NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F092486

Metagenome Family F092486

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F092486
Family Type Metagenome
Number of Sequences 107
Average Sequence Length 123 residues
Representative Sequence MNLIQDSVEFLRARWWLMLAVSSAVGIAAVSLRLSESEAARQKRTQEAKKKELRAIANRISQYAKSVRERFPDGAVVVSEDDLAAQLRKRPDYIVSALNALLTEQKVERMPLTGYWRLNA
Number of Associated Samples 86
Number of Associated Scaffolds 107

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 32.71 %
% of genes near scaffold ends (potentially truncated) 37.38 %
% of genes from short scaffolds (< 2000 bps) 85.98 %
Associated GOLD sequencing projects 80
AlphaFold2 3D model prediction Yes
3D model pTM-score0.58

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (100.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(24.299 % of family members)
Environment Ontology (ENVO) Unclassified
(34.579 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(47.664 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.122.124.126.128.130.132.134.136.138.140.142.144.146.148.150.152.154.156.158.160.162.164.166.168.170.172.174.176.178.180.182.184.186.188.190.192.194.196.198.200.202.204.206.208
1soilH2_104347833
2Ga0062595_1004090631
3Ga0066672_102841032
4Ga0066677_100315814
5Ga0066683_103214863
6Ga0066673_100698744
7Ga0066678_109044431
8Ga0066676_108097701
9Ga0066675_101681482
10Ga0066388_1001992965
11Ga0066388_1021165043
12Ga0066388_1028218771
13Ga0066388_1081569182
14Ga0070709_103422472
15Ga0070711_1008440391
16Ga0070711_1012600681
17Ga0066681_101924253
18Ga0066687_102886813
19Ga0070706_1007734561
20Ga0070707_1003479804
21Ga0070698_1006403411
22Ga0066704_102305793
23Ga0066698_103092592
24Ga0066670_101200441
25Ga0066699_109584071
26Ga0066693_104946401
27Ga0066691_105175802
28Ga0066706_106573401
29Ga0070717_119433141
30Ga0066656_110498822
31Ga0070712_1005924203
32Ga0097621_1004427182
33Ga0066665_106212122
34Ga0066660_101787323
35Ga0066660_101974501
36Ga0075425_10000140613
37Ga0075434_1001913115
38Ga0066710_1006144281
39Ga0066710_1032480292
40Ga0066709_1005605202
41Ga0066709_1015583571
42Ga0126374_118059681
43Ga0126384_108611362
44Ga0126373_126064701
45Ga0134109_103057252
46Ga0134063_105254292
47Ga0134063_106837262
48Ga0126370_122710011
49Ga0126372_107201991
50Ga0126372_114118332
51Ga0126381_1001525112
52Ga0137364_104926532
53Ga0137364_105399201
54Ga0137383_100609181
55Ga0137382_109839421
56Ga0137365_105656392
57Ga0137362_103737663
58Ga0137381_104872842
59Ga0137378_101519884
60Ga0137378_102956471
61Ga0137370_102474541
62Ga0137370_102706071
63Ga0137387_107409952
64Ga0137372_100025267
65Ga0137372_104202581
66Ga0137372_105314481
67Ga0137372_111763661
68Ga0137367_111732011
69Ga0137366_100693313
70Ga0137366_101163913
71Ga0137366_102516122
72Ga0137371_104467062
73Ga0137384_114644361
74Ga0137360_103220762
75Ga0137361_113520181
76Ga0150984_1152825771
77Ga0137398_107186922
78Ga0164299_105505961
79Ga0164302_111980511
80Ga0157369_116389001
81Ga0157374_123761021
82Ga0157372_124622332
83Ga0134079_100458592
84Ga0137403_107082031
85Ga0132258_103977471
86Ga0132256_1002727601
87Ga0066655_104306241
88Ga0066655_110965741
89Ga0066667_102371011
90Ga0066669_110287541
91Ga0193749_10345283
92Ga0193721_10099412
93Ga0193721_10293432
94Ga0182009_101314882
95Ga0182009_102060831
96Ga0207699_101364962
97Ga0207663_102047422
98Ga0207646_104036183
99Ga0207665_102048044
100Ga0209686_11784982
101Ga0209056_101087113
102Ga0209805_13538771
103Ga0307280_101241251
104Ga0310813_100249963
105Ga0310812_104290992
106Ga0310810_101687572
107Ga0310810_106352004
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: Yes Secondary Structure distribution: α-helix: 60.14%    β-sheet: 7.43%    Coil/Unstructured: 32.43%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

102030405060708090100110120MNLIQDSVEFLRARWWLMLAVSSAVGIAAVSLRLSESEAARQKRTQEAKKKELRAIANRISQYAKSVRERFPDGAVVVSEDDLAAQLRKRPDYIVSALNALLTEQKVERMPLTGYWRLNAExtracel.Cytopl.Sequenceα-helicesβ-strandsCoilSS Conf. scoreSignal PeptideTM segmentsTopol. domains
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer

WebGL does not seem to be available.

This can be caused by an outdated browser, graphics card driver issue, or bad weather. Sometimes, just restarting the browser helps. Also, make sure hardware acceleration is enabled in your browser.

For a list of supported browsers, refer to http://caniuse.com/#feat=webgl.

Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.58
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
100.0%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Soil
Soil
Vadose Zone Soil
Tropical Forest Soil
Grasslands Soil
Soil
Sugarcane Root And Bulk Soil
Soil
Grasslands Soil
Soil
Tropical Forest Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Arabidopsis Rhizosphere
Miscanthus Rhizosphere
Populus Rhizosphere
Corn Rhizosphere
Miscanthus Rhizosphere
Arabidopsis Rhizosphere
Avena Fatua Rhizosphere
9.3%24.3%6.5%3.7%18.7%7.5%2.8%3.7%11.2%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
soilH2_1043478333300003324Sugarcane Root And Bulk SoilTVEFLRARWWIALAVSSVVGVAAVSLRLTESEAARKKRIEETKKKELRAVANRISHYAKSVRARYPDGVVVVSEEDLAAQLRKRPDYIVSALTALLNEQKAERTPAGYWRLNA*
Ga0062595_10040906313300004479SoilIFSFPRPVVILLIPEMNIIQDSVEFLRARWWLMLTMSSAVGIAAVSLRLSEPEAARQKRTQEAKKKELRAIANRISQYAKSVRERFPDGAVVVSEGDLAAQLRKRPDYVVSALNALLTEQKVARMPLAGYWRLNA*
Ga0066672_1028410323300005167SoilMNLIQDTVEFLRTRWWLAAAVSSAVAIAAVAVRLSESEAAREKRMREAKKKELRTLADRIANYAQTVRERFPDGAVVVSEEDLAAQLRKRPDYIATALNVLLKEEKVQRAPLVGYWKLNA
Ga0066677_1003158143300005171SoilSGHRESGQLALRNLLYSLLGGYSPNTNMNLAQDTVEFLRNRWWMVAIASSAVGVAAVSARLSESGAAREKRIEESRRKELRAIASRISHYAKSVRQRFPDGAVVVSEQDLAAQLRKRPDYILKALNALLNEQKVERMPLTGYWRLHS*
Ga0066683_1032148633300005172SoilMNLIQDTVEFLRTRWWLAAAVSSAVAIAAVAVRLSESEAAREKRMREAKKKELRTLADRIANYAQTVRERFPDGAVVVSEEDLAAQLRKRPDYIATALNVLLKEEKVQRAPLVGYWRLNA
Ga0066673_1006987443300005175SoilMRICNLQHQLERHFNRGASGHRESGQLALRNLLYSLLGGYSPNTNMNLAQDTVEFLRNRWWMVAIASSAVGIAAVSARLSESGAAREKRIEESRRKELRAIASRISHYAKSVRQRFPDGAVVVSEQDLAAQLRKRPDYILKALNALLNEQKVERMPLTGYWRLHS*
Ga0066678_1090444313300005181SoilMNLIQDTVEFLRTRWWLAAAVSSAVAIAAVAVRLSESEAAREKRMREAKKKELRTLADRIANYAQTVRERFPDGAVVVSEEDLAAQLRKRPDYIATALNVLLKEEKVQRAPLVGYW
Ga0066676_1080977013300005186SoilMNLIQDSVEFLRARWWLMLAVSSAVGIAAVSLRLSESEAARQKRTQEAQKKELRAIANRISQYAKSVRERFPDGAVVVSEDDLAAQLRKRPDCIVSALNALLTEQKVERMPLTGYWRLNA
Ga0066675_1016814823300005187SoilGPRILEMRIPARKVPMMNLTQDTVEFLRTRWWVVVTVSSAVGIAAVCVRLSESDAVRKKRLQEAEKKELRAIANRISQYAKSVRERFPDGAVVVSEEDLAAQLRKRPDYIVSALKALLNEQKVERAPLTGYWRLNA*
Ga0066388_10019929653300005332Tropical Forest SoilMNLIEDTVEFLRNRWWLVAVASSAVAIAAVSVRLCESEAAREKRIHEAKKKELRALADRISKYTKSLRDRFPDRAVVVSEEDLAAQLRKRPDYIATALNVLLREEKVQRMPLTGYWKLNA
Ga0066388_10211650433300005332Tropical Forest SoilMNLSEDTVEFFRNRWWLVAVASSAVGVAAVALRLSESEAAREKRIQETKKKELRAIANRISHYAKSVCARFPDGAVVVSEEDLAAQLRKRPDYIVSALNSLLKEQKVERTPLTGYWR
Ga0066388_10282187713300005332Tropical Forest SoilPQLCSAGILPIATMDPIQDSVDFLRARWWLVAIASSVVGIAAVSVRLSESEATRENRIQETRKKELRAIANRISHYAKSMRKQFPEGSVIVSEEDLAAQLRKRPDYIVSALNTLLNEQKVERTSLTGYWRLNA*
Ga0066388_10815691823300005332Tropical Forest SoilSPSTPMNLVQNTVEFLRNRWWLVAIASSAVGIAAVSLRLSESEAAREKRLHETKKKELQAIAHRISHYGKSVRERFPDGAVVVSEEDLAVRLRKRPDYVVSALNALLNEQKVERTPVNGYWRLNA*
Ga0070709_1034224723300005434Corn, Switchgrass And Miscanthus RhizosphereMMNFAQDTVEFLRTRWWVVVAVSSAVGIAAVSVRLSESETARKKRMQEAEKKELRAIANRISQYAKSVRERFPDGAVVVSEEDLAAQLRKRPDYIVSALKALLNEQKVERAPLTGYWRLNA*
Ga0070711_10084403913300005439Corn, Switchgrass And Miscanthus RhizosphereASTVAYSRNANTGGSAPTMNLAQDTVDFLRTRWWVVVAVSSAVGIAAVSLRLSESESTRKKRLQEAEKKELRAIANRISQYAKSVRERFPDGAIVVSEEDLAAQLRKRHDYIVSALKALLNEQKVERTPLTGYWRLNA*
Ga0070711_10126006813300005439Corn, Switchgrass And Miscanthus RhizosphereMNFAQDTVEFLRTRWWVVVAVSSAVGIAAVCVRASESDAVRKKRLQEAKKKELRAIANRISQYAKSVRERFPDGAVVVSEEDLAAQLRKRPDYIVSALKALLNEQKVERAPLTGYWRL
Ga0066681_1019242533300005451SoilFNRGASGHRESGQLALRNLLYSLLGGYSPNTNMNLAQDTVEFLRNRWWMVAIASSAVGIAAVSARLSESGAAREKRIEESRRKELRAIASRISHYAKSVRQRFPDGAVVVSEQDLAAQLRKRPDYILKALNALLNEQKVERMPLTGYWRLHS*
Ga0066687_1028868133300005454SoilALRGSRILEMRIPARKVPIMNLTQDTVEFLRTRWWVVVAVSSAVGIAAVCVRLSESDAVRKKRLQEAEKKELRAIANRISQYAKSVRERFPDGAVVVSEEDLAAQLRKRPDYIVSALKALLNEQKVERAPLTGYWRLNA*
Ga0070706_10077345613300005467Corn, Switchgrass And Miscanthus RhizosphereMNLIHDSVEFVRNRWWLVAIASSVVGIAALSLRLSESEAAREKRIEESKKKELRAIANRISQYAKSVRKQFPDGSVVISEEDLAAQLRKRPDYIISALNALLKDQKVERTPVTGYWRLN
Ga0070707_10034798043300005468Corn, Switchgrass And Miscanthus RhizosphereMNLIHDSVEFVRNRWWLVAIASSVVGIAALSLRLSESEAAREKRIEESKKKELRTIANRISQYAKSVRKQFPDGSVVISEEDLAAQLRKRPDYIISALNALLKDQKVERTPVTGYWRLNA
Ga0070698_10064034113300005471Corn, Switchgrass And Miscanthus RhizosphereMNLIHDSVEFVRNRWWLVAIASSVVGIAALSLRLSESEAAREKRIEESKKKELRAIANRISQYAKSVRKQFPDGSVVISEEDLAAQLRKRPDYIISALNALLKDQKVERTPVTGYWRLNA
Ga0066704_1023057933300005557SoilTVEFLRTRWWLAAAVSSAVAIAAVAVRLSESEAAREKRMREAKKKELRTLADRIANYAQTVRERFPDGAVGVSEEDLAAQLRKRPDYIATALNVLLKEEKVQRAPLVGYWKLNA*
Ga0066698_1030925923300005558SoilMNLIQDSVEFLRARWWLMLAVSSAVGIAAVSLRLSESEAARQKRTQEAKKKELRAIANRISEYAKSVRERFPDGAVVVSEDDLAAQLRKRPDCIVSALNALLTEQKVERMPLTGYWRLNA
Ga0066670_1012004413300005560SoilMRICNLQHQLERHFNRGASGHRESGQLALRNLLYSLLGGYSPNTNMNLAQDTVEFLRNRWWMVAIASSAVGVGAVSARLSESGAAREKRIEESRRKELRAIASRISHYAKSVRQRFPDGAVVVSEQDLAAQLRKRPDYILKALNALLNEQKVERMPLTGYWRLHS*
Ga0066699_1095840713300005561SoilSAVAIAAVAVRLSESEAAREKRMREAKKKELRTLADRIANYAQTVRERFPDGAVVVSEEDLAAQLRKRPDYIATALNVLLKEEKVQRAPLVGYWKLNA*
Ga0066693_1049464013300005566SoilVNLVNWPSVIFSTAVLGRYSPNTNMNLAQDTVEFLRNRWWMVAIASSAVGIAAVSARLSESGAAREKRIEESRRKELRAIASRISHYAKSVRQRFPDGAVVVSEQDLAAQLRKRPDYILKALNALLNEQKVERMPLTGYWRLHS*
Ga0066691_1051758023300005586SoilMNLVQDTVEFLRNRWWLVAVAPSAVGVAAVALRLSESEAAREKRIQQTKKKELRAIAKRISHYAKSVRARFPDGAVVVSEDDLAAQLRKRPDYIVSALNALLKEEKVER
Ga0066706_1065734013300005598SoilMNLIQDSVEFLRARWWLMLAVSSAVGIAAVSLRLSESEAARQKRTQEAKNKELRAIANRISQYAKSVRERFPDGAVVVSEDDLAAQLRKRPDYIVSALNALLTEQKVERMPLTGY
Ga0070717_1194331413300006028Corn, Switchgrass And Miscanthus RhizosphereMMNFAQDTVEFLRTRWWVVVAVSSAVGIAAVCVRASESDAVRKKRLQEAEKKELRAIANRISQYAKSVRERFPDGAVVVSEEDLAAQLRKRPDYIVSAL
Ga0066656_1104988223300006034SoilLLIAIPVSSVPTMNLIQDTVEFLRTRWWLAAAVSSAVAIAAVAVRLSESEAAREKRMREAKKKELRTLADRIANYAQTVRERFPDGAVVVSEEDLAAQLRKRPDYIATALNVLLKEEKVQRAPLVGYWRLNA*
Ga0070712_10059242033300006175Corn, Switchgrass And Miscanthus RhizosphereMNLAQDTVDFLRTRWWVVVAVSSAVGIAAVSLRLSESESTRKKRLQEAEKKELRAIANRISQYAKSVRERFPDGAIVVSEEDLAAQLRKRHDYIVSALKALLNEQKVERTPLTGYWRLNA
Ga0097621_10044271823300006237Miscanthus RhizosphereMEKYTSVRNLLVPSPGGYSPHNKMNLIQDSVEFLRARWWLMLAVSSAVGIAAVSLRLSESEATRQKRTQEAKKKELRAIADRISHYAISIRKRFPDGAVVVSEGDLAAQLRKRPDYVVSALNALLTEQKVARMPLAGYWRLNA*
Ga0066665_1062121223300006796SoilMNLIQDSVEFLRARWWLMLAVSSAVGIAAVSLRISESEAARQKRTQEAKKKELRAIANRISQYAKSVRGRFPDGAVVVSEDDLAAQLRKRPDYIVSALNALLTEQKVERMPLTGYWRLNA
Ga0066660_1017873233300006800SoilMMNLTQDTVEFLRTRWWVVVAVSSAVGIAAVCVRLSESDAVRKKRLQEAEKKELRAIANRISQYAKSVRERFPDGAVVVSEEDLAAQLRKRPDYIVSALKALLNEQKVERAPLTGYWRLNA*
Ga0066660_1019745013300006800SoilLTLCPLAILLIAIPVSSVPTMNLIQDTVEFLRTRWWLAAAVSSAVAIAAVAVRLSESEAAREKRMREAKKKELRTLADRIANYAQTVRERFPDGAVVVSEEDLAAQLRKRPDYIATALNVLLKEEKVQRAPLVGYWKLNA*
Ga0075425_100001406133300006854Populus RhizosphereMNLVQDTVDFLRTRWWLVAVASSAVAIAAVSIRLSESEAAREKRIHEAKKKELRALADRIAKYAKSLRDRFPDGAVVVSEEDLAAQLRKRPDYIATALNVLLKEEKVQRMPLTGYWKLKA
Ga0075434_10019131153300006871Populus RhizosphereDFLRTRWWLVAVASSAVAIAAVSIRLSESEAAREKRIHEAKKKELRALADRIAKYAKSLRDRFPDGAVVVSEEDLAAQLRKRPDYIATALNVLLKEEKVQRMPLTGYWKLKA*
Ga0066710_10061442813300009012Grasslands SoilMRTSLVLPRRKVHQPSVIFSSASPRGYSPNSNPSPSVPRMNLVQDSVEFLRARWWLAVAVSSVVGIVAVSLRLSESEASRAKRIQETKRKELRALTDRISKYAKSLRDRFPEGTVEVSEEDLAAQLRKRPDYIVSALNALLNEHKVE
Ga0066710_10324802923300009012Grasslands SoilSVFRTRTSLVPSPRKVHPPSVIFTMSTTPGILALNRMNLVENTVEFLRNRWWLVAVASSAVGAAAVALRLSESEVAREKRVQDAKKKELRTIANRISHYAKSVRARFPDGAVVVSEDDLAAQLRKRPDYIVSALNALLKEEKVERTPLTGYWRLNA
Ga0066709_10056052023300009137Grasslands SoilMNLAQDTVEFLRNRWWMVAIASSAVGIAAVSARLSESGAAREKRIEESRRKELRAIASRISHYAKSVRQRFPDGAVVVSEQDLAAQLRKRPDYILKALNALLNEQKVERMPLTGYWRLHS
Ga0066709_10155835713300009137Grasslands SoilMNLIQDSVEFLRARWWLMLAVSSAVGIAAVSLRLSESEAARQKRTQEAKNKELRAIANRISQYAKSVRERFPDGAVVVSEDDLAAQLRKRPDYIVSALNALLTEQKVERMPLTGYWRLNA
Ga0126374_1180596813300009792Tropical Forest SoilMNLIEDTVEFLRTRWWLVAVASSAVAIAAVSVRLSESEAAREKRIHEAKKRELRALADRISKYAKSLRDRFPDGAVVVSEDDLAAQLRKRPDYIATALNVLLKEEKVQRMPLTGYWKLNA
Ga0126384_1086113623300010046Tropical Forest SoilMNLVQDSVEFLRARWWVVLAVSSAVGIAAVSLRLSESEAARQKRMQEAKKKELRTIANRISQYARSVRKSFPDGTIVVSEDDLASQLRKHPDYIVSALNTLRNEQKVERMPLTGYWRLNA
Ga0126373_1260647013300010048Tropical Forest SoilSGRWVFSRYTMKLVQDSVEFIRNRWWIVAIASSAVGIAAVSLRLSESEAARKKRLEETKKKELRAIATKISHYGKSVRKRFPDGAVVVSEEDLAAQLRKRPEYIVSALQALLNEKKVERTPVTGYWRLNP*
Ga0134109_1030572523300010320Grasslands SoilMNLAQDTVEFLRTRWWVVVAASSAVGIAAVSVRLSESEAARKKRLQEAEKKELRAIANRISRYAKSVRERFPNGTVVVSEEDLAAQLGKRPDYIVSALKALLNEQKVERTPVTGYWRLNA
Ga0134063_1052542923300010335Grasslands SoilMSTTPGILALNRMNLVENTVEFLRNRWWLVAVASSAVGAAAVALRLSESEVAREKRVQDAKKKELRTIANRISHYAKSVRARFPDGAVVVSEDDLAAQLRKRPDYIVSALNALLKEEKVERTPLTGYWRLNA*
Ga0134063_1068372623300010335Grasslands SoilMNLIQDTVEFLRTRWWLAAAVSSAVAIAAVAVRLSESEAAREKRMREAKKKELRTLADRIANYAQTVRERFPDGAVVVSEEDLAAQLRKRPDYIATALNVLLKEEKVQRAPLV
Ga0126370_1227100113300010358Tropical Forest SoilMNLIEDTVEFLRNRWWLVAVASSAVAIAAVSVRLSESEAAREKRIHEAKKRELRALADRISKYAKSLRDRFPDRAVVVSEEDLAAQLRKRPDYIATALNVLLREEKVQRMPLTGYWKLNA
Ga0126372_1072019913300010360Tropical Forest SoilMNLVQDTVEFLRNRWWLVAVASSAVGVAAVALRLSESEAAREKRIQETKKKELRAIANRISHYAKSVCARFPDGAVVVSEEDLAAQLRKRPDYIVSALNSLLKEQKVERTPLTGYWRLNA
Ga0126372_1141183323300010360Tropical Forest SoilLILAVSSAVGIAAVSLRLSESEAARQKRRQEAKKKELRAIANRISQYAKSIRERFPDGAVVVSEDDLAAQLRKRPDYIVSALNALLNEQRVERMPLTGYWRLNA*
Ga0126381_10015251123300010376Tropical Forest SoilMKLIQDSVEFIRNRWWIVAIASSAVGIAAVSLRLSESEAARKKRIEETKKKELRAIATKISHYGKSVRQRFPDGAVVVSEEDLAAQLRKRPAYIVNALQALLNEKKVERTPVTGYWRLNP
Ga0137364_1049265323300012198Vadose Zone SoilMSLVQDTVEFLRARWWLALAVSSVVGIAAVSLRLSESEASRAKRIQETKRKKLRALADRISKYAKSLRDRFPDGAVVVSEEDLAAQLRKRADYIATALNVLLKEEKVQRTPLTGYWRLKT
Ga0137364_1053992013300012198Vadose Zone SoilNLQDTAEFLRNRWWMVAIVSSAVGIAAVSARLSESGAAREKRIEESRKKELRAIANRISHYAKSVRQRFPDGAVVVSEQDLAAQLRKRPDYILKALNALLNEQKVERMPLTGYWRLHS*
Ga0137383_1006091813300012199Vadose Zone SoilMNLVQDTVEFLRTRWWLAVAVSSAVAIAAVSLRLSESEAAREKRIREAKKKELRALADRIANYAQTVRKRFPDGDVVVSEEDLAAQLRKRPDYIATALNVLLEEEKVQRTPLTS
Ga0137382_1098394213300012200Vadose Zone SoilMMNLTQDTVEFLRTRWWVVVAASSAVGIAAGCVRLSESDAVRKKRLQEAEKKELRAIANRISQYAKSVRERFPDGAIVVSEEDLAAQLRKRPDYLVSALKALLNEQKVERAPLTGYWRLNA*
Ga0137365_1056563923300012201Vadose Zone SoilMNLAQDTVEFLRTRWWVVVAVSSAVGIAAVSVRLSESEAARKKRLQEAEKKELRAIANRISQYAKSVRERFPNGTVVVSEEDLAAQLRKRPDYIVSALKALLNEQKVERTPLTGYWRLNT
Ga0137362_1037376633300012205Vadose Zone SoilMNLIQDSVEFLRARWWLMLAVSSAVGIAAVSLRLSESEAARQKRTQEAKKKELRAIANRISEYAKSVRERFPDGAVVVSEDDLAAQLRKRPDYIVSALNALLTEQKVERMPLTGYWRLNA
Ga0137381_1048728423300012207Vadose Zone SoilMNLIQDSMEFLRARWWLMLAVSSAVGIAAVSLRLSESEAARQKRTQEAKKKELRAIANRISQYAKSVRERFPDGAVVVSEDDLAAQLRKRPDYIVSALNALLTEQKVERMPLTGYWRLNA
Ga0137378_1015198843300012210Vadose Zone SoilMNLVQDTVEFLRTRWWLAVAVSSAVAIAAVSLRLSESEAAREKRIREAKKKELRALADRIANYAQTVRERFPDGAVVVSEEDLAAQLRKRPDYIATALNVLLKEEKVQRTPLTGYWKLNA
Ga0137378_1029564713300012210Vadose Zone SoilMNLIQDSVEFLRARWWLMLAVSSAVGIAAVSLRLSESEAARQKRTQEAKKKELRAIANRISQYAKSVRERFPDGAVVVSEDDLAAQLRKRPDYIVSALNALLTEQKVEGMPLTGYWRLNA
Ga0137370_1024745413300012285Vadose Zone SoilMQIPARNVPTMNLAQDTVEFLRTRWWVVVAASSAVGIAAVCVRLSESEAARKKRLQEAEKKELRAIANRISRYAKSVRERFPNGTVVVSEEDLAAQLGKRPDYIVSALKALLNEQKVERTPVTGYWRLNA*
Ga0137370_1027060713300012285Vadose Zone SoilMNLIQDSVEFLRARWWLMLAVSSAVGIAAVSLRLSESEAARQKRTQEAKKKELRAIANRISHYAKSVRQRFPDGAVVVSEQDLAAQLRKRPDYILKALN
Ga0137387_1074099523300012349Vadose Zone SoilVEILRTRWWLAVAASSAVTIAAVALRLFESEAAREKRIREAKKKELRALADRIANYAQTVRKRFPDGAVVVSEEDLAAQLRKRPDYIATALNVLLEEEKVQRTPLTSYWKLNV*
Ga0137372_1000252673300012350Vadose Zone SoilMDLVQDTVDFLRTRWWLAVAVSSVVGIAAVSLRLSESEASRERRMQETKRKELRALANRISRYAKSVRERFPDGAVVVSEEDLAAQLRKRPDYIVSALNALLNEQKVERTSLTGYWRLNA
Ga0137372_1042025813300012350Vadose Zone SoilMNLAQDTVEFLRTRWWVVVAVSSAVGIAAVSVRLSESEAARKKRLQEAEKKELRAIANRISQYAKSVRERFPNGTVVVSEEDLAAQLRKRPDYIATALNVLLKEEKVQRTPLTGYWRLNT
Ga0137372_1053144813300012350Vadose Zone SoilMNLIQDSVEFLRARWWLMLAVSSAVGIAAVSLRLSESEAARQKRTQEAKKKELRAIANRISQYAKSVRERFPDGAVVVSEDDLAAQLRKRPDYIVSA
Ga0137372_1117636613300012350Vadose Zone SoilLSPSRLPPSASQQSPSRLSESEAAREKRIQDAKKKELRTIANRISHYAKSVRARFPDGAVVVSEDDLAAQLRKRPDYIVSALNALLKEEKVERTPLTGYWRLNA*
Ga0137367_1117320113300012353Vadose Zone SoilMNLVQDTVEFLRTRWWLAVAVSSVVGIAAVSLRLSESEASRERRMQETKRKELRALANRISRYAKSVRERFPDGAVVVSEEDLAAQLRKRPDYIVSALNALLNEQKVERTSLTGYWRLNA
Ga0137366_1006933133300012354Vadose Zone SoilMDLVQDTVDFLRTRWWLAVAVSSVVGIAAVSLRLSESEASRERRTQETKRKELRALANRISRYAKSVRERFPDGAVVVSEEDLAAQLRKRPDYIVSALNALLNEQKVERTSLTGYWRLNA
Ga0137366_1011639133300012354Vadose Zone SoilMNLAQDTVEFLRTRWWVVVAVSSAVGIAAVSVRLSESEAARKKRLQEAEKKELRAIANRISQYAKSVRERFPNGTVVVSEEDLAAQLRKRPDYIVSALKALLNEQKVERTPLTGYWRLNA
Ga0137366_1025161223300012354Vadose Zone SoilMNLVQDTVEFLRTRWWLALAVSSAVGIAAISIRLSESKATRAKRIQEAKKKELRAIATRISHYAKSVRKRFPDGAVVVSEEDLAAQLRKRPDYIATALNVLLKEEKVQRTPLTGYWRLNT
Ga0137371_1044670623300012356Vadose Zone SoilMNLIQDSVEFLRALWSHMLAVSSADGIAAVSLRLSESEAARQKRTQEAKKKELRAIANRISQYAKSVRERFPDGAVVVSEDDLAAQLRKRPDYIVSALNALLTEQKVERMPLTGYWRLNA
Ga0137384_1146443613300012357Vadose Zone SoilMNLAQDTVEFLRTRWWVVVAVSSAVGIAAVSVRLSESEAARKKRLQEAEKKELRAIANRISQYAKSVRERFPNGTVVVSEEDLAAQLRKRPDYIVSALKALLNEQKVE
Ga0137360_1032207623300012361Vadose Zone SoilAVSSAVGIAAVSLRLSESEAARQKRTQEAKKKELRAIANRISDYAKSVRERFPDGAVVVSEDDLAAQLRKRPDYIVSALHALLTEQKVERMPLTGYWRLNA*
Ga0137361_1135201813300012362Vadose Zone SoilMNLIQDSVEFLRARWWLMLAVSSAVGIAAVSLRLSESEAARQKRTQEAKKKELRAIANRISDYAKSVRERFPDGAVVVSEDDLAAQLRKRPDYIVSALNALLTEQKVERMPLTGYWRLNA
Ga0150984_11528257713300012469Avena Fatua RhizospherePMMNLTQDTVEFLRTRWWVVVAVSSAVGIAAVCVRLSESDAVRKKRLQEAEKKELRAIANRISQYAKSVRERFPDGAVVVSEEDLAAQLRKRPDYIVSALKALLNEQKVERAPLTGYWRLNA*
Ga0137398_1071869223300012683Vadose Zone SoilMNLIQDSGEFLRARWWLMLAVSSAVGIAAVSLRLSESEAARQKRTQEAKKKELRAIANRISQYAKSVRERFPDGAVVVSEDDLAAQLRKRPDYIVSALNALLTEQKVERMPLTGYWRLNA
Ga0164299_1055059613300012958SoilMEKYTSVRNLLVPSSGGYSPHNKMNLIQDSVEFLRARWWLMLAVSSAVGIAAVSLRLSESEATRQKRTQEAKKKELRAIADRISHYAISIRKRFPDGAVVVSEGDLAAQLRKRPDYVVSALNALLTEQKVARMPLAGYWRLNA*
Ga0164302_1119805113300012961SoilMNLVQDTVEFFRNRWWIVAIASSAVGVAAVSLRLSESEVARKKRLEEAKKKELRSIANRISLYAKSVRERFPDGAVVVSEEDLAAQLGKRPEYIVSALNALLHEKKVERTPVAGDWRLNA
Ga0157369_1163890013300013105Corn RhizosphereMMTVVQDGVEFLRTRWWLIAIASSAVGVTAVSLRLFESPTAREKRIQETKKKELRAIATRISHYAKSVRERFPNGAVVVSEEDLAAQLRKRPDYVASALNALLNERKVERTPLTGYWRLNA*
Ga0157374_1237610213300013296Miscanthus RhizosphereMEKYTSVRNLLVPSPGGYSPHNKMNLIQDSVEFLRARWWLMLAVSSAVGIAAVSLRLSESEATRQKRTQEAKKKELRAIADRISHYAISIRKRFPDGAVGVSEGDLAAQLRKRPDYVVSALNALLTEQKVARMPLAGYWRLNA*
Ga0157372_1246223323300013307Corn RhizosphereVIFYSAVLLEYSPNTVVQDGVEFLRTRWWLIAIASSAVGVTAVSLRLFESPTAREKRIQETKKKELRAIATRISHYAKSVRERFPNGAVVVSEEDLAAQLRKRPDYVASALNALLNERKVERTPLTGYWRLNA*
Ga0134079_1004585923300014166Grasslands SoilMNLAQDTVEFLRTRWWVVVAVSSAVGMAAVSLRLSESECARKRRLQEAEKKELRAIANRISQYAKSVRERFPDGAVVVSEEDLAAQLRKRPDYIVSALKALLSEQKVERAPLTGYWRLNA
Ga0137403_1070820313300015264Vadose Zone SoilMNLIQDSVEFLRARWWLMLAVSSAVGIAAVSLRLSESEAAQQKRTKEAKKKELRAIANRISQYAKSVRERFPDGAVVVSEDDLAAQLRKRPDYIVSALNALLTEQKVERMPLTGYWRLNA
Ga0132258_1039774713300015371Arabidopsis RhizosphereMNLVQDSVEFLRNRWWIVAIASSAVGIAAVSLRLSESEAARKKRIEETRKKDLRAIATRISHYGKSVRERFPDGAVVVSEADLAAQLRKRPEYIVSALNALLNEKKVERTPVAGYWRLNA
Ga0132256_10027276013300015372Arabidopsis RhizosphereMNLVQDSVEFLRNRWWIVAIASSAVGIAAVSLRLSESEAARKKRIEETRKKDLRAIATRISHYGKSVRERFPDGAVVVSEAYLAAQLRKRPEYIVSALNALLNEKKVERTPVAGYWRLNA
Ga0066655_1043062413300018431Grasslands SoilMNLIQDSVEFLRARWWLMLAVSSAVGIAAVSLRLSESEAARQKRTQEAQKKELRAIANRISQYAKSVRERFPDGAVVVSEDDLAAQLRKRPDYIVSALNALLTEQKVERMPLTGYWRLNA
Ga0066655_1109657413300018431Grasslands SoilRGSRILEMQIPARNVPTMNLAQDTVEFLRTRWWVVVAASSAVGIAAVSVRLSESEAARKKRLQGAEKKELRAIANRISQYAKSVRERFPDGAVVVSEEDLAAQLRKRPDYIVSALKALLSEQKVERAPLTGYWRLNA
Ga0066667_1023710113300018433Grasslands SoilMNLIQDTVEFLRTRWWLAAAVSSAVAIAAVAVRLSESEAAREKRMREAKKKELRTLADRIANYAQTVRERFPDGAVVVSEEDLAAQLRKRPDYIATALNVLLKEEKVQRAPLVGYWRLDA
Ga0066669_1102875413300018482Grasslands SoilMNLIQDSVEFLRARWWLMLAVSSAVGIAAVSLRLSESEAARQKRTQEAKKKELRAIANRISQYAKSVRERFPDGAVVVSEDDLAAQLRKRPDYIVSALNALLTEQKVERMPLTGYWRLNA
Ga0193749_103452833300020010SoilKVPMMNLTQDTVEFLRTRWWVVVTVSSAVGIAAVCVRLSESDAVRKKRQQEAEKKELRAIANRISQYAKSVRERFPDGAVVVSEEDLAAQLRKRPDYIVSALKALLNEQKVERAPLTGYWRLNA
Ga0193721_100994123300020018SoilMNLVQDSVEFLRTRWWLVAGVSSAVSIAAVSLRLSESTAAREKRIQETKKKELRAIANRISHYAKSVRKRFPDGAVVVSEQDLAAQLRKRPDYIVSALNALLKDQKVERAPLTGYWRLNA
Ga0193721_102934323300020018SoilMNLAQDTVEFLRTRWWVVVAVSSAVGMAAVSLRLSESESARKRRLQEAEKKELRAIANRISQYAKSVRERFPDGAVVVSEEDLAAQLRKRPDYIVSALKALLSEQKVERAPLTGYWRLNA
Ga0182009_1013148823300021445SoilMDLIHDSVDFLRARWWLVAIASSVVGIAAVSVRLSESQAAREKRIQETRKKELRAIANRISDYAKSIRKRFPDGAVVVSEEDLAAQLRKRPDYIVSALNALLNEQKVERMPLTGYWRLNA
Ga0182009_1020608313300021445SoilMDLIQDSVDFLRARWWLVAIASSAVGIAAVSIRLSESETARLKRMQEIKRKELRALADRISKYARSLRDRFPDGTVVVSEADLAAQLRKRPDYIVSALNSLLKEQKVERTPLAGYWRLNA
Ga0207699_1013649623300025906Corn, Switchgrass And Miscanthus RhizosphereMMNFAQDTVEFLRTRWWVVVAVSSAVGIAAVCVRASESDAVRKKRLQEAEKKELRAIANRISQYAKSVRERFPDGAVVVSEEDLAAQLRKRPDYIVSALKALLNEQKVERAPLTGYWRLN
Ga0207663_1020474223300025916Corn, Switchgrass And Miscanthus RhizosphereMMNFAQDTVEFLRTRWWVVVAVSSAVGIAAVCVRASESDAVRKKRLQEAKKKELRAIANRISQYAKSVRERFPDGAVVVSEEDLAAQLRKRPDYIVSALKALLNEQKVERAPLTGYWRLN
Ga0207646_1040361833300025922Corn, Switchgrass And Miscanthus RhizosphereMNLIHDSVEFVRNRWWLVAIASSVVGIAALSLRLSESEAAREKRIEESKKKELRAIANRISQYAKSVRKQFPDGSVVISQEDLAVQLRKRPDYIISALNALLKDQKVERTPVTGYWRLNA
Ga0207665_1020480443300025939Corn, Switchgrass And Miscanthus RhizosphereMDLVQDTVDFLRTRWWVVVAVSSAVGIAAVSLRLSESESARKKRLQEAEKKELRAIANRISQYAKSVRERFPDGAIVVSEEDLAAQLRKRRDYIVSALKALLNEQKVERTPLTGYWRLNA
Ga0209686_117849823300026315SoilSGHRESGQLALRNLLYSLLGGYSPNTNMNLAQDTVEFLRNRWWMVAIASSAVGVAAVSARLSESGAAREKRIEESRRKELRAIASRISHYAKSVRQRFPDGAVVVSEQDLAAQLRKRPDYILKALNALLNEQKVERMPLTGYWRLHS
Ga0209056_1010871133300026538SoilMNLIQDSVEFLRARWWLMLAVSSAVGIAAVSLRISESEAARQKRTQEAKKKELRAIANRISQYAKSVRERFPDGAVVVSEDDLAAQLRKRPDYIVSALNALLTEQKVERMPLTGYWRLNA
Ga0209805_135387713300026542SoilSAVAIAAVAVRLSESEAAREKRMREAKKKELRTLADRIANYAQTVRERFPDGAVVVSEEDLAAQLRKRPDYIATALNVLLKEEKVQRAPLVGYWKLNA
Ga0307280_1012412513300028768SoilMNLTQDTVEFLRSRWWVVVAVSSAVGIAAVFVRLSESDAVRKKRLQEAEKKELRAIANRISQYAKSVRERFPDGAVVVSEEDLAAQLRKRPDYIVSALKALLNEQKVERAPLTGYWRLNA
Ga0310813_1002499633300031716SoilMEKYTSVRNLLVPSSGGYSPHNKMNLIQDSVEFLRARWWLMLAVSSAVGIAALSLRLSESEATRQKRTQEAKKKELRAIADRISHYAISIRKRFPDGAVVVSEGDLAAQLRKRPDYVVSALNALLTEQKVARMPLAGYWRLNA
Ga0310812_1042909923300032421SoilMNLIQDSVEFLRARWWLTLAVASAVGIAAVSLRLSETEASRQKRTQQAKNKELLAIANRISQYAKSVRERFPNGAVVVSEEDLAAQLRKRPDYIVSALNALLNEHKVERMPLAGYWRLNA
Ga0310810_1016875723300033412SoilMNLIQDSVEFLRARWWLTLAVASAVGIAAVSLRLSETEASRQKRTQQAKNKELRAIANRISQYAKSVRERFPDGAVVVSEEDLAAQLRKRPDYIVSALNALLNEHKVERMPLAGYWRLNA
Ga0310810_1063520043300033412SoilTNMNFVQDTVEFLRNRWWMVALASSAVGIVAISLRLSESAAAREKRIQEANKKELRAIANRISHYAKSVRERFPNGAVVVSEEDLAAQLRKRPDYVASALNALLNERKVERTPLTGYWRLNARRGALAQVQEFSARA


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.