Metagenome / Metatranscriptome Family F092501

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F092501
Family Type	Metagenome / Metatranscriptome
Number of Sequences	107
Average Sequence Length	164 residues
Representative Sequence	MSMKNRDVSNMKRRLVWILLFHSVLGLTGIPVRAQDTRSEEKALVVEPGNDFRAALEKGVRLKAVGQPITAKLLEPVYAGEDLALPAGSTIKGHVSSITTAPMRRRAGRLLAGDFTPPKTAQVTFDQLVLSDGTTVPIHSDTAVGLGRVANSRYLPKAQRPGMRQKLKGAMAPLRE
Number of Associated Samples	89
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	84.11 %
% of genes near scaffold ends (potentially truncated)	93.46 %
% of genes from short scaffolds (< 2000 bps)	89.72 %
Associated GOLD sequencing projects	78
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.39

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (28.972 % of family members)
Environment Ontology (ENVO)	Unclassified (36.449 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (51.402 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 16.18% β-sheet: 22.55% Coil/Unstructured: 61.27%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.39
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.39
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF12852	Cupin_6	26.17
PF02518	HATPase_c	12.15
PF03743	TrbI	3.74
PF00486	Trans_reg_C	1.87
PF02915	Rubrerythrin	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG2948	Type IV secretory pathway, VirB10 component	Intracellular trafficking, secretion, and vesicular transport [U]	3.74

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	65.42 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.80 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	37.38 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	26.17 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.93 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.93 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	37.38 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	26.17 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	0.93 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.93 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	37.38 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	26.17 %
Syntrophobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales	0.93 %
Marinobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae	0.93 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	37.38 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	19.63 %
Syntrophobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophobacteraceae	0.93 %
Marinobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae → Marinobacter	0.93 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	37.38 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	17.76 %
Desulfacinum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophobacteraceae → Desulfacinum	0.93 %
Marinobacter adhaerens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae → Marinobacter → Marinobacter adhaerens	0.93 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	37.38 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	17.76 %
Desulfacinum hydrothermale	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophobacteraceae → Desulfacinum → Desulfacinum hydrothermale	0.93 %
Marinobacter adhaerens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae → Marinobacter → Marinobacter adhaerens	0.93 %
Unclassified	root	N/A	0.00 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001545\|JGI12630J15595_10101396	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	567	Open in IMG/M
3300001593\|JGI12635J15846_10652272	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	609	Open in IMG/M
3300002245\|JGIcombinedJ26739_100309652	All Organisms → cellular organisms → Bacteria	1463	Open in IMG/M
3300002245\|JGIcombinedJ26739_100748174	All Organisms → cellular organisms → Bacteria	857	Open in IMG/M
3300005176\|Ga0066679_10717027	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	646	Open in IMG/M
3300005290\|Ga0065712_10485971	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	659	Open in IMG/M
3300005340\|Ga0070689_100976448	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	752	Open in IMG/M
3300005367\|Ga0070667_101390327	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	658	Open in IMG/M
3300005436\|Ga0070713_100365420	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1341	Open in IMG/M
3300005445\|Ga0070708_101672076	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	592	Open in IMG/M
3300005518\|Ga0070699_101138603	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	716	Open in IMG/M
3300005560\|Ga0066670_10302532	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	973	Open in IMG/M
3300005563\|Ga0068855_101519772	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	687	Open in IMG/M
3300005602\|Ga0070762_10005490	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae → Marinobacter → Marinobacter adhaerens	6146	Open in IMG/M
3300005614\|Ga0068856_102347621	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	541	Open in IMG/M
3300005616\|Ga0068852_102458890	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	541	Open in IMG/M
3300005842\|Ga0068858_100754228	All Organisms → cellular organisms → Bacteria	948	Open in IMG/M
3300006028\|Ga0070717_10018557	All Organisms → cellular organisms → Bacteria	5435	Open in IMG/M
3300006031\|Ga0066651_10701567	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	543	Open in IMG/M
3300006175\|Ga0070712_100224513	All Organisms → cellular organisms → Bacteria	1488	Open in IMG/M
3300006176\|Ga0070765_100003025	All Organisms → cellular organisms → Bacteria	10752	Open in IMG/M
3300006358\|Ga0068871_101386798	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	662	Open in IMG/M
3300006871\|Ga0075434_101225228	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	762	Open in IMG/M
3300007076\|Ga0075435_101574984	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	576	Open in IMG/M
3300007258\|Ga0099793_10131584	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1176	Open in IMG/M
3300009089\|Ga0099828_10052256	All Organisms → cellular organisms → Bacteria → Acidobacteria	3396	Open in IMG/M
3300009092\|Ga0105250_10162153	All Organisms → cellular organisms → Bacteria	934	Open in IMG/M
3300009098\|Ga0105245_10722710	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1030	Open in IMG/M
3300009143\|Ga0099792_10389547	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	850	Open in IMG/M
3300010159\|Ga0099796_10150131	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	917	Open in IMG/M
3300010403\|Ga0134123_10108405	All Organisms → cellular organisms → Bacteria	2226	Open in IMG/M
3300012203\|Ga0137399_11627582	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	534	Open in IMG/M
3300012361\|Ga0137360_10468852	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1069	Open in IMG/M
3300012582\|Ga0137358_10076748	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2247	Open in IMG/M
3300012582\|Ga0137358_10159805	All Organisms → cellular organisms → Bacteria	1536	Open in IMG/M
3300012582\|Ga0137358_10815849	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	618	Open in IMG/M
3300012683\|Ga0137398_10297568	All Organisms → cellular organisms → Bacteria	1084	Open in IMG/M
3300012685\|Ga0137397_10552706	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	857	Open in IMG/M
3300012917\|Ga0137395_10242296	All Organisms → cellular organisms → Bacteria	1265	Open in IMG/M
3300012917\|Ga0137395_11015075	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	593	Open in IMG/M
3300012918\|Ga0137396_10213172	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1421	Open in IMG/M
3300012923\|Ga0137359_11737053	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	511	Open in IMG/M
3300012924\|Ga0137413_10087699	All Organisms → cellular organisms → Bacteria	1909	Open in IMG/M
3300012925\|Ga0137419_10476733	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	987	Open in IMG/M
3300012925\|Ga0137419_10536253	All Organisms → cellular organisms → Bacteria	933	Open in IMG/M
3300012927\|Ga0137416_10316605	All Organisms → cellular organisms → Bacteria	1298	Open in IMG/M
3300012929\|Ga0137404_12252870	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	510	Open in IMG/M
3300012989\|Ga0164305_10868041	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	755	Open in IMG/M
3300015054\|Ga0137420_1380477	All Organisms → cellular organisms → Bacteria → Proteobacteria	1644	Open in IMG/M
3300015241\|Ga0137418_10355348	All Organisms → cellular organisms → Bacteria	1208	Open in IMG/M
3300018431\|Ga0066655_10819700	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	633	Open in IMG/M
3300020170\|Ga0179594_10087572	All Organisms → cellular organisms → Bacteria	1105	Open in IMG/M
3300020170\|Ga0179594_10316105	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	592	Open in IMG/M
3300020579\|Ga0210407_11027682	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	627	Open in IMG/M
3300020579\|Ga0210407_11080839	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	609	Open in IMG/M
3300020581\|Ga0210399_11327174	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	565	Open in IMG/M
3300020582\|Ga0210395_10855628	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	677	Open in IMG/M
3300021046\|Ga0215015_10661899	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	826	Open in IMG/M
3300021088\|Ga0210404_10117808	All Organisms → cellular organisms → Bacteria	1361	Open in IMG/M
3300021088\|Ga0210404_10345698	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	825	Open in IMG/M
3300021168\|Ga0210406_11185996	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	556	Open in IMG/M
3300021168\|Ga0210406_11281232	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	529	Open in IMG/M
3300021170\|Ga0210400_10497846	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1006	Open in IMG/M
3300021170\|Ga0210400_10669362	All Organisms → cellular organisms → Bacteria	854	Open in IMG/M
3300021170\|Ga0210400_10875450	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	734	Open in IMG/M
3300021178\|Ga0210408_10479198	All Organisms → cellular organisms → Bacteria	990	Open in IMG/M
3300021180\|Ga0210396_10226279	All Organisms → cellular organisms → Bacteria → Acidobacteria	1666	Open in IMG/M
3300021432\|Ga0210384_11861382	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	507	Open in IMG/M
3300021433\|Ga0210391_10100720	All Organisms → cellular organisms → Bacteria	2278	Open in IMG/M
3300021475\|Ga0210392_10323052	All Organisms → cellular organisms → Bacteria	1111	Open in IMG/M
3300021479\|Ga0210410_10239079	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1628	Open in IMG/M
3300021559\|Ga0210409_11355418	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	587	Open in IMG/M
3300025898\|Ga0207692_10705365	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	655	Open in IMG/M
3300025905\|Ga0207685_10844380	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	507	Open in IMG/M
3300025906\|Ga0207699_10626087	All Organisms → cellular organisms → Bacteria	785	Open in IMG/M
3300025922\|Ga0207646_11705789	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	541	Open in IMG/M
3300025927\|Ga0207687_10563640	All Organisms → cellular organisms → Bacteria	957	Open in IMG/M
3300025928\|Ga0207700_10214862	All Organisms → cellular organisms → Bacteria	1627	Open in IMG/M
3300025986\|Ga0207658_10958173	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	780	Open in IMG/M
3300026318\|Ga0209471_1320893	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	513	Open in IMG/M
3300026555\|Ga0179593_1192314	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2863	Open in IMG/M
3300026557\|Ga0179587_10322389	All Organisms → cellular organisms → Bacteria	999	Open in IMG/M
3300026557\|Ga0179587_10450399	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	842	Open in IMG/M
3300026557\|Ga0179587_10912491	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	579	Open in IMG/M
3300027562\|Ga0209735_1033346	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1084	Open in IMG/M
3300027635\|Ga0209625_1124377	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	578	Open in IMG/M
3300027671\|Ga0209588_1137289	All Organisms → cellular organisms → Bacteria	778	Open in IMG/M
3300027738\|Ga0208989_10248086	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	581	Open in IMG/M
3300027867\|Ga0209167_10130071	All Organisms → cellular organisms → Bacteria	1309	Open in IMG/M
3300027875\|Ga0209283_10924320	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	526	Open in IMG/M
3300028047\|Ga0209526_10555816	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	741	Open in IMG/M
3300028536\|Ga0137415_10268008	All Organisms → cellular organisms → Bacteria	1514	Open in IMG/M
3300028906\|Ga0308309_10020456	All Organisms → cellular organisms → Bacteria	4355	Open in IMG/M
3300028906\|Ga0308309_10403747	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1172	Open in IMG/M
3300029636\|Ga0222749_10041303	All Organisms → cellular organisms → Bacteria	2003	Open in IMG/M
3300029636\|Ga0222749_10735220	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	540	Open in IMG/M
3300030991\|Ga0073994_10048078	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophobacteraceae → Desulfacinum → Desulfacinum hydrothermale	2501	Open in IMG/M
3300031057\|Ga0170834_100661305	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	589	Open in IMG/M
3300031057\|Ga0170834_111190344	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	614	Open in IMG/M
3300031715\|Ga0307476_11266549	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	539	Open in IMG/M
3300031720\|Ga0307469_10428595	All Organisms → cellular organisms → Bacteria	1138	Open in IMG/M
3300031720\|Ga0307469_12356231	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	519	Open in IMG/M
3300031740\|Ga0307468_100268405	All Organisms → cellular organisms → Bacteria	1214	Open in IMG/M
3300031820\|Ga0307473_10382649	All Organisms → cellular organisms → Bacteria	916	Open in IMG/M
3300032174\|Ga0307470_10585952	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	831	Open in IMG/M
3300032180\|Ga0307471_101040041	All Organisms → cellular organisms → Bacteria	985	Open in IMG/M
3300032180\|Ga0307471_101605547	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	806	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	87.85%
Host-Associated	Host-Associated	12.15%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	87.85%
Plants	Host-Associated → Plants	12.15%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	87.85%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.54%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.67%
Roots	Host-Associated → Plants → Roots	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	66.36%
Loam	Environmental → Terrestrial → Soil → Loam	21.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.67%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.74%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.87%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.93%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	32.71%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	28.97%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.21%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.28%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.74%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.87%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.93%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.93%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	28.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	19.63%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	9.35%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	7.48%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	7.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.74%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.74%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.87%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.87%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.87%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.93%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.93%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.93%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.93%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009092	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027562	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027635	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027738	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M1 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030991	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12630J15595_101013961	3300001545	Forest Soil	MKRSVVWLLLSYSILGLTGIPVRAQETVPERQTLVVQPGNDFRAALEKGVRLKSVGQPITAKLLEPVYAGEALAVPAGSTIKGHVSAISTAPHKRVGRLLSGDFTPPKMAHVTFDQLVLSDGTTVPIHSDSAVGLGRVANSKYLPKAERPGVGQKLKGAMAPLREPHKMQRLGEAV
JGI12635J15846_106522722	3300001593	Forest Soil	MSMKNRDVSNVKRRLVWILLFHSVLGLRGIPVRAHDTRSEEKALVVEPGNDVRAALDKGVRLKAVGQPVTAKLLEPVYAGEDLALPAGSTIKGHVSSITTVPMRKRTGRLLAGDFTPPKTAHVTFDQLVLS
JGIcombinedJ26739_1003096522	3300002245	Forest Soil	MKRSVVLALLSYSVLGLTGIPVRAQETSVEKKTLVVEPGYDFRAALEKGVRLKAPGQPITAKLLEPVYAGEDLAIPAGSTIKGHVSAISTTPMRKRAGRLLSGDFTPPKTAHVTFDQLVLSDGTTVPIHSDSAVGLGRVANSRYLPKAQRPGVRQKLRGAMAPLR
JGIcombinedJ26739_1007481742	3300002245	Forest Soil	MKRSVVLVLLSYSVLGLTAIPVRAQETSSEKKTLVIEPGNDFRAALEKGVRLKAPGQPITARLLEPVYAGEDVAIPAGSTIKGHVSAISTAPMRKRTGRLLAGDFTPPKTAHVTFDQLVLSDGTTVPIHSDSAVGLGRVANSQYLPKEQRPGMRQKLKGAMAPLREPNKL
Ga0066679_107170271	3300005176	Soil	MKNRNVPNMKHGLVWILLLHSVLGLTGIPVRAQDTRSEEKALVVVPGNDFRAALDKGVRLKAVGQPITAKLLEPVYAGEDLALPAGSTIKGHVSSITTDPMRKRAGRLLAGDFTPPKTAHVTFDQLVLSDGTTVSINSDSAVGLGRVANSRYLSKAQRPGMRQKLKGAMAPLREPNKLQRLGEAVVT
Ga0065712_104859712	3300005290	Miscanthus Rhizosphere	MSMKNRDVSNMKRRLVWILLFHSVLGLTGIPVRAQDTRSEEKALVVEPGNDFRAALEKGVRLKAVGQPITAKLLEPVYAGEDLALPAGSTIKGHVSSITTAPMRRRAGRLLAGDFTPPKTAQVTFDQLVLSDGTTVPIHSDTTVG
Ga0070689_1009764481	3300005340	Switchgrass Rhizosphere	MSMKNRDVSNMKRRLVWILLFHSVLGLTGIPVRAQDTRSEEKALVVEPGNDFRAALEKGVRLRAVGQPITAKLLEPVYAGEDLALPAGSTIKGHVSSITTAPMRRRAGRLLAGDFTPPKTAQVTFDQLVLSDGTTVPIHSDTAVGLGRVANSRYLPKAQRPGMRQKLKGAMAPLREPNKLQRLGEAVVTSLPYHPEYLDQGTVF
Ga0070667_1013903271	3300005367	Switchgrass Rhizosphere	MSMKNRDVSNMKRRLVWILLFHSVLGLTGIPVRAQDTRSEEKALVVEPGNDFRAALEKGVRLKAVGQPITAKLLEPVYAGEDLALPAGSTIKGHVSSITTAPMRRRAGRLLAGDFTPPKTAQVTFDQLVLSDGTTVPIHSDTTVGLGRVA
Ga0070713_1003654202	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MKNRNVSNLKHGLVWILLLHSVLGLTGIPVRAQDTRSEEKALVVVPGNDFRAALDKGVRLKTVGQPITAKLLEPVYAGEDLALPAGSTIKGHVSSITTDPMRKRAGRLLAGDFTPTKTAHVTFDQLLLSDGTTVSIHSDSAVGLGRVANSRYLSKAQRPGMRQELKNAMAPLREPNKLQRLGEAVVTSLPYHP
Ga0070708_1016720761	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MSMKNRNVSSMKRRLVLILLFHSVFGQMAMPVWAQETAFENETLVLVRGNDFRAALDKGVRLKGVGQPVSAKLLEPVYAGEDLALPAGSTIKGHVSSIATTPMRKRAGRLLAGDFTPPKTAHVTFDQLVLSDGTTVPIHSDSAAALGSVANSQYLPKSQRPGFREKLKTALAPLGGP
Ga0070699_1011386031	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MKRSVVWILLSCSVLGLTGIPVCAQEAKPERETLVVEPGNDFRAALEKGVRLKAVGQPITAKLLEPVYAGEVLAIPAGSTIKGHVSAISKAPRGKRARRLLDGDLTPPKTAHVTFDQLVLSDGTTVPI
Ga0066670_103025322	3300005560	Soil	MKRTEVWILLSFSVIGLAGISVRAQDTKPEKETVVVESGNDLRAALEKGVRLKAPGQPITAKLLEPVYAGETLAIPAGSTIKGHVSAISKAPNGKRALRLLDGDLTPPKMAHVTFDQLVLSDGTTVPIHSDSAVGIGRVANSKYLPKSQRPGMRQKFKDAMAPLREPNKLQRLGQVVITSLPY
Ga0068855_1015197722	3300005563	Corn Rhizosphere	MSMKNRDVSNMKRRLVWILLFHSVLGLTGIPVRAQDTRSEEKALVVEPGNDFRAALEKGVRLRAVGQPITAKLLEPVYAGEDLALPAGSTIKGHVSSITTAPMRRRAGRLLAGDFTPPKTAQVTFDQLV
Ga0070762_100054909	3300005602	Soil	MSMKNRDVSSMKRRLVLILLFHSVFGQMAMPVWAQETAFEKETLVLVRGNDFRAALDKGVRLKGVGQPVAAKLLEPVYAGEDLALPAGSTIKGHVSSIATTPMRKRAGRLLAGDFTPPKTARVTFDQLVLSDGTTVPIHSDSAAALGSVANSQYLPKSQRPGFREKLKTALAPLGGPNKLQRLGEAVVTSLPYHP
Ga0068856_1023476211	3300005614	Corn Rhizosphere	DVSNMKRRLVWILLFHSVLGLTGIPVRAQDTRSEEKALVVEPGNDFRAALEKGVRLKAVGQPITAKLLEPVYAGEDLALPAGSTIKGHVSSITTAPMRRRAGRLLAGDFTPPKTAQVTFDQLVLSDGTTVPIHSDTTVGLGRVANSRYLPKAQRPGMRQKLKGAMDPLREPNKLQRLGEA
Ga0068852_1024588901	3300005616	Corn Rhizosphere	MSMKNRDVSNMKRRLVWILLFHSVLGLTGIPVRAQDTRSEEKALVVEPGNDFRAALEKGVRLRAVGQPITAKLLEPVYAGEDLALPAGSTIKGHVSSITTAPMRRRAGRLLAGDFTPPKTAQVTFDQLVLSDGTTVPIHSDTTVG
Ga0068858_1007542281	3300005842	Switchgrass Rhizosphere	MSMKNRDVSNMKRRLVWILLFHSVLGLTGIPVRAQDTRSEEKALVVEPGNDFRAALEKGVRLKAVGQPITAKLLEPVYAGEDLALPAGSTIKGHVSSITTAPMRRRAGRLLAGDFTPPKTAQVTFDQLVLSDGTTVPIHSDTTVGLGRVANSRYLP
Ga0070717_100185571	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MSMKNRNVPNLKHGLVWILLLHSVLGLTGIPVRAQDTRSEEKALVVVPGNDFRAALDKGVRLKAVGQPITAKLLEPVYAGEDLALPAGSTIKGHVSSITTEPMRKRAGRLLAGDFTPPKTAHV
Ga0066651_107015671	3300006031	Soil	RTEVRILLSFSVIGLAGISVRAQDTKPEKETVVVESGNDLRAALEKGVRLKAPGQPITAKLLEPVYAGETLAIPAGSTIKGHVSAISKAPNGKRALRLLDGDLTPPKMAHVTFDQLVLSDGTTVPIHSDSAVGIGRVANSKYLPKSQRPGMRQKFKDAMAPLREPNKLQRLGQVVITSLP
Ga0070712_1002245131	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MSMKNRNAPNMKHGLVWILLLHSVLGLSGIPVSAQDTRSEEKALVVVPGNDFRAALEKGVRLKAVGQPITAKLLEPVYAGEDLALPAGSTIKGHVSSITTDPMRRRAGRLLAGDFTPPKTAHVTFDQLLLSDGTTVSIHSDSAVGLGRVANSRYLSKAQRPG
Ga0070765_1000030253	3300006176	Soil	MSMKNRDVSSMKRRLVLILLFHSVFGQMAMPVWAQETAFEKETLVLVRGNDFRAALDKGVRLKGVGQPVAAKLLEPVYAGEDLALPAGSTIKGHVSSIATTPMRKRAGRLLAGDFTPPKTARVTFDQLVLSDGTTVPIHSDSAAALGSVANSQYLPKSQRPGFREKLKTALAPLGGPNKLQRLGEAVVTSLPYHPNSSIKEPSLTRPCLNRSRYARRFSLIR*
Ga0068871_1013867982	3300006358	Miscanthus Rhizosphere	MSMKNRDVSNMKRRLVWILLFHSVLGLTGIPVRAQDTRSEEKALVVEPGNDFRAALEKGVRLKAVGQPITAKLLEPVYAGEDLALPAGSTIKGHVSSITTAPMRRRAGRLLAGDFTPPKTAQVTFDQLVLSDGTTVPIHSDTAVGLGRVANSRYL
Ga0075434_1012252281	3300006871	Populus Rhizosphere	MSMKNRDASNMKRRLVWILLFHSALGLTGIPARAQDTRSEEKALVVEPGNDFRAALDKGVRLKAVGQPITAKLLEPVYAGEDLAFPAGSTIKGRVSSITTVPMHRRAGRLLAGDFTPPKTAQVTFDQLVLSDGTTVPIHGDTAVGLGRVANSRYLPKAQRPGMRQKLKGAMDPLREPNKLQRLGEAVVTSLP
Ga0075435_1015749841	3300007076	Populus Rhizosphere	KMSMKNRDASNMKRRLVWILLFHSALGLTGIPARAQDTRSEEKALVVEPGNDFRAALDKGVRLKAVGQPITAKLLEPVYAGEDLAFPAGSTIKGRVSSITTVPMHRRAGRLLAGDFTPPKTAQVTFDQLVLSDGTTVPIHGDTAVGLGRVANSRYLPKAQRPGMRQKLKSAMAPLREPNRLQRLGEAVVTSL
Ga0099793_101315841	3300007258	Vadose Zone Soil	MKRSVVLLLLSYSVLGLTAISVRAQETTPERKSLVIEPGNDFRAALEKGVRLKAAGQPITARLLEPVYAGEDLAIPAGSTIKGHVSSISKAPMRKRAGRLLAGDFTPPKTANVTFDQIVLSDGTTVPIHSDSSIGIGRVANSQYVPKAQRPGMRQKLKGAMAPLREPNKLQRLGQAVVTSLPYHPEYID
Ga0099828_100522561	3300009089	Vadose Zone Soil	MKRSVVLLLLSYSVLGPTAIPVRAQETTPERKSLVIEPGNDFRAALEKGVRLKSAGQPITAKLLEPVYAGEDLAIPAGSTIKGHVSSISKAPMRKRAGRLLAGDFTPPKTANVTFDQIVLSDGTTVPIQSDSSIGIGRVANSQYLPKAQRPGMRQKLKGAMAPLREPNKLQRLGQAVVTSLP
Ga0105250_101621532	3300009092	Switchgrass Rhizosphere	MSMKNRDVSNMKRRLVWILLFHSVLGLTGIPVRAQDTRSEEKALVVEPGNDFRAALEKGVRLKAVGQPITAKLLEPVYAGEDLALPAGSTIKGHVSSITTAPMRRRAGSLLAGDFTPPKTAQVTFDQLVLSDGTTVPIHSDTTVGLGRVANSRYLPKAQRPGMRQKLKGAMAPLREPNKLQRLGEAVVTSLPYHPE
Ga0105245_107227102	3300009098	Miscanthus Rhizosphere	MSMKNRDVSNMKRRLVWILLFHSVLGLTGIPVRAQDTRSEEKALVVEPGNDFRAALEKGVRLKAVGQPITAKLLEPVYAGEDLALPAGSTIKGHVSSITTAPMRRRAGRLLAGDFTPPKTAQVTFDQLVLSDGTTVPIHSDTAVGLGRVANSRYLPKAQRPGMRQKLKGAMAPLRE
Ga0099792_103895471	3300009143	Vadose Zone Soil	MKRSVVLVLLSYSVLSLTAVPVRAQETGPERKSLVVQPGNDFRATLEKGVRLKSAGQPITGRLLEPVYAGEDLAIPAGYTIKGHVSSISTTPMRKRAGRLLSGDFTPPKTAHVTFDQIVLSDGTTVPIHSDSAVGIGRVASSRYLPKAERPGMRKKLKGAMAPLREPNKMQRLGEAV
Ga0099796_101501311	3300010159	Vadose Zone Soil	MKRSVVLLLLSYSVLGFTAISMRAQETTPERKSLVIEPGNDFRAALEKGVRLKAAGQPITAKLLEPVYAGEDLAIPAGSTIKGHVSSIITAPMRKRAGRLLAGDFTPPKTANVTFDQIVLSDGTTVPIHS
Ga0134123_101084052	3300010403	Terrestrial Soil	MSMKNRDVSNMKRRLVWILLFHSVLGLTGIPVRAQDTRSEEKALVVEPGNDFRAALEKGVRLKAVGQPITAKLLEPVYAGEDLALPAGSTIKGHVSSITTAPMRRRAGRLLAGDFTPPKTAQVTFDQLVLSDGTTVPIHSDTTVGLGRVANSRYLPKAQRPGMRQKLKGAMAPL*
Ga0137399_116275821	3300012203	Vadose Zone Soil	MKRNVVWILLSYSVLSLTSIPVRAQETKPETKTLVVEPGNDFRAALEKGVRLKSPGQPITAKLLESVYAGEDLAIPAGSTIKGHVSAISTAPMRKRAGRLLAGDFTPPKTAHVIFDQLVLADGT
Ga0137360_104688522	3300012361	Vadose Zone Soil	VHAQETRPAKETLVVEPGNDFRAALEKGTRLKAPGQPITAKLLEPVYAGEALAIPAGSTIKGHVSAISTTPIRKRAGRLLAGDFTPPKTAHVTFDQLVLSDGTTVPIHSDSCVGLGRVANSQYLPKAQRPGVRHKLKGTMAPLREPNKLQRLGQAVVTNLSYHPEYIDQGTVFDTALLEPVTLL
Ga0137358_100767481	3300012582	Vadose Zone Soil	MKRSVVLVLLSYSVLSLTAVPVRAQETGPERKSLVVEPGNDFRAALEKGVRLKSAGQPITARLLEPVYAGEDLAIPAGSTIKGHVSSISTAPMRKRAGRLLSGDFTPPKTAHVTFDQIVLSDGTTVPIHSDSAVGIGRVASSRYLPKAERPGMRKKLKGAMAPLREPNKMQRL
Ga0137358_101598051	3300012582	Vadose Zone Soil	MKRSVVWILLSYSVLGLTGSPVRAQETRSEGKTLVVEPGNDFRAALEKGVRLKAPGQPITARLLEPVYAGEDLAIPAGSTIKGHVSSISTAPMRKRAGRLLAGDFTPPKTAHVTFDQL
Ga0137358_108158491	3300012582	Vadose Zone Soil	MKRSVVLVLLSYSVFGQMAMPVWAQETALEKKTVVLVPGNDFRAALDKGVRLKDVGQPITAKLLEAVYAGEDLALPAGSTIKGHVSSITTTPMRQRAGRLLAGDFTPPKTAHVTFDQLVLSDGTTVPIHSDTAVGLGRVANSRYLLKAQRPGMRQKLKGAMAPLREPN
Ga0137398_102975682	3300012683	Vadose Zone Soil	MSMKNRDVSNTKGRLVWILLFHSALGLTGIPVHAQDTRSEEKALVVEPGNDFRAALDKGVRLKAVGQPISAKLLEPVYAGEDLALPAGSIINGHVSSITTAPMRKRAGRLLAGDFTPPKTAHVTFDQLMLSDGTTVPIHSDSAVGLGRVANSRYLPKAQRPGMRQKLKGAMAPLREPNKLQRLGEAVVTSLPYHPE
Ga0137397_105527061	3300012685	Vadose Zone Soil	MAMPVWAQETALDKETLVLVRGNDFRAALDKGVRLKAVGQPVTAKLLEPVYAGEDLALPAGSMIKGHVSSITTAPMRKRAGRLLAGDFTPPKTAHVTFDQLVLSDGTTVSIHSDSAAGLGRVANSQYLPKSQRPGFRKKIKTAMAPLGGPNKLQRLGEAIVTSLPYHPEFIDQGTVFDAALL
Ga0137395_102422962	3300012917	Vadose Zone Soil	MKRSVVLVLLSYSVLTAVPVRAQETGPERKSLVVQPGNDFRAALEKGVRLKSAGPPITARLLEPVYAGEDLAIPAGSTIKGHVSSISTTPMRKRAGRLLSGDFTPPKTAHVTFDQIVLSDGTTVPIHSDSAVGIGRVASSRYLP
Ga0137395_110150751	3300012917	Vadose Zone Soil	MKRSVVLVLLSYSVLGLTAVPVRAQETGPERKSLVVEPGNDFRAALEKGVRLKSAGQPITARLLEPVYAGEDLAIPAGSAIKGHVSSISTAPMRKRAGRLLSGDFTPPKTAHVTFEQVVLSDGTTVPIHSDSAVGIGRVASSRYL
Ga0137396_102131721	3300012918	Vadose Zone Soil	MKRSVVWTLLSYSVLGLTGTPVHAQETRPAKETLVVEPGNDFRAALEKGTRLKAPGQPITAKLLEPVYAGEVLAIPAGSTIKGHVSAISTTPIRKRAGRLLAGDFTPPKTAHVTFDQLVLSDGTTVPIHSDSCVGLGRVANSQYLPKAQRPGVRHKLKGTMAPL
Ga0137359_117370531	3300012923	Vadose Zone Soil	MKRSVVLLLLSYSVLGLTAISVRAQETTPERKSLVIEPGNDFRAALEKGVRLKAAGQPITAKLLEPVYAGEDLAIPAGSTIKGHVSSISKAPMRKRAGRLLAGDFTPPKTANVTFDQIVLSDGTTVPI
Ga0137413_100876993	3300012924	Vadose Zone Soil	MSMKNRDVSNTKGRLVWILLFHSALGLTGIPVHAQDTRSEEKALVVEPGNDFRAALDKGVRLKAVGQPISAKLLEPVYAGEDLALPAGSIINGHVSSITTAPMRKRAGRLLAGDFTPPKTAHVTFDQLMLSDGTTVPIHSDSAVGLGRVANSRYLPKAQRP
Ga0137419_104767331	3300012925	Vadose Zone Soil	MKRSVVLLLLSYSVLGLTAISVRAQETTPERKSLVIEPGNDFRAALEKGVRLKAAGQPITAKLLEPVYAGEDLAIPAGSTIKGHVSSISKAPMRRRAGRLLAGDFTPPKTANVTFDQIVLSDGTTIPIHSDSSIGIGRVANSQYLPKAQRPGMRQKLKGAMAPLREPNKLQRLGQAVVTSLPYHPEYIDQG
Ga0137419_105362531	3300012925	Vadose Zone Soil	MKRSVVLVLLSYSVLGLTAVPVRAQETGPERKSLVVQPGNDFRATLEKGVRLKSAGQPITARLLEPVYAGEDLAIPAGSTIKGHVSSISTAPMRKRAGRLLSGDFTPPKTAHVTFDQIVLSDGTTVPIHSDSAVGIGRVASSRYLPKAERPGMRKKLKGAMAPLREPNKMQRLGE
Ga0137416_103166051	3300012927	Vadose Zone Soil	MKRSVLLLLLSYSTLGLTAIPVRAQETTPERKSLVIEPGNDFRAALEKGVRLKSAGQPITARLLEPVYAGEDLAIPAGSTIKGHVSSISKAPMHKRAGRLLAGDFTPPKTANVTFDEIVLSDGTTVPIHSDSAIGLGRVTNSK
Ga0137404_122528701	3300012929	Vadose Zone Soil	MKRSVVLLLLSYSVLGFTAISMRAQETTPERKSLVIEPGNDFRAALEKGVRLKSAGQPITARLLEPVYAGEDLAIPAGSTIKGHVSSISKAPMRKRAGRLLAGDFTPPKTANVTFDQIVLSDG
Ga0164305_108680411	3300012989	Soil	MSMKNRDVSNMKRRLVWILLFHSVLGLTGIPLRAQDTRSEEKALIVEPGNDFRAALDKGVRLKAVGQTITAKLLEPIYAGEDLALPAGSTIKGHVSSITTAPMRRRAGRLLAGDFTPPKTAQVTFDQLVLSDGTTVPIHSDTAVGLGRVANSRYLPKAQRPGIRQKLKGAMAPLREPNKLQRLGEAVVTSLPYHPEYLDQ
Ga0137420_13804773	3300015054	Vadose Zone Soil	VRAQETTPERKSLVIESGNDFRAALEKGVRLKAAGQPITAKLLEPVYAGEDLAIPAGSTIKGHVSSVSKAPMRKRAGRLLAGDFTPPKTANVTFDQIVLPDGTTVPIHSDSSIGIGRVANSQYV
Ga0137418_103553481	3300015241	Vadose Zone Soil	MSMKNRDVSNTKGRLVWILLFHSALGLTGIPVHAQDTRSEEKALVVEPGNDFRAALDKGVRLKAVGQPISAKLLEPVYAGEDLALPAGSIINGHVSSITTAPMRKRAGRLLAGDFTPPKTAHVTFDQLMLSDGTTVPIHSDSAVGLGRAANSRYLPKAQRPGMRQKLKGAMAPLREPNKLQRLGEAVVTSL
Ga0066655_108197001	3300018431	Grasslands Soil	MKRTEVWILLSFSVIGLAGISVRAQDTKPEKETVVVESGNDLRAALEKGVRLKAPGQPITAKLLEPVYAGETLAIPAGSTIKGHVSAISKAPNGKRALRLLDGDLTPPKMAHVTFDQLVLSDGTTVPIHSDSAVG
Ga0179594_100875722	3300020170	Vadose Zone Soil	MSMKNRDVSNTKGRLVWILLFHSALGLTGIPVHAQDTRSEEKALVVEPGNDFRAALDKGVRLKAVGQPISAKLLEPVYAGEDLALPAGSIINGHVSSITTAPMRKRAGRLLAGDFTPPKTAHVTFDQLMLSDGTTVPIHSDSAVGLGRVANSRYLPKAQRPGM
Ga0179594_103161051	3300020170	Vadose Zone Soil	MKRSVVWTLLSYSVLGLTGTPVHAQETRPAKETLVVEPGNDFRAALEKGTRLKAPGQPITAKLLEPVYAGEVLAIPAGSTIKGHVSAISTTPIRKRAGRLLAGDFTPPKTAHVTFDQLVLSDGTTVPIHSDSCVGLGRVANSQYLPKAQRPGVRHKLKGTMAPLREPNKLQRLGQAVVTNLPYHPEYIDQGAVF
Ga0210407_110276821	3300020579	Soil	MSMKNREVPSMKRRLVWILLFHSVFGQMAMPVWAQETALEKETLVLVRGNDFRAALDKGVRLKAVGQPVTAKLLEPVYAGEDLALPAGSTIKGHVSSITTAPMRKRAGRLLAGDFTPPKSAHVTFDQLVLSDGTTVPIHSDSAASLGRVANSQYLPKSQRPGLRKK
Ga0210407_110808391	3300020579	Soil	MKRSVVWILLSYSVLGLTGIPVRAQEAEPEKEALVVEPGNDFRAALEKGVRLKAVGQPITAKLLEPVYAGEVLAIPAGSTIKGHVSAISTAPHKRARRLLNGDLTPPKMAHVTFDQLVLSDGTTVPIHSDSAVGLGRVANSQYLPKAQRPGVRQKLKGAMAPLREPNKLQRLGEAVVTSLPYHPEFVDQGTVFDAA
Ga0210399_113271741	3300020581	Soil	NNRDVSSMKRRLVLILLFHSVFGQMAMPVWAQETALEKETLVLVPGNDFRAALDKGVRLKAVGQPVTAKLLEPVYAGEDLALPAGSTIKGHVSSITTAPMRKRAGRLLAGDFTPPKTAHVTFDQLVLSDGTTVPIHSDSAAGLGRVANSQYLPKSQRPGFRKKLKTAMAPLGGPNKLQRLGEAVVTSL
Ga0210395_108556282	3300020582	Soil	MSMKNRDVSKIKRRLVGILLFHSVFGQMAMPVSAQETALEKETLVLVPGNDFRAALDKGVRLKGVGQPVAAKLLEPVYAGEDLALPAGSTIKGHVSSIATTPMRKRAGRLLAGDFTPPKTAHVTFDQLVLSDGTTVPIHSDS
Ga0215015_106618992	3300021046	Soil	MSMKNRDVSNRKRRLVWILLSHSALGLTGIPVRAQDTRSEEKALVVESGNDFRAALEKGVRLKAIGQPISAKLLEPVYAGEALAIPAGSTVKGHVSAISTAPMRKRARRLLDGDFTPPRTAHVTFDQLVISDGTMVPIQSDSAVGLGRVGNSRYLPKAQRPGIRQKLKGAMAPLREPNNAAIGRSRRNQLA
Ga0210404_101178082	3300021088	Soil	MSMKNRDVSSMKRRLVLILLFHSVFGQMAMPVWAQETAFENETLVLVRGNDFRAALDKGVRLKGVGQPVAAKLLEPVYAGEDLALPAGSTIKGHVSSIATTPMRKRAGRLLAGDFTPPKTARVTFDQLVLSDGTTVPIHSDSAAALGSVAN
Ga0210404_103456981	3300021088	Soil	MSMKNRDVSNMKRRLVRVLLFHSILHSVLCLTGIPARAQDARSEEKALVVEPGNDFRAALEKGVRLKAVGQPITAKLLEPVYTGEDLAIPAGSTIKGHVSAISTAPMRKRTRRLLDGDFTPPKTAQVTFDQLVLSDGTMVPIHCDSAVSLGPVGNSRYLPKAQRPRMRQKLKGAM
Ga0210406_111859961	3300021168	Soil	MKRSFVCILFSYSILSLTSIPVSAQETRSETKTLVVGSGNDFRAVLEKGVRLKSVGQPITAKLLEPVYAGEILAIPEGSTIKGHVSAISKAPIRKRAGRLLDGDLTPPKTAHVTFDQLALAD
Ga0210406_112812321	3300021168	Soil	SGVKRRFVWILLSYSVLGLTAVPVRAQETTPERKSLVIESGNDFRAALEKGVRLKAAGQPITAKLLEPVYAGEELAIPAGSTIKGHVSSITTAPMRKRVGRLLAGDFTPPKTACVTFDQLVLSDGTTVPIRSDSAVGLGRVANSRYLPKAQRPGIRQKLKGAMAPLREPNKMQRLG
Ga0210400_104978461	3300021170	Soil	MKRSVVLVLLSCSVFGQMTMPVWAQETALEKKTVVLVPGNDFRAALDKGVRLKAVGQPVTAKLLEPVYAGEALALPAGSTIKGHVSSITTAPMRKRAGRLLAGDFTPPKTAHVTFDQLVLSDGTTVPIHSDSAVGLG
Ga0210400_106693621	3300021170	Soil	MSMKNRDVSSMKRRLVLILLFHSVFGQMAMPVWAQETAFEKETLVLVRGNDFRAALDKGVRLKGVGQPVAAKLLEPVYAGEDLALPAGSTIKGHVSSIATTPMRKRAGRLLAGDFTPPKTARVTFDQLVLSDGTTVPIHSDSAAALGSVANSQYLPKSQRPGFREKLKT
Ga0210400_108754501	3300021170	Soil	MSMKNRDVSSMKRRLAWVLLFHSVLGLTGIPMRAQDTRSEEKALVVEPGNDFRAALEKGVRLKAVGQPITAKLLEPVYTGEDLASPAGSTIKGHVSAISTAPMRKRTRRLLEGDFTPPKTAQVTFDQLVLSDGTMVPIH
Ga0210408_104791982	3300021178	Soil	MSMKNRDVSKIKRRLVGILLFHSVFGQMAMPVSAQETALEKETLVLVPGNDFRAALDKGVRLKAVGQPVTAKLLEPVYAGEDLALPAGSTIKGHVSSITTAPMRKRAGRLLAGDFTPPKTAHVTFDQLVLSDGTTVPIHSDSAAGLGRLANS
Ga0210396_102262791	3300021180	Soil	MKRSVVWILLSYSVLGLTGIPVRAQEAEPEKEALVVEPGNDFRAALEKGVRLKAVGQPITAKLLEPVYAGEVLAIPAGSTIKGHVSAISTAPHKRARRLLNGDLTPPKMAHVTFDQLVLSDGTTVPIHSDSAVGLGRVANSQYL
Ga0210384_118613821	3300021432	Soil	EDTMKRSVVWMLLSYLILGLTGIPVRAQETVPERQTLVVQPGNDFRAALEKGVRLKSVGQPITAKLLEPVYAGEALAVPAGSTIKGHVSAISTAPHKRVGRLLSGDFTPPKMAHVTFDQLVLSDGTTVPIHSDSAVGLGRVANSKYLPKAERPGVGQKLKGAMAPLREP
Ga0210391_101007204	3300021433	Soil	MSMKNRDVSSMKRRLVLILLFHSVFGQMAMPVWAQETAFEKETLVLVRGNDFRAALDKGVRLKGVGQPVAAKLLEPVYAGEDLALPAGSTIKGHVSSIATTPMRKRAGRLLAGDFTPPKTARVTFDQLVLSD
Ga0210392_103230521	3300021475	Soil	MSTKNREVSSMKRRLVWILLFHSVFGQMAMPVWAQETALEKETLVLVRGNDFRAALDKGVRLKAVGQPVTAKLLEPVYAGEDLALPAGSTIKGHVSSITTAPMRKRAGRLLAGDFTPPKSAHVTFDQLVLSDGTTVPIHSDSAAS
Ga0210410_102390792	3300021479	Soil	MSMKNRDVSKIKRRLVGILLFHSVFGQMAMPVSAQETALEKETLVLVPGNDFRAALDKGVRLKAVGQPVTAKLLEPVYAGEDLALPAGSTIKGHVSSITTAPMRKRAGRLLAGDFTPPKTAHVTFDQLVLSDGTTVPIHSDSAAGLGRVANSQYLPKSQRPGFRKKLKTAMAPL
Ga0210409_113554181	3300021559	Soil	MKRSVVWMLLSYSILGLTGIPVRAQETVPEWQTLVVQPGNDFRAALEKGVRLKSVGQPITAKLLEPVYAGEALAVPAGSTIKGHVSAISTAPHKRVGRLLSGDFTPPKMAHVTFDQLVLSDGTTVPIHSDSAVGLGRVANSKYLPKAERPGVGQKLKGAMAPLREPH
Ga0207692_107053651	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MKHSTVWVLISYSVLGLAAIPVHAQAKRPERKSLVVEPGNDLRAALEKGVRLKAVGQPVTAKLLEPVYAGEDLALPAGCTIKGHVSSIATTPMRKRAGRLLAGDFTPPKTAHVTFDQLVLSDGTMVPIHSDSAVGLSRVANSQYLPKAQRPGIRQKLKGAMAPLREPNKLQRLGEAVVT
Ga0207685_108443801	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	LVAIPVHAQETRPERKSLVVEPGNDLRTALEKGVRLKAVGQPVTAKLLEPVYAGEDLALPAGCTIKGHVSSIATTPMRKRAGRLLAGDFTPPKTAHVTFDQLVLSDGTTVPIHSDSAVGLGRVANSQYVPKAQRPGVRQKLKGAMAPLREPNKLQRLREALVTSLPYHP
Ga0207699_106260871	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MSMKNRDVSNMKCRLVWILLFHSVLGLTGIPLRAQDTRSEEKALVVEPGNDFRAALEKGVRLKAIGQPITAKLLEPVYAGEDLALPAGSTIKGHVSSITTVPMRRRAGRLLAGDFTPPKTAQVTFDQLVLSDGTTVPIHSDTTVGLGRVANSRYLPKAQRP
Ga0207646_117057891	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MKRSVVWILLSCSVLGLTAIPVCAQEAKPERETLVVEPGNDFRAALEKGVRLKAVGQPITAKLLEPVYAGEVLAIPAGSTIKGHVSAISKAPRGKRARRLLDGDLTPPKTAHVTFDQLVLSDGTTVPIQSDSAVGLGRVANSQYLPK
Ga0207687_105636402	3300025927	Miscanthus Rhizosphere	MSMKNRDVSNMKRRLVWILLFHSVLGLTGIPVRAQDTRSEEKALVVEPGNDFRAALEKGVRLKAVGQPITAKLLEPVYAGEDLALPAGSTIKGHVSSITTAPMRRRAGRLLAGDFTPPKTAQVTFDQLVLSDGTTVPIHSDTTVGLGRVANSRYLPKAQRPGMRQKLKGAMAPLRE
Ga0207700_102148622	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MSMKNRNVSSMKRRLVLILLFHSVFGQMAMPVWAQETAFEKETLVLVRGNDFRAALDKGVRLKAVGQPVTAKLLEPVYAGEDLALPAGCTIKGHVSSIATTPMRKRAGRLLAGDFTPPKTAHVTFDQLVLSDGTTVPIHSDSGAGLGSVANSQYLPKSQRPGFREKLKTAMAPLGGPNKLQRLGEAVVTSLPYHPEFIDQ
Ga0207658_109581731	3300025986	Switchgrass Rhizosphere	MSMKNRDVSNMKRRLVWILLFHSVLGLTGIPVRAQDTRSEEKALVVEPGNDFRAALEKGVRLKAVGQPITAKLLEPVYAGEDLALPAGSTIKGHVSSITTAPMRRRAGRLLAGDFTPPKTAQVTFDQLVLSDGTTVPIHSDTTVGLGRVANSRYLPKAQRPGMRQKLKGAMAPLREPNKLQRLGEAVVTSLPYHPEYLDQGTVFDTAL
Ga0209471_13208931	3300026318	Soil	MPMKNRNVPNMKHGLVWILLLHSVLGLTGIPVRAQDTRSEEKALVVVPGNDFRAALDKGVRLKAVGQPITAKLLEPVYAGEDLALPAGSTIKGHVSSITTDPMRKRAGRLLAGDFTPPKTAHVTFDQLVLSDGTTVSINSDSAVGLGRVANSRYLSKA
Ga0179593_11923142	3300026555	Vadose Zone Soil	MSTKNRDGSNMKRRLVWILLFHSVLGPMGIPARAQETGSEKETLVVERGNDLRAVLDKGVRLKSVGQPVTAKLLEPVYAGEDLALPAGSTIKGHVSSITTAPMRKRAGRLLDGDFTPPKTAHVAFDQLVLSDGTTVPIHSDTAVGLGRVENSKYLPKAQRPGMRQNSRTLWPPCENRISCSDWAKPS
Ga0179587_103223892	3300026557	Vadose Zone Soil	MKRSVVLVLLSYSVLSLTAVPVRAQETGPERKSLVVEPGNDFRAALEKGVRLKSAGQPITARLLEPVYAGEDLAIPAGSTIKGHVSSISTAPMRKRAGRLLSGDFTPPKTAHVTFDQIVLSDGTTVPIHSDSAVGIGRVASSRYLPKAERPGIRKKLKG
Ga0179587_104503992	3300026557	Vadose Zone Soil	MKRSVVWTLLSYSVLGLTGTPVHAQETRPAKETLVVEPGNDFRAALEKGTRLKAPGQPITAKLLEPVYAGEVLAIPAGSTIKGHVSAISTTPIRKRAGRLLAGDFTPPKTAHVTFDQLVLSDGTTVPIHSDSCVGLGRVANSQYLPKTQRPGVRHKLKGTMAPL
Ga0179587_109124911	3300026557	Vadose Zone Soil	MSMKNRDVSNTKGRLVWILLFHSALGLTGIPVHAQDTRSEEKALVVEPGNDFRAALDKGVRLKAVGQPISAKLLEPVYAGEDLALPAGSIINGHVSSITTAPMRKRAGRLLAGDFAPPKTAHVTFDQLVLSDGTTVPIHSDSAVSLGRVANSRYLPK
Ga0209735_10333462	3300027562	Forest Soil	MKRNVVWILLSCSVLGLTGIPVRAQETKPERETLVVEPGNDFRAALEKGVRLKAVGQPITAKLLEPVYAGEVLAIPAGSTIKGHVSSISKVPKRQRVGRLLDGDLTPPKTAHVTFDQLVLSDGTTVPIHSDSAVGLGSVANSRYLPKAQRPGMRQKLKGAMAPLREPGIGILHDDRQFDRSRWDAIPA
Ga0209625_11243771	3300027635	Forest Soil	MKRSVVWIVLSYSVLSLTSISVRAQETKLETKTLVVEPGNDFRAALEKGVRLKAPGQPITAKLLEPVYAGEDLAIPAASTIKGHVSAISNAPMRKRAGRLLAGDFTPPKTAHVTFDQLVLSDGTTVPIHSDSAVGIGRVANSRYLPKAQRPGIRQKLKGATAPLHEPNKLQRLGKAVVTSLPYH
Ga0209588_11372892	3300027671	Vadose Zone Soil	MKRSVLLLLLSYSTLGLTAIPVRAQETTPERKSLVIEPGNDFRAALEKGVRLKSAGQPITARLLEPVYAGEDLAIPAGSTIKGHVSSISKAPMRKRAGRLLAGDFTPPKTANVTFDQIVLSDGTTVPIHSDSAIG
Ga0208989_102480861	3300027738	Forest Soil	MKRSVVLVLLSYSVLGLTAIPVRAQEIGPERKSLVVEPGNDFRAALEKGVRLKAVGQPVTAKLLEPVYAGEDLALPAGATIKGHVSSITTAPMRKRAGRLLAGDFTPPKTAYVTFDQLVLSDGTTVPIHSDSAVGLGRV
Ga0209167_101300714	3300027867	Surface Soil	MSMKNRDVSNMKRRLVWVLLFHSILHSVLCLTGIPARAQDARSEEKALVVEPGNDFRAALEKGVRLKAVGQPITAKLLEPVYTGEDLAIPVGSTIKGHVSAISTAPMRKRTRRLLDGDFTPPKTAQVTFDQLVLSDGTMVPIHCDSAVSLGRVANSRYLPKAQRPGMRQKPQGRYGPVAGTE
Ga0209283_109243201	3300027875	Vadose Zone Soil	LLSYSVLGPTAIPVRAQETTPERKSLVIEPGNDFRAALEKGVRLKSAGQPITAKLLEPVYAGEDLPIPAGSTIKGHVSSISKAPMRKRAGRLLAGDFTPPKTANVTFDQIVLSDGTTVPIHSDSSIGIGRVANSQYLPKAQRPGMRQKLKGAMAPLREPNKLQRLGQAVVTSLP
Ga0209526_105558161	3300028047	Forest Soil	MKRSVVLALLSYSVLGLTGIPVRAQETSVEKKTLVVEPGYDFRAALEKGVRLKAPGQPITAKLLEPVYAGEDLAIPAGSTIKGHVSAISTTPMRKRAGRLLSGDFTPPKTAHVTFDQLVLSDGTTVPIHSDSAVGLGRVANS
Ga0137415_102680081	3300028536	Vadose Zone Soil	MKRSVLLLLLSYSTLGLTAIPVRAQETTPERKSLVIEPGNDFRAALEKGVRLKSAGQPITARLLEPVYAGEDLAIPAGSTIKGHVSSISKAPMRKRAGRLLAGDFTPPKTANVTFDQIVLSD
Ga0308309_100204563	3300028906	Soil	MSMKNRDVSSMKRRLVLILLFHSVFGQMAMPVWAQETAFEKETLVLVRGNDFRAALDKGVRLKGVGQPVAAKLLEPVYAGEDLALPAGSTIKGHVSSIATTPMRKRAGRLLAGDFTPPKTARVTFDQLVLSDGTTVPIHSDSAAALGSVANSQYLPKSQRPGFREKLKTALAPLGGPNKLQRLGEAVVTSLPYHPNSSIKEPSLTRPCLNRSRYARRFSLIR
Ga0308309_104037472	3300028906	Soil	MKRSVVWMVLSYSILGLTGIPVRAQETVPERQTLVVQPGNDFRAALEKGVRLKSVGQPITAKLLEPVYAGEALAVPAGSTIKGHVSAISTAPHKRVGRLLSGDFTPPKMAHVTFDQLVLSDGTTVPIHSDSAVGLGRVANSKYLPKAERPGVGQKLKGTMAPL
Ga0222749_100413033	3300029636	Soil	MAMPVSAQETALEKETLVLVPGNDFRAALDKGVRLKAVGQPVTAKLLEPVYAGEDLALPAGSTIKGHVSSITTAPMRKRAGRLLAGDFTPPKTAHVTFDQLVLSDGTTVPIHSDSAAGLGRVANSQYLPKSQRPGFRKKLKTAMAPLGG
Ga0222749_107352201	3300029636	Soil	MKLSLVWILLSYSVLGLTGIPVRAQETRIEKETLVVEPGNDFRAALEKGVRLKAVGQPITAKLLEPVYAGEALAVPAGSTIKGHVSAISTAPHKRVGRLLSGDFTPPKMAHVTFDQLVLSDGTTVP
Ga0073994_100480781	3300030991	Soil	MKRSVVLVLLSYSVLGLTAIPVRAQETSSEKKTLVIEPGNDFRAALEKGVRLKAPGQPITARLLEPVYAGEDVAIPAGSTIKGHVSAISTAPMRKRAGRLLAGDFTPPKTAHVTFDQLVLSDGTTVPIHSDSAVGLGRVANSRYLPK
Ga0170834_1006613052	3300031057	Forest Soil	MSMKNRDVSSMKRRLVWILLFHSVFGQMAMPVWAQETALDKETLVLVRGNDFRAALDKGVRLKAVGQPVTAKLLEPVYAGEDLALPAGSTIKGHVSSITTAPMRKRAGRLLAGDFTPPKTAHVTFDQLVLSDGTTVPIHSDSAAGLGRAANSQYLPKSQRPGFRKK
Ga0170834_1111903441	3300031057	Forest Soil	MSMKNRDVSNIKRRLVWILFFHSVLGLTGIPVRAQDTRSEEKALVVEPGNDFRAALDKGVRLKAVGQPVTAKLLEPVYAGENLALPAGSTIMGHVSSISTVPIRNRTGRLLAGDFTPPKMAHVTFDQLV
Ga0307476_112665491	3300031715	Hardwood Forest Soil	MKRSVVWILLSYSLLGLTGIPAGAQGTRTEKETLVVEPGSDFRAALEKGVRLKAVGQPITAKLLEPVYAGEDLVLPAGSTIKGHVSSITTAPMRKRAGRLLAGDFTPPKTAHVTFDQLLLSDGTTVPIHSDSTVGLGRVANSRYLSKAQHPGM
Ga0307469_104285951	3300031720	Hardwood Forest Soil	MSMKNRNVSSMKRRLVWILLFHSVFGQMAMPVWAQGAALEKETLVLVRGKDFRAALDKGVRLKAVGQPVTAKLLEPVYAGEDLALPAGSMINGHVSSITTAPMRKRAGRLLAGDFTPPKTAHVTFDQLVLSDGTTVPIHSDSSAGLGRVANS
Ga0307469_123562311	3300031720	Hardwood Forest Soil	TTKLSMKNRDVSSMKGRLVLILLFHSVFGQMAMPVWAQETAFEKETLVLVRGNDFRAALDKGVRLKGVGQPVTAKLLEPVYAGEDLALPAGSTIKGHVSSIATTPMRKRAGRLLAGDFTPPKTAQVTFDQLVLSDGTTVPIHSDSGAGLGSVANSQYLPKSRRPGFREKLKTA
Ga0307468_1002684051	3300031740	Hardwood Forest Soil	MSMKNRDVSSMKRKLVWILLFHSVLGLTGIPVRAQDTRSEEKALVVEPGNDFRAALDKGVRLKAVGQPVTAKLLEPVYAGEDLALAAGSTIKGHVSSITPAPMHKRAGRLLAGDFTPPKTAHVTFDQLVLSDGT
Ga0307473_103826492	3300031820	Hardwood Forest Soil	MSMKNRDVSSMKGRLVLILLFHSVFGQMAMPVWAQKTAFEKETLVLVRGNDFRAALDKGVRLKGVGQPVTAKLLEPVYAGEDLALPAGSTIKGHVSSIATTPMRKRAGRLLAGDFTPPKTAQVTFDQLVLSDGTTVPIHSDSGAGLGSVANSQYLPKSRRPGFREKLKTAM
Ga0307470_105859521	3300032174	Hardwood Forest Soil	MSMKNRDVSNMKRRLVWILLFHSVLGLTGIPLRAQDTRPEEKALIVEPGNDFRAALDKGVRLKAVGQTITAKLLEPIYAGEDLALPAGATIKGHVSSITTVPMRRRAGRLLAGDFTPPKTAQVTFDQLVLSDGTTVPIHSDTAVGLGRVANSRYLPKAQRPGMRQKLKGAMAPLREPNKLQRLGEAVVTSLPYHPEYLDQGTIF
Ga0307471_1010400411	3300032180	Hardwood Forest Soil	VPMKNRDVSGMKRRFVWILLSYSVLGLTAVPVRAQETTPERKSLVIESGNDFRAALEKGVRLKAAGQPITAKLLEPVYAGEELAIPAGSTIKGHVSSITTAPMRKRVGRLLAGDFTPPKTACVTFDQLVLSDGTTAPIRSDSAVGLGRVANSRYLPKAQRPGIRQKLKGAMAPLREPNKMQRLGEAV
Ga0307471_1016055471	3300032180	Hardwood Forest Soil	MSMKNRNVSNLKHGLVWILLLHSVLGLTGIPVRAQDTRSEEKALVVVPGNDFRAALDKGVRLKTVGQPITAKLLEPVYAGEDLALPAGSTIKGHVSSITTDPMRKRTGRLLAGDFTPPKTAHVTFDQLVLSDGTTVPIHSDSTVGLGRVANSRYLSKAQRPGM

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F092501

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences