Metagenome / Metatranscriptome Family F092471

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F092471
Family Type	Metagenome / Metatranscriptome
Number of Sequences	107
Average Sequence Length	65 residues
Representative Sequence	HFFHPGLVKRAGASTFMCQGDEAPGSVFACEPIGKTALDLGIITSLDIVHSADR
Number of Associated Samples	90
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.80 %
% of genes near scaffold ends (potentially truncated)	85.98 %
% of genes from short scaffolds (< 2000 bps)	98.13 %
Associated GOLD sequencing projects	86
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.22

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (67.290 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (47.664 % of family members)
Environment Ontology (ENVO)	Unclassified (45.794 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (51.402 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 4.88% β-sheet: 9.76% Coil/Unstructured: 85.37%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.22
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.22
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF00108	Thiolase_N	31.78
PF02803	Thiolase_C	4.67
PF00127	Copper-bind	4.67
PF00805	Pentapeptide	3.74
PF05532	CsbD	1.87
PF02746	MR_MLE_N	0.93
PF07171	MlrC_C	0.93
PF00117	GATase	0.93
PF04909	Amidohydro_2	0.93
PF02894	GFO_IDH_MocA_C	0.93
PF01370	Epimerase	0.93
PF02668	TauD	0.93
PF00903	Glyoxalase	0.93
PF01408	GFO_IDH_MocA	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG0183	Acetyl-CoA acetyltransferase	Lipid transport and metabolism [I]	36.45
COG1357	Uncharacterized conserved protein YjbI, contains pentapeptide repeats	Function unknown [S]	3.74
COG3237	Uncharacterized conserved protein YjbJ, UPF0337 family	Function unknown [S]	1.87
COG4948	L-alanine-DL-glutamate epimerase or related enzyme of enolase superfamily	Cell wall/membrane/envelope biogenesis [M]	1.87
COG0673	Predicted dehydrogenase	General function prediction only [R]	0.93
COG2175	Taurine dioxygenase, alpha-ketoglutarate-dependent	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.93
COG5476	Microcystin degradation protein MlrC, contains DUF1485 domain	General function prediction only [R]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	67.29 %
Unclassified	root	N/A	32.71 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	67.29 %
Unclassified	root	N/A	32.71 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	67.29 %
Unclassified	root	N/A	32.71 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	56.07 %
Unclassified	root	N/A	32.71 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.93 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.71 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	18.69 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	7.48 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.93 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.71 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	5.61 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2.80 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.93 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.71 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	1.87 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.93 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.93 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.93 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.71 %
Rhodospirillales bacterium RIFCSPLOWO2_12_FULL_67_15	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium RIFCSPLOWO2_12_FULL_67_15	1.87 %
Herbaspirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Herbaspirillum	0.93 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.93 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.93 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.71 %
Rhodospirillales bacterium RIFCSPLOWO2_12_FULL_67_15	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium RIFCSPLOWO2_12_FULL_67_15	1.87 %
Herbaspirillum rubrisubalbicans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Herbaspirillum → Herbaspirillum rubrisubalbicans	0.93 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.93 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.93 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.93 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459013\|GO6OHWN02FSESF	Not Available	521	Open in IMG/M
3300003223\|JGI26343J46809_1018589	All Organisms → cellular organisms → Bacteria → Proteobacteria	548	Open in IMG/M
3300004091\|Ga0062387_101177420	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300004152\|Ga0062386_101318055	All Organisms → cellular organisms → Bacteria → Proteobacteria	601	Open in IMG/M
3300005171\|Ga0066677_10551380	Not Available	659	Open in IMG/M
3300005363\|Ga0008090_15015341	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	587	Open in IMG/M
3300005435\|Ga0070714_101769107	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	603	Open in IMG/M
3300005436\|Ga0070713_102108310	All Organisms → cellular organisms → Bacteria	546	Open in IMG/M
3300005518\|Ga0070699_101983420	Not Available	532	Open in IMG/M
3300005764\|Ga0066903_104254464	Not Available	766	Open in IMG/M
3300006175\|Ga0070712_101168847	Not Available	669	Open in IMG/M
3300006854\|Ga0075425_102544738	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium RIFCSPLOWO2_12_FULL_67_15	566	Open in IMG/M
3300010048\|Ga0126373_11750610	Not Available	685	Open in IMG/M
3300010048\|Ga0126373_11898480	All Organisms → cellular organisms → Bacteria → Proteobacteria	659	Open in IMG/M
3300010162\|Ga0131853_11049005	Not Available	623	Open in IMG/M
3300010358\|Ga0126370_10274445	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1322	Open in IMG/M
3300010360\|Ga0126372_12375114	Not Available	580	Open in IMG/M
3300010361\|Ga0126378_10249839	All Organisms → cellular organisms → Bacteria	1867	Open in IMG/M
3300010366\|Ga0126379_10432089	All Organisms → cellular organisms → Bacteria → Proteobacteria	1373	Open in IMG/M
3300010376\|Ga0126381_100469328	All Organisms → cellular organisms → Bacteria → Proteobacteria	1769	Open in IMG/M
3300010376\|Ga0126381_101062191	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1169	Open in IMG/M
3300012199\|Ga0137383_10462696	Not Available	929	Open in IMG/M
3300012917\|Ga0137395_10497814	Not Available	877	Open in IMG/M
3300012930\|Ga0137407_12115389	All Organisms → cellular organisms → Bacteria → Proteobacteria	537	Open in IMG/M
3300015264\|Ga0137403_11606081	Not Available	504	Open in IMG/M
3300016270\|Ga0182036_10942296	Not Available	709	Open in IMG/M
3300016270\|Ga0182036_11165295	All Organisms → cellular organisms → Bacteria → Proteobacteria	640	Open in IMG/M
3300016270\|Ga0182036_11174741	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	637	Open in IMG/M
3300016319\|Ga0182033_11651941	All Organisms → cellular organisms → Bacteria → Proteobacteria	580	Open in IMG/M
3300016371\|Ga0182034_11757495	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	546	Open in IMG/M
3300016387\|Ga0182040_11504171	All Organisms → cellular organisms → Bacteria → Proteobacteria	572	Open in IMG/M
3300016445\|Ga0182038_10982293	All Organisms → cellular organisms → Bacteria → Proteobacteria	747	Open in IMG/M
3300018090\|Ga0187770_11440998	All Organisms → cellular organisms → Bacteria → Proteobacteria	560	Open in IMG/M
3300020580\|Ga0210403_10139913	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1976	Open in IMG/M
3300020580\|Ga0210403_10751114	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	778	Open in IMG/M
3300020580\|Ga0210403_11213395	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	580	Open in IMG/M
3300020581\|Ga0210399_11049175	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	654	Open in IMG/M
3300020581\|Ga0210399_11169346	Not Available	612	Open in IMG/M
3300020582\|Ga0210395_11273828	Not Available	539	Open in IMG/M
3300020583\|Ga0210401_11134512	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	640	Open in IMG/M
3300021181\|Ga0210388_11254338	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	627	Open in IMG/M
3300021406\|Ga0210386_11201109	All Organisms → cellular organisms → Bacteria	641	Open in IMG/M
3300021420\|Ga0210394_11338952	Not Available	611	Open in IMG/M
3300021432\|Ga0210384_10257424	All Organisms → cellular organisms → Bacteria	1571	Open in IMG/M
3300021432\|Ga0210384_11408916	Not Available	602	Open in IMG/M
3300021475\|Ga0210392_10732374	All Organisms → cellular organisms → Bacteria	737	Open in IMG/M
3300021476\|Ga0187846_10382989	All Organisms → cellular organisms → Bacteria → Proteobacteria	579	Open in IMG/M
3300021479\|Ga0210410_10543484	All Organisms → cellular organisms → Bacteria → Proteobacteria	1035	Open in IMG/M
3300021479\|Ga0210410_11739366	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300021560\|Ga0126371_12381196	Not Available	640	Open in IMG/M
3300022533\|Ga0242662_10229288	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	595	Open in IMG/M
3300022726\|Ga0242654_10199547	Not Available	695	Open in IMG/M
3300022726\|Ga0242654_10415219	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	519	Open in IMG/M
3300025916\|Ga0207663_11524920	Not Available	538	Open in IMG/M
3300027680\|Ga0207826_1034307	Not Available	1409	Open in IMG/M
3300027783\|Ga0209448_10096661	All Organisms → cellular organisms → Bacteria → Proteobacteria	990	Open in IMG/M
3300027825\|Ga0209039_10075365	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1484	Open in IMG/M
3300027903\|Ga0209488_11109862	Not Available	539	Open in IMG/M
3300028047\|Ga0209526_10744437	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	613	Open in IMG/M
3300031231\|Ga0170824_105481625	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	762	Open in IMG/M
3300031546\|Ga0318538_10189861	Not Available	1095	Open in IMG/M
3300031546\|Ga0318538_10298665	Not Available	868	Open in IMG/M
3300031549\|Ga0318571_10330802	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	580	Open in IMG/M
3300031561\|Ga0318528_10119888	All Organisms → cellular organisms → Bacteria → Proteobacteria	1390	Open in IMG/M
3300031564\|Ga0318573_10274079	Not Available	901	Open in IMG/M
3300031573\|Ga0310915_10096815	All Organisms → cellular organisms → Bacteria → Proteobacteria	1987	Open in IMG/M
3300031573\|Ga0310915_10518645	All Organisms → cellular organisms → Bacteria → Proteobacteria	846	Open in IMG/M
3300031668\|Ga0318542_10427744	All Organisms → cellular organisms → Bacteria → Proteobacteria	685	Open in IMG/M
3300031680\|Ga0318574_10611125	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium RIFCSPLOWO2_12_FULL_67_15	639	Open in IMG/M
3300031681\|Ga0318572_10377935	Not Available	841	Open in IMG/M
3300031713\|Ga0318496_10322689	All Organisms → cellular organisms → Bacteria → Proteobacteria	853	Open in IMG/M
3300031715\|Ga0307476_10539275	All Organisms → cellular organisms → Bacteria	865	Open in IMG/M
3300031718\|Ga0307474_10740969	Not Available	777	Open in IMG/M
3300031736\|Ga0318501_10592335	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Herbaspirillum → Herbaspirillum rubrisubalbicans	608	Open in IMG/M
3300031744\|Ga0306918_10288199	Not Available	1262	Open in IMG/M
3300031744\|Ga0306918_10590583	All Organisms → cellular organisms → Bacteria → Proteobacteria	870	Open in IMG/M
3300031747\|Ga0318502_10391335	Not Available	826	Open in IMG/M
3300031751\|Ga0318494_10613483	All Organisms → cellular organisms → Bacteria → Proteobacteria	636	Open in IMG/M
3300031771\|Ga0318546_11125726	Not Available	552	Open in IMG/M
3300031777\|Ga0318543_10199842	All Organisms → cellular organisms → Bacteria → Proteobacteria	887	Open in IMG/M
3300031795\|Ga0318557_10100654	Not Available	1278	Open in IMG/M
3300031805\|Ga0318497_10329112	Not Available	852	Open in IMG/M
3300031820\|Ga0307473_11287821	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	547	Open in IMG/M
3300031823\|Ga0307478_11047995	All Organisms → cellular organisms → Bacteria → Proteobacteria	681	Open in IMG/M
3300031832\|Ga0318499_10159221	All Organisms → cellular organisms → Bacteria → Proteobacteria	880	Open in IMG/M
3300031845\|Ga0318511_10132670	All Organisms → cellular organisms → Bacteria	1080	Open in IMG/M
3300031859\|Ga0318527_10152478	All Organisms → cellular organisms → Bacteria → Proteobacteria	969	Open in IMG/M
3300031890\|Ga0306925_11447931	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	675	Open in IMG/M
3300031896\|Ga0318551_10931896	All Organisms → cellular organisms → Bacteria → Proteobacteria	507	Open in IMG/M
3300031912\|Ga0306921_10640353	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1226	Open in IMG/M
3300031912\|Ga0306921_11354076	All Organisms → cellular organisms → Bacteria → Proteobacteria	785	Open in IMG/M
3300031942\|Ga0310916_11725016	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	506	Open in IMG/M
3300031946\|Ga0310910_10252545	All Organisms → cellular organisms → Bacteria → Proteobacteria	1380	Open in IMG/M
3300031946\|Ga0310910_10906574	All Organisms → cellular organisms → Bacteria → Proteobacteria	691	Open in IMG/M
3300031947\|Ga0310909_10030948	All Organisms → cellular organisms → Bacteria → Proteobacteria	3969	Open in IMG/M
3300031959\|Ga0318530_10432295	All Organisms → cellular organisms → Bacteria	546	Open in IMG/M
3300031962\|Ga0307479_10542661	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1146	Open in IMG/M
3300032001\|Ga0306922_11289280	Not Available	739	Open in IMG/M
3300032035\|Ga0310911_10505341	All Organisms → cellular organisms → Bacteria → Proteobacteria	701	Open in IMG/M
3300032051\|Ga0318532_10164968	Not Available	787	Open in IMG/M
3300032054\|Ga0318570_10303658	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	726	Open in IMG/M
3300032066\|Ga0318514_10362920	Not Available	768	Open in IMG/M
3300032067\|Ga0318524_10719920	Not Available	527	Open in IMG/M
3300032261\|Ga0306920_100026430	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	8206	Open in IMG/M
3300032261\|Ga0306920_103480995	All Organisms → cellular organisms → Bacteria → Proteobacteria	582	Open in IMG/M
3300032261\|Ga0306920_104148531	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	523	Open in IMG/M
3300033289\|Ga0310914_11067175	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	708	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.13%
Host-Associated	Host-Associated	1.87%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	93.46%
Aquatic	Environmental → Aquatic	4.67%
Arthropoda	Host-Associated → Arthropoda	0.93%
Plants	Host-Associated → Plants	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	92.52%
Freshwater	Environmental → Aquatic → Freshwater	4.67%
Cave	Environmental → Terrestrial → Cave	0.93%
Digestive System	Host-Associated → Arthropoda → Digestive System	0.93%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	83.18%
Loam	Environmental → Terrestrial → Soil → Loam	8.41%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.67%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.93%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.93%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	0.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	68.22%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	13.08%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	4.67%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.67%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.80%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.93%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.93%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.93%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.93%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.93%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	47.66%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	14.95%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	8.41%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	4.67%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.67%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.67%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.74%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.87%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.93%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.93%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.93%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.93%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.93%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.93%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.93%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	0.93%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.93%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.93%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459013	Grass soil microbial communities from Rothamsted Park, UK - July 2010 direct MP BIO 1O1 lysis soil at the rocks surface 0-21cm	Environmental	Open in IMG/M
3300003223	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM2	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010162	Labiotermes labralis P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Lab288 P1 (version 2)	Host-Associated	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300027680	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 80 (SPAdes)	Environmental	Open in IMG/M
3300027783	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027825	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
N57_01835960	2170459013	Grass Soil	LVERWINIPYSRGMIHFLHPVLVNRGGASTFMCRGDEATGSVFTCEPIGKTALDLGVITSLDIVHSGDRPDIRAATGGR
JGI26343J46809_10185892	3300003223	Bog Forest Soil	KRAGVSTFMCQGDEPTGFVFACESIGRTALDLGVVTSLDIVHSADQPEIRAAIGGR*
Ga0062387_1011774202	3300004091	Bog Forest Soil	GLLKRAGVSTFMCQGDEPTGFVFACESIGRTALDLGVVTSLDIVHSADQPEIRAAIGGR*
Ga0062386_1013180551	3300004152	Bog Forest Soil	LVERWINIPYSRGMIHFFHPGLLTRAGVSTFMCQGDEPTGLVFACESIGKTALDLGVVTSLDIVHSADQAEIRAPIGGR*
Ga0066677_105513801	3300005171	Soil	MIHFFHPGLVKRDGASTFMCQGDEAQLSVFACEPIGKTAVDLGIITSLDLVHTADR*
Ga0008090_150153411	3300005363	Tropical Rainforest Soil	VTDPLLVERWINIPYSRGMIHFFHPGLVKHSGASTFLCQGEEAARSIFDCEPVGKTALDLGIITSLEIVRSADH*
Ga0070714_1017691071	3300005435	Agricultural Soil	SRGMIHFFHPGLVKRAAASTFMCQGNESAGSVFACEPIDKTALDLGIITSLDTVHSADR*
Ga0070713_1021083102	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	ERWINIPYSRGMIHFFHPGLVKRAGVSTFMCQGDESASSVFACEPIDKTALDLGMVTSLDIVHSADR*
Ga0070699_1019834201	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	VLVNRGGASTFMCRGDEPTGLVFACEPIAKTALELGIVTSLDIVHSADQPDIRATIGGR*
Ga0066903_1042544641	3300005764	Tropical Forest Soil	NIPYSRGMIHFFHPGLVKRAGASTFFCQGDQSPRSVFDCEPVGKTALDLGIITSLEIIHSADR*
Ga0070712_1011688471	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	YSRGMIHFFHPGLVKRAGASTFMCQGREAPSSVFACEPIGKTALDLGIVTSLDVVHSADR
Ga0075425_1025447382	3300006854	Populus Rhizosphere	SRGMIHFFHPGLVRRADASTFICEGDDAQGSVFACEPIAKTALDLGIVTSLDLVHSADR*
Ga0126373_117506103	3300010048	Tropical Forest Soil	KADPLLVERWINIPHSRGMIHFFHPGLMKHAGASTFLCQGEEAVRSIFDCEPIGETALDLGIVTSLDLVHSADR*
Ga0126373_118984802	3300010048	Tropical Forest Soil	FDSALVSRDGASTFLCQGDEPTRVAFACEPIAKTALDLGVVTSLEIVHSADQAEIRAPNRR*
Ga0131853_110490051	3300010162	Termite Gut	FFHPGLVKRAGVSTFICQGDEAQPTIFDCEPVAETALDLGIITSLDTVHSADH*
Ga0126370_102744451	3300010358	Tropical Forest Soil	IPHSRGMIHFFHPGLVKHAGASTFLCQGEEAVRSIFDCEPVSKTALDLGVITSLDIVRSADR*
Ga0126372_123751142	3300010360	Tropical Forest Soil	MIHFFHPGLVKHAGASTFLCQGEEAVRSIFDCEPIGETALDLGIVTSLDLVHSADR*
Ga0126378_102498394	3300010361	Tropical Forest Soil	MIHFFRPELVKHSGVSTFMCQGNETGSVFSCEPIAETALDLRSVTSLDLVHSTDRWFLLIKTVT*
Ga0126379_104320893	3300010366	Tropical Forest Soil	PGLVNRSGASTFMCQGDEPSGSVFACEPVPKTALNLGIITSLDLVHSADR*
Ga0126381_1004693283	3300010376	Tropical Forest Soil	FHPGLVNRAGASTFFCQGDQSTHSVFYCEPVGKTALDLGIITSLEIIRSADR*
Ga0126381_1010621912	3300010376	Tropical Forest Soil	HFFHPGLVNRAGASTFFCQGDQSPRSVFDCEPVGKTALDLGIITSLEIIHSADH*
Ga0137383_104626961	3300012199	Vadose Zone Soil	IHFFHPGLANRGGASTFMCRGDEPTGPVFACEPIGKTGLELGVVTSLDIVHRADRPDILATIGGR*
Ga0137395_104978141	3300012917	Vadose Zone Soil	GMIHFFHPGLVNRGGASTFMCRGDEPTGPVFACEPIGKTALELGVVTSLDIVHSADRSDISAETGGR*
Ga0137407_121153891	3300012930	Vadose Zone Soil	RGGASTFICQGDEPTRLVFTCEPVFKTALDLGIVTYLDIVRSADRGA*
Ga0137403_116060811	3300015264	Vadose Zone Soil	WINIPLSRGMIHFFHPGPVNRGGASTFMCRGDEPTGPVFACEPIGMTALELGVVTSLDIVHSADRSDISAETGGR*
Ga0182036_109422962	3300016270	Soil	LERAGMSTFMCQGDEPAGLVFACEPIPKTAIDLGVVTSLGIVHGADRPEPGSPIGAR
Ga0182036_111652952	3300016270	Soil	DPQLVERWINIPYGRGMVHFFHPLLVKRGDASTFMCQGDEPTSSVFDCEAIGKTALDLGVVTSLDFVHSADQAEIRAWTGGR
Ga0182036_111747411	3300016270	Soil	MIHFFHPLSVNRGGASTFMCQDEPTGSAFGCEAIGKTALDLGVVTSLEVVHSAHHEEI
Ga0182033_116519411	3300016319	Soil	LLVKRGDASTFMCQGDEPTSSVFNCEAIDKTALDLGVVTSLDFVHSADQAEIRAWTGGR
Ga0182034_117574951	3300016371	Soil	MIHFFHPGLVKRAGASTFICEGDQSPRSVFDCEPVPKTALDLGIITSLDLVHSADR
Ga0182040_115041712	3300016387	Soil	PLLVKRGDASTFMCQGDEPTSSVFDCEAIGKTALDLGVVTSLDFVHSADQEEIRATTGGH
Ga0182038_109822931	3300016445	Soil	RAGMSTFMCQGDEPAGLVFACEPIPKTAIDLGVVTSLDIVHGADRPEPGAPIGAR
Ga0187770_114409982	3300018090	Tropical Peatland	VERWINIPYSRGMIHFFHPGLLKRAGVSTFMCQGDEPTGFVFACESIGKTALDLGVVTSLDIVHSADQAEIRAAIGGR
Ga0210403_101399131	3300020580	Soil	MPVKSERWINIPYSGGMIHFFHPGLVKRAGASTFMCQGDESASSVFACEPIDKTGLDLGIITSLDTVHSADR
Ga0210403_107511142	3300020580	Soil	SSRGMIHFFHPGLVKRAGASTFMCQGDEAQGSLFACEPIGKTALDLGIVTSLDTVHSADR
Ga0210403_112133951	3300020580	Soil	RWINIPSSRGMIHFFHPGLVKRAGASTFMCQGDEAPGSLFDCEPIGKTALDLGIITSLDLVHTADR
Ga0210399_110491752	3300020581	Soil	MIHFFHPGLVRRAGGSTFMCQGDESAGSVFACEPIEKTALDLGIITSLDTVHSADR
Ga0210399_111693461	3300020581	Soil	VLVERWINIPYSRGMIHFFHPGLVKRAGASTFMCQGDELRGSVFACEPITQTALDLGIITSVDIVHSADRESGKLSGARGVRR
Ga0210395_112738281	3300020582	Soil	GLVKRAGASTFMCQGDELRGSVFACEPITQTALDLGIITSVDIVHSADR
Ga0210401_111345122	3300020583	Soil	FHPGLVKRAGASTFMCQGGESAGSIFACEPIDKTALDLGIITSLDTVHSADR
Ga0210388_112543382	3300021181	Soil	MIHFFHPGLVKRAGASTFMCQGEESAGSVFACEPIDKTALDLGIITSLETVHSADR
Ga0210386_112011092	3300021406	Soil	VERWINIPSSRGMIHFFHPKLVKRAGASTFMCQGDEVAGSVFACEPIGKTALDLGIITSLDIVHSADR
Ga0210394_113389522	3300021420	Soil	ADPSLVERWINIPSSRGMIHFFHPGLIKRAGASTFMCQGDESPGSVFACEPIGKTALDLGIITSLDIVHSADR
Ga0210384_102574241	3300021432	Soil	PRALVERWINIPSSRGMIHFFHPGLVKRAGASTFMCQGDEAQGSLFACEPIGKTALDLGIVTSLDTVHSADR
Ga0210384_114089161	3300021432	Soil	VKRAGASTFMCQGDELRGSVFACEPITQTALDLGIITSVDIVHSADRESGKLSGARGVRR
Ga0210392_107323741	3300021475	Soil	KADPSLVERWINIPSSRGMIHFFHPGLIKRAGASTFMCQGDESPGSVFACEPIGKTALDLGIITSLDIVHSADR
Ga0187846_103829892	3300021476	Biofilm	GLLQRAGASTFICQGDEPAGLVFTCESIGRTALDLGVVTSLDIVHSADQAEIRASIGGR
Ga0210410_105434842	3300021479	Soil	MIHFFHPGLVKRAGASTFMCQGEEAPGSVFACEPIDKTALGLGIITSLDTVHSADR
Ga0210410_117393662	3300021479	Soil	HFFHPGLVKRAGASTFMCQGDEAPGSVFACEPIGKTALDLGIITSLDIVHSADR
Ga0126371_123811962	3300021560	Tropical Forest Soil	LVNRSGASTFMCQGDEPSGSVFACEPVPKTALDLGIITSLDLVHSADR
Ga0242662_102292882	3300022533	Soil	ASRPIIMPVKSERWINIPYSGGMIHFFHPGLVKRAGASTFMCQGDESASSVFACEPIDKTGLDLGIITSLDTVHSADR
Ga0242654_101995472	3300022726	Soil	AGRALDQYPVESRMIHFFHPGLVKRAGASTFMCQGEEAPGSVFACEPIDKTALGLGIITSLDTVHSADR
Ga0242654_104152192	3300022726	Soil	FHPGLIKRAGASTFMCQGEESPGSVFACEPIGKTALDLGIITSLDIVHSADR
Ga0207663_115249202	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	SSRGMIHFFHPGLVKRAGASTFMCQGEEAPGSVFACEPIDKTALGLGIITSLDTVHSADR
Ga0207826_10343071	3300027680	Tropical Forest Soil	SRGMIHFFHPGLLRRAGVSTFMCQGDEPTGLVFACEPIGKTALDLGVVTSLDIVHSTDRTEIGAPIGGR
Ga0209448_100966611	3300027783	Bog Forest Soil	FFHPGLLRRAGVSTFMCQGDEPAGLVFACEPIAKTALDLGVVTSLDIVHSADRAEVGAPIGAR
Ga0209039_100753653	3300027825	Bog Forest Soil	INIPHSRGMIHFFHPGLLKRAGVSTFMCQGDEPTGFVFACESIGRTALDLGVVTSLDIVHSADQPEIRAAISGR
Ga0209488_111098622	3300027903	Vadose Zone Soil	HFFHPGLVKRAGASTFMCQGDEAPGSLFACEPIGKTALDLGIVTSLAIVHSADR
Ga0209526_107444371	3300028047	Forest Soil	DPALVDRWINIPSSRGMIHFFHPGLVNRAGASTFMCQGDESSGSVFACEPIGKTALDLGIITSLDIVHSADR
Ga0170824_1054816252	3300031231	Forest Soil	GLVKRAGVSTFMCQGDESPGSVFACEPIGKTALDLGIITSLNIVHSADR
Ga0318538_101898612	3300031546	Soil	IPYSRGMIHFFHPALLKRTGVSTFMCQGDEPTGPVFACEPIGKTALDLGVVTSLDIVHSADRTEIGAPIGGR
Ga0318538_102986652	3300031546	Soil	DPQLVERWINIPYGRGMIHFFQPLLVKRGDASTFMCQGDEPTSSVFDCEAIGKTALDLGVVTSLDIVHSADQGEM
Ga0318571_103308021	3300031549	Soil	MIHFFHPLSVNRGGASTFMCQDEPTGSAFGCEAIGKTALDLGVVTSLEVVHSAHHEEIRATFGGR
Ga0318528_101198882	3300031561	Soil	MIHFFHPLSVNRGGASTFMCQGDEPTGSAFGCEAIGKTALDLGVVTSLEVVHSADHEEIRATFGDR
Ga0318573_102740792	3300031564	Soil	INIPYGRGMIHFFHPLLVKRGDASTFMCQGNEPTSSVFDCEAIGKTALDLGVVTSLDIVHSADQGEM
Ga0310915_100968152	3300031573	Soil	MIHFFHPLSVNRGGASTFMCQDEPTGSAFGCEAIGKTALDLGVVTSLEVVHSADHEEIRATFGDR
Ga0310915_105186453	3300031573	Soil	IHFFHPGLLKRAGASTFMCQGDEPAGLVFACEPITKTALDLGVVTSLDIVHSADRAEPGAPIGAR
Ga0318542_104277441	3300031668	Soil	HFFDPLLVSREGISTFMCQGNEPIGVVFSCEPIGATALDLGVITSLDILHSADQAEIRATNADR
Ga0318574_106111251	3300031680	Soil	FFHPGLVKRAGVSTFICQGDESPPTIFDCEPVAKTALDLGIITSLDTVHSADH
Ga0318572_103779352	3300031681	Soil	INIPLGRGMIHFFDPLLVSREGISTFMCQGNEPIGVVFSCEPIGATALDLGVITSLDILHSADQAEIRATNADR
Ga0318496_103226891	3300031713	Soil	GKADPLLVERWINIPYSRGMIHFFHPGLVKRAGASTFICEGDQSPRSVFDCEPVPKTALDLGIITSLDLVHSADR
Ga0307476_105392752	3300031715	Hardwood Forest Soil	HFFHPKLVKRAGASTFMCQGDEVAGSVFACEPIGKTALDLGIITSLDIVHSADR
Ga0307474_107409692	3300031718	Hardwood Forest Soil	DPQLVERWINIPYSRGMIHFFHPLLVKHGDASTFMCQGDEPTSSVFACEAIGKTALDLGVVTSLDIVHSTDQGEIRAKFGGR
Ga0318501_105923351	3300031736	Soil	GKADPQLVERWIDIPYSRGMIHFFHPGLLKRAGVSTFMCQGDEPAGLVFACEPIAKTAFDLGVVTSLDIVHSADRAEPGAPIGAR
Ga0306918_102881992	3300031744	Soil	PLSVNRGGASTFMCQDEPTGSAFGCEAIGKTALDLGVVTSLEVVHSADHEEIRATFGDR
Ga0306918_105905833	3300031744	Soil	GMIHFFHPGLLKRAGASTFMCQGDEPAGLVFACEPITKTALDLGVVTSLDIVHSADRAEPGAPIGAR
Ga0318502_103913352	3300031747	Soil	IYFFDSALVSRDGASTFLCQGDEPTRVAFACEPIAKTALDLGVVTSLEIVHSADQAEIRAPNRR
Ga0318494_106134832	3300031751	Soil	NIPYGRGMVHFFHPLLVKRGDASTFMCQGDEPTSSVFNCEAIDKTALDLGVVTSLDFVHSADQAEIRAWTGGR
Ga0318546_111257261	3300031771	Soil	VERWINIPHSRGMIHFFHPGLVNRDCASTFMCQGDEPSGSVFACEPVAKTALDLGIITSLDLVHSADR
Ga0318543_101998421	3300031777	Soil	PYSRGMIHFFHPGLLKRAGVSTFMCQGDEPAGLVFACEPIAKTAFDLGVVTSLDIVHSADRAEPGAPIGAR
Ga0318557_101006542	3300031795	Soil	INIPYGRGMIHFFHPLLVKRGDASTFMCQGNEPTSSVFDCEAIGKTALDLGVVTSLDFVHSADQEEIRATTGGH
Ga0318497_103291122	3300031805	Soil	VERWINIPYGRGMIHFFQPLLVKRGDASTFMCQGDEPTSSVFDCEAIGKTALDLGVVTSLDFVHSADQEEIRATTGGH
Ga0307473_112878212	3300031820	Hardwood Forest Soil	MIHFFHPGLVNRAGASTFMCQGDESPGSVFACELIGKTALDLGIITSLDIVHSADR
Ga0307478_110479951	3300031823	Hardwood Forest Soil	VERWINIPYSRGMIHFFHPLLVKHGDASTFMCQGDEPTSSVFACEAIGKTALDLGVVTSLDIVHSTDQGEIRAKFGGR
Ga0318499_101592211	3300031832	Soil	YSRGMIHFFHPELLRRAEVSTFMCQGDEATGLVFACEPIAKTALDLGVVTSLDIVNSADRAEVGAPIGAR
Ga0318511_101326702	3300031845	Soil	MIHFFHPGLVKRAGVSTFICQGDESPPTIFDCEPVAKTALDLGIITSLDTVHSADH
Ga0318527_101524782	3300031859	Soil	YSRGMIHFFHPGLLKRAGVSTFMCQGDEPAGLVFACEPIAKTAFDLGVVTSLDIVHSADRAEPGAPIGAR
Ga0306925_114479312	3300031890	Soil	HPGLVKRAGASTFICEGDQSPRSVFDCEPVPKTALDLGIITSLDLVHSADR
Ga0318551_109318961	3300031896	Soil	IKYSEGKADPLLVERWINIPYSRGMIHFFHPGLVKRAGASTFICEGDQSPRSVFDCEPVPKTALDLGIITSLDLVHSADR
Ga0306921_106403532	3300031912	Soil	INIPYSRGMIHFFHPGLVKRAGASTFICEGDQSPRSVFDCEPVAKTALDLGIITSLDLVHSADR
Ga0306921_113540762	3300031912	Soil	IKYSEGKADPLLVERWINIPYSRGMIHFFHPGLVKRAGASTFICEGDQPPRSVFDCEPVAKTALDLGIITSLDLVHSADR
Ga0310916_117250162	3300031942	Soil	MIHFFHPGLVKRDGVSTFMCQGDERSVFACEPIAKTALDLGIVTSLDLMHSADR
Ga0310910_102525452	3300031946	Soil	GKADPQLVERWINIPYSRGMIHFFHPALLKRTGVSTFMCQGDEPTGPVFACEPIGKTALDLGVVTSLDIVHSADRTEIGAPIGGR
Ga0310910_109065742	3300031946	Soil	SVNRGGASTFMCQDEPTGSAFGCEAIGKTALDLGVVTSLEVVHSADHEEIRATFGDR
Ga0310909_100309484	3300031947	Soil	IHFFQPLLVKRGDASTFMCQGDEPTSSVFDCEAIGKTALDLGVVTSLDFVHSADQEEIRATTGGH
Ga0318530_104322952	3300031959	Soil	NQIHGKADPLLVQRWINIPYSGGMIHFFHPGLVKRAGVSTFICQGDESPPTIFDCEPVAKTALDLGIITSLDTVHSADH
Ga0307479_105426611	3300031962	Hardwood Forest Soil	ELVERWINIPSSRGMIHFFHPGLVKRAGVSTFMCQGDESPGSVFACEPIGKTALDLGIITSLNIVHSADR
Ga0306922_112892801	3300032001	Soil	GMIHFFHPELLRRAEVSTFMCQGDEATGLVFACEPIAKTALDLGVVTSLDIVHSADRAEPGAPTGAR
Ga0310911_105053412	3300032035	Soil	MIHFFHPLLVKRGDASTFMCQGNEPTSSVFDCEAIGKTALDLGVVTSLDIVHSADQGEM
Ga0318532_101649682	3300032051	Soil	MIHFFHPELLRRAEVSTFMCQGDEATGLVFACEPIAKTALDRGVVTSLDIVNSADRAEVGAPIGAR
Ga0318570_103036582	3300032054	Soil	MIHFFHPLSVNRGGASTFMCQDEPTGSAFGCEAIGKTALDLGVVTSLEVVHSADHE
Ga0318514_103629201	3300032066	Soil	VERWINIPYGRGMIHFFQPLLVKRGDASTFMCQGDEPTSSVFNCEAIDKTALDLGVVTSLDFVHSADQAEIRAWTGGR
Ga0318524_107199201	3300032067	Soil	NIPNSRGMIHFFHPGLLKRAGASTFMCQGDEPAGLVFACEPIAKTAFDLGVVTSLDIVHSADRAEPGAPIGAR
Ga0306920_1000264301	3300032261	Soil	LVKRGDASTFMCQGNEPTSSVFDCEAIGKTALDLGVVTSLDIVHSADQGEM
Ga0306920_1034809952	3300032261	Soil	GKADPQLVERWINIPYGRGMIHFFQPLLVKRGDASTFMCQGDEPTSSVFDCEAIGKTALDLGVVTSLDFVHSADQEEIRATTGGH
Ga0306920_1041485312	3300032261	Soil	LLVERWINIPYSRGMIHFFHPGLVKRAGASTFICEGDQSPRSVFDCEPVPKTALDLGIITSLDLVHSADR
Ga0310914_110671752	3300033289	Soil	ERWINIPYSRGMIHFFHPGLVKRAGASTFICEGDQSPRSVFDCEPVPKTALDLGIITSLDLVHSADR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F092471

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences