_104959221	3300025934	Miscanthus Rhizosphere	RDRQEGRPPSARKPANTAKKPPGDAENGQTAGAKPNP
Ga0207679_101965381	3300025945	Corn Rhizosphere	EQVKLEKDLANVRDRQEGRPPSARKPANTAKKPPSDAENGQTAGAKPNP
Ga0207679_102697081	3300025945	Corn Rhizosphere	QVKLEKELINVRDRQEGRPPQGKKGAPTAKKPPKDAQNSQTDGTKPNP
Ga0207667_122280332	3300025949	Corn Rhizosphere	MPPDRTSVPMTEEEQVKLEKDLANVRDRQEGRPPSARKPANTAKKPPSDAENGQTAGAKPNP
Ga0210071_10170952	3300025955	Natural And Restored Wetlands	MTEEEQVRLEKELASVRDRQEGRPPAAKGAPGPKKPPKDMQNSQTDGAKANP
Ga0207676_106596812	3300026095	Switchgrass Rhizosphere	DRQEGRQLATKKAGTTAKKPPKDTQNGQTDGAKANP
Ga0207683_105435301	3300026121	Miscanthus Rhizosphere	KDLANVRDRQEGRPPSARKPANTAKKPPGDAENGQTAGAKPNP
Ga0207698_103605922	3300026142	Corn Rhizosphere	MTEDEQVKLEKELANIRDRQEGRTQPSKKPAPKPKKPPNDARNGQTAGAKPNP
Ga0207499_1031062	3300026792	Soil	LEKELINVRDRQEGRPASTKKAAPTAKKPPKGAQNGQTDGAKANP
Ga0207511_1012801	3300026802	Soil	EEEQVRLEKELINVRDRQEGRPAATKKAAPTAKKPPKGAQNGQTDGAKANP
Ga0207591_1069772	3300026827	Soil	SPMTEEEQVRLEKELINVRDRQEGRPAATKKAAPTAKKPPKGTQNGQPDGAKANP
Ga0207538_10000394	3300027122	Soil	TEEEQVRLEKELINVRDRQEGRPAATKKAAPTAKKPPKGTQNGQPDGAKANP
Ga0208525_10060642	3300027288	Soil	ASVPMTDEEQLRLERDLATQRDRQEGRPPPGKKPPLTAKKPPKDADDGQNTGAKANP
Ga0209995_10368812	3300027471	Arabidopsis Thaliana Rhizosphere	RDRQEGRPAATKKAAPTAKKPPKGTQNGQPDGAKANP
Ga0210002_10057411	3300027617	Arabidopsis Thaliana Rhizosphere	DRQEGRPAATKKAAPTAKKPPKGAQNGQTDGAKPNP
Ga0209799_10768641	3300027654	Tropical Forest Soil	PARKTVPMTEEEQVKLEKELANVRDRQEGRTQTPKKPAPKPKKPPNDGESGQTAGAKPNP
Ga0209465_104473061	3300027874	Tropical Forest Soil	MPPERASVTMTEEEQVKLEKELANVRDRQEGRAPQDKKVVPATKKRPEDSGNAQPAGDKANP
Ga0268265_110508961	3300028380	Switchgrass Rhizosphere	TEEEQVRLEKELINVRDRQEGRPASTKKAAPTAKKPPKGAQNGQTDGAKANP
Ga0307307_100588261	3300028718	Soil	QEGRAQPSKKKPAPTTKKPPNNTENGQTAGAKANP
Ga0307317_101043931	3300028720	Soil	VPMTEEDQVKLEKELTNVRDRQEGRTQSSKKPAPATKKPPNNAESGQTAGAKANP
Ga0307317_101232031	3300028720	Soil	RQEGRAQPSKKKPAPTTKKPPNNTENGQTAGAKANP
Ga0307316_102480042	3300028755	Soil	EQVRLEKELANARDRQEGRAQPSKKKPAPTTKKPPNNTENGQTAGAKANP
Ga0307504_101157772	3300028792	Soil	TEEEQVKLEKDLANVRDRQEGRPSPGKKTAPAAKKPPKDAENGQAAGAKANP
Ga0307305_100266921	3300028807	Soil	RLEKELANARDRQEGRAQPSKKKPAPTTKKPPNNTENGQTAGAKANP
Ga0075377_115109171	3300030844	Soil	EEEQVKLEKDLANVRDRQEGRPPSARKPANTAKKPPSDAENGQTAGAKPNP
(restricted) Ga0255310_100027883	3300031197	Sandy Soil	MTEEEQVRLEKELINVRDRQEGRPAATKKAAPTAKKPPKGAQNGQADGAKANP
Ga0307496_100633431	3300031200	Soil	KDLANVRDRQEGRPPSARKPANTAKKPPSDAENGQTAGAKPNP
Ga0307468_1016463992	3300031740	Hardwood Forest Soil	VRDRQEGSPPAGKKGAPTAKKPPKDVQNSQTDGAKANP
Ga0318509_100768051	3300031768	Soil	ARATVPMTEEEQVKLEKELANVRDRQEGRTQSPKKPAPKPKKPPNDGESGQTAGAKPNP
Ga0318546_102308551	3300031771	Soil	PMTEEDQLKLEKELANVRDRQEGRTQSPKKPAPKPKKPPNDGESGQTAGAKPNP
Ga0318550_102291351	3300031797	Soil	ELANVRDRQEGRTQSPKKSAPKPKKPPNDGESGQTAGAKPNP
Ga0310907_100025651	3300031847	Soil	MTEDEQVKLEKELANVRDRQEGRTQPSKKPAPKPKKPPNDAQNGQTAGAKPNP
Ga0306919_102171592	3300031879	Soil	MPPDRSSAPMTEEEQVKLEKELANIRDHQEGRPAPAKKPAKTTKKSPNDAETGQTAGVKPNP
Ga0318544_104231012	3300031880	Soil	EEQVKLEKELANVRDRQEGRTQSPKKSAPKPKKPPNDGESGQTAGAKPNP
Ga0310884_101573072	3300031944	Soil	VRLEKELINVRDRQEGRPAATKKAAPTAKKPPKGAQNGQTDGAKANP
Ga0318553_101429711	3300032068	Soil	ATVPMTEEEQVKLEKELANVRDRQEGRTQSPKKPAPKPKKPPNDGESGQTAGAKPNP
Ga0306924_107970302	3300032076	Soil	KLEKELANIRDHQEGRPAPAKKPAKTTKKSPNDAETGQTAGVKPNP
Ga0307471_1015562171	3300032180	Hardwood Forest Soil	LITVRERQEGRPPAGKKGAPTAKKPPKDVQNSQTDGAKANP
Ga0316628_1019661421	3300033513	Soil	RALATMSEDEQVRLEKELANVRDRQEGKTPSGKKAPPTAKKLPKDAENGRSAGAKPNP

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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