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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |
| Basic Information | |
|---|---|
| Family ID | F092483 |
| Family Type | Metagenome / Metatranscriptome |
| Number of Sequences | 107 |
| Average Sequence Length | 65 residues |
| Representative Sequence | MTGSSLQDRVRALCFQVTAAKTDAEIRALLPQLQAAIHDHIDYLRAVAIEVIPEAFGRPHDTQN |
| Number of Associated Samples | 85 |
| Number of Associated Scaffolds | 107 |
| Quality Assessment | |
|---|---|
| Transcriptomic Evidence | Yes |
| Most common taxonomic group | Unclassified |
| % of genes with valid RBS motifs | 11.32 % |
| % of genes near scaffold ends (potentially truncated) | 34.58 % |
| % of genes from short scaffolds (< 2000 bps) | 84.11 % |
| Associated GOLD sequencing projects | 76 |
| AlphaFold2 3D model prediction | Yes |
| 3D model pTM-score | 0.66 |
| Hidden Markov Model |
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| Powered by Skylign |
| Most Common Taxonomy | |
|---|---|
| Group | Unclassified (66.355 % of family members) |
| NCBI Taxonomy ID | N/A |
| Taxonomy | N/A |
| Most Common Ecosystem | |
|---|---|
| GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (30.841 % of family members) |
| Environment Ontology (ENVO) | Unclassified (66.355 % of family members) |
| Earth Microbiome Project Ontology (EMPO) | Host-associated → Plant → Plant rhizosphere (78.505 % of family members) |
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| Predicted Topology & Secondary Structure | |||||
|---|---|---|---|---|---|
| Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 54.35% β-sheet: 0.00% Coil/Unstructured: 45.65% | Feature Viewer |
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| Powered by Feature Viewer | |||||
| Structure Viewer | |
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| Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.66 |
| Powered by PDBe Molstar | |
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| Pfam ID | Name | % Frequency in 107 Family Scaffolds |
|---|---|---|
| PF08241 | Methyltransf_11 | 3.74 |
| PF01384 | PHO4 | 2.80 |
| PF13649 | Methyltransf_25 | 2.80 |
| PF00072 | Response_reg | 1.87 |
| PF13668 | Ferritin_2 | 1.87 |
| PF03625 | DUF302 | 1.87 |
| PF13683 | rve_3 | 1.87 |
| PF13361 | UvrD_C | 1.87 |
| PF07992 | Pyr_redox_2 | 0.93 |
| PF01695 | IstB_IS21 | 0.93 |
| PF00041 | fn3 | 0.93 |
| PF00034 | Cytochrom_C | 0.93 |
| PF00488 | MutS_V | 0.93 |
| PF07676 | PD40 | 0.93 |
| COG ID | Name | Functional Category | % Frequency in 107 Family Scaffolds |
|---|---|---|---|
| COG0306 | Phosphate/sulfate permease | Inorganic ion transport and metabolism [P] | 2.80 |
| COG3439 | Uncharacterized conserved protein, DUF302 family | Function unknown [S] | 1.87 |
| COG0249 | DNA mismatch repair ATPase MutS | Replication, recombination and repair [L] | 0.93 |
| COG1193 | dsDNA-specific endonuclease/ATPase MutS2 | Replication, recombination and repair [L] | 0.93 |
| COG1484 | DNA replication protein DnaC | Replication, recombination and repair [L] | 0.93 |
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| Name | Rank | Taxonomy | Distribution |
| Unclassified | root | N/A | 66.36 % |
| All Organisms | root | All Organisms | 33.64 % |
| Visualization |
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| Powered by ApexCharts |
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| Habitat | Taxonomy | Distribution |
| Vadose Zone Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil | 30.84% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 7.48% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere | 6.54% |
| Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 5.61% |
| Terrestrial Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil | 4.67% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 4.67% |
| Hardwood Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil | 3.74% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere | 3.74% |
| Corn Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere | 2.80% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere | 2.80% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere | 2.80% |
| Switchgrass Rhizosphere | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere | 1.87% |
| Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil | 1.87% |
| Switchgrass Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere | 1.87% |
| Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere | 1.87% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 1.87% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere | 1.87% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 1.87% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 1.87% |
| Grass Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil | 0.93% |
| Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere | 0.93% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 0.93% |
| Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil | 0.93% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 0.93% |
| Agricultural Soil | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil | 0.93% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere | 0.93% |
| Populus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere | 0.93% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere | 0.93% |
| Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere | 0.93% |
| Visualization |
|---|
| Powered by ApexCharts |
| Taxon OID | Sample Name | Habitat Type | IMG/M Link |
|---|---|---|---|
| 2189573001 | Grass soil microbial communities from Rothamsted Park, UK - FD2 (NaCl 300g/L 5ml) | Environmental | Open in IMG/M |
| 3300002917 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm | Environmental | Open in IMG/M |
| 3300004480 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4 | Environmental | Open in IMG/M |
| 3300005295 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 | Environmental | Open in IMG/M |
| 3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Environmental | Open in IMG/M |
| 3300005330 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG | Environmental | Open in IMG/M |
| 3300005335 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG | Host-Associated | Open in IMG/M |
| 3300005339 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG | Host-Associated | Open in IMG/M |
| 3300005341 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG | Environmental | Open in IMG/M |
| 3300005345 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG | Environmental | Open in IMG/M |
| 3300005365 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG | Environmental | Open in IMG/M |
| 3300005435 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG | Environmental | Open in IMG/M |
| 3300005439 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG | Environmental | Open in IMG/M |
| 3300005456 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG | Host-Associated | Open in IMG/M |
| 3300005467 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG | Environmental | Open in IMG/M |
| 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Environmental | Open in IMG/M |
| 3300005547 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG | Environmental | Open in IMG/M |
| 3300005564 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG | Host-Associated | Open in IMG/M |
| 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Host-Associated | Open in IMG/M |
| 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Host-Associated | Open in IMG/M |
| 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Host-Associated | Open in IMG/M |
| 3300006175 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG | Environmental | Open in IMG/M |
| 3300006904 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3 | Host-Associated | Open in IMG/M |
| 3300009038 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG | Environmental | Open in IMG/M |
| 3300009089 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG | Environmental | Open in IMG/M |
| 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Host-Associated | Open in IMG/M |
| 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Host-Associated | Open in IMG/M |
| 3300009101 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG | Host-Associated | Open in IMG/M |
| 3300009143 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 | Environmental | Open in IMG/M |
| 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Host-Associated | Open in IMG/M |
| 3300009174 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG | Host-Associated | Open in IMG/M |
| 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Host-Associated | Open in IMG/M |
| 3300010371 | Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1 | Environmental | Open in IMG/M |
| 3300010373 | Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4 | Environmental | Open in IMG/M |
| 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Host-Associated | Open in IMG/M |
| 3300010399 | Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3 | Environmental | Open in IMG/M |
| 3300010400 | Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2 | Environmental | Open in IMG/M |
| 3300011269 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG | Environmental | Open in IMG/M |
| 3300012096 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG | Environmental | Open in IMG/M |
| 3300012189 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG | Environmental | Open in IMG/M |
| 3300012200 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG | Environmental | Open in IMG/M |
| 3300012205 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG | Environmental | Open in IMG/M |
| 3300012208 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG | Environmental | Open in IMG/M |
| 3300012361 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG | Environmental | Open in IMG/M |
| 3300012362 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG | Environmental | Open in IMG/M |
| 3300012582 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG | Environmental | Open in IMG/M |
| 3300012923 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG | Environmental | Open in IMG/M |
| 3300012929 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
| 3300012930 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
| 3300012957 | Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG | Environmental | Open in IMG/M |
| 3300012960 | Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG | Environmental | Open in IMG/M |
| 3300012986 | Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG | Environmental | Open in IMG/M |
| 3300013100 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG | Host-Associated | Open in IMG/M |
| 3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Host-Associated | Open in IMG/M |
| 3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Host-Associated | Open in IMG/M |
| 3300015242 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly) | Environmental | Open in IMG/M |
| 3300015264 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly) | Environmental | Open in IMG/M |
| 3300015371 | Combined assembly of cpr5 and col0 rhizosphere and soil | Host-Associated | Open in IMG/M |
| 3300015372 | Soil combined assembly | Host-Associated | Open in IMG/M |
| 3300015373 | Combined assembly of cpr5 rhizosphere | Host-Associated | Open in IMG/M |
| 3300019881 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c2 | Environmental | Open in IMG/M |
| 3300020018 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s2 | Environmental | Open in IMG/M |
| 3300020170 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
| 3300020583 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M | Environmental | Open in IMG/M |
| 3300022467 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
| 3300025903 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025911 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025912 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025914 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025941 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025945 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025961 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025981 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026023 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300027846 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300028536 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly) | Environmental | Open in IMG/M |
| 3300028884 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195 | Environmental | Open in IMG/M |
| 3300031231 | Coassembly Site 11 (all samples) - Champenoux / Amance forest | Environmental | Open in IMG/M |
| 3300031446 | Fir Summer Coassembly Site 11 - Champenoux / Amance forest | Environmental | Open in IMG/M |
| 3300031716 | Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3 | Environmental | Open in IMG/M |
| 3300031720 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515 | Environmental | Open in IMG/M |
| 3300031740 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05 | Environmental | Open in IMG/M |
| Geographical Distribution | |
|---|---|
| Zoom: | Powered by OpenStreetMap |
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| Protein ID | Sample Taxon ID | Habitat | Sequence |
| FD2_06205010 | 2189573001 | Grass Soil | MPSGLEDRIHQLCAQAVAAKSEAELQFILPQLQKAIRDHIRYCRALAVEVIPEAFG |
| JGI25616J43925_101611141 | 3300002917 | Grasslands Soil | MSRPVAVPTSSLESRVRILCAQAVAAKSEAEFRIVLPQLQAAIRDHISYLRAIAVDAIPEAFRNDANSAD* |
| Ga0062592_1000144341 | 3300004480 | Soil | MTGSSLQDRVQALCFQVTAAKTDAEIRALLPQLQAAIHDHVDYLRAVATEVIPEAFGRPHDIQS* |
| Ga0065707_102642242 | 3300005295 | Switchgrass Rhizosphere | MATSSLEERVRGLCAQAIAAKSEAELEFILPQLRQAIQDHIRHCRAVALEVIPRVFGSTNAAD* |
| Ga0065707_109605752 | 3300005295 | Switchgrass Rhizosphere | MIGSSLQDRVRELCFQVTAAKTEAEIGALLPQLQAAIHDHINYLRAVAIEVIPEAFRPVDDTRN* |
| Ga0070683_1015847771 | 3300005329 | Corn Rhizosphere | MTGSSLQDRVQALCFQVTAAKTDAEIRALLPQLQAAIHDHVDYLRAVATEVIPEAFGRPH |
| Ga0070690_1012762231 | 3300005330 | Switchgrass Rhizosphere | MTGSSLQDRVQALCFQVTAAKTDAEIRALLPQLQAAIHDHIDYLRAVAMEVIPEAFGRPHDTQN* |
| Ga0070666_107233012 | 3300005335 | Switchgrass Rhizosphere | MTGSSLQDRVRALCFQVTAAKTDAEIRALLPQLQAAIHDHIDYLRAVAMEVIPEAFGRPHDTQN* |
| Ga0070666_113783052 | 3300005335 | Switchgrass Rhizosphere | MTGSSLQDRVRALCFQVTAAQTDAELRALLPQLQSAIHDHIDYLRAVAIEVIPEAFGRPHDTQN* |
| Ga0070660_1004201401 | 3300005339 | Corn Rhizosphere | MTGSSLQDRVRALCFQVTAAKTDAEIRALLPQLQAAIHDHIEYLRAVAMEVIPEAFGRPHDTQN* |
| Ga0070691_109536101 | 3300005341 | Corn, Switchgrass And Miscanthus Rhizosphere | MTGSSLQDRVRALCFQVTAAKTDAEIRALLPQLQAAIHDHIDYLRAVAIEVIPEAFGRPHDTQN* |
| Ga0070692_102002112 | 3300005345 | Corn, Switchgrass And Miscanthus Rhizosphere | MTGSSLQDRVQALCFQVTAAKTDAEIRALLPQLQAAVHDHIDYLRAVATEVIPEAFGRPHDIQS* |
| Ga0070688_1005737791 | 3300005365 | Switchgrass Rhizosphere | MTGYSLQDRVQALCFQVTAAKTDAEIRALLPQLQAAIHDHVDYLRAVATEVIPEAFGRPHDTQN*ISAYAKNLIHLVP* |
| Ga0070714_1017545782 | 3300005435 | Agricultural Soil | MPSGLEDRIRQLCAQAIAAKSEAELQFISPQLRKAIRDHIRYCRALAVEVIPEAFGGDSNAAD* |
| Ga0070711_10000297512 | 3300005439 | Corn, Switchgrass And Miscanthus Rhizosphere | MPSGLEDRIRQLCAQAIAAKSEAELQFISPQLREAIRDHIRYCRALAVEVIPEAFGGDSNAAD* |
| Ga0070678_1015967611 | 3300005456 | Miscanthus Rhizosphere | MTGSSLQDRVQALCFQVTAAKTDAEIRALVPQLQAAIHDHIDYLRAVATEVIPEAFGRPHDIQS* |
| Ga0070706_1020818741 | 3300005467 | Corn, Switchgrass And Miscanthus Rhizosphere | MPPSSLEDRVRLLCAQAVAAKTDAEINAVLPQLRAAIRDHVRYLRAIAVEVIPEAFGDAIAKPQIS* |
| Ga0070679_1004161283 | 3300005530 | Corn Rhizosphere | MTGSSLQDRVRALCFQVTAAKTDAEIRALLPQLQAAIHDHIDYLRAVAIEVIPEAFGRPH |
| Ga0070693_1006119992 | 3300005547 | Corn, Switchgrass And Miscanthus Rhizosphere | MTGSSLQDRVQALCFQVTAAKTDAEIRALLPQLQAAIHDHVDYLRAVATEVIP*GFRTP |
| Ga0070664_1019343562 | 3300005564 | Corn Rhizosphere | PMTGSSLQDRVRALCFQVTAAKTDAEIRALLPQLQAAIHDHIEYLRAVAIEAIPEAFGRPHDTQN* |
| Ga0068857_1007549771 | 3300005577 | Corn Rhizosphere | MTGSSLQDRVRALCFQVTAAKTAAEIRALLPQLQAAIHDHIEYLRAVAIEAIPEAFGRPHDTQN* |
| Ga0068856_1001143491 | 3300005614 | Corn Rhizosphere | MTGSSLQDRVQALCFQVTAAKTDAEIRALLPQLQAAIHDHVDYLRAVATEVIPEAFGRPHDI |
| Ga0068858_1000590937 | 3300005842 | Switchgrass Rhizosphere | MTGSSLQDRVQALCFQVTAAKTDAEIRALLPQLQAAIHEHIDYLRAVATEVIPEAFGRPH |
| Ga0070712_1006472812 | 3300006175 | Corn, Switchgrass And Miscanthus Rhizosphere | MRHGIVSRVLPVAVPPSSLEDRDRVLCAQGIVAAKTEAELHVVLPQLQTAIQEHVRYLRAIAVEAIPEAFSRDSNAAD* |
| Ga0075424_1005523002 | 3300006904 | Populus Rhizosphere | MPSGLEDRIHQLCAQATATKSEAELEFILPQLRKAIQDHIRYCRALAVEVIPEAFGSDSNAAD* |
| Ga0099829_105036822 | 3300009038 | Vadose Zone Soil | MPPSSLEDRVRESCAQAVAAENEAELRIVLPRLQAAIPDRIRYLRAIAVEAIPEAFGRDSNATD* |
| Ga0099829_105392131 | 3300009038 | Vadose Zone Soil | MPPSSLEDRVRELCAQAVAAKTETELRVVLPQLRAAIHDHIRYLRALAVEVIPEAFGRDSNAAD* |
| Ga0099829_114969452 | 3300009038 | Vadose Zone Soil | PVAVPTSSLEDRVRILCAQAVAAESEAEFRTVLPQLRIAIRDHISYLRAIAVDAIPEAFRNDANSAD* |
| Ga0099828_101716861 | 3300009089 | Vadose Zone Soil | PSSLEDRVRELCAQAVAAKTETELRVVLPQLRAAIHDHIRYLRALAVEVIPEAFGRDSNAAD* |
| Ga0105240_102872401 | 3300009093 | Corn Rhizosphere | MTGSSLQDRVQALCFQVTAAKTDAEIRALLPQLQAAIHDHVDYLRAVATE |
| Ga0105245_100630606 | 3300009098 | Miscanthus Rhizosphere | VTGSSLQDRVQALCFQVTAAKTDAEIRALLPQLQAAIHDHVDYLRAVATEVIPEAFGRPHDIQS* |
| Ga0105247_101245732 | 3300009101 | Switchgrass Rhizosphere | MTGSSLQDRVRALCFQVTAAQTDAELRALLPQLQSAIHDHIDYLRAVAIEVIPEAFGRPHDIQS* |
| Ga0099792_110085912 | 3300009143 | Vadose Zone Soil | HSPVAMPPSSLEDRVRDLCAQAIAAKSQAELDLILPKLRAAIQDHIRYLRAIAVEAIPEAFGRDSNTAS* |
| Ga0105243_111117442 | 3300009148 | Miscanthus Rhizosphere | MTGSSLQDRVQALCFQVTAAKTDAEIRALLPQLQAAIHEHIDYLRAVATEVIPEAFGRPHDIQS* |
| Ga0105241_100160255 | 3300009174 | Corn Rhizosphere | MTGSSLQDRVQALRFQVTAAKTDAEIRALLPQLQAAIHDHVDYLRAVATEVIPEAFGRPHDIQS* |
| Ga0105249_105638431 | 3300009553 | Switchgrass Rhizosphere | MTGSSLQDRVRALCFQVTAAKTDAEIRALLPQLQAAIHDHIDYLRAVATEVIPEAFGRPHDIQS* |
| Ga0105249_124854392 | 3300009553 | Switchgrass Rhizosphere | MATSSLEERVRGLCAQVIAAKSEAELEFILPQLRQAIQDHIRHCRAVALEVIPRVFGSTNAAD* |
| Ga0134125_104471801 | 3300010371 | Terrestrial Soil | MTGSSLQDRLRALCFQVTAAQTDAELRALLPQLQSAIHDHIDYLRAVAIEVIPEAFGRPHDTQN* |
| Ga0134128_103830181 | 3300010373 | Terrestrial Soil | RALCFQVTAAKKDAEIRVLLPQLQAAIHDHIDYLRAVAIEVIPEAFGRPHDTQN* |
| Ga0105239_104692201 | 3300010375 | Corn Rhizosphere | LCAQVIAAKSEAELEFILPQLRQAIQDHIRHCRAVALEVIPRVFGSTNAAD* |
| Ga0105239_126025991 | 3300010375 | Corn Rhizosphere | MIGSSLQDRVRELCFQVTAAKTEAEIGALLPQLQAAIHDHINYLRAVAIEVIPEAFRPVDDTR |
| Ga0134127_116403732 | 3300010399 | Terrestrial Soil | MTGSSLQDRVRALCFQVTAAKTAAEIRALLPQLQAAIHDHIDYLRAVAMEVIPEAFGRPHDTQN* |
| Ga0134127_135689441 | 3300010399 | Terrestrial Soil | MTGSSLQDRVQALCFQVTAAQTDAELRALLPQLQSAIHDHIDYLRAVAIEVIPEAFGRPHDTQN* |
| Ga0134122_113365941 | 3300010400 | Terrestrial Soil | VTGSSLQDRVQALCFQVTAAKTDAEIRALLPQLQAAIHDHVDYLRAVATEVIPEAFGRPHDTQN* |
| Ga0137392_101394032 | 3300011269 | Vadose Zone Soil | MSPSSLEDRVRELCAQAVAAKTEAELRVVLPQLQAAIRDHIRYLRAIAVEVIPEAFGRDSNAAD* |
| Ga0137392_106878922 | 3300011269 | Vadose Zone Soil | MSRPVAVPTSSLEDRVRILAQAVAAESEAEFRTVLPQLRIAIRDHISYLRAIAVDAIPEAFRNDANSAD* |
| Ga0137389_101715004 | 3300012096 | Vadose Zone Soil | VAMPPSSLEDRVRELCAQAVAAKTETELRVVLPQLRAAIHDHIRYLRALAVEVIPEAFGRDSNAAD* |
| Ga0137389_106914393 | 3300012096 | Vadose Zone Soil | RSILKGSRSFSPVAMPPSSLEDRVRELCAQAVAAENEAELRIVLPRLQAAIPDRIRYLRAIAVEAIPEAFGRDSNATD* |
| Ga0137389_116057812 | 3300012096 | Vadose Zone Soil | MALFAVVMSPSSLEDRVRELCEQAVAAKTEAELNVILPQLQNAIRDHISYLRAIAAEAIPEAFGSDSKAAD* |
| Ga0137388_108132172 | 3300012189 | Vadose Zone Soil | IAMPPSSLEDRVRLLCAQAVAAKTDAEINAVLPQLQAAIRDHIRYLRAIAVEVIPEAFGRDSNAAD* |
| Ga0137388_115764311 | 3300012189 | Vadose Zone Soil | GTRPVAMSPSSLEDRVRELCAQAVAAKTEAELRVVLPQLQAAIRDHIRYLRAIAVEVIPEAFGRDSNAAD* |
| Ga0137382_105147191 | 3300012200 | Vadose Zone Soil | MAPSSLQDRVHKLCAQAIAAKSDAELEIILPQLRAAIRDHIRYLRAIALEVVPEAFGSDGNAAD* |
| Ga0137382_105246601 | 3300012200 | Vadose Zone Soil | MSLSRFDPFAMPPSSLEDRTRELCGQAVAAKTEAELNAILLQLQAAIHDHIRYLRAIAVEAIPEVFGRDSNAAS* |
| Ga0137362_101458495 | 3300012205 | Vadose Zone Soil | FVIAMPPSSLEDRVRLLCAQAVAAKTDAEINAVLPQLQAAIRDHIRYLRAIAVEVIPEAFGRDSNAAD* |
| Ga0137362_107801761 | 3300012205 | Vadose Zone Soil | MPPSSLEDRVRELCAQAVAAENEAELRIVLPRLQAAIPDRIRYLRAIAVEAIPEAFGKQSNAA* |
| Ga0137362_116622581 | 3300012205 | Vadose Zone Soil | DLCAQAIAAKSQAELDLILPKLRAAIQDHIRYLRAIAVEAIPVAFGRDSNAAD* |
| Ga0137376_107251191 | 3300012208 | Vadose Zone Soil | QDRVHKLCAQAIAAKSDAELEIILPQLRAAIRDHIRYLRAIALEVVPEAFGSDSNAAD* |
| Ga0137360_107347721 | 3300012361 | Vadose Zone Soil | MPPSSLEDRVRELCAQVAAAKTDAEVNVILPQLQAAIRDHIRYLRAIAVEVIPEAFGRDSNAAD |
| Ga0137360_115071071 | 3300012361 | Vadose Zone Soil | LFLIAMPPSSLEDRVRLLCAQAVAAKTDAEINAVLPQLQAAIRDHIRYLRAIAVEVIPEAFGRDSNAAD* |
| Ga0137361_114457671 | 3300012362 | Vadose Zone Soil | ALFVIAMPPSSLEDRVRLLCAQAVAAKADAEINAVLPQLQAAIRDHIRYLRAIAVEVIPEAFGRDSNAAD* |
| Ga0137358_109282641 | 3300012582 | Vadose Zone Soil | VAFLFVPFIPPVAMPPSSLEERVQDLCAQAIAAKSQAELDLILPKLQAAIRDHIRYLRAIAAEAIPEAFGRDSNAAD* |
| Ga0137359_108536571 | 3300012923 | Vadose Zone Soil | MPPSSLEDRVRELCAQAVAAKTEAELRVVLPQLQAAIRDHIRYLRAIAVEVIPEAFGRDSNAAD* |
| Ga0137404_100223723 | 3300012929 | Vadose Zone Soil | MPPSSLEERVQDLCAQAIAAESQAELDLILPQLQAAIRDHIRYLRAVAVEAIPEAFGRDSNAADLMSR* |
| Ga0137404_104880231 | 3300012929 | Vadose Zone Soil | LLYRLPNFGVALFAIAMPPSSLEDRVRLLCAQAVAAKTDAEINAVLPQLQAAIRDHIRYLRAIAVEVIPEAFGRDSNAAD* |
| Ga0137407_103612763 | 3300012930 | Vadose Zone Soil | MPPSSLEERVQDLCAQAIAAKSQAELDLILPQLQAAIRDHIRYLRAVAVEAIPEAFGRDSNAADLMSR* |
| Ga0137407_110098971 | 3300012930 | Vadose Zone Soil | AMPPSSLEDRVRELCAQAVAAKTEAELRVVLPQLQAAIRDHIRYLRAIAVEVIPEAFGRDSNAAD* |
| Ga0137407_116868521 | 3300012930 | Vadose Zone Soil | MPPSSLEDRVRDLCAQAVTAKTDAELRVVLPQLQAAIRDHIRYLRAVAVEAIPEAF |
| Ga0164303_100693822 | 3300012957 | Soil | MPSGLEDRIHQLCAQAIAAKSEAELQLILPPLRKAIRDHIRYCRALAVEVIPEAFGGDSKAAD* |
| Ga0164303_105025292 | 3300012957 | Soil | MTGSSLQDRVRALCFQVTAAKTDAEIRALLPQLQAAIHDHVDYLRAVATEVIPEAFGRPHDIQS* |
| Ga0164301_114907811 | 3300012960 | Soil | MTGSSLQDRVQALCFQVTAAKTDAEIRALLPQLQAAIHNHIDYLRAVATEVIPEAFGRPHDIQS* |
| Ga0164304_109769111 | 3300012986 | Soil | MTGSSLQDRVRALCFQVTAAKTDAELRALLPQLQSAIHDHIDYLRAVAIEVIPEAFGRPHDTQN* |
| Ga0157373_102221623 | 3300013100 | Corn Rhizosphere | MTGYSLQDRVQALCFQVTAAKTDAEIRALLPQLQAAIHDHVDYLRAVATEVIPEAFGRPHDIQS* |
| Ga0157374_104660541 | 3300013296 | Miscanthus Rhizosphere | MTGSSLQDRVQALCFQVTAAKTDAEIRALLPQLQAAIHDHVDYLRAVATEVIP |
| Ga0157378_101389581 | 3300013297 | Miscanthus Rhizosphere | VTGSSLQDRVQALCFQVTAAKTDAEIRALVPQLQAAIHDHIDYLRAVATEVIPEAFGRPHDIQS* |
| Ga0137412_105352532 | 3300015242 | Vadose Zone Soil | MPSSLEDRVRILCAQAVAAESEAEFRIVLPQLQIAIRDHISYLRAIAVDAIPEAFRNDANFAD* |
| Ga0137403_103620571 | 3300015264 | Vadose Zone Soil | MPPSSLEDRVRELCAQAVAAKTEAELRVVLPQLQAAIRDHIRYLRAIAVEVIPEAFGGTVTPQIS* |
| Ga0132258_137924482 | 3300015371 | Arabidopsis Rhizosphere | MTGSSLQDRVRALCFQVTAAKTDAEIRALLPQLQAAIHDHIEYLRAVAIEAIPEAFGRPHDTQN* |
| Ga0132256_1001610133 | 3300015372 | Arabidopsis Rhizosphere | ALCFQVTAAKTDAEIRALLPQLQAAIHDHVDYLRAVATEVIPEAFGRPHDIQS* |
| Ga0132257_1000289424 | 3300015373 | Arabidopsis Rhizosphere | MTGSSLQDRVQALCFQVTAAKTDAEIRALLPQLQAAVHDHIDYLRAVATEVIPEAFGRSHDIQS* |
| Ga0193707_10041011 | 3300019881 | Soil | MRPIPPWQNSSCLVAMPPSSLEERVRDLCAQAAAAKNQADVSLILPKLQAAIRDHVSYLRAIAVEVIPQAFRRDSDSAD |
| Ga0193721_10187612 | 3300020018 | Soil | ERVRDLCAQAAAAKNQADVSLILPKLQAAIRDHVSYLRAIAVEVIPQAFRRDSDSAD |
| Ga0179594_104002342 | 3300020170 | Vadose Zone Soil | LTSSLEDRVRILCAQAVAAESEAEFRIVLPQLQIAIRDHISYLRAIAVDAIPEAFRNDANFAD |
| Ga0210401_101601285 | 3300020583 | Soil | MPPSSLEERVQDLCAQAIAAKSQAELEIILPQLQASIRDHIRYVRIIAADAFGRDSNAA |
| Ga0224712_106867501 | 3300022467 | Corn, Switchgrass And Miscanthus Rhizosphere | RNLPQRTGGPLFLVISMTGSSLQDRVRALCFQVTAAQTDAELRALLPQLQSAIHDHIDYLRAVAIEVIPEAFGRPHDTQN |
| Ga0207680_100915912 | 3300025903 | Switchgrass Rhizosphere | MTGSSLQDRVRALCFQVTAAKTDAEIRALLPQLQAAIHDHIDYLRAVAMEVIPEAFGRPHDTQN |
| Ga0207654_1000134512 | 3300025911 | Corn Rhizosphere | MTGSSLQDRVRALCFQVTAAQTDAELRALLPQLQSAIHDHIDYLRAVAIEVIPEAFGRPHDTQN |
| Ga0207707_101036742 | 3300025912 | Corn Rhizosphere | VISMTGSSLQDRVRALCFQVTAAQTDAELRALLPQLQSAIHDHIDYLRAVAIEVIPEAFGRPHDTQN |
| Ga0207671_100426174 | 3300025914 | Corn Rhizosphere | MTGSSLQDRVRALCFQVTAAKTDAEIRVLLPQLQAAIHDHIDYLRAVAIEVIPEAFGRPHDTQN |
| Ga0207671_103224242 | 3300025914 | Corn Rhizosphere | MTGSSLQDRVQALCFQVTAAKTDAEIRALLPQLQAAIHEHIDYLRAVATEVIPEAFGRPHDIQS |
| Ga0207711_117741442 | 3300025941 | Switchgrass Rhizosphere | MTGSSLQDRVQALCFQVTAAKTDAEIRALLPQLQAAIHDHVDYLRAVATEVIPEAFGRPHDIQS |
| Ga0207679_106387962 | 3300025945 | Corn Rhizosphere | MTGSSLQDRVRALCFQVTAAKTDAEIRALLPQLQAAIHDHVDYLRAVATEVIPEAFGRPHDIQS |
| Ga0207712_113161452 | 3300025961 | Switchgrass Rhizosphere | MTGSSLQDRVRALCFQVTAAKTDAEIRALLPQLQAAIHDHVDYLRAVATEVIPEAFGRPHDTQN |
| Ga0207640_101150051 | 3300025981 | Corn Rhizosphere | MTGSSLQDRVQALCFQVTAAKTDAEIRALLPQLQAAIHDHIDYLRAVAIEVIPEAFGRPHDTQN |
| Ga0207677_102071963 | 3300026023 | Miscanthus Rhizosphere | VTGSSLQDRVQALCFQVTAAKTDAEIRALLPQLQAAIHDHVDYLRAVATEVIPEAFGRPHDIQS |
| Ga0207703_110953501 | 3300026035 | Switchgrass Rhizosphere | MTGSSLQDRVQALCFQVTAAQTDAELRALLPQLQSAIHDHIDYLRAVAIEVIPEAFGRPHDTQN |
| Ga0207648_103780871 | 3300026089 | Miscanthus Rhizosphere | MTGSSLQDRVQALCFQVTAAKTDAEIRALLPQLQAAIHDHVDYLRAVATEVIPEAFGRPHDTQN |
| Ga0207674_106624862 | 3300026116 | Corn Rhizosphere | MTGSSLQDRVRALCFQVTAAKTAAEIRALLPQLQAAIHDHIEYLRAVAIEAIPEAFGRPHDTQN |
| Ga0209180_101342911 | 3300027846 | Vadose Zone Soil | MPPSSLEDRVRESCAQAVAAENEAELRIVLPRLQAAIPDRIRYLRAIAVEAIPEAFGRDSNATD |
| Ga0137415_113814701 | 3300028536 | Vadose Zone Soil | EDRVRELCAQAVAAKTEAELRVVLPQLQAAIRDHIRYLRAIAVEVIPEAFGRDSNAAD |
| Ga0307308_104481151 | 3300028884 | Soil | MPPSSLEDRVRALCAQLAVAKTDAEVNVLLPQLRAAMQDHIRYLRALAVEAIPEAFGHDSNAAD |
| Ga0170824_1058065251 | 3300031231 | Forest Soil | VAFFEASRSFSPVAMPPSSLEDRVRELCAQAVAAKTEAELGVVLPQLQAAIRDHIRHLRAIAVEAIPEAFGRDSNAAD |
| Ga0170820_158934372 | 3300031446 | Forest Soil | MALSAVPPSSLEDRVRDLCTQAIAAKSKAELEFILPQLRIALRDHIRYCRALAVEVIPEVFGSGSNAAD |
| Ga0310813_115588041 | 3300031716 | Soil | MTGSSLQDRVRALCFQVTAAKTDAEIRALLPQLQAAIHDHIEYLRAVAMEVIPEAFGRPHDTQN |
| Ga0307469_108569552 | 3300031720 | Hardwood Forest Soil | MATSSLEERVRGLCAQAIAAKSEAELEFILPQLRQAIQDHIRHCRAVALEVIPRVFGSTNAAD |
| Ga0307469_111046411 | 3300031720 | Hardwood Forest Soil | PQMRHGIVSRVLPVAVPPSSLEDRDRVLCAQGIVAAKTEAELHVVLPQLQTAIQEHVRYLRAIAVEAIPEAFRRDSNAAD |
| Ga0307469_117670971 | 3300031720 | Hardwood Forest Soil | MPPSSLEDRVRELCAQVAAAKTEVELRVILPKLQAAIHDHISYLRAIAVE |
| Ga0307468_1007665872 | 3300031740 | Hardwood Forest Soil | MIGSSLQDRVRELCFQVTAAKTEAEIGALLPQLQAAIHDHINYLRAVAIEVIPEAFRPVDDTRN |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |